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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: UPK1A (CAeditome ID:11045) |
Gene summary for UPK1A |
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Gene information | Gene symbol | UPK1A | Gene ID | 11045 |
Gene name | uroplakin 1A | |
Synonyms | TSPAN21|UP1A|UPIA|UPKA | |
Cytomap | 19q13.12 | |
Type of gene | protein-coding | |
Description | uroplakin-1atetraspanin-21tspan-21uroplakin Ia | |
Modification date | 20210518 | |
UniProtAcc | O00322 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
UPK1A | GO:0030855 | Uroplakin-1a | 10514386 |
UPK1A | GO:0009986 | Uroplakin-1a | 28228557 |
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RNA A-to-I events for UPK1A |
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CAediting_1338765(35673723, +), CAediting_1338766(35673927, +), CAediting_1338767(35673997, +), CAediting_1338768(35674015, +), CAediting_1338769(35674037, +), CAediting_1338770(35674173, +), CAediting_1338771(35674364, +), CAediting_1338772(35674376, +), CAediting_1338773(35674444, +), CAediting_1338774(35674779, +), CAediting_1338775(35674780, +), CAediting_1338776(35674784, +), CAediting_1338777(35674786, +), CAediting_1338778(35674787, +), CAediting_1338779(35674793, +), CAediting_1338780(35674817, +), CAediting_1338781(35674822, +), CAediting_1338782(35674832, +), CAediting_1338783(35674840, +), CAediting_1338784(35674841, +), CAediting_1338785(35674843, +), CAediting_1338786(35674858, +), CAediting_1338787(35674864, +), CAediting_1338788(35674866, +), CAediting_1338789(35674886, +), CAediting_1338790(35674895, +), CAediting_1338791(35674899, +), CAediting_1338792(35674905, +), CAediting_1338793(35674908, +), CAediting_1338794(35674931, +), CAediting_1338795(35674944, +), CAediting_1338796(35674948, +), CAediting_1338797(35674957, +), CAediting_1338798(35674962, +), CAediting_1338799(35674963, +), CAediting_1338800(35674967, +), CAediting_1338801(35674983, +), CAediting_1338802(35674987, +), CAediting_1338803(35674991, +), CAediting_1338804(35674992, +), CAediting_1338805(35674994, +), CAediting_1338806(35675282, +), CAediting_1338807(35675287, +), CAediting_1338808(35675346, +), CAediting_1338809(35675356, +), CAediting_1338810(35675361, +), CAediting_1338811(35675381, +), CAediting_1338812(35675382, +), CAediting_1338813(35675386, +), CAediting_1338814(35675408, +), CAediting_1338815(35675411, +), CAediting_1338816(35675418, +), CAediting_1338817(35675423, +), CAediting_1338818(35675434, +), CAediting_1338819(35675455, +), CAediting_1338820(35675461, +), CAediting_1338821(35675464, +), CAediting_1338822(35675490, +), CAediting_1338823(35675515, +), CAediting_1338824(35675555, +), CAediting_1338825(35675781, +), CAediting_1338826(35676230, +), CAediting_1338827(35676241, +), CAediting_1338828(35676244, +), CAediting_1338829(35676255, +), CAediting_1338830(35676303, +), CAediting_1338831(35676308, +), CAediting_1338832(35676320, +), CAediting_1338833(35676330, +), CAediting_1338834(35676370, +), CAediting_1338835(35676373, +), CAediting_1338836(35676425, +), CAediting_1338837(35676451, +), CAediting_1338838(35676452, +), CAediting_1338839(35676464, +), CAediting_1338840(35676643, +), CAediting_1338841(35676644, +), CAediting_1338842(35676674, +), CAediting_1338843(35676690, +), CAediting_1338844(35676734, +), CAediting_1338845(35676738, +), CAediting_1338846(35676765, +), CAediting_1338847(35676788, +), CAediting_1338848(35676805, +), CAediting_1338849(35676814, +), CAediting_1338850(35676844, +), CAediting_1338851(35676864, +), CAediting_1338852(35676993, +), CAediting_1338853(35677007, +), CAediting_1338854(35677020, +), CAediting_1338855(35677081, +), CAediting_1338856(35677125, +), CAediting_1338857(35677264, +), CAediting_1338858(35677273, +), CAediting_1338859(35677278, +), CAediting_1338860(35677311, +), CAediting_1338861(35677350, +), CAediting_1338862(35677361, +), CAediting_1338863(35677415, +), CAediting_1338864(35677428, +), CAediting_1338865(35677432, +), CAediting_1338866(35677446, +), CAediting_1338867(35677447, +), |
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RNA editing positional annotations for UPK1A using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
CAediting_1338830 | chr19_35676303_+ | nonsynonymous SNV | ENST00000379013.5 | c.A716G | p.H239R | D | B | N |
CAediting_1338830 | chr19_35676303_+ | nonsynonymous SNV | ENST00000616789.3 | c.A716G | p.H239R | D | B | N |
CAediting_1338831 | chr19_35676308_+ | nonsynonymous SNV | ENST00000379013.5 | c.A721G | p.S241G | D | B | N |
CAediting_1338831 | chr19_35676308_+ | nonsynonymous SNV | ENST00000616789.3 | c.A721G | p.S241G | D | B | N |
CAediting_1338832 | chr19_35676320_+ | nonsynonymous SNV | ENST00000379013.5 | c.A733G | p.S245G | D | B | N |
CAediting_1338832 | chr19_35676320_+ | nonsynonymous SNV | ENST00000616789.3 | c.A733G | p.S245G | D | B | N |
CAediting_1338833 | chr19_35676330_+ | nonsynonymous SNV | ENST00000379013.5 | c.A743G | p.Y248C | D | P | N |
CAediting_1338833 | chr19_35676330_+ | nonsynonymous SNV | ENST00000616789.3 | c.A743G | p.Y248C | D | P | N |
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CAeditome ID | Position | Variant type |
CAediting_1338765 | chr19_35673723_+ | intronic |
CAediting_1338766 | chr19_35673927_+ | intronic |
CAediting_1338767 | chr19_35673997_+ | intronic |
CAediting_1338768 | chr19_35674015_+ | intronic |
CAediting_1338769 | chr19_35674037_+ | intronic |
CAediting_1338770 | chr19_35674173_+ | intronic |
CAediting_1338771 | chr19_35674364_+ | intronic |
CAediting_1338772 | chr19_35674376_+ | intronic |
CAediting_1338773 | chr19_35674444_+ | intronic |
CAediting_1338774 | chr19_35674779_+ | intronic |
CAediting_1338775 | chr19_35674780_+ | intronic |
CAediting_1338776 | chr19_35674784_+ | intronic |
CAediting_1338777 | chr19_35674786_+ | intronic |
CAediting_1338778 | chr19_35674787_+ | intronic |
CAediting_1338779 | chr19_35674793_+ | intronic |
CAediting_1338780 | chr19_35674817_+ | intronic |
CAediting_1338781 | chr19_35674822_+ | intronic |
CAediting_1338782 | chr19_35674832_+ | intronic |
CAediting_1338783 | chr19_35674840_+ | intronic |
CAediting_1338784 | chr19_35674841_+ | intronic |
CAediting_1338785 | chr19_35674843_+ | intronic |
CAediting_1338786 | chr19_35674858_+ | intronic |
CAediting_1338787 | chr19_35674864_+ | intronic |
CAediting_1338788 | chr19_35674866_+ | intronic |
CAediting_1338789 | chr19_35674886_+ | intronic |
CAediting_1338790 | chr19_35674895_+ | intronic |
CAediting_1338791 | chr19_35674899_+ | intronic |
CAediting_1338792 | chr19_35674905_+ | intronic |
CAediting_1338793 | chr19_35674908_+ | intronic |
CAediting_1338794 | chr19_35674931_+ | intronic |
CAediting_1338795 | chr19_35674944_+ | intronic |
CAediting_1338796 | chr19_35674948_+ | intronic |
CAediting_1338797 | chr19_35674957_+ | intronic |
CAediting_1338798 | chr19_35674962_+ | intronic |
CAediting_1338799 | chr19_35674963_+ | intronic |
CAediting_1338800 | chr19_35674967_+ | intronic |
CAediting_1338801 | chr19_35674983_+ | intronic |
CAediting_1338802 | chr19_35674987_+ | intronic |
CAediting_1338803 | chr19_35674991_+ | intronic |
CAediting_1338804 | chr19_35674992_+ | intronic |
CAediting_1338805 | chr19_35674994_+ | intronic |
CAediting_1338806 | chr19_35675282_+ | intronic |
CAediting_1338807 | chr19_35675287_+ | intronic |
CAediting_1338808 | chr19_35675346_+ | intronic |
CAediting_1338809 | chr19_35675356_+ | intronic |
CAediting_1338810 | chr19_35675361_+ | intronic |
CAediting_1338811 | chr19_35675381_+ | intronic |
CAediting_1338812 | chr19_35675382_+ | intronic |
CAediting_1338813 | chr19_35675386_+ | intronic |
CAediting_1338814 | chr19_35675408_+ | intronic |
CAediting_1338815 | chr19_35675411_+ | intronic |
CAediting_1338816 | chr19_35675418_+ | intronic |
CAediting_1338817 | chr19_35675423_+ | intronic |
CAediting_1338818 | chr19_35675434_+ | intronic |
CAediting_1338819 | chr19_35675455_+ | intronic |
CAediting_1338820 | chr19_35675461_+ | intronic |
CAediting_1338821 | chr19_35675464_+ | intronic |
CAediting_1338822 | chr19_35675490_+ | intronic |
CAediting_1338823 | chr19_35675515_+ | intronic |
CAediting_1338824 | chr19_35675555_+ | intronic |
CAediting_1338825 | chr19_35675781_+ | intronic |
CAediting_1338826 | chr19_35676230_+ | intronic |
CAediting_1338827 | chr19_35676241_+ | exonic |
CAediting_1338828 | chr19_35676244_+ | exonic |
CAediting_1338829 | chr19_35676255_+ | exonic |
CAediting_1338830 | chr19_35676303_+ | exonic |
CAediting_1338831 | chr19_35676308_+ | exonic |
CAediting_1338832 | chr19_35676320_+ | exonic |
CAediting_1338833 | chr19_35676330_+ | exonic |
CAediting_1338834 | chr19_35676370_+ | intronic |
CAediting_1338835 | chr19_35676373_+ | intronic |
CAediting_1338836 | chr19_35676425_+ | intronic |
CAediting_1338837 | chr19_35676451_+ | intronic |
CAediting_1338838 | chr19_35676452_+ | intronic |
CAediting_1338839 | chr19_35676464_+ | intronic |
CAediting_1338840 | chr19_35676643_+ | intronic |
CAediting_1338841 | chr19_35676644_+ | intronic |
CAediting_1338842 | chr19_35676674_+ | intronic |
CAediting_1338843 | chr19_35676690_+ | intronic |
CAediting_1338844 | chr19_35676734_+ | intronic |
CAediting_1338845 | chr19_35676738_+ | intronic |
CAediting_1338846 | chr19_35676765_+ | intronic |
CAediting_1338847 | chr19_35676788_+ | intronic |
CAediting_1338848 | chr19_35676805_+ | intronic |
CAediting_1338849 | chr19_35676814_+ | intronic |
CAediting_1338850 | chr19_35676844_+ | intronic |
CAediting_1338851 | chr19_35676864_+ | intronic |
CAediting_1338852 | chr19_35676993_+ | intronic |
CAediting_1338853 | chr19_35677007_+ | intronic |
CAediting_1338854 | chr19_35677020_+ | intronic |
CAediting_1338855 | chr19_35677081_+ | intronic |
CAediting_1338856 | chr19_35677125_+ | intronic |
CAediting_1338857 | chr19_35677264_+ | intronic |
CAediting_1338858 | chr19_35677273_+ | intronic |
CAediting_1338859 | chr19_35677278_+ | intronic |
CAediting_1338860 | chr19_35677311_+ | intronic |
CAediting_1338861 | chr19_35677350_+ | intronic |
CAediting_1338862 | chr19_35677361_+ | intronic |
CAediting_1338863 | chr19_35677415_+ | intronic |
CAediting_1338864 | chr19_35677428_+ | intronic |
CAediting_1338865 | chr19_35677432_+ | intronic |
CAediting_1338866 | chr19_35677446_+ | intronic |
CAediting_1338867 | chr19_35677447_+ | intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_1338765 | chr19_35673723_+ | SINE | MIR | MIR |
CAediting_1338766 | chr19_35673927_+ | SINE | Alu | AluJr |
CAediting_1338767 | chr19_35673997_+ | SINE | Alu | AluJr |
CAediting_1338768 | chr19_35674015_+ | SINE | Alu | AluJr |
CAediting_1338769 | chr19_35674037_+ | SINE | Alu | AluJr |
CAediting_1338770 | chr19_35674173_+ | SINE | Alu | AluJr |
CAediting_1338771 | chr19_35674364_+ | SINE | Alu | AluYm1 |
CAediting_1338772 | chr19_35674376_+ | SINE | Alu | AluYm1 |
CAediting_1338773 | chr19_35674444_+ | SINE | Alu | AluYm1 |
CAediting_1338774 | chr19_35674779_+ | SINE | Alu | AluSz |
CAediting_1338775 | chr19_35674780_+ | SINE | Alu | AluSz |
CAediting_1338776 | chr19_35674784_+ | SINE | Alu | AluSz |
CAediting_1338777 | chr19_35674786_+ | SINE | Alu | AluSz |
CAediting_1338778 | chr19_35674787_+ | SINE | Alu | AluSz |
CAediting_1338779 | chr19_35674793_+ | SINE | Alu | AluSz |
CAediting_1338780 | chr19_35674817_+ | SINE | Alu | AluSz |
CAediting_1338781 | chr19_35674822_+ | SINE | Alu | AluSz |
CAediting_1338782 | chr19_35674832_+ | SINE | Alu | AluSz |
CAediting_1338783 | chr19_35674840_+ | SINE | Alu | AluSz |
CAediting_1338784 | chr19_35674841_+ | SINE | Alu | AluSz |
CAediting_1338785 | chr19_35674843_+ | SINE | Alu | AluSz |
CAediting_1338786 | chr19_35674858_+ | SINE | Alu | AluSz |
CAediting_1338787 | chr19_35674864_+ | SINE | Alu | AluSz |
CAediting_1338788 | chr19_35674866_+ | SINE | Alu | AluSz |
CAediting_1338789 | chr19_35674886_+ | SINE | Alu | AluSz |
CAediting_1338790 | chr19_35674895_+ | SINE | Alu | AluSz |
CAediting_1338791 | chr19_35674899_+ | SINE | Alu | AluSz |
CAediting_1338792 | chr19_35674905_+ | SINE | Alu | AluSz |
CAediting_1338793 | chr19_35674908_+ | SINE | Alu | AluSz |
CAediting_1338794 | chr19_35674931_+ | SINE | Alu | AluSz |
CAediting_1338795 | chr19_35674944_+ | SINE | Alu | AluSz |
CAediting_1338796 | chr19_35674948_+ | SINE | Alu | AluSz |
CAediting_1338797 | chr19_35674957_+ | SINE | Alu | AluSz |
CAediting_1338798 | chr19_35674962_+ | SINE | Alu | AluSz |
CAediting_1338799 | chr19_35674963_+ | SINE | Alu | AluSz |
CAediting_1338800 | chr19_35674967_+ | SINE | Alu | AluSz |
CAediting_1338801 | chr19_35674983_+ | SINE | Alu | AluSz |
CAediting_1338802 | chr19_35674987_+ | SINE | Alu | AluSz |
CAediting_1338803 | chr19_35674991_+ | SINE | Alu | AluSz |
CAediting_1338804 | chr19_35674992_+ | SINE | Alu | AluSz |
CAediting_1338805 | chr19_35674994_+ | SINE | Alu | AluSz |
CAediting_1338806 | chr19_35675282_+ | SINE | Alu | AluSq |
CAediting_1338807 | chr19_35675287_+ | SINE | Alu | AluSq |
CAediting_1338808 | chr19_35675346_+ | SINE | Alu | AluSq |
CAediting_1338809 | chr19_35675356_+ | SINE | Alu | AluSq |
CAediting_1338810 | chr19_35675361_+ | SINE | Alu | AluSq |
CAediting_1338811 | chr19_35675381_+ | SINE | Alu | AluSq |
CAediting_1338812 | chr19_35675382_+ | SINE | Alu | AluSq |
CAediting_1338813 | chr19_35675386_+ | SINE | Alu | AluSq |
CAediting_1338814 | chr19_35675408_+ | SINE | Alu | AluSq |
CAediting_1338815 | chr19_35675411_+ | SINE | Alu | AluSq |
CAediting_1338816 | chr19_35675418_+ | SINE | Alu | AluSq |
CAediting_1338817 | chr19_35675423_+ | SINE | Alu | AluSq |
CAediting_1338818 | chr19_35675434_+ | SINE | Alu | AluSq |
CAediting_1338819 | chr19_35675455_+ | SINE | Alu | AluSq |
CAediting_1338820 | chr19_35675461_+ | SINE | Alu | AluSq |
CAediting_1338821 | chr19_35675464_+ | SINE | Alu | AluSq |
CAediting_1338822 | chr19_35675490_+ | SINE | Alu | AluSq |
CAediting_1338823 | chr19_35675515_+ | SINE | Alu | AluSq |
CAediting_1338824 | chr19_35675555_+ | SINE | Alu | AluSq |
CAediting_1338825 | chr19_35675781_+ | SINE | MIR | MIRb |
CAediting_1338826 | chr19_35676230_+ | SINE | Alu | AluSz |
CAediting_1338827 | chr19_35676241_+ | SINE | Alu | AluSz |
CAediting_1338828 | chr19_35676244_+ | SINE | Alu | AluSz |
CAediting_1338829 | chr19_35676255_+ | SINE | Alu | AluSz |
CAediting_1338830 | chr19_35676303_+ | SINE | Alu | AluSz |
CAediting_1338831 | chr19_35676308_+ | SINE | Alu | AluSz |
CAediting_1338832 | chr19_35676320_+ | SINE | Alu | AluSz |
CAediting_1338833 | chr19_35676330_+ | SINE | Alu | AluSz |
CAediting_1338834 | chr19_35676370_+ | SINE | Alu | AluSz |
CAediting_1338835 | chr19_35676373_+ | SINE | Alu | AluSz |
CAediting_1338836 | chr19_35676425_+ | SINE | Alu | AluSz |
CAediting_1338837 | chr19_35676451_+ | SINE | Alu | AluSz |
CAediting_1338838 | chr19_35676452_+ | SINE | Alu | AluSz |
CAediting_1338839 | chr19_35676464_+ | SINE | Alu | AluSz |
CAediting_1338840 | chr19_35676643_+ | SINE | Alu | AluSz |
CAediting_1338841 | chr19_35676644_+ | SINE | Alu | AluSz |
CAediting_1338842 | chr19_35676674_+ | SINE | Alu | AluSz |
CAediting_1338843 | chr19_35676690_+ | SINE | Alu | AluSz |
CAediting_1338844 | chr19_35676734_+ | SINE | Alu | AluSz |
CAediting_1338845 | chr19_35676738_+ | SINE | Alu | AluSz |
CAediting_1338846 | chr19_35676765_+ | SINE | Alu | AluSz |
CAediting_1338847 | chr19_35676788_+ | SINE | Alu | AluSz |
CAediting_1338848 | chr19_35676805_+ | SINE | Alu | AluSz |
CAediting_1338849 | chr19_35676814_+ | SINE | Alu | AluSz |
CAediting_1338850 | chr19_35676844_+ | SINE | Alu | AluSz |
CAediting_1338851 | chr19_35676864_+ | SINE | Alu | AluSz |
CAediting_1338852 | chr19_35676993_+ | SINE | Alu | AluJo |
CAediting_1338853 | chr19_35677007_+ | SINE | Alu | AluJo |
CAediting_1338854 | chr19_35677020_+ | SINE | Alu | AluJo |
CAediting_1338855 | chr19_35677081_+ | SINE | Alu | AluJo |
CAediting_1338856 | chr19_35677125_+ | SINE | Alu | AluJo |
CAediting_1338857 | chr19_35677264_+ | SINE | Alu | AluSg |
CAediting_1338858 | chr19_35677273_+ | SINE | Alu | AluSg |
CAediting_1338859 | chr19_35677278_+ | SINE | Alu | AluSg |
CAediting_1338860 | chr19_35677311_+ | SINE | Alu | AluSg |
CAediting_1338861 | chr19_35677350_+ | SINE | Alu | AluSg |
CAediting_1338862 | chr19_35677361_+ | SINE | Alu | AluSg |
CAediting_1338863 | chr19_35677415_+ | SINE | Alu | AluSg |
CAediting_1338864 | chr19_35677428_+ | SINE | Alu | AluSg |
CAediting_1338865 | chr19_35677432_+ | SINE | Alu | AluSg |
CAediting_1338866 | chr19_35677446_+ | SINE | Alu | AluSg |
CAediting_1338867 | chr19_35677447_+ | SINE | Alu | AluSg |
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RNA A-to-I editing events in the alternative splicing sites for UPK1A |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
ES | CAediting_1338826 | chr19_35676230_+ | 35676215:35676237 | 3SS | 0+5i | GAGTCCTGCTCTGTCACCCAGGC | -9.44 | GAGTCCTGCTCTGTCGCCCAGGC | -10.54 |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for UPK1A |
![]() * The grey color means N/A. |
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![]() * Click on the image to enlarge it in a new window. |
BLCA.CAediting_1338815.ENSG00000105668.UPK1A.png ![]() |
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Protein coding region RNA A-to-I editings for UPK1A |
![]() * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for UPK1A |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1351755 | chr19_40282625_- | ENSG00000105668.6 | ENST00000617999 | hsa-miR-641 | 35678183 | 35678189 | 7mer-1a | 35678167 | 35678189 | 144 | -15.67 |
CAediting_1351755 | chr19_40282625_- | ENSG00000105668.6 | ENST00000616789 | hsa-miR-641 | 35678183 | 35678189 | 7mer-1a | 35678167 | 35678189 | 144 | -15.67 |
CAediting_524911 | chr7_5495852_- | ENSG00000105668.6 | ENST00000616789 | hsa-miR-589-3p | 35678011 | 35678018 | 8mer-1a | 35677995 | 35678018 | 140 | -13.94 |
CAediting_524911 | chr7_5495852_- | ENSG00000105668.6 | ENST00000379013 | hsa-miR-589-3p | 35678011 | 35678018 | 8mer-1a | 35677995 | 35678018 | 140 | -13.94 |
CAediting_1351755 | chr19_40282625_- | ENSG00000105668.6 | ENST00000222275 | hsa-miR-641 | 35678183 | 35678189 | 7mer-1a | 35678167 | 35678189 | 144 | -15.67 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for UPK1A |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for UPK1A |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
BLCA | CAediting_1338775 | chr19_35674780_+ | 0.00837014520808372 | 0.304389215554192 | 0.0203248160933193 | 0.269309850599069 | . | . |
BLCA | CAediting_1338776 | chr19_35674784_+ | 0.00331756246116685 | 0.343924478673332 | . | . | . | . |
BLCA | CAediting_1338828 | chr19_35676244_+ | 1.19798346582142e-06 | 0.358409104826902 | . | . | . | . |
BLCA | CAediting_1338848 | chr19_35676805_+ | 0.00441212177679445 | 0.362587250414463 | . | . | . | . |
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Relation with cancer stages for UPK1A |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for UPK1A |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for UPK1A |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for UPK1A |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |