Home

Download

Statistics

Examples

Help

Contact

Editing gene: ADAP1 (CAeditome ID:11033)

Gene summary for ADAP1

Gene summary

Gene information	Gene symbol	ADAP1
	Gene ID	11033
	Gene name	ArfGAP with dual PH domains 1
	Synonyms	CENTA1\|GCS1L\|p42IP4
	Cytomap	7p22.3
	Type of gene	protein-coding
	Description	arf-GAP with dual PH domain-containing protein 1centaurin-alphacentaurin-alpha-1cnt-a1putative MAPK-activating protein PM25
	Modification date	20210529
	UniProtAcc	O75689
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
ADAP1	GO:0005096	Arf-GAP with dual PH domain-containing protein 1	10333475
ADAP1	GO:0005096	Arf-GAP with dual PH domain-containing protein 1	10448098
ADAP1	GO:0005634	Arf-GAP with dual PH domain-containing protein 1	10333475
ADAP1	GO:0005634	Arf-GAP with dual PH domain-containing protein 1	10448098
ADAP1	GO:0005737	Arf-GAP with dual PH domain-containing protein 1	10333475
ADAP1	GO:0005737	Arf-GAP with dual PH domain-containing protein 1	10448098
ADAP1	GO:0005829	Arf-GAP with dual PH domain-containing protein 1	0000052
ADAP1	GO:0005886	Arf-GAP with dual PH domain-containing protein 1	0000052
ADAP1	GO:0005886	Arf-GAP with dual PH domain-containing protein 1	10333475
ADAP1	GO:0005886	Arf-GAP with dual PH domain-containing protein 1	10448098

Top

RNA A-to-I events for ADAP1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000105963.12

RNA A-to-I editing events in Cancer.

CAediting_519928(902202, -), CAediting_519929(902224, -), CAediting_519930(912777, -), CAediting_519931(912804, -), CAediting_519932(912925, -), CAediting_519933(912964, -), CAediting_519934(912968, -), CAediting_519935(912973, -), CAediting_519936(912977, -), CAediting_519937(912989, -), CAediting_519938(913069, -), CAediting_519939(913263, -), CAediting_519940(913277, -), CAediting_519941(913312, -), CAediting_519942(913316, -), CAediting_519943(913473, -), CAediting_519944(913678, -), CAediting_519945(913690, -), CAediting_519946(913691, -), CAediting_519947(913752, -), CAediting_519948(913763, -), CAediting_519949(913811, -), CAediting_519950(913813, -), CAediting_519951(913823, -), CAediting_519952(913832, -), CAediting_519953(913835, -), CAediting_519954(913866, -), CAediting_519955(913883, -), CAediting_519956(913896, -), CAediting_519957(928024, -), CAediting_519958(928194, -), CAediting_519959(928358, -), CAediting_519960(929100, -), CAediting_519961(929488, -), CAediting_519962(929489, -), CAediting_519963(929860, -), CAediting_519964(929972, -), CAediting_519965(930009, -), CAediting_519966(930562, -), CAediting_519967(930574, -), CAediting_519968(930602, -), CAediting_519969(930781, -), CAediting_519970(932730, -), CAediting_519971(932983, -), CAediting_519972(933027, -), CAediting_519973(933037, -), CAediting_519974(933080, -), CAediting_519975(933092, -), CAediting_519976(933105, -), CAediting_519977(933108, -), CAediting_519978(933147, -), CAediting_519979(933162, -), CAediting_519980(933171, -), CAediting_519981(933184, -), CAediting_519982(933185, -), CAediting_519983(933188, -), CAediting_519984(933189, -), CAediting_519985(933208, -), CAediting_519986(933263, -), CAediting_519987(933309, -), CAediting_519988(933313, -), CAediting_519989(933322, -), CAediting_519990(933330, -), CAediting_519991(933335, -), CAediting_519992(933336, -), CAediting_519993(933357, -), CAediting_519994(933390, -), CAediting_519995(936194, -), CAediting_519996(936195, -), CAediting_519997(936357, -), CAediting_519998(936419, -), CAediting_519999(936425, -), CAediting_520000(938212, -), CAediting_520001(938273, -), CAediting_520002(938278, -), CAediting_520003(938309, -), CAediting_520004(938381, -), CAediting_520005(938428, -), CAediting_520006(938432, -), CAediting_520007(938433, -), CAediting_520008(938441, -), CAediting_520009(938448, -), CAediting_520010(938454, -), CAediting_520011(938461, -), CAediting_520012(938477, -), CAediting_520013(939302, -), CAediting_520014(939574, -), CAediting_520015(940228, -), CAediting_520016(940256, -), CAediting_520017(944008, -), CAediting_520018(944012, -), CAediting_520019(944415, -), CAediting_520020(946949, -), CAediting_520021(947160, -), CAediting_520022(947164, -), CAediting_520023(947276, -), CAediting_520024(947324, -), CAediting_520025(947336, -), CAediting_520026(947352, -), CAediting_520027(948759, -), CAediting_520028(948782, -), CAediting_520029(948793, -), CAediting_520030(948794, -), CAediting_520031(948836, -), CAediting_520032(948861, -), CAediting_520033(948900, -), CAediting_520034(948901, -), CAediting_520035(951130, -), CAediting_520036(951207, -), CAediting_520037(951574, -), CAediting_520038(951635, -), CAediting_520039(951660, -), CAediting_520040(951728, -), CAediting_520041(951734, -), CAediting_520042(951852, -), CAediting_520043(951894, -), CAediting_520044(951899, -),

Top

RNA editing positional annotations for ADAP1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_519928	chr7_902202_-	ncRNA_intronic
CAediting_519929	chr7_902224_-	ncRNA_intronic
CAediting_519930	chr7_912777_-	ncRNA_intronic
CAediting_519931	chr7_912804_-	ncRNA_intronic
CAediting_519932	chr7_912925_-	ncRNA_intronic
CAediting_519933	chr7_912964_-	ncRNA_intronic
CAediting_519934	chr7_912968_-	ncRNA_intronic
CAediting_519935	chr7_912973_-	ncRNA_intronic
CAediting_519936	chr7_912977_-	ncRNA_intronic
CAediting_519937	chr7_912989_-	ncRNA_intronic
CAediting_519938	chr7_913069_-	ncRNA_intronic
CAediting_519939	chr7_913263_-	ncRNA_intronic
CAediting_519940	chr7_913277_-	ncRNA_intronic
CAediting_519941	chr7_913312_-	ncRNA_intronic
CAediting_519942	chr7_913316_-	ncRNA_intronic
CAediting_519943	chr7_913473_-	ncRNA_intronic
CAediting_519944	chr7_913678_-	ncRNA_intronic
CAediting_519945	chr7_913690_-	ncRNA_intronic
CAediting_519946	chr7_913691_-	ncRNA_intronic
CAediting_519947	chr7_913752_-	ncRNA_intronic
CAediting_519948	chr7_913763_-	ncRNA_intronic
CAediting_519949	chr7_913811_-	ncRNA_intronic
CAediting_519950	chr7_913813_-	ncRNA_intronic
CAediting_519951	chr7_913823_-	ncRNA_intronic
CAediting_519952	chr7_913832_-	ncRNA_intronic
CAediting_519953	chr7_913835_-	ncRNA_intronic
CAediting_519954	chr7_913866_-	ncRNA_intronic
CAediting_519955	chr7_913883_-	ncRNA_intronic
CAediting_519956	chr7_913896_-	ncRNA_intronic
CAediting_519957	chr7_928024_-	ncRNA_intronic
CAediting_519958	chr7_928194_-	ncRNA_intronic
CAediting_519959	chr7_928358_-	ncRNA_intronic
CAediting_519960	chr7_929100_-	ncRNA_intronic
CAediting_519961	chr7_929488_-	ncRNA_intronic
CAediting_519962	chr7_929489_-	ncRNA_intronic
CAediting_519963	chr7_929860_-	ncRNA_intronic
CAediting_519964	chr7_929972_-	ncRNA_intronic
CAediting_519965	chr7_930009_-	ncRNA_intronic
CAediting_519966	chr7_930562_-	ncRNA_intronic
CAediting_519967	chr7_930574_-	ncRNA_intronic
CAediting_519968	chr7_930602_-	ncRNA_intronic
CAediting_519969	chr7_930781_-	ncRNA_intronic
CAediting_519970	chr7_932730_-	ncRNA_intronic
CAediting_519971	chr7_932983_-	ncRNA_intronic
CAediting_519972	chr7_933027_-	ncRNA_intronic
CAediting_519973	chr7_933037_-	ncRNA_intronic
CAediting_519974	chr7_933080_-	ncRNA_intronic
CAediting_519975	chr7_933092_-	ncRNA_intronic
CAediting_519976	chr7_933105_-	ncRNA_intronic
CAediting_519977	chr7_933108_-	ncRNA_intronic
CAediting_519978	chr7_933147_-	ncRNA_intronic
CAediting_519979	chr7_933162_-	ncRNA_intronic
CAediting_519980	chr7_933171_-	ncRNA_intronic
CAediting_519981	chr7_933184_-	ncRNA_intronic
CAediting_519982	chr7_933185_-	ncRNA_intronic
CAediting_519983	chr7_933188_-	ncRNA_intronic
CAediting_519984	chr7_933189_-	ncRNA_intronic
CAediting_519985	chr7_933208_-	ncRNA_intronic
CAediting_519986	chr7_933263_-	ncRNA_intronic
CAediting_519987	chr7_933309_-	ncRNA_intronic
CAediting_519988	chr7_933313_-	ncRNA_intronic
CAediting_519989	chr7_933322_-	ncRNA_intronic
CAediting_519990	chr7_933330_-	ncRNA_intronic
CAediting_519991	chr7_933335_-	ncRNA_intronic
CAediting_519992	chr7_933336_-	ncRNA_intronic
CAediting_519993	chr7_933357_-	ncRNA_intronic
CAediting_519994	chr7_933390_-	ncRNA_intronic
CAediting_519995	chr7_936194_-	ncRNA_intronic
CAediting_519996	chr7_936195_-	ncRNA_intronic
CAediting_519997	chr7_936357_-	ncRNA_intronic
CAediting_519998	chr7_936419_-	ncRNA_intronic
CAediting_519999	chr7_936425_-	ncRNA_intronic
CAediting_520000	chr7_938212_-	ncRNA_intronic
CAediting_520001	chr7_938273_-	ncRNA_intronic
CAediting_520002	chr7_938278_-	ncRNA_intronic
CAediting_520003	chr7_938309_-	ncRNA_intronic
CAediting_520004	chr7_938381_-	ncRNA_intronic
CAediting_520005	chr7_938428_-	ncRNA_intronic
CAediting_520006	chr7_938432_-	ncRNA_intronic
CAediting_520007	chr7_938433_-	ncRNA_intronic
CAediting_520008	chr7_938441_-	ncRNA_intronic
CAediting_520009	chr7_938448_-	ncRNA_intronic
CAediting_520010	chr7_938454_-	ncRNA_intronic
CAediting_520011	chr7_938461_-	ncRNA_intronic
CAediting_520012	chr7_938477_-	ncRNA_intronic
CAediting_520013	chr7_939302_-	ncRNA_intronic
CAediting_520014	chr7_939574_-	ncRNA_intronic
CAediting_520015	chr7_940228_-	ncRNA_intronic
CAediting_520016	chr7_940256_-	ncRNA_intronic
CAediting_520017	chr7_944008_-	ncRNA_intronic
CAediting_520018	chr7_944012_-	ncRNA_intronic
CAediting_520019	chr7_944415_-	ncRNA_intronic
CAediting_520020	chr7_946949_-	ncRNA_intronic
CAediting_520021	chr7_947160_-	ncRNA_intronic
CAediting_520022	chr7_947164_-	ncRNA_intronic
CAediting_520023	chr7_947276_-	ncRNA_intronic
CAediting_520024	chr7_947324_-	ncRNA_intronic
CAediting_520025	chr7_947336_-	ncRNA_intronic
CAediting_520026	chr7_947352_-	ncRNA_intronic
CAediting_520027	chr7_948759_-	ncRNA_intronic
CAediting_520028	chr7_948782_-	ncRNA_intronic
CAediting_520029	chr7_948793_-	ncRNA_intronic
CAediting_520030	chr7_948794_-	ncRNA_intronic
CAediting_520031	chr7_948836_-	ncRNA_intronic
CAediting_520032	chr7_948861_-	ncRNA_intronic
CAediting_520033	chr7_948900_-	ncRNA_intronic
CAediting_520034	chr7_948901_-	ncRNA_intronic
CAediting_520035	chr7_951130_-	ncRNA_intronic
CAediting_520036	chr7_951207_-	ncRNA_intronic
CAediting_520037	chr7_951574_-	ncRNA_intronic
CAediting_520038	chr7_951635_-	ncRNA_intronic
CAediting_520039	chr7_951660_-	ncRNA_intronic
CAediting_520040	chr7_951728_-	ncRNA_intronic
CAediting_520041	chr7_951734_-	ncRNA_intronic
CAediting_520042	chr7_951852_-	ncRNA_intronic
CAediting_520043	chr7_951894_-	ncRNA_intronic
CAediting_520044	chr7_951899_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_519928	chr7_902202_-	SINE	Alu	AluSp
CAediting_519929	chr7_902224_-	SINE	Alu	AluSp
CAediting_519930	chr7_912777_-	SINE	Alu	AluSx3
CAediting_519931	chr7_912804_-	SINE	Alu	AluSx3
CAediting_519932	chr7_912925_-	SINE	Alu	AluJr
CAediting_519933	chr7_912964_-	SINE	Alu	AluJr
CAediting_519934	chr7_912968_-	SINE	Alu	AluJr
CAediting_519935	chr7_912973_-	SINE	Alu	AluJr
CAediting_519936	chr7_912977_-	SINE	Alu	AluJr
CAediting_519937	chr7_912989_-	SINE	Alu	AluJr
CAediting_519938	chr7_913069_-	SINE	Alu	AluJr
CAediting_519939	chr7_913263_-	SINE	Alu	AluY
CAediting_519940	chr7_913277_-	SINE	Alu	AluY
CAediting_519941	chr7_913312_-	SINE	Alu	AluY
CAediting_519942	chr7_913316_-	SINE	Alu	AluY
CAediting_519943	chr7_913473_-	SINE	Alu	AluY
CAediting_519944	chr7_913678_-	SINE	Alu	AluSx1
CAediting_519945	chr7_913690_-	SINE	Alu	AluSx1
CAediting_519946	chr7_913691_-	SINE	Alu	AluSx1
CAediting_519947	chr7_913752_-	SINE	Alu	AluSx1
CAediting_519948	chr7_913763_-	SINE	Alu	AluSx1
CAediting_519949	chr7_913811_-	SINE	Alu	AluSx1
CAediting_519950	chr7_913813_-	SINE	Alu	AluSx1
CAediting_519951	chr7_913823_-	SINE	Alu	AluSx1
CAediting_519952	chr7_913832_-	SINE	Alu	AluSx1
CAediting_519953	chr7_913835_-	SINE	Alu	AluSx1
CAediting_519954	chr7_913866_-	SINE	Alu	AluSx1
CAediting_519955	chr7_913883_-	SINE	Alu	AluSx1
CAediting_519956	chr7_913896_-	SINE	Alu	AluSx1
CAediting_519957	chr7_928024_-	SINE	Alu	AluJo
CAediting_519958	chr7_928194_-	SINE	Alu	AluJo
CAediting_519959	chr7_928358_-	SINE	Alu	FRAM
CAediting_519960	chr7_929100_-	SINE	Alu	AluSg
CAediting_519961	chr7_929488_-	SINE	Alu	FLAM_C
CAediting_519962	chr7_929489_-	SINE	Alu	FLAM_C
CAediting_519963	chr7_929860_-	SINE	Alu	AluJr
CAediting_519964	chr7_929972_-	SINE	Alu	AluJr
CAediting_519965	chr7_930009_-	SINE	Alu	AluJr
CAediting_519966	chr7_930562_-	SINE	Alu	AluSz6
CAediting_519967	chr7_930574_-	SINE	Alu	AluSz6
CAediting_519968	chr7_930602_-	SINE	Alu	AluSz6
CAediting_519969	chr7_930781_-	SINE	Alu	AluSz6
CAediting_519971	chr7_932983_-	SINE	Alu	AluJo
CAediting_519972	chr7_933027_-	SINE	Alu	AluSx
CAediting_519973	chr7_933037_-	SINE	Alu	AluSx
CAediting_519974	chr7_933080_-	SINE	Alu	AluSx
CAediting_519975	chr7_933092_-	SINE	Alu	AluSx
CAediting_519976	chr7_933105_-	SINE	Alu	AluSx
CAediting_519977	chr7_933108_-	SINE	Alu	AluSx
CAediting_519978	chr7_933147_-	SINE	Alu	AluSx
CAediting_519979	chr7_933162_-	SINE	Alu	AluSx
CAediting_519980	chr7_933171_-	SINE	Alu	AluSx
CAediting_519981	chr7_933184_-	SINE	Alu	AluSx
CAediting_519982	chr7_933185_-	SINE	Alu	AluSx
CAediting_519983	chr7_933188_-	SINE	Alu	AluSx
CAediting_519984	chr7_933189_-	SINE	Alu	AluSx
CAediting_519985	chr7_933208_-	SINE	Alu	AluSx
CAediting_519986	chr7_933263_-	SINE	Alu	AluSx
CAediting_519987	chr7_933309_-	SINE	Alu	AluJo
CAediting_519988	chr7_933313_-	SINE	Alu	AluJo
CAediting_519989	chr7_933322_-	SINE	Alu	AluJo
CAediting_519990	chr7_933330_-	SINE	Alu	AluJo
CAediting_519991	chr7_933335_-	SINE	Alu	AluJo
CAediting_519992	chr7_933336_-	SINE	Alu	AluJo
CAediting_519993	chr7_933357_-	SINE	Alu	AluJo
CAediting_519995	chr7_936194_-	SINE	Alu	AluY
CAediting_519996	chr7_936195_-	SINE	Alu	AluY
CAediting_519997	chr7_936357_-	SINE	Alu	AluSz
CAediting_519998	chr7_936419_-	SINE	Alu	AluSz
CAediting_519999	chr7_936425_-	SINE	Alu	AluSz
CAediting_520000	chr7_938212_-	SINE	Alu	AluJo
CAediting_520001	chr7_938273_-	SINE	Alu	AluJo
CAediting_520002	chr7_938278_-	SINE	Alu	AluJo
CAediting_520003	chr7_938309_-	SINE	Alu	AluJo
CAediting_520004	chr7_938381_-	SINE	Alu	AluJo
CAediting_520005	chr7_938428_-	SINE	Alu	AluJo
CAediting_520006	chr7_938432_-	SINE	Alu	AluJo
CAediting_520007	chr7_938433_-	SINE	Alu	AluJo
CAediting_520008	chr7_938441_-	SINE	Alu	AluJo
CAediting_520009	chr7_938448_-	SINE	Alu	AluJo
CAediting_520010	chr7_938454_-	SINE	Alu	AluJo
CAediting_520011	chr7_938461_-	SINE	Alu	AluJo
CAediting_520012	chr7_938477_-	SINE	Alu	AluJo
CAediting_520013	chr7_939302_-	SINE	Alu	AluSq2
CAediting_520014	chr7_939574_-	SINE	Alu	AluSx1
CAediting_520015	chr7_940228_-	SINE	Alu	AluJb
CAediting_520016	chr7_940256_-	SINE	Alu	AluJb
CAediting_520017	chr7_944008_-	SINE	Alu	AluJr
CAediting_520018	chr7_944012_-	SINE	Alu	AluJr
CAediting_520019	chr7_944415_-	SINE	Alu	AluSx1
CAediting_520020	chr7_946949_-	SINE	Alu	FLAM_C
CAediting_520021	chr7_947160_-	SINE	Alu	AluJb
CAediting_520022	chr7_947164_-	SINE	Alu	AluJb
CAediting_520023	chr7_947276_-	SINE	Alu	AluJb
CAediting_520024	chr7_947324_-	SINE	Alu	AluJb
CAediting_520025	chr7_947336_-	SINE	Alu	AluJb
CAediting_520026	chr7_947352_-	SINE	Alu	AluJb
CAediting_520027	chr7_948759_-	SINE	Alu	AluSg
CAediting_520028	chr7_948782_-	SINE	Alu	AluSg
CAediting_520029	chr7_948793_-	SINE	Alu	AluSg
CAediting_520030	chr7_948794_-	SINE	Alu	AluSg
CAediting_520031	chr7_948836_-	SINE	Alu	AluSg
CAediting_520032	chr7_948861_-	SINE	Alu	AluSg
CAediting_520033	chr7_948900_-	SINE	Alu	AluSg
CAediting_520034	chr7_948901_-	SINE	Alu	AluSg
CAediting_520035	chr7_951130_-	SINE	Alu	AluY
CAediting_520036	chr7_951207_-	SINE	Alu	AluY
CAediting_520037	chr7_951574_-	SINE	Alu	AluJr
CAediting_520038	chr7_951635_-	SINE	Alu	AluJr
CAediting_520039	chr7_951660_-	SINE	Alu	AluJr
CAediting_520040	chr7_951728_-	SINE	Alu	AluJr
CAediting_520041	chr7_951734_-	SINE	Alu	AluJr
CAediting_520042	chr7_951852_-	SINE	Alu	FRAM
CAediting_520043	chr7_951894_-	SINE	Alu	FRAM
CAediting_520044	chr7_951899_-	SINE	Alu	FRAM

Top

RNA A-to-I editing events in the alternative splicing sites for ADAP1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000105963.12.ADAP1.

Correlation between RNA A-to-I editing and PSI for ENSG00000105963.12.ADAP1.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for ADAP1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for ADAP1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for ADAP1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_396018	chr5_1062918_-	ENSG00000105963.12	ENST00000617043	hsa-miR-4635	898743	898749	7mer-m8	898742	898764	152	-20.33
CAediting_396018	chr5_1062918_-	ENSG00000105963.12	ENST00000449296	hsa-miR-4635	898743	898749	7mer-m8	898742	898764	152	-20.33
CAediting_396018	chr5_1062918_-	ENSG00000105963.12	ENST00000611167	hsa-miR-4635	898743	898749	7mer-m8	898742	898764	152	-20.33
CAediting_396018	chr5_1062918_-	ENSG00000105963.12	ENST00000539900	hsa-miR-4635	898743	898749	7mer-m8	898742	898764	152	-20.33
CAediting_396018	chr5_1062918_-	ENSG00000105963.12	ENST00000446141	hsa-miR-4635	898743	898749	7mer-m8	898742	898764	152	-20.33

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1054808	chr15_66496985_-	ENSG00000105963.12	ENST00000617043	hsa-miR-4512	898725	898731	7mer-m8	898724	898745	149	-26.59
CAediting_468389	chr6_31355314_-	ENSG00000105963.12	ENST00000617043	hsa-miR-6891-5p	898130	898135	6mer	898129	898147	141	-17.42
CAediting_1054808	chr15_66496985_-	ENSG00000105963.12	ENST00000449296	hsa-miR-4512	898725	898731	7mer-m8	898724	898745	149	-26.59
CAediting_468389	chr6_31355314_-	ENSG00000105963.12	ENST00000449296	hsa-miR-6891-5p	898130	898135	6mer	898129	898147	141	-17.42
CAediting_1054808	chr15_66496985_-	ENSG00000105963.12	ENST00000611167	hsa-miR-4512	898725	898731	7mer-m8	898724	898745	149	-26.59
CAediting_468389	chr6_31355314_-	ENSG00000105963.12	ENST00000611167	hsa-miR-6891-5p	898130	898135	6mer	898129	898147	141	-17.42
CAediting_1054808	chr15_66496985_-	ENSG00000105963.12	ENST00000539900	hsa-miR-4512	898725	898731	7mer-m8	898724	898745	149	-26.59
CAediting_468389	chr6_31355314_-	ENSG00000105963.12	ENST00000539900	hsa-miR-6891-5p	898130	898135	6mer	898129	898147	141	-17.42
CAediting_1054808	chr15_66496985_-	ENSG00000105963.12	ENST00000446141	hsa-miR-4512	898725	898731	7mer-m8	898724	898745	149	-26.59
CAediting_468389	chr6_31355314_-	ENSG00000105963.12	ENST00000446141	hsa-miR-6891-5p	898130	898135	6mer	898129	898147	141	-17.42

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for ADAP1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for ADAP1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
STAD	CAediting_519983	chr7_933188_-	0.00715705183300985	0.375798277712959	.	.	.	.
STAD	CAediting_519989	chr7_933322_-	0.000554820907858344	0.439621996467737	.	.	.	.

Top

Relation with cancer stages for ADAP1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for ADAP1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for ADAP1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for ADAP1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene