CAeditome Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: CHD2 (CAeditome ID:1106)

Gene summary for CHD2

check button Gene summary
Gene informationGene symbol

CHD2

Gene ID

1106

Gene namechromodomain helicase DNA binding protein 2
SynonymsDEE94|EEOC
Cytomap

15q26.1

Type of geneprotein-coding
Descriptionchromodomain-helicase-DNA-binding protein 2ATP-dependent helicase CHD2CHD-2
Modification date20210518
UniProtAcc

O14647

Context- 26031915(Mutations in CHD2 cause defective association with active chromatin in chronic lymphocytic leukemia)

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

Top

RNA A-to-I events for CHD2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000173575.17

check button RNA A-to-I editing events in Cancer.
CAediting_1073151(92902768, +), CAediting_1073152(92908850, +), CAediting_1073153(92908855, +), CAediting_1073154(92908863, +), CAediting_1073155(92908864, +), CAediting_1073156(92908890, +), CAediting_1073157(92908932, +), CAediting_1073158(92908933, +), CAediting_1073159(92908935, +), CAediting_1073160(92908943, +), CAediting_1073161(92908972, +), CAediting_1073162(92908998, +), CAediting_1073163(92909030, +), CAediting_1073164(92909031, +), CAediting_1073165(92909039, +), CAediting_1073166(92909040, +), CAediting_1073167(92909521, +), CAediting_1073168(92909651, +), CAediting_1073169(92909665, +), CAediting_1073170(92909680, +), CAediting_1073171(92909715, +), CAediting_1073172(92909768, +), CAediting_1073173(92909791, +), CAediting_1073174(92910110, +), CAediting_1073175(92910146, +), CAediting_1073176(92910172, +), CAediting_1073177(92910462, +), CAediting_1073178(92910493, +), CAediting_1073179(92910529, +), CAediting_1073180(92910532, +), CAediting_1073181(92910576, +), CAediting_1073182(92910605, +), CAediting_1073183(92910616, +), CAediting_1073184(92910632, +), CAediting_1073185(92911466, +), CAediting_1073186(92911482, +), CAediting_1073187(92911483, +), CAediting_1073188(92911488, +), CAediting_1073189(92911513, +), CAediting_1073190(92911528, +), CAediting_1073191(92911551, +), CAediting_1073192(92911552, +), CAediting_1073193(92911560, +), CAediting_1073194(92911587, +), CAediting_1073195(92911588, +), CAediting_1073196(92911591, +), CAediting_1073197(92911617, +), CAediting_1073198(92911618, +), CAediting_1073199(92911620, +), CAediting_1073200(92911630, +), CAediting_1073201(92911640, +), CAediting_1073202(92911670, +), CAediting_1073203(92911676, +), CAediting_1073204(92911680, +), CAediting_1073205(92912457, +), CAediting_1073206(92912608, +), CAediting_1073207(92913531, +), CAediting_1073208(92913600, +), CAediting_1073209(92913601, +), CAediting_1073210(92913670, +), CAediting_1073211(92913687, +), CAediting_1073212(92913718, +), CAediting_1073213(92913731, +), CAediting_1073214(92913793, +), CAediting_1073215(92913807, +), CAediting_1073216(92913840, +), CAediting_1073217(92913841, +), CAediting_1073218(92915404, +), CAediting_1073219(92915411, +), CAediting_1073220(92915459, +), CAediting_1073221(92916573, +), CAediting_1073222(92916585, +), CAediting_1073223(92916610, +), CAediting_1073224(92916617, +), CAediting_1073225(92916623, +), CAediting_1073226(92916634, +), CAediting_1073227(92916666, +), CAediting_1073228(92916683, +), CAediting_1073229(92916684, +), CAediting_1073230(92916737, +), CAediting_1073231(92916826, +), CAediting_1073232(92917281, +), CAediting_1073233(92917383, +), CAediting_1073234(92917440, +), CAediting_1073235(92917441, +), CAediting_1073236(92917450, +), CAediting_1073237(92917467, +), CAediting_1073238(92917470, +), CAediting_1073239(92917478, +), CAediting_1073240(92917500, +), CAediting_1073241(92917506, +), CAediting_1073242(92917511, +), CAediting_1073243(92917516, +), CAediting_1073244(92917545, +), CAediting_1073245(92919493, +), CAediting_1073246(92928594, +), CAediting_1073247(92940182, +), CAediting_1073248(92940198, +), CAediting_1073249(92940199, +), CAediting_1073250(92940344, +), CAediting_1073251(92940402, +), CAediting_1073252(92941244, +), CAediting_1073253(92941254, +), CAediting_1073254(92945461, +), CAediting_1073255(92945492, +), CAediting_1073256(92946510, +), CAediting_1073257(92946587, +), CAediting_1073258(92946616, +), CAediting_1073259(92948578, +), CAediting_1073260(92948579, +), CAediting_1073261(92948667, +), CAediting_1073262(92948718, +), CAediting_1073263(92948724, +), CAediting_1073264(92948821, +), CAediting_1073265(92948823, +), CAediting_1073266(92948826, +), CAediting_1073267(92950591, +), CAediting_1073268(92950592, +), CAediting_1073269(92950593, +), CAediting_1073270(92950596, +), CAediting_1073271(92950598, +), CAediting_1073272(92950623, +), CAediting_1073273(92950643, +), CAediting_1073274(92950673, +), CAediting_1073275(92951226, +), CAediting_1073276(92951264, +), CAediting_1073277(92962142, +), CAediting_1073278(92965489, +), CAediting_1073279(92966316, +), CAediting_1073280(92966647, +), CAediting_1073281(92966649, +), CAediting_1073282(92966682, +), CAediting_1073283(92966734, +), CAediting_1073284(92966735, +), CAediting_1073285(92966746, +), CAediting_1073286(92966750, +), CAediting_1073287(92966761, +), CAediting_1073288(92966799, +), CAediting_1073289(92966830, +), CAediting_1073290(92968244, +), CAediting_1073291(92986750, +), CAediting_1073292(92986796, +), CAediting_1073293(92986816, +), CAediting_1073294(92986857, +), CAediting_1073295(92986861, +), CAediting_1073296(92986865, +), CAediting_1073297(92986873, +), CAediting_1073298(92986877, +), CAediting_1073299(92986927, +), CAediting_1073300(92986972, +), CAediting_1073301(92986988, +), CAediting_1073302(92986998, +), CAediting_1073303(92987334, +), CAediting_1073304(92987343, +), CAediting_1073305(92987348, +), CAediting_1073306(92987364, +), CAediting_1073307(92987365, +), CAediting_1073308(92987369, +), CAediting_1073309(92987383, +), CAediting_1073310(92987399, +), CAediting_1073311(92987402, +), CAediting_1073312(92987414, +), CAediting_1073313(92987416, +), CAediting_1073314(92987422, +), CAediting_1073315(92987424, +), CAediting_1073316(92987435, +), CAediting_1073317(92987438, +), CAediting_1073318(92987439, +), CAediting_1073319(92987440, +), CAediting_1073320(92987441, +), CAediting_1073321(92987442, +), CAediting_1073322(92987444, +), CAediting_1073323(92987448, +), CAediting_1073324(92987449, +), CAediting_1073325(92987450, +), CAediting_1073326(92987451, +), CAediting_1073327(92987454, +), CAediting_1073328(92987470, +), CAediting_1073329(92987474, +), CAediting_1073330(92987480, +), CAediting_1073331(92987486, +), CAediting_1073332(92987518, +), CAediting_1073333(92987527, +), CAediting_1073334(92987528, +), CAediting_1073335(92987532, +), CAediting_1073336(92987535, +), CAediting_1073337(92987540, +), CAediting_1073338(92987549, +), CAediting_1073339(92987553, +), CAediting_1073340(92987568, +), CAediting_1073341(92987571, +), CAediting_1073342(92987572, +), CAediting_1073343(92987573, +), CAediting_1073344(92988126, +), CAediting_1073345(92988136, +), CAediting_1073346(92988138, +), CAediting_1073347(92988176, +), CAediting_1073348(92988200, +), CAediting_1073349(92988209, +), CAediting_1073350(92988212, +), CAediting_1073351(92988217, +), CAediting_1073352(92988222, +), CAediting_1073353(92988282, +), CAediting_1073354(92988359, +), CAediting_1073355(92993671, +), CAediting_1073356(92993687, +), CAediting_1073357(92993688, +), CAediting_1073358(92993741, +), CAediting_1073359(92993812, +), CAediting_1073360(92993827, +), CAediting_1073361(92993828, +), CAediting_1073362(92993833, +), CAediting_1073363(92993850, +), CAediting_1073364(92993937, +), CAediting_1073365(92996203, +), CAediting_1073366(92996224, +), CAediting_1073367(92996277, +), CAediting_1073368(92996317, +), CAediting_1073369(92996367, +), CAediting_1073370(92998969, +), CAediting_1073371(92999004, +), CAediting_1073372(92999005, +), CAediting_1073373(92999064, +), CAediting_1073374(93000044, +), CAediting_1073375(93000115, +), CAediting_1073376(93000186, +), CAediting_1073377(93000198, +), CAediting_1073378(93000998, +), CAediting_1073379(93001650, +), CAediting_1073380(93003138, +), CAediting_1073381(93003204, +), CAediting_1073382(93003848, +), CAediting_1073383(93003854, +), CAediting_1073384(93003864, +), CAediting_1073385(93003974, +), CAediting_1073386(93015140, +), CAediting_1073387(93015142, +), CAediting_1073388(93015143, +), CAediting_1073389(93015159, +), CAediting_1073390(93015178, +), CAediting_1073391(93015196, +), CAediting_1073392(93015208, +), CAediting_1073393(93015251, +), CAediting_1073394(93015341, +), CAediting_1073395(93016610, +), CAediting_1073396(93016623, +), CAediting_1073397(93016626, +), CAediting_1073398(93016628, +), CAediting_1073399(93016640, +), CAediting_1073400(93016650, +), CAediting_1073401(93016661, +), CAediting_1073402(93016667, +), CAediting_1073403(93016701, +), CAediting_1073404(93016727, +), CAediting_1073405(93016731, +), CAediting_1073406(93016739, +), CAediting_1073407(93019684, +), CAediting_1073408(93019738, +), CAediting_1073409(93019748, +), CAediting_1073410(93019758, +), CAediting_1073411(93019859, +), CAediting_1073412(93019883, +), CAediting_1073413(93027235, +), CAediting_1073414(93027252, +),

Top

RNA editing positional annotations for CHD2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1073151chr15_92902768_+ncRNA_intronic
CAediting_1073152chr15_92908850_+ncRNA_intronic
CAediting_1073153chr15_92908855_+ncRNA_intronic
CAediting_1073154chr15_92908863_+ncRNA_intronic
CAediting_1073155chr15_92908864_+ncRNA_intronic
CAediting_1073156chr15_92908890_+ncRNA_intronic
CAediting_1073157chr15_92908932_+ncRNA_intronic
CAediting_1073158chr15_92908933_+ncRNA_intronic
CAediting_1073159chr15_92908935_+ncRNA_intronic
CAediting_1073160chr15_92908943_+ncRNA_intronic
CAediting_1073161chr15_92908972_+ncRNA_intronic
CAediting_1073162chr15_92908998_+ncRNA_intronic
CAediting_1073163chr15_92909030_+ncRNA_intronic
CAediting_1073164chr15_92909031_+ncRNA_intronic
CAediting_1073165chr15_92909039_+ncRNA_intronic
CAediting_1073166chr15_92909040_+ncRNA_intronic
CAediting_1073167chr15_92909521_+ncRNA_intronic
CAediting_1073168chr15_92909651_+ncRNA_intronic
CAediting_1073169chr15_92909665_+ncRNA_intronic
CAediting_1073170chr15_92909680_+ncRNA_intronic
CAediting_1073171chr15_92909715_+ncRNA_intronic
CAediting_1073172chr15_92909768_+ncRNA_intronic
CAediting_1073173chr15_92909791_+ncRNA_intronic
CAediting_1073174chr15_92910110_+ncRNA_intronic
CAediting_1073175chr15_92910146_+ncRNA_intronic
CAediting_1073176chr15_92910172_+ncRNA_intronic
CAediting_1073177chr15_92910462_+ncRNA_intronic
CAediting_1073178chr15_92910493_+ncRNA_intronic
CAediting_1073179chr15_92910529_+ncRNA_intronic
CAediting_1073180chr15_92910532_+ncRNA_intronic
CAediting_1073181chr15_92910576_+ncRNA_intronic
CAediting_1073182chr15_92910605_+ncRNA_intronic
CAediting_1073183chr15_92910616_+ncRNA_intronic
CAediting_1073184chr15_92910632_+ncRNA_intronic
CAediting_1073185chr15_92911466_+ncRNA_intronic
CAediting_1073186chr15_92911482_+ncRNA_intronic
CAediting_1073187chr15_92911483_+ncRNA_intronic
CAediting_1073188chr15_92911488_+ncRNA_intronic
CAediting_1073189chr15_92911513_+ncRNA_intronic
CAediting_1073190chr15_92911528_+ncRNA_intronic
CAediting_1073191chr15_92911551_+ncRNA_intronic
CAediting_1073192chr15_92911552_+ncRNA_intronic
CAediting_1073193chr15_92911560_+ncRNA_intronic
CAediting_1073194chr15_92911587_+ncRNA_intronic
CAediting_1073195chr15_92911588_+ncRNA_intronic
CAediting_1073196chr15_92911591_+ncRNA_intronic
CAediting_1073197chr15_92911617_+ncRNA_intronic
CAediting_1073198chr15_92911618_+ncRNA_intronic
CAediting_1073199chr15_92911620_+ncRNA_intronic
CAediting_1073200chr15_92911630_+ncRNA_intronic
CAediting_1073201chr15_92911640_+ncRNA_intronic
CAediting_1073202chr15_92911670_+ncRNA_intronic
CAediting_1073203chr15_92911676_+ncRNA_intronic
CAediting_1073204chr15_92911680_+ncRNA_intronic
CAediting_1073205chr15_92912457_+ncRNA_intronic
CAediting_1073206chr15_92912608_+ncRNA_intronic
CAediting_1073207chr15_92913531_+ncRNA_intronic
CAediting_1073208chr15_92913600_+ncRNA_intronic
CAediting_1073209chr15_92913601_+ncRNA_intronic
CAediting_1073210chr15_92913670_+ncRNA_intronic
CAediting_1073211chr15_92913687_+ncRNA_intronic
CAediting_1073212chr15_92913718_+ncRNA_intronic
CAediting_1073213chr15_92913731_+ncRNA_intronic
CAediting_1073214chr15_92913793_+ncRNA_intronic
CAediting_1073215chr15_92913807_+ncRNA_intronic
CAediting_1073216chr15_92913840_+ncRNA_intronic
CAediting_1073217chr15_92913841_+ncRNA_intronic
CAediting_1073218chr15_92915404_+ncRNA_intronic
CAediting_1073219chr15_92915411_+ncRNA_intronic
CAediting_1073220chr15_92915459_+ncRNA_intronic
CAediting_1073221chr15_92916573_+ncRNA_intronic
CAediting_1073222chr15_92916585_+ncRNA_intronic
CAediting_1073223chr15_92916610_+ncRNA_intronic
CAediting_1073224chr15_92916617_+ncRNA_intronic
CAediting_1073225chr15_92916623_+ncRNA_intronic
CAediting_1073226chr15_92916634_+ncRNA_intronic
CAediting_1073227chr15_92916666_+ncRNA_intronic
CAediting_1073228chr15_92916683_+ncRNA_intronic
CAediting_1073229chr15_92916684_+ncRNA_intronic
CAediting_1073230chr15_92916737_+ncRNA_intronic
CAediting_1073231chr15_92916826_+ncRNA_intronic
CAediting_1073232chr15_92917281_+ncRNA_intronic
CAediting_1073233chr15_92917383_+ncRNA_intronic
CAediting_1073234chr15_92917440_+ncRNA_intronic
CAediting_1073235chr15_92917441_+ncRNA_intronic
CAediting_1073236chr15_92917450_+ncRNA_intronic
CAediting_1073237chr15_92917467_+ncRNA_intronic
CAediting_1073238chr15_92917470_+ncRNA_intronic
CAediting_1073239chr15_92917478_+ncRNA_intronic
CAediting_1073240chr15_92917500_+ncRNA_intronic
CAediting_1073241chr15_92917506_+ncRNA_intronic
CAediting_1073242chr15_92917511_+ncRNA_intronic
CAediting_1073243chr15_92917516_+ncRNA_intronic
CAediting_1073244chr15_92917545_+ncRNA_intronic
CAediting_1073245chr15_92919493_+ncRNA_intronic
CAediting_1073246chr15_92928594_+ncRNA_intronic
CAediting_1073247chr15_92940182_+ncRNA_intronic
CAediting_1073248chr15_92940198_+ncRNA_intronic
CAediting_1073249chr15_92940199_+ncRNA_intronic
CAediting_1073250chr15_92940344_+ncRNA_intronic
CAediting_1073251chr15_92940402_+ncRNA_intronic
CAediting_1073252chr15_92941244_+ncRNA_intronic
CAediting_1073253chr15_92941254_+ncRNA_intronic
CAediting_1073254chr15_92945461_+ncRNA_exonic
CAediting_1073255chr15_92945492_+ncRNA_exonic
CAediting_1073256chr15_92946510_+ncRNA_intronic
CAediting_1073257chr15_92946587_+ncRNA_intronic
CAediting_1073258chr15_92946616_+ncRNA_intronic
CAediting_1073259chr15_92948578_+ncRNA_intronic
CAediting_1073260chr15_92948579_+ncRNA_intronic
CAediting_1073261chr15_92948667_+ncRNA_intronic
CAediting_1073262chr15_92948718_+ncRNA_intronic
CAediting_1073263chr15_92948724_+ncRNA_intronic
CAediting_1073264chr15_92948821_+ncRNA_intronic
CAediting_1073265chr15_92948823_+ncRNA_intronic
CAediting_1073266chr15_92948826_+ncRNA_intronic
CAediting_1073267chr15_92950591_+ncRNA_intronic
CAediting_1073268chr15_92950592_+ncRNA_intronic
CAediting_1073269chr15_92950593_+ncRNA_intronic
CAediting_1073270chr15_92950596_+ncRNA_intronic
CAediting_1073271chr15_92950598_+ncRNA_intronic
CAediting_1073272chr15_92950623_+ncRNA_intronic
CAediting_1073273chr15_92950643_+ncRNA_intronic
CAediting_1073274chr15_92950673_+ncRNA_intronic
CAediting_1073275chr15_92951226_+ncRNA_intronic
CAediting_1073276chr15_92951264_+ncRNA_intronic
CAediting_1073277chr15_92962142_+ncRNA_intronic
CAediting_1073278chr15_92965489_+ncRNA_intronic
CAediting_1073279chr15_92966316_+ncRNA_intronic
CAediting_1073280chr15_92966647_+ncRNA_intronic
CAediting_1073281chr15_92966649_+ncRNA_intronic
CAediting_1073282chr15_92966682_+ncRNA_intronic
CAediting_1073283chr15_92966734_+ncRNA_intronic
CAediting_1073284chr15_92966735_+ncRNA_intronic
CAediting_1073285chr15_92966746_+ncRNA_intronic
CAediting_1073286chr15_92966750_+ncRNA_intronic
CAediting_1073287chr15_92966761_+ncRNA_intronic
CAediting_1073288chr15_92966799_+ncRNA_intronic
CAediting_1073289chr15_92966830_+ncRNA_intronic
CAediting_1073290chr15_92968244_+intronic
CAediting_1073291chr15_92986750_+intronic
CAediting_1073292chr15_92986796_+intronic
CAediting_1073293chr15_92986816_+intronic
CAediting_1073294chr15_92986857_+intronic
CAediting_1073295chr15_92986861_+intronic
CAediting_1073296chr15_92986865_+intronic
CAediting_1073297chr15_92986873_+intronic
CAediting_1073298chr15_92986877_+intronic
CAediting_1073299chr15_92986927_+intronic
CAediting_1073300chr15_92986972_+intronic
CAediting_1073301chr15_92986988_+intronic
CAediting_1073302chr15_92986998_+intronic
CAediting_1073303chr15_92987334_+intronic
CAediting_1073304chr15_92987343_+intronic
CAediting_1073305chr15_92987348_+intronic
CAediting_1073306chr15_92987364_+intronic
CAediting_1073307chr15_92987365_+intronic
CAediting_1073308chr15_92987369_+intronic
CAediting_1073309chr15_92987383_+intronic
CAediting_1073310chr15_92987399_+intronic
CAediting_1073311chr15_92987402_+intronic
CAediting_1073312chr15_92987414_+intronic
CAediting_1073313chr15_92987416_+intronic
CAediting_1073314chr15_92987422_+intronic
CAediting_1073315chr15_92987424_+intronic
CAediting_1073316chr15_92987435_+intronic
CAediting_1073317chr15_92987438_+intronic
CAediting_1073318chr15_92987439_+intronic
CAediting_1073319chr15_92987440_+intronic
CAediting_1073320chr15_92987441_+intronic
CAediting_1073321chr15_92987442_+intronic
CAediting_1073322chr15_92987444_+intronic
CAediting_1073323chr15_92987448_+intronic
CAediting_1073324chr15_92987449_+intronic
CAediting_1073325chr15_92987450_+intronic
CAediting_1073326chr15_92987451_+intronic
CAediting_1073327chr15_92987454_+intronic
CAediting_1073328chr15_92987470_+intronic
CAediting_1073329chr15_92987474_+intronic
CAediting_1073330chr15_92987480_+intronic
CAediting_1073331chr15_92987486_+intronic
CAediting_1073332chr15_92987518_+intronic
CAediting_1073333chr15_92987527_+intronic
CAediting_1073334chr15_92987528_+intronic
CAediting_1073335chr15_92987532_+intronic
CAediting_1073336chr15_92987535_+intronic
CAediting_1073337chr15_92987540_+intronic
CAediting_1073338chr15_92987549_+intronic
CAediting_1073339chr15_92987553_+intronic
CAediting_1073340chr15_92987568_+intronic
CAediting_1073341chr15_92987571_+intronic
CAediting_1073342chr15_92987572_+intronic
CAediting_1073343chr15_92987573_+intronic
CAediting_1073344chr15_92988126_+intronic
CAediting_1073345chr15_92988136_+intronic
CAediting_1073346chr15_92988138_+intronic
CAediting_1073347chr15_92988176_+intronic
CAediting_1073348chr15_92988200_+intronic
CAediting_1073349chr15_92988209_+intronic
CAediting_1073350chr15_92988212_+intronic
CAediting_1073351chr15_92988217_+intronic
CAediting_1073352chr15_92988222_+intronic
CAediting_1073353chr15_92988282_+intronic
CAediting_1073354chr15_92988359_+intronic
CAediting_1073355chr15_92993671_+intronic
CAediting_1073356chr15_92993687_+intronic
CAediting_1073357chr15_92993688_+intronic
CAediting_1073358chr15_92993741_+intronic
CAediting_1073359chr15_92993812_+intronic
CAediting_1073360chr15_92993827_+intronic
CAediting_1073361chr15_92993828_+intronic
CAediting_1073362chr15_92993833_+intronic
CAediting_1073363chr15_92993850_+intronic
CAediting_1073364chr15_92993937_+intronic
CAediting_1073365chr15_92996203_+intronic
CAediting_1073366chr15_92996224_+intronic
CAediting_1073367chr15_92996277_+intronic
CAediting_1073368chr15_92996317_+intronic
CAediting_1073369chr15_92996367_+intronic
CAediting_1073370chr15_92998969_+intronic
CAediting_1073371chr15_92999004_+intronic
CAediting_1073372chr15_92999005_+intronic
CAediting_1073373chr15_92999064_+intronic
CAediting_1073374chr15_93000044_+intronic
CAediting_1073375chr15_93000115_+intronic
CAediting_1073376chr15_93000186_+intronic
CAediting_1073377chr15_93000198_+intronic
CAediting_1073378chr15_93000998_+intronic
CAediting_1073379chr15_93001650_+intronic
CAediting_1073380chr15_93003138_+intronic
CAediting_1073381chr15_93003204_+intronic
CAediting_1073382chr15_93003848_+intronic
CAediting_1073383chr15_93003854_+intronic
CAediting_1073384chr15_93003864_+intronic
CAediting_1073385chr15_93003974_+intronic
CAediting_1073386chr15_93015140_+intronic
CAediting_1073387chr15_93015142_+intronic
CAediting_1073388chr15_93015143_+intronic
CAediting_1073389chr15_93015159_+intronic
CAediting_1073390chr15_93015178_+intronic
CAediting_1073391chr15_93015196_+intronic
CAediting_1073392chr15_93015208_+intronic
CAediting_1073393chr15_93015251_+intronic
CAediting_1073394chr15_93015341_+intronic
CAediting_1073395chr15_93016610_+intronic
CAediting_1073396chr15_93016623_+intronic
CAediting_1073397chr15_93016626_+intronic
CAediting_1073398chr15_93016628_+intronic
CAediting_1073399chr15_93016640_+intronic
CAediting_1073400chr15_93016650_+intronic
CAediting_1073401chr15_93016661_+intronic
CAediting_1073402chr15_93016667_+intronic
CAediting_1073403chr15_93016701_+intronic
CAediting_1073404chr15_93016727_+intronic
CAediting_1073405chr15_93016731_+intronic
CAediting_1073406chr15_93016739_+intronic
CAediting_1073407chr15_93019684_+intronic
CAediting_1073408chr15_93019738_+intronic
CAediting_1073409chr15_93019748_+intronic
CAediting_1073410chr15_93019758_+intronic
CAediting_1073411chr15_93019859_+intronic
CAediting_1073412chr15_93019883_+intronic
CAediting_1073413chr15_93027235_+UTR3
CAediting_1073414chr15_93027252_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1073152chr15_92908850_+SINEAluAluSx1
CAediting_1073153chr15_92908855_+SINEAluAluSx1
CAediting_1073154chr15_92908863_+SINEAluAluSx1
CAediting_1073155chr15_92908864_+SINEAluAluSx1
CAediting_1073156chr15_92908890_+SINEAluAluSx1
CAediting_1073157chr15_92908932_+SINEAluAluSx1
CAediting_1073158chr15_92908933_+SINEAluAluSx1
CAediting_1073159chr15_92908935_+SINEAluAluSx1
CAediting_1073160chr15_92908943_+SINEAluAluSx1
CAediting_1073161chr15_92908972_+SINEAluAluSx1
CAediting_1073162chr15_92908998_+SINEAluAluSx1
CAediting_1073163chr15_92909030_+SINEAluAluSx1
CAediting_1073164chr15_92909031_+SINEAluAluSx1
CAediting_1073165chr15_92909039_+SINEAluAluSx1
CAediting_1073166chr15_92909040_+SINEAluAluSx1
CAediting_1073167chr15_92909521_+SINEAluAluYk11
CAediting_1073168chr15_92909651_+SINEAluAluJb
CAediting_1073169chr15_92909665_+SINEAluAluJb
CAediting_1073170chr15_92909680_+SINEAluAluJb
CAediting_1073171chr15_92909715_+SINEAluAluJb
CAediting_1073172chr15_92909768_+SINEAluAluJb
CAediting_1073173chr15_92909791_+SINEAluAluJb
CAediting_1073174chr15_92910110_+SINEAluAluSx3
CAediting_1073175chr15_92910146_+SINEAluAluSx3
CAediting_1073176chr15_92910172_+SINEAluAluSx3
CAediting_1073177chr15_92910462_+SINEAluAluSz
CAediting_1073178chr15_92910493_+SINEAluAluSz
CAediting_1073179chr15_92910529_+SINEAluAluSz
CAediting_1073180chr15_92910532_+SINEAluAluSz
CAediting_1073181chr15_92910576_+SINEAluAluSz
CAediting_1073182chr15_92910605_+SINEAluAluSz
CAediting_1073183chr15_92910616_+SINEAluAluSz
CAediting_1073184chr15_92910632_+SINEAluAluSz
CAediting_1073185chr15_92911466_+SINEAluAluSz6
CAediting_1073186chr15_92911482_+SINEAluAluSz6
CAediting_1073187chr15_92911483_+SINEAluAluSz6
CAediting_1073188chr15_92911488_+SINEAluAluSz6
CAediting_1073189chr15_92911513_+SINEAluAluSz6
CAediting_1073190chr15_92911528_+SINEAluAluSz6
CAediting_1073191chr15_92911551_+SINEAluAluSz6
CAediting_1073192chr15_92911552_+SINEAluAluSz6
CAediting_1073193chr15_92911560_+SINEAluAluSz6
CAediting_1073194chr15_92911587_+SINEAluAluSz6
CAediting_1073195chr15_92911588_+SINEAluAluSz6
CAediting_1073196chr15_92911591_+SINEAluAluSz6
CAediting_1073197chr15_92911617_+SINEAluAluSz6
CAediting_1073198chr15_92911618_+SINEAluAluSz6
CAediting_1073199chr15_92911620_+SINEAluAluSz6
CAediting_1073200chr15_92911630_+SINEAluAluSz6
CAediting_1073201chr15_92911640_+SINEAluAluSz6
CAediting_1073202chr15_92911670_+SINEAluAluSz6
CAediting_1073203chr15_92911676_+SINEAluAluSz6
CAediting_1073204chr15_92911680_+SINEAluAluSz6
CAediting_1073205chr15_92912457_+SINEAluAluSx
CAediting_1073206chr15_92912608_+SINEAluAluSx3
CAediting_1073207chr15_92913531_+DNAhAT-CharlieMER20
CAediting_1073208chr15_92913600_+SINEAluAluJr
CAediting_1073209chr15_92913601_+SINEAluAluJr
CAediting_1073210chr15_92913670_+SINEAluAluJr
CAediting_1073211chr15_92913687_+SINEAluAluJr
CAediting_1073212chr15_92913718_+SINEAluAluJr
CAediting_1073213chr15_92913731_+SINEAluAluJr
CAediting_1073214chr15_92913793_+SINEAluAluJr
CAediting_1073215chr15_92913807_+SINEAluAluJr
CAediting_1073216chr15_92913840_+SINEAluAluJr
CAediting_1073217chr15_92913841_+SINEAluAluJr
CAediting_1073218chr15_92915404_+SINEAluAluY
CAediting_1073219chr15_92915411_+SINEAluAluY
CAediting_1073220chr15_92915459_+SINEAluAluY
CAediting_1073221chr15_92916573_+SINEAluAluSc5
CAediting_1073222chr15_92916585_+SINEAluAluSc5
CAediting_1073223chr15_92916610_+SINEAluAluSc5
CAediting_1073224chr15_92916617_+SINEAluAluSc5
CAediting_1073225chr15_92916623_+SINEAluAluSc5
CAediting_1073226chr15_92916634_+SINEAluAluSc5
CAediting_1073227chr15_92916666_+SINEAluAluSc5
CAediting_1073228chr15_92916683_+SINEAluAluSc5
CAediting_1073229chr15_92916684_+SINEAluAluSc5
CAediting_1073230chr15_92916737_+SINEAluAluSc5
CAediting_1073231chr15_92916826_+SINEAluAluSc5
CAediting_1073232chr15_92917281_+SINEAluAluSx
CAediting_1073233chr15_92917383_+SINEAluAluSx
CAediting_1073234chr15_92917440_+SINEAluAluSx
CAediting_1073235chr15_92917441_+SINEAluAluSx
CAediting_1073236chr15_92917450_+SINEAluAluSx
CAediting_1073237chr15_92917467_+SINEAluAluSx
CAediting_1073238chr15_92917470_+SINEAluAluSx
CAediting_1073239chr15_92917478_+SINEAluAluSx
CAediting_1073240chr15_92917500_+SINEAluAluSx
CAediting_1073241chr15_92917506_+SINEAluAluSx
CAediting_1073242chr15_92917511_+SINEAluAluSx
CAediting_1073243chr15_92917516_+SINEAluAluSx
CAediting_1073244chr15_92917545_+SINEAluAluSx
CAediting_1073245chr15_92919493_+SINEAluAluSc8
CAediting_1073246chr15_92928594_+DNAhAT-CharlieMER3
CAediting_1073247chr15_92940182_+SINEAluAluJo
CAediting_1073248chr15_92940198_+SINEAluAluJo
CAediting_1073249chr15_92940199_+SINEAluAluJo
CAediting_1073250chr15_92940344_+SINEAluAluJo
CAediting_1073251chr15_92940402_+SINEAluAluJo
CAediting_1073252chr15_92941244_+SINEAluAluSg
CAediting_1073253chr15_92941254_+SINEAluAluSg
CAediting_1073254chr15_92945461_+SINEAluAluSx1
CAediting_1073255chr15_92945492_+SINEAluAluSx1
CAediting_1073256chr15_92946510_+SINEAluAluSz
CAediting_1073257chr15_92946587_+SINEAluAluSz
CAediting_1073258chr15_92946616_+SINEAluAluSz
CAediting_1073259chr15_92948578_+SINEAluAluY
CAediting_1073260chr15_92948579_+SINEAluAluY
CAediting_1073261chr15_92948667_+SINEAluAluY
CAediting_1073262chr15_92948718_+SINEAluAluY
CAediting_1073263chr15_92948724_+SINEAluAluY
CAediting_1073264chr15_92948821_+SINEAluAluY
CAediting_1073265chr15_92948823_+SINEAluAluY
CAediting_1073266chr15_92948826_+SINEAluAluY
CAediting_1073267chr15_92950591_+SINEAluAluJb
CAediting_1073268chr15_92950592_+SINEAluAluJb
CAediting_1073269chr15_92950593_+SINEAluAluJb
CAediting_1073270chr15_92950596_+SINEAluAluJb
CAediting_1073271chr15_92950598_+SINEAluAluJb
CAediting_1073272chr15_92950623_+SINEAluAluJb
CAediting_1073273chr15_92950643_+SINEAluAluJb
CAediting_1073274chr15_92950673_+SINEAluAluJb
CAediting_1073275chr15_92951226_+SINEAluAluSz
CAediting_1073276chr15_92951264_+SINEAluAluSz
CAediting_1073277chr15_92962142_+SINEAluAluSq4
CAediting_1073278chr15_92965489_+SINEAluAluY
CAediting_1073279chr15_92966316_+SINEAluAluSx1
CAediting_1073280chr15_92966647_+SINEAluAluSz
CAediting_1073281chr15_92966649_+SINEAluAluSz
CAediting_1073282chr15_92966682_+SINEAluAluSz
CAediting_1073283chr15_92966734_+SINEAluAluSz
CAediting_1073284chr15_92966735_+SINEAluAluSz
CAediting_1073285chr15_92966746_+SINEAluAluSz
CAediting_1073286chr15_92966750_+SINEAluAluSz
CAediting_1073287chr15_92966761_+SINEAluAluSz
CAediting_1073288chr15_92966799_+SINEAluAluSz
CAediting_1073289chr15_92966830_+SINEAluAluSz
CAediting_1073290chr15_92968244_+SINEAluFLAM_C
CAediting_1073291chr15_92986750_+SINEAluAluJr4
CAediting_1073292chr15_92986796_+SINEAluAluJr4
CAediting_1073293chr15_92986816_+SINEAluAluJr4
CAediting_1073294chr15_92986857_+SINEAluAluJr4
CAediting_1073295chr15_92986861_+SINEAluAluJr4
CAediting_1073296chr15_92986865_+SINEAluAluJr4
CAediting_1073297chr15_92986873_+SINEAluAluJr4
CAediting_1073298chr15_92986877_+SINEAluAluJr4
CAediting_1073299chr15_92986927_+SINEAluAluJr4
CAediting_1073300chr15_92986972_+SINEAluAluJr4
CAediting_1073301chr15_92986988_+SINEAluAluJr4
CAediting_1073302chr15_92986998_+SINEAluAluJr4
CAediting_1073303chr15_92987334_+SINEAluAluSz6
CAediting_1073304chr15_92987343_+SINEAluAluSz6
CAediting_1073305chr15_92987348_+SINEAluAluSz6
CAediting_1073306chr15_92987364_+SINEAluAluSz6
CAediting_1073307chr15_92987365_+SINEAluAluSz6
CAediting_1073308chr15_92987369_+SINEAluAluSz6
CAediting_1073309chr15_92987383_+SINEAluAluSz6
CAediting_1073310chr15_92987399_+SINEAluAluSz6
CAediting_1073311chr15_92987402_+SINEAluAluSz6
CAediting_1073312chr15_92987414_+SINEAluAluSz6
CAediting_1073313chr15_92987416_+SINEAluAluSz6
CAediting_1073314chr15_92987422_+SINEAluAluSz6
CAediting_1073315chr15_92987424_+SINEAluAluSz6
CAediting_1073316chr15_92987435_+SINEAluAluSz6
CAediting_1073317chr15_92987438_+SINEAluAluSz6
CAediting_1073318chr15_92987439_+SINEAluAluSz6
CAediting_1073319chr15_92987440_+SINEAluAluSz6
CAediting_1073320chr15_92987441_+SINEAluAluSz6
CAediting_1073321chr15_92987442_+SINEAluAluSz6
CAediting_1073322chr15_92987444_+SINEAluAluSz6
CAediting_1073323chr15_92987448_+SINEAluAluSz6
CAediting_1073324chr15_92987449_+SINEAluAluSz6
CAediting_1073325chr15_92987450_+SINEAluAluSz6
CAediting_1073326chr15_92987451_+SINEAluAluSz6
CAediting_1073327chr15_92987454_+SINEAluAluSz6
CAediting_1073328chr15_92987470_+SINEAluAluSz6
CAediting_1073329chr15_92987474_+SINEAluAluSz6
CAediting_1073330chr15_92987480_+SINEAluAluSz6
CAediting_1073331chr15_92987486_+SINEAluAluSz6
CAediting_1073332chr15_92987518_+SINEAluAluSz6
CAediting_1073333chr15_92987527_+SINEAluAluSz6
CAediting_1073334chr15_92987528_+SINEAluAluSz6
CAediting_1073335chr15_92987532_+SINEAluAluSz6
CAediting_1073336chr15_92987535_+SINEAluAluSz6
CAediting_1073337chr15_92987540_+SINEAluAluSz6
CAediting_1073338chr15_92987549_+SINEAluAluSz6
CAediting_1073339chr15_92987553_+SINEAluAluSz6
CAediting_1073340chr15_92987568_+SINEAluAluSz6
CAediting_1073341chr15_92987571_+SINEAluAluSz6
CAediting_1073342chr15_92987572_+SINEAluAluSz6
CAediting_1073343chr15_92987573_+SINEAluAluSz6
CAediting_1073344chr15_92988126_+SINEAluAluSq2
CAediting_1073345chr15_92988136_+SINEAluAluSq2
CAediting_1073346chr15_92988138_+SINEAluAluSq2
CAediting_1073347chr15_92988176_+SINEAluAluSq2
CAediting_1073348chr15_92988200_+SINEAluAluSq2
CAediting_1073349chr15_92988209_+SINEAluAluSq2
CAediting_1073350chr15_92988212_+SINEAluAluSq2
CAediting_1073351chr15_92988217_+SINEAluAluSq2
CAediting_1073352chr15_92988222_+SINEAluAluSq2
CAediting_1073353chr15_92988282_+SINEAluAluSq2
CAediting_1073354chr15_92988359_+SINEAluAluSq2
CAediting_1073355chr15_92993671_+SINEAluAluJr
CAediting_1073356chr15_92993687_+SINEAluAluJr
CAediting_1073357chr15_92993688_+SINEAluAluJr
CAediting_1073358chr15_92993741_+SINEAluAluJr
CAediting_1073359chr15_92993812_+SINEAluAluJr
CAediting_1073360chr15_92993827_+SINEAluAluJr
CAediting_1073361chr15_92993828_+SINEAluAluJr
CAediting_1073362chr15_92993833_+SINEAluAluJr
CAediting_1073363chr15_92993850_+SINEAluAluJr
CAediting_1073364chr15_92993937_+SINEAluAluJr
CAediting_1073365chr15_92996203_+SINEAluAluY
CAediting_1073366chr15_92996224_+SINEAluAluY
CAediting_1073367chr15_92996277_+SINEAluAluY
CAediting_1073368chr15_92996317_+SINEAluAluY
CAediting_1073369chr15_92996367_+SINEAluAluY
CAediting_1073370chr15_92998969_+SINEAluAluY
CAediting_1073371chr15_92999004_+SINEAluAluY
CAediting_1073372chr15_92999005_+SINEAluAluY
CAediting_1073373chr15_92999064_+SINEAluAluY
CAediting_1073374chr15_93000044_+SINEAluAluSx
CAediting_1073375chr15_93000115_+SINEAluAluSx
CAediting_1073376chr15_93000186_+SINEAluAluSx
CAediting_1073377chr15_93000198_+SINEAluAluSx
CAediting_1073378chr15_93000998_+SINEAluAluSq10
CAediting_1073379chr15_93001650_+SINEAluAluSx1
CAediting_1073380chr15_93003138_+SINEAluAluJo
CAediting_1073381chr15_93003204_+SINEAluAluJo
CAediting_1073382chr15_93003848_+SINEAluAluSg
CAediting_1073383chr15_93003854_+SINEAluAluSg
CAediting_1073384chr15_93003864_+SINEAluAluSg
CAediting_1073385chr15_93003974_+SINEAluAluSg
CAediting_1073386chr15_93015140_+SINEAluAluSz6
CAediting_1073387chr15_93015142_+SINEAluAluSz6
CAediting_1073388chr15_93015143_+SINEAluAluSz6
CAediting_1073389chr15_93015159_+SINEAluAluSz6
CAediting_1073390chr15_93015178_+SINEAluAluSz6
CAediting_1073391chr15_93015196_+SINEAluAluSz6
CAediting_1073392chr15_93015208_+SINEAluAluSz6
CAediting_1073393chr15_93015251_+SINEAluAluSz6
CAediting_1073394chr15_93015341_+SINEAluAluSz6
CAediting_1073395chr15_93016610_+SINEAluAluJb
CAediting_1073396chr15_93016623_+SINEAluAluJb
CAediting_1073397chr15_93016626_+SINEAluAluJb
CAediting_1073398chr15_93016628_+SINEAluAluJb
CAediting_1073399chr15_93016640_+SINEAluAluJb
CAediting_1073400chr15_93016650_+SINEAluAluJb
CAediting_1073401chr15_93016661_+SINEAluAluJb
CAediting_1073402chr15_93016667_+SINEAluAluJb
CAediting_1073403chr15_93016701_+SINEAluAluJb
CAediting_1073404chr15_93016727_+SINEAluAluJb
CAediting_1073405chr15_93016731_+SINEAluAluJb
CAediting_1073406chr15_93016739_+SINEAluAluJb
CAediting_1073407chr15_93019684_+SINEAluAluSx1
CAediting_1073408chr15_93019738_+SINEAluAluSx1
CAediting_1073409chr15_93019748_+SINEAluAluSx1
CAediting_1073410chr15_93019758_+SINEAluAluSx1
CAediting_1073411chr15_93019859_+SINEAluAluSx1
CAediting_1073412chr15_93019883_+SINEAluAluSx1

Top

RNA A-to-I editing events in the alternative splicing sites for CHD2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000173575.17.CHD2.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000173575.17.CHD2.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for CHD2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for CHD2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for CHD2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1073256chr15_92946510_+ENSG00000173575.17ENST00000628375hsa-miR-340-3p92946504929465118mer-1a9294648892946511151.00-19.80
CAediting_1073256chr15_92946510_+ENSG00000173575.17ENST00000628375hsa-miR-6827-3p92946504929465118mer-1a9294649192946511140.00-14.67
CAediting_1073258chr15_92946616_+ENSG00000173575.17ENST00000628375hsa-miR-6743-3p92946611929466177mer-m89294659692946618140.00-19.35
CAediting_1073413chr15_93027235_+ENSG00000173575.17ENST00000625662hsa-miR-3156-3p93027233930272397mer-m89302722093027240151.00-18.68
CAediting_1073413chr15_93027235_+ENSG00000173575.17ENST00000625662hsa-miR-3156-3p93027233930272397mer-m89302722093027240151.00-18.68
CAediting_1073414chr15_93027252_+ENSG00000173575.17ENST00000625662hsa-miR-509093027245930272517mer-m89302723093027252152.00-23.42
CAediting_1073414chr15_93027252_+ENSG00000173575.17ENST00000625662hsa-miR-6775-5p93027245930272517mer-m89302722893027252140.00-17.11
CAediting_1073414chr15_93027252_+ENSG00000173575.17ENST00000625662hsa-miR-6784-5p93027246930272527mer-m89302723493027253140.00-16.78

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1073257chr15_92946587_+ENSG00000173575.17ENST00000628375hsa-miR-302a-5p92946581929465877mer-m89294656592946588152-13.75
CAediting_1073256chr15_92946510_+ENSG00000173575.17ENST00000628375hsa-miR-3664-5p92946507929465137mer-m89294649392946514153-17.48
CAediting_1073256chr15_92946510_+ENSG00000173575.17ENST00000628375hsa-miR-6888-3p92946505929465117mer-m89294649292946512151-14.42
CAediting_1073258chr15_92946616_+ENSG00000173575.17ENST00000628375hsa-miR-767-3p92946610929466167mer-m89294659592946617140-12.24
CAediting_1073414chr15_93027252_+ENSG00000173575.17ENST00000625662hsa-miR-6852-5p93027247930272548mer-1a9302723493027254141-18.77

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000173575.17ENST00000628375hsa-miR-605-3p92947358929473647mer-m89294734492947365148-13.81
CAediting_980496chr14_31014685_-ENSG00000173575.17ENST00000625662hsa-miR-624-3p92998243929982497mer-m89299823092998250145-12.44
CAediting_980496chr14_31014685_-ENSG00000173575.17ENST00000629104hsa-miR-624-3p92998243929982497mer-m89299823092998250145-12.44
CAediting_1229413chr17_67471544_+ENSG00000173575.17ENST00000626874hsa-miR-548aa93021352930213587mer-m89302132993021359141-18.41
CAediting_1229415chr17_67471547_+ENSG00000173575.17ENST00000626874hsa-miR-548aa93021192930211998mer-1a9302117793021199156-12.34
CAediting_1399425chr20_1392958_-ENSG00000173575.17ENST00000626874hsa-miR-6869-5p93022087930220948mer-1a9302207193022094149-23.3
CAediting_228905chr2_188297554_+ENSG00000173575.17ENST00000626874hsa-miR-561-3p93021107930211137mer-m89302109293021114151-11.81
CAediting_1229415chr17_67471547_+ENSG00000173575.17ENST00000628375hsa-miR-548aa92946388929463947mer-m89294637092946395153-10.57
CAediting_86358chr1_109598906_+ENSG00000173575.17ENST00000628375hsa-miR-197-5p92946727929467348mer-1a9294670692946734146-26.62
CAediting_77128chr1_85133844_+ENSG00000173575.17ENST00000625662hsa-miR-4423-3p93000556930005627mer-m89300054393000563140-12.68
CAediting_228905chr2_188297554_+ENSG00000173575.17ENST00000625662hsa-miR-561-3p93009309930093157mer-m89300929393009316150-16.21
CAediting_1229413chr17_67471544_+ENSG00000173575.17ENST00000625662hsa-miR-548aa93026446930264527mer-m89302642693026453155-19.34
CAediting_1229415chr17_67471547_+ENSG00000173575.17ENST00000625662hsa-miR-548aa93027283930272897mer-m89302726693027290145-12.61
CAediting_1368054chr19_46709310_-ENSG00000173575.17ENST00000625662hsa-miR-320e93024874930248807mer-m89302486493024881150-22.05
CAediting_604450chr7_133034877_-ENSG00000173575.17ENST00000625662hsa-miR-365493024872930248787mer-m89302486193024879149-19.25
CAediting_77128chr1_85133844_+ENSG00000173575.17ENST00000629104hsa-miR-4423-3p93000556930005627mer-m89300054393000563140-12.68
CAediting_468389chr6_31355314_-ENSG00000173575.17ENST00000626874hsa-miR-6891-5p93021823930218308mer-1a9302181293021830140-19.07

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229413chr17_67471544_+ENSG00000173575.17ENST00000626874hsa-miR-548aa93020808930208147mer-m89302079193020815154-7.67
CAediting_1229414chr17_67471546_+ENSG00000173575.17ENST00000626874hsa-miR-548aa93020808930208147mer-m89302079193020815154-7.67
CAediting_1229415chr17_67471547_+ENSG00000173575.17ENST00000626874hsa-miR-548aa93020808930208147mer-m89302079193020815154-7.67
CAediting_524911chr7_5495852_-ENSG00000173575.17ENST00000626874hsa-miR-589-3p93021723930217297mer-m89302170793021730148-16.17
CAediting_1229413chr17_67471544_+ENSG00000173575.17ENST00000628375hsa-miR-548aa92947262929472687mer-1a9294726292947287145-19.86
CAediting_1229415chr17_67471547_+ENSG00000173575.17ENST00000628375hsa-miR-548aa92947262929472687mer-1a9294726292947287145-19.86
CAediting_86358chr1_109598906_+ENSG00000173575.17ENST00000625662hsa-miR-197-5p93024545930245517mer-m89302453093024552145-15.35
CAediting_393chr1_1167164_+ENSG00000173575.17ENST00000625662hsa-miR-200b-3p93025771930257777mer-m89302575793025778140-9.97
CAediting_393chr1_1167164_+ENSG00000173575.17ENST00000625662hsa-miR-200b-3p93026150930261567mer-m89302613693026157148-11.68
CAediting_1306323chr19_13836462_-ENSG00000173575.17ENST00000625662hsa-miR-27a-3p93025482930254887mer-m89302547093025489155-17.92
CAediting_1306324chr19_13836464_-ENSG00000173575.17ENST00000625662hsa-miR-27a-3p93025482930254887mer-m89302547093025489155-17.92
CAediting_1368054chr19_46709310_-ENSG00000173575.17ENST00000625662hsa-miR-320e93024986930249927mer-m89302497693024993140-11.1
CAediting_1229413chr17_67471544_+ENSG00000173575.17ENST00000625662hsa-miR-548aa93027789930277957mer-m89302777293027796140-11.25
CAediting_1229414chr17_67471546_+ENSG00000173575.17ENST00000625662hsa-miR-548aa93027789930277957mer-m89302777293027796140-11.25
CAediting_1229415chr17_67471547_+ENSG00000173575.17ENST00000625662hsa-miR-548aa93027789930277957mer-m89302777293027796140-11.25
CAediting_1351755chr19_40282625_-ENSG00000173575.17ENST00000625662hsa-miR-64193026967930269748mer-1a9302694793026974147-15.61
CAediting_580943chr7_100356700_+ENSG00000173575.17ENST00000625662hsa-miR-6840-3p93026322930263287mer-m89302630993026329153-26.95
CAediting_468389chr6_31355314_-ENSG00000173575.17ENST00000625662hsa-miR-6891-5p93025431930254377mer-m89302541993025438144-18.96

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for CHD2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

Top

Relation with ADAR for CHD2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

Top

Relation with cancer stages for CHD2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

Top

Relation with survival for CHD2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

Top

RelatedDrugs for CHD2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for CHD2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
CHD2C0014544Epilepsy2CTD_human
CHD2C0086237Epilepsy, Cryptogenic2CTD_human
CHD2C0236018Aura2CTD_human
CHD2C0751111Awakening Epilepsy2CTD_human
CHD2C3809278EPILEPTIC ENCEPHALOPATHY, CHILDHOOD-ONSET2GENOMICS_ENGLAND;UNIPROT
CHD2C0040517Gilles de la Tourette syndrome1GENOMICS_ENGLAND
CHD2C0238111Lennox-Gastaut syndrome1ORPHANET
CHD2C0393702Myoclonic Astatic Epilepsy1ORPHANET
CHD2C0543888Epileptic encephalopathy1GENOMICS_ENGLAND
CHD2C1510586Autism Spectrum Disorders1CTD_human
CHD2C1535926Neurodevelopmental Disorders1CTD_human