CAeditome Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: BLCAP (CAeditome ID:10904)

Gene summary for BLCAP

check button Gene summary
Gene informationGene symbol

BLCAP

Gene ID

10904

Gene nameBLCAP apoptosis inducing factor
SynonymsBC10
Cytomap

20q11.23

Type of geneprotein-coding
Descriptionbladder cancer-associated proteinbladder cancer associated proteinbladder cancer related protein (10kD)
Modification date20210518
UniProtAcc

P62952

Context- 28455960(A-to-I RNA editing of BLCAP lost the inhibition to STAT3 activation in cervical cancer)

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
BLCAP

GO:0030262

Bladder cancer-associated protein

17031575


Top

RNA A-to-I events for BLCAP

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000166619.11
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1426854(37494612, -), CAediting_1426855(37494685, -), CAediting_1426856(37494702, -), CAediting_1426857(37494779, -), CAediting_1426858(37494841, -), CAediting_1426859(37494855, -), CAediting_1426860(37495419, -), CAediting_1426861(37495465, -), CAediting_1426862(37496061, -), CAediting_1426863(37496081, -), CAediting_1426864(37496090, -), CAediting_1426865(37496092, -), CAediting_1426866(37496095, -), CAediting_1426867(37496180, -), CAediting_1426868(37496186, -), CAediting_1426869(37499076, -), CAediting_1426870(37501409, -), CAediting_1426871(37501410, -), CAediting_1426872(37501430, -), CAediting_1426873(37501435, -), CAediting_1426874(37501444, -), CAediting_1426875(37501447, -), CAediting_1426876(37501455, -), CAediting_1426877(37501459, -), CAediting_1426878(37501500, -), CAediting_1426879(37501506, -), CAediting_1426880(37501545, -), CAediting_1426881(37501571, -), CAediting_1426882(37501582, -), CAediting_1426883(37504912, -), CAediting_1426884(37504931, -), CAediting_1426885(37504932, -), CAediting_1426886(37504940, -), CAediting_1426887(37504941, -), CAediting_1426888(37504942, -), CAediting_1426889(37504955, -), CAediting_1426890(37504964, -), CAediting_1426891(37504967, -), CAediting_1426892(37504968, -), CAediting_1426893(37504987, -), CAediting_1426894(37504993, -), CAediting_1426895(37505005, -), CAediting_1426896(37505013, -), CAediting_1426897(37505015, -), CAediting_1426898(37505017, -), CAediting_1426899(37505019, -), CAediting_1426900(37507928, -), CAediting_1426901(37507936, -), CAediting_1426902(37507975, -), CAediting_1426903(37507979, -), CAediting_1426904(37507980, -), CAediting_1426905(37507985, -), CAediting_1426906(37507993, -), CAediting_1426907(37507996, -), CAediting_1426908(37508002, -), CAediting_1426909(37508010, -), CAediting_1426910(37508011, -), CAediting_1426911(37508018, -), CAediting_1426912(37508024, -), CAediting_1426913(37509981, -), CAediting_1426914(37510035, -), CAediting_1426915(37510036, -), CAediting_1426916(37510037, -), CAediting_1426917(37510048, -), CAediting_1426918(37510054, -), CAediting_1426919(37510058, -), CAediting_1426920(37510076, -), CAediting_1426921(37510077, -), CAediting_1426922(37510133, -), CAediting_1426923(37510135, -), CAediting_1426924(37510136, -), CAediting_1426925(37510158, -), CAediting_1426926(37510191, -), CAediting_1426927(37510213, -), CAediting_1426928(37510215, -), CAediting_1426929(37510235, -), CAediting_1426930(37519132, -), CAediting_1426931(37519161, -), CAediting_1426932(37519233, -), CAediting_1426933(37519673, -), CAediting_1426934(37519678, -), CAediting_1426935(37519685, -), CAediting_1426936(37519688, -), CAediting_1426937(37519694, -), CAediting_1426938(37519741, -),

Top

RNA editing positional annotations for BLCAP using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
CAediting_1426930chr20_37519132_-nonsynonymous SNVENST00000373537.5c.A43Gp.K15EDPD
CAediting_1426930chr20_37519132_-nonsynonymous SNVENST00000397131.1c.A43Gp.K15EDPD
CAediting_1426930chr20_37519132_-nonsynonymous SNVENST00000397134.1c.A43Gp.K15EDPD
CAediting_1426930chr20_37519132_-nonsynonymous SNVENST00000397135.1c.A43Gp.K15EDPD
CAediting_1426930chr20_37519132_-nonsynonymous SNVENST00000397137.4c.A43Gp.K15EDPD
CAediting_1426930chr20_37519132_-nonsynonymous SNVENST00000414080.1c.A43Gp.K15EDPD
CAediting_1426930chr20_37519132_-nonsynonymous SNVENST00000414542.5c.A43Gp.K15EDPD
CAediting_1426930chr20_37519132_-nonsynonymous SNVENST00000432507.1c.A43Gp.K15EDPD
CAediting_1426930chr20_37519132_-nonsynonymous SNVENST00000445723.4c.A43Gp.K15EDPD
CAediting_1426931chr20_37519161_-nonsynonymous SNVENST00000373537.5c.A14Gp.Q5RDDD
CAediting_1426931chr20_37519161_-nonsynonymous SNVENST00000397131.1c.A14Gp.Q5RDDD
CAediting_1426931chr20_37519161_-nonsynonymous SNVENST00000397134.1c.A14Gp.Q5RDDD
CAediting_1426931chr20_37519161_-nonsynonymous SNVENST00000397135.1c.A14Gp.Q5RDDD
CAediting_1426931chr20_37519161_-nonsynonymous SNVENST00000397137.4c.A14Gp.Q5RDDD
CAediting_1426931chr20_37519161_-nonsynonymous SNVENST00000414080.1c.A14Gp.Q5RDDD
CAediting_1426931chr20_37519161_-nonsynonymous SNVENST00000414542.5c.A14Gp.Q5RDDD
CAediting_1426931chr20_37519161_-nonsynonymous SNVENST00000432507.1c.A14Gp.Q5RDDD
CAediting_1426931chr20_37519161_-nonsynonymous SNVENST00000445723.4c.A14Gp.Q5RDDD
CAediting_1426931chr20_37519161_-nonsynonymous SNVENST00000456058.1c.A14Gp.Q5RDDD

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1426854chr20_37494612_-ncRNA_intronic
CAediting_1426855chr20_37494685_-ncRNA_intronic
CAediting_1426856chr20_37494702_-ncRNA_intronic
CAediting_1426857chr20_37494779_-ncRNA_intronic
CAediting_1426858chr20_37494841_-ncRNA_intronic
CAediting_1426859chr20_37494855_-ncRNA_intronic
CAediting_1426860chr20_37495419_-ncRNA_intronic
CAediting_1426861chr20_37495465_-ncRNA_intronic
CAediting_1426862chr20_37496061_-ncRNA_intronic
CAediting_1426863chr20_37496081_-ncRNA_intronic
CAediting_1426864chr20_37496090_-ncRNA_intronic
CAediting_1426865chr20_37496092_-ncRNA_intronic
CAediting_1426866chr20_37496095_-ncRNA_intronic
CAediting_1426867chr20_37496180_-ncRNA_intronic
CAediting_1426868chr20_37496186_-ncRNA_intronic
CAediting_1426869chr20_37499076_-ncRNA_intronic
CAediting_1426870chr20_37501409_-ncRNA_exonic
CAediting_1426871chr20_37501410_-ncRNA_exonic
CAediting_1426872chr20_37501430_-ncRNA_exonic
CAediting_1426873chr20_37501435_-ncRNA_exonic
CAediting_1426874chr20_37501444_-ncRNA_exonic
CAediting_1426875chr20_37501447_-ncRNA_exonic
CAediting_1426876chr20_37501455_-ncRNA_exonic
CAediting_1426877chr20_37501459_-ncRNA_exonic
CAediting_1426878chr20_37501500_-ncRNA_exonic
CAediting_1426879chr20_37501506_-ncRNA_exonic
CAediting_1426880chr20_37501545_-ncRNA_exonic
CAediting_1426881chr20_37501571_-ncRNA_exonic
CAediting_1426882chr20_37501582_-ncRNA_exonic
CAediting_1426883chr20_37504912_-ncRNA_intronic
CAediting_1426884chr20_37504931_-ncRNA_intronic
CAediting_1426885chr20_37504932_-ncRNA_intronic
CAediting_1426886chr20_37504940_-ncRNA_intronic
CAediting_1426887chr20_37504941_-ncRNA_intronic
CAediting_1426888chr20_37504942_-ncRNA_intronic
CAediting_1426889chr20_37504955_-ncRNA_intronic
CAediting_1426890chr20_37504964_-ncRNA_intronic
CAediting_1426891chr20_37504967_-ncRNA_intronic
CAediting_1426892chr20_37504968_-ncRNA_intronic
CAediting_1426893chr20_37504987_-ncRNA_intronic
CAediting_1426894chr20_37504993_-ncRNA_intronic
CAediting_1426895chr20_37505005_-ncRNA_intronic
CAediting_1426896chr20_37505013_-ncRNA_intronic
CAediting_1426897chr20_37505015_-ncRNA_intronic
CAediting_1426898chr20_37505017_-ncRNA_intronic
CAediting_1426899chr20_37505019_-ncRNA_intronic
CAediting_1426900chr20_37507928_-ncRNA_intronic
CAediting_1426901chr20_37507936_-ncRNA_intronic
CAediting_1426902chr20_37507975_-ncRNA_intronic
CAediting_1426903chr20_37507979_-ncRNA_intronic
CAediting_1426904chr20_37507980_-ncRNA_intronic
CAediting_1426905chr20_37507985_-ncRNA_intronic
CAediting_1426906chr20_37507993_-ncRNA_intronic
CAediting_1426907chr20_37507996_-ncRNA_intronic
CAediting_1426908chr20_37508002_-ncRNA_intronic
CAediting_1426909chr20_37508010_-ncRNA_intronic
CAediting_1426910chr20_37508011_-ncRNA_intronic
CAediting_1426911chr20_37508018_-ncRNA_intronic
CAediting_1426912chr20_37508024_-ncRNA_intronic
CAediting_1426913chr20_37509981_-ncRNA_intronic
CAediting_1426914chr20_37510035_-ncRNA_intronic
CAediting_1426915chr20_37510036_-ncRNA_intronic
CAediting_1426916chr20_37510037_-ncRNA_intronic
CAediting_1426917chr20_37510048_-ncRNA_intronic
CAediting_1426918chr20_37510054_-ncRNA_intronic
CAediting_1426919chr20_37510058_-ncRNA_intronic
CAediting_1426920chr20_37510076_-ncRNA_intronic
CAediting_1426921chr20_37510077_-ncRNA_intronic
CAediting_1426922chr20_37510133_-ncRNA_intronic
CAediting_1426923chr20_37510135_-ncRNA_intronic
CAediting_1426924chr20_37510136_-ncRNA_intronic
CAediting_1426925chr20_37510158_-ncRNA_intronic
CAediting_1426926chr20_37510191_-ncRNA_intronic
CAediting_1426927chr20_37510213_-ncRNA_intronic
CAediting_1426928chr20_37510215_-ncRNA_intronic
CAediting_1426929chr20_37510235_-ncRNA_intronic
CAediting_1426930chr20_37519132_-exonic
CAediting_1426931chr20_37519161_-exonic
CAediting_1426932chr20_37519233_-ncRNA_exonic
CAediting_1426933chr20_37519673_-ncRNA_intronic
CAediting_1426934chr20_37519678_-ncRNA_intronic
CAediting_1426935chr20_37519685_-ncRNA_intronic
CAediting_1426936chr20_37519688_-ncRNA_intronic
CAediting_1426937chr20_37519694_-ncRNA_intronic
CAediting_1426938chr20_37519741_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1426854chr20_37494612_-SINEAluAluSx
CAediting_1426855chr20_37494685_-SINEAluAluSx
CAediting_1426856chr20_37494702_-SINEAluAluSx
CAediting_1426857chr20_37494779_-SINEAluAluSx
CAediting_1426858chr20_37494841_-SINEAluAluSx
CAediting_1426859chr20_37494855_-SINEAluAluSx
CAediting_1426860chr20_37495419_-SINEAluAluJo
CAediting_1426861chr20_37495465_-SINEAluAluJo
CAediting_1426862chr20_37496061_-SINEAluAluJb
CAediting_1426863chr20_37496081_-SINEAluAluJb
CAediting_1426864chr20_37496090_-SINEAluAluJb
CAediting_1426865chr20_37496092_-SINEAluAluJb
CAediting_1426866chr20_37496095_-SINEAluAluJb
CAediting_1426867chr20_37496180_-SINEAluAluJb
CAediting_1426868chr20_37496186_-SINEAluAluJb
CAediting_1426869chr20_37499076_-SINEAluAluSg
CAediting_1426870chr20_37501409_-SINEAluAluSz
CAediting_1426871chr20_37501410_-SINEAluAluSz
CAediting_1426872chr20_37501430_-SINEAluAluSz
CAediting_1426873chr20_37501435_-SINEAluAluSz
CAediting_1426874chr20_37501444_-SINEAluAluSz
CAediting_1426875chr20_37501447_-SINEAluAluSz
CAediting_1426876chr20_37501455_-SINEAluAluSz
CAediting_1426877chr20_37501459_-SINEAluAluSz
CAediting_1426878chr20_37501500_-SINEAluAluSz
CAediting_1426879chr20_37501506_-SINEAluAluSz
CAediting_1426880chr20_37501545_-SINEAluAluSz
CAediting_1426881chr20_37501571_-SINEAluAluSz
CAediting_1426882chr20_37501582_-SINEAluAluSz
CAediting_1426883chr20_37504912_-SINEAluAluJo
CAediting_1426884chr20_37504931_-SINEAluAluJo
CAediting_1426885chr20_37504932_-SINEAluAluJo
CAediting_1426886chr20_37504940_-SINEAluAluJo
CAediting_1426887chr20_37504941_-SINEAluAluJo
CAediting_1426888chr20_37504942_-SINEAluAluJo
CAediting_1426889chr20_37504955_-SINEAluAluJo
CAediting_1426890chr20_37504964_-SINEAluAluJo
CAediting_1426891chr20_37504967_-SINEAluAluJo
CAediting_1426892chr20_37504968_-SINEAluAluJo
CAediting_1426893chr20_37504987_-SINEAluAluJo
CAediting_1426894chr20_37504993_-SINEAluAluJo
CAediting_1426895chr20_37505005_-SINEAluAluJo
CAediting_1426896chr20_37505013_-SINEAluAluJo
CAediting_1426897chr20_37505015_-SINEAluAluJo
CAediting_1426898chr20_37505017_-SINEAluAluJo
CAediting_1426899chr20_37505019_-SINEAluAluJo
CAediting_1426900chr20_37507928_-SINEAluAluJo
CAediting_1426901chr20_37507936_-SINEAluAluJo
CAediting_1426902chr20_37507975_-SINEAluAluJo
CAediting_1426903chr20_37507979_-SINEAluAluJo
CAediting_1426904chr20_37507980_-SINEAluAluJo
CAediting_1426905chr20_37507985_-SINEAluAluJo
CAediting_1426906chr20_37507993_-SINEAluAluJo
CAediting_1426907chr20_37507996_-SINEAluAluJo
CAediting_1426908chr20_37508002_-SINEAluAluJo
CAediting_1426909chr20_37508010_-SINEAluAluJo
CAediting_1426910chr20_37508011_-SINEAluAluJo
CAediting_1426911chr20_37508018_-SINEAluAluJo
CAediting_1426912chr20_37508024_-SINEAluAluJo
CAediting_1426913chr20_37509981_-SINEAluAluSz6
CAediting_1426914chr20_37510035_-SINEAluAluSz6
CAediting_1426915chr20_37510036_-SINEAluAluSz6
CAediting_1426916chr20_37510037_-SINEAluAluSz6
CAediting_1426917chr20_37510048_-SINEAluAluSz6
CAediting_1426918chr20_37510054_-SINEAluAluSz6
CAediting_1426919chr20_37510058_-SINEAluAluSz6
CAediting_1426920chr20_37510076_-SINEAluAluSz6
CAediting_1426921chr20_37510077_-SINEAluAluSz6
CAediting_1426922chr20_37510133_-SINEAluAluSz6
CAediting_1426923chr20_37510135_-SINEAluAluSz6
CAediting_1426924chr20_37510136_-SINEAluAluSz6
CAediting_1426925chr20_37510158_-SINEAluAluSz6
CAediting_1426926chr20_37510191_-SINEAluAluSz6
CAediting_1426927chr20_37510213_-SINEAluAluSz6
CAediting_1426928chr20_37510215_-SINEAluAluSz6
CAediting_1426929chr20_37510235_-SINEAluAluSz6

Top

RNA A-to-I editing events in the alternative splicing sites for BLCAP

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_1426932chr20_37519233_-37519225:375192335SS3+0iAGGTCGGTT-18.81GGGTCGGTT-20.88
IRCAediting_1426932chr20_37519233_-37519225:375192335SS3+0iAGGTCGGTT-18.81GGGTCGGTT-20.88

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000166619.11.BLCAP.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000166619.11.BLCAP.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for BLCAP

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
LUSC.CAediting_1426931.ENSG00000166619.BLCAP.png
Soverview

Top

Protein coding region RNA A-to-I editings for BLCAP

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for BLCAP

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000166619.11ENST00000397137hsa-miR-200b-3p37518114375181207mer-m83751811337518133152-18.44
CAediting_393chr1_1167164_+ENSG00000166619.11ENST00000373537hsa-miR-200b-3p37518114375181207mer-m83751811337518133152-18.44
CAediting_393chr1_1167164_+ENSG00000166619.11ENST00000414542hsa-miR-200b-3p37518114375181207mer-m83751811337518133152-18.44
CAediting_1229413chr17_67471544_+ENSG00000166619.11ENST00000397137hsa-miR-548aa37518479375184857mer-m83751847837518502147-9.98
CAediting_1229414chr17_67471546_+ENSG00000166619.11ENST00000397137hsa-miR-548aa37518700375187067mer-m83751869937518724162-15.67
CAediting_1351755chr19_40282625_-ENSG00000166619.11ENST00000397137hsa-miR-64137518135375181406mer3751813437518154141-22.08
CAediting_396018chr5_1062918_-ENSG00000166619.11ENST00000397137hsa-miR-463537518215375182206mer3751821437518235141-26.07
CAediting_524911chr7_5495852_-ENSG00000166619.11ENST00000397137hsa-miR-589-3p37518121375181277mer-m83751812037518143148-19.74
CAediting_1229413chr17_67471544_+ENSG00000166619.11ENST00000373537hsa-miR-548aa37518479375184857mer-m83751847837518502147-9.98
CAediting_1229414chr17_67471546_+ENSG00000166619.11ENST00000373537hsa-miR-548aa37518700375187067mer-m83751869937518724162-15.67
CAediting_1351755chr19_40282625_-ENSG00000166619.11ENST00000373537hsa-miR-64137518135375181406mer3751813437518154141-22.08
CAediting_396018chr5_1062918_-ENSG00000166619.11ENST00000373537hsa-miR-463537518215375182206mer3751821437518235141-26.07
CAediting_524911chr7_5495852_-ENSG00000166619.11ENST00000373537hsa-miR-589-3p37518121375181277mer-m83751812037518143148-19.74
CAediting_1229413chr17_67471544_+ENSG00000166619.11ENST00000414542hsa-miR-548aa37518479375184857mer-m83751847837518502147-9.98
CAediting_1229414chr17_67471546_+ENSG00000166619.11ENST00000414542hsa-miR-548aa37518700375187067mer-m83751869937518724162-15.67
CAediting_1351755chr19_40282625_-ENSG00000166619.11ENST00000414542hsa-miR-64137518135375181406mer3751813437518154141-22.08
CAediting_396018chr5_1062918_-ENSG00000166619.11ENST00000414542hsa-miR-463537518215375182206mer3751821437518235141-26.07
CAediting_524911chr7_5495852_-ENSG00000166619.11ENST00000414542hsa-miR-589-3p37518121375181277mer-m83751812037518143148-19.74
CAediting_468389chr6_31355314_-ENSG00000166619.11ENST00000397137hsa-miR-6891-5p37518496375185027mer-1a3751848537518502143-28.13
CAediting_468389chr6_31355314_-ENSG00000166619.11ENST00000373537hsa-miR-6891-5p37518496375185027mer-1a3751848537518502143-28.13
CAediting_468389chr6_31355314_-ENSG00000166619.11ENST00000414542hsa-miR-6891-5p37518496375185027mer-1a3751848537518502143-28.13

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000166619.11ENST00000397137hsa-miR-200b-3p37518287375182937mer-m83751828637518307140-9.17
CAediting_1524209chrX_134546392_-ENSG00000166619.11ENST00000397137hsa-miR-503-5p37517701375177066mer3751770037517723144-22.59
CAediting_524911chr7_5495852_-ENSG00000166619.11ENST00000397137hsa-miR-589-3p37518682375186887mer-m83751868137518704149-16.32
CAediting_1351755chr19_40282625_-ENSG00000166619.11ENST00000397137hsa-miR-64137518318375183247mer-m83751831737518340140-11.7
CAediting_468389chr6_31355314_-ENSG00000166619.11ENST00000397137hsa-miR-6891-5p37518537375185437mer-m83751853637518556155-29.44
CAediting_468389chr6_31355314_-ENSG00000166619.11ENST00000397137hsa-miR-6891-5p37518523375185286mer3751851837518536141-19.45
CAediting_393chr1_1167164_+ENSG00000166619.11ENST00000373537hsa-miR-200b-3p37518287375182937mer-m83751828637518307140-9.17
CAediting_1524209chrX_134546392_-ENSG00000166619.11ENST00000373537hsa-miR-503-5p37517701375177066mer3751770037517723144-22.59
CAediting_524911chr7_5495852_-ENSG00000166619.11ENST00000373537hsa-miR-589-3p37518682375186887mer-m83751868137518704149-16.32
CAediting_1351755chr19_40282625_-ENSG00000166619.11ENST00000373537hsa-miR-64137518318375183247mer-m83751831737518340140-11.7
CAediting_468389chr6_31355314_-ENSG00000166619.11ENST00000373537hsa-miR-6891-5p37518537375185437mer-m83751853637518556155-29.44
CAediting_468389chr6_31355314_-ENSG00000166619.11ENST00000373537hsa-miR-6891-5p37518523375185286mer3751851837518536141-19.45
CAediting_393chr1_1167164_+ENSG00000166619.11ENST00000414542hsa-miR-200b-3p37518287375182937mer-m83751828637518307140-9.17
CAediting_1524209chrX_134546392_-ENSG00000166619.11ENST00000414542hsa-miR-503-5p37517701375177066mer3751770037517723144-22.59
CAediting_524911chr7_5495852_-ENSG00000166619.11ENST00000414542hsa-miR-589-3p37518682375186887mer-m83751868137518704149-16.32
CAediting_1351755chr19_40282625_-ENSG00000166619.11ENST00000414542hsa-miR-64137518318375183247mer-m83751831737518340140-11.7
CAediting_468389chr6_31355314_-ENSG00000166619.11ENST00000414542hsa-miR-6891-5p37518537375185437mer-m83751853637518556155-29.44
CAediting_468389chr6_31355314_-ENSG00000166619.11ENST00000414542hsa-miR-6891-5p37518523375185286mer3751851837518536141-19.45

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for BLCAP

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

Top

Relation with ADAR for BLCAP

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BLCACAediting_1426891chr20_37504967_-0.0001940566093740130.417498570618533....
ESCACAediting_1426891chr20_37504967_-0.01001542868061250.30167488782441....
BLCACAediting_1426897chr20_37505015_-..0.03396635793162960.217819798525013..
BRCACAediting_1426931chr20_37519161_-..0.009080113541039220.159395344110155..
LUSCCAediting_1426931chr20_37519161_-..2.37594011408312e-090.675320838970894..
BLCACAediting_1426934chr20_37519678_-..0.001971272022962350.34300150602047..

Top

Relation with cancer stages for BLCAP

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BLCApathologic_stageCAediting_1426931chr20_37519161_-0.03033522282665180.292323808778754
BLCApathologic_stageCAediting_1426934chr20_37519678_-0.0114075697421340.285092787426658
COADpathologic_stageCAediting_1426891chr20_37504967_-0.04790431797728890.26557209371935
COADpathologic_stageCAediting_1426897chr20_37505015_-0.03698559681619140.257334729938613

Top

Relation with survival for BLCAP

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
UCECCAediting_1426931chr20_37519161_-0.01016990848393050.02925313.50804e-10

Top

RelatedDrugs for BLCAP

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for BLCAP

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource