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Editing gene: SDCCAG8 (CAeditome ID:10806)

Gene summary for SDCCAG8

Gene summary

Gene information	Gene symbol	SDCCAG8
	Gene ID	10806
	Gene name	SHH signaling and ciliogenesis regulator SDCCAG8
	Synonyms	BBS16\|CCCAP\|CCCAP SLSN7\|HSPC085\|NPHP10\|NY-CO-8\|SLSN7\|hCCCAP
	Cytomap	1q43-q44
	Type of gene	protein-coding
	Description	serologically defined colon cancer antigen 8Bardet-Biedl syndrome 16antigen NY-CO-8centrosomal colon cancer autoantigen proteinnephrocystin 10
	Modification date	20210518
	UniProtAcc	Q86SQ7
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
SDCCAG8	GO:0005813	Serologically defined colon cancer antigen 8	0000052
SDCCAG8	GO:0005813	Serologically defined colon cancer antigen 8	21399614
SDCCAG8	GO:0005814	Serologically defined colon cancer antigen 8	20835237
SDCCAG8	GO:0005911	Serologically defined colon cancer antigen 8	20835237

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RNA A-to-I events for SDCCAG8

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000054282.14

RNA A-to-I editing events in Cancer.

CAediting_150160(243258456, +), CAediting_150161(243258505, +), CAediting_150162(243258516, +), CAediting_150163(243258530, +), CAediting_150164(243258534, +), CAediting_150165(243258544, +), CAediting_150166(243258550, +), CAediting_150167(243258640, +), CAediting_150168(243258667, +), CAediting_150169(243262236, +), CAediting_150170(243262246, +), CAediting_150171(243262248, +), CAediting_150172(243264503, +), CAediting_150173(243264507, +), CAediting_150174(243265627, +), CAediting_150175(243265692, +), CAediting_150176(243265693, +), CAediting_150177(243265698, +), CAediting_150178(243265741, +), CAediting_150179(243265762, +), CAediting_150180(243265763, +), CAediting_150181(243266338, +), CAediting_150182(243266348, +), CAediting_150183(243266356, +), CAediting_150184(243266367, +), CAediting_150185(243266368, +), CAediting_150186(243266381, +), CAediting_150187(243266391, +), CAediting_150188(243266416, +), CAediting_150189(243266421, +), CAediting_150190(243266446, +), CAediting_150191(243266450, +), CAediting_150192(243266456, +), CAediting_150193(243266462, +), CAediting_150194(243266464, +), CAediting_150195(243266466, +), CAediting_150196(243266549, +), CAediting_150197(243266554, +), CAediting_150198(243266563, +), CAediting_150199(243266567, +), CAediting_150200(243266582, +), CAediting_150201(243266594, +), CAediting_150202(243266596, +), CAediting_150203(243266700, +), CAediting_150204(243266701, +), CAediting_150205(243266706, +), CAediting_150206(243266822, +), CAediting_150207(243266823, +), CAediting_150208(243266828, +), CAediting_150209(243266832, +), CAediting_150210(243266836, +), CAediting_150211(243266845, +), CAediting_150212(243266858, +), CAediting_150213(243266875, +), CAediting_150214(243266887, +), CAediting_150215(243266989, +), CAediting_150216(243266990, +), CAediting_150217(243267006, +), CAediting_150218(243267016, +), CAediting_150219(243267028, +), CAediting_150220(243267029, +), CAediting_150221(243267033, +), CAediting_150222(243267042, +), CAediting_150223(243267059, +), CAediting_150224(243267067, +), CAediting_150225(243267083, +), CAediting_150226(243267084, +), CAediting_150227(243267090, +), CAediting_150228(243267092, +), CAediting_150229(243267093, +), CAediting_150230(243267096, +), CAediting_150231(243267116, +), CAediting_150232(243267122, +), CAediting_150233(243267128, +), CAediting_150234(243267149, +), CAediting_150235(243267155, +), CAediting_150236(243267163, +), CAediting_150237(243267164, +), CAediting_150238(243267177, +), CAediting_150239(243267188, +), CAediting_150240(243267192, +), CAediting_150241(243267193, +), CAediting_150242(243288226, +), CAediting_150243(243288301, +), CAediting_150244(243296135, +), CAediting_150245(243302198, +), CAediting_150246(243305051, +), CAediting_150247(243305084, +), CAediting_150248(243305087, +), CAediting_150249(243305096, +), CAediting_150250(243305129, +), CAediting_150251(243305140, +), CAediting_150252(243305149, +), CAediting_150253(243305158, +), CAediting_150254(243305171, +), CAediting_150255(243305174, +), CAediting_150256(243305184, +), CAediting_150257(243305211, +), CAediting_150258(243305216, +), CAediting_150259(243305217, +), CAediting_150260(243305220, +), CAediting_150261(243305249, +), CAediting_150262(243305250, +), CAediting_150263(243305260, +), CAediting_150264(243305327, +), CAediting_150265(243305825, +), CAediting_150266(243305833, +), CAediting_150267(243305834, +), CAediting_150268(243305839, +), CAediting_150269(243305840, +), CAediting_150270(243305842, +), CAediting_150271(243305851, +), CAediting_150272(243305855, +), CAediting_150273(243305874, +), CAediting_150274(243305879, +), CAediting_150275(243305880, +), CAediting_150276(243305888, +), CAediting_150277(243305890, +), CAediting_150278(243305893, +), CAediting_150279(243305902, +), CAediting_150280(243305903, +), CAediting_150281(243305910, +), CAediting_150282(243305911, +), CAediting_150283(243305913, +), CAediting_150284(243305924, +), CAediting_150285(243305928, +), CAediting_150286(243305929, +), CAediting_150287(243305930, +), CAediting_150288(243305936, +), CAediting_150289(243305938, +), CAediting_150290(243305939, +), CAediting_150291(243305958, +), CAediting_150292(243305960, +), CAediting_150293(243305962, +), CAediting_150294(243305968, +), CAediting_150295(243305978, +), CAediting_150296(243305982, +), CAediting_150297(243306001, +), CAediting_150298(243306006, +), CAediting_150299(243306007, +), CAediting_150300(243306011, +), CAediting_150301(243306035, +), CAediting_150302(243306036, +), CAediting_150303(243306038, +), CAediting_150304(243306041, +), CAediting_150305(243309548, +), CAediting_150306(243309556, +), CAediting_150307(243309566, +), CAediting_150308(243309574, +), CAediting_150309(243309604, +), CAediting_150310(243309635, +), CAediting_150311(243309712, +), CAediting_150312(243309742, +), CAediting_150313(243309757, +), CAediting_150314(243309964, +), CAediting_150315(243309993, +), CAediting_150316(243310044, +), CAediting_150317(243310048, +), CAediting_150318(243310139, +), CAediting_150319(243311629, +), CAediting_150320(243311632, +), CAediting_150321(243311633, +), CAediting_150322(243311637, +), CAediting_150323(243311643, +), CAediting_150324(243311660, +), CAediting_150325(243311668, +), CAediting_150326(243311682, +), CAediting_150327(243311686, +), CAediting_150328(243311689, +), CAediting_150329(243311716, +), CAediting_150330(243311733, +), CAediting_150331(243312445, +), CAediting_150332(243312452, +), CAediting_150333(243312478, +), CAediting_150334(243312497, +), CAediting_150335(243312529, +), CAediting_150336(243312530, +), CAediting_150337(243312531, +), CAediting_150338(243312536, +), CAediting_150339(243312559, +), CAediting_150340(243312577, +), CAediting_150341(243312585, +), CAediting_150342(243312586, +), CAediting_150343(243312591, +), CAediting_150344(243312595, +), CAediting_150345(243312608, +), CAediting_150346(243312612, +), CAediting_150347(243312618, +), CAediting_150348(243312647, +), CAediting_150349(243314749, +), CAediting_150350(243314758, +), CAediting_150351(243314771, +), CAediting_150352(243314779, +), CAediting_150353(243314784, +), CAediting_150354(243314790, +), CAediting_150355(243314810, +), CAediting_150356(243314827, +), CAediting_150357(243314836, +), CAediting_150358(243314839, +), CAediting_150359(243314849, +), CAediting_150360(243314893, +), CAediting_150361(243314895, +), CAediting_150362(243314899, +), CAediting_150363(243314957, +), CAediting_150364(243318106, +), CAediting_150365(243318131, +), CAediting_150366(243318132, +), CAediting_150367(243318133, +), CAediting_150368(243318136, +), CAediting_150369(243318137, +), CAediting_150370(243318138, +), CAediting_150371(243318145, +), CAediting_150372(243318156, +), CAediting_150373(243318161, +), CAediting_150374(243318166, +), CAediting_150375(243318176, +), CAediting_150376(243318205, +), CAediting_150377(243318208, +), CAediting_150378(243318236, +), CAediting_150379(243318240, +), CAediting_150380(243318245, +), CAediting_150381(243318252, +), CAediting_150382(243318253, +), CAediting_150383(243318255, +), CAediting_150384(243318258, +), CAediting_150385(243318259, +), CAediting_150386(243318263, +), CAediting_150387(243318274, +), CAediting_150388(243318321, +), CAediting_150389(243321476, +), CAediting_150390(243321528, +), CAediting_150391(243348718, +), CAediting_150392(243348865, +), CAediting_150393(243348866, +), CAediting_150394(243353235, +), CAediting_150395(243353236, +), CAediting_150396(243353249, +), CAediting_150397(243353305, +), CAediting_150398(243353314, +), CAediting_150399(243353326, +), CAediting_150400(243353370, +), CAediting_150401(243353371, +), CAediting_150402(243353397, +), CAediting_150403(243353402, +), CAediting_150404(243353416, +), CAediting_150405(243356794, +), CAediting_150406(243356877, +), CAediting_150407(243359986, +), CAediting_150408(243360002, +), CAediting_150409(243360743, +), CAediting_150410(243385310, +), CAediting_150411(243385315, +), CAediting_150412(243385809, +), CAediting_150413(243385810, +), CAediting_150414(243385848, +), CAediting_150415(243387793, +), CAediting_150416(243387896, +), CAediting_150417(243387899, +), CAediting_150418(243388590, +), CAediting_150419(243388627, +), CAediting_150420(243388628, +), CAediting_150421(243388679, +), CAediting_150422(243402186, +), CAediting_150423(243402244, +), CAediting_150424(243402276, +), CAediting_150425(243402279, +), CAediting_150426(243402283, +), CAediting_150427(243412290, +), CAediting_150428(243412313, +), CAediting_150429(243412357, +), CAediting_150430(243412363, +), CAediting_150431(243412520, +), CAediting_150432(243429572, +), CAediting_150433(243429923, +), CAediting_150434(243429925, +), CAediting_150435(243430509, +), CAediting_150436(243430538, +), CAediting_150437(243439185, +), CAediting_150438(243439254, +), CAediting_150439(243446281, +), CAediting_150440(243446315, +), CAediting_150441(243446328, +), CAediting_150442(243446331, +), CAediting_150443(243446334, +), CAediting_150444(243446384, +), CAediting_150445(243446406, +), CAediting_150446(243446408, +), CAediting_150447(243446422, +), CAediting_150448(243446432, +), CAediting_150449(243446456, +), CAediting_150450(243446463, +), CAediting_150451(243446488, +), CAediting_150452(243446500, +), CAediting_150453(243446501, +), CAediting_150454(243446553, +), CAediting_150455(243446978, +), CAediting_150456(243446997, +), CAediting_150457(243447027, +), CAediting_150458(243447029, +), CAediting_150459(243447032, +), CAediting_150460(243447037, +), CAediting_150461(243447050, +), CAediting_150462(243447051, +), CAediting_150463(243447056, +), CAediting_150464(243447066, +), CAediting_150465(243447091, +), CAediting_150466(243447092, +), CAediting_150467(243447099, +), CAediting_150468(243447100, +), CAediting_150469(243447101, +), CAediting_150470(243447102, +), CAediting_150471(243447105, +), CAediting_150472(243447109, +), CAediting_150473(243447115, +), CAediting_150474(243447130, +), CAediting_150475(243447131, +), CAediting_150476(243447145, +), CAediting_150477(243447169, +), CAediting_150478(243447181, +), CAediting_150479(243447199, +), CAediting_150480(243447201, +), CAediting_150481(243451654, +), CAediting_150482(243451717, +), CAediting_150483(243451733, +), CAediting_150484(243451742, +), CAediting_150485(243451786, +), CAediting_150486(243451809, +), CAediting_150487(243451814, +), CAediting_150488(243451822, +), CAediting_150489(243451824, +), CAediting_150490(243451879, +), CAediting_150491(243451884, +), CAediting_150492(243452613, +), CAediting_150493(243452655, +), CAediting_150494(243468568, +), CAediting_150495(243478748, +), CAediting_150496(243478843, +), CAediting_150497(243478873, +), CAediting_150498(243478879, +), CAediting_150499(243485739, +),

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RNA editing positional annotations for SDCCAG8 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_150160	chr1_243258456_+	ncRNA_intronic
CAediting_150161	chr1_243258505_+	ncRNA_intronic
CAediting_150162	chr1_243258516_+	ncRNA_intronic
CAediting_150163	chr1_243258530_+	ncRNA_intronic
CAediting_150164	chr1_243258534_+	ncRNA_intronic
CAediting_150165	chr1_243258544_+	ncRNA_intronic
CAediting_150166	chr1_243258550_+	ncRNA_intronic
CAediting_150167	chr1_243258640_+	ncRNA_intronic
CAediting_150168	chr1_243258667_+	ncRNA_intronic
CAediting_150169	chr1_243262236_+	ncRNA_intronic
CAediting_150170	chr1_243262246_+	ncRNA_intronic
CAediting_150171	chr1_243262248_+	ncRNA_intronic
CAediting_150172	chr1_243264503_+	ncRNA_intronic
CAediting_150173	chr1_243264507_+	ncRNA_intronic
CAediting_150174	chr1_243265627_+	ncRNA_intronic
CAediting_150175	chr1_243265692_+	ncRNA_intronic
CAediting_150176	chr1_243265693_+	ncRNA_intronic
CAediting_150177	chr1_243265698_+	ncRNA_intronic
CAediting_150178	chr1_243265741_+	ncRNA_intronic
CAediting_150179	chr1_243265762_+	ncRNA_intronic
CAediting_150180	chr1_243265763_+	ncRNA_intronic
CAediting_150181	chr1_243266338_+	ncRNA_intronic
CAediting_150182	chr1_243266348_+	ncRNA_intronic
CAediting_150183	chr1_243266356_+	ncRNA_intronic
CAediting_150184	chr1_243266367_+	ncRNA_intronic
CAediting_150185	chr1_243266368_+	ncRNA_intronic
CAediting_150186	chr1_243266381_+	ncRNA_intronic
CAediting_150187	chr1_243266391_+	ncRNA_intronic
CAediting_150188	chr1_243266416_+	ncRNA_intronic
CAediting_150189	chr1_243266421_+	ncRNA_intronic
CAediting_150190	chr1_243266446_+	ncRNA_intronic
CAediting_150191	chr1_243266450_+	ncRNA_intronic
CAediting_150192	chr1_243266456_+	ncRNA_intronic
CAediting_150193	chr1_243266462_+	ncRNA_intronic
CAediting_150194	chr1_243266464_+	ncRNA_intronic
CAediting_150195	chr1_243266466_+	ncRNA_intronic
CAediting_150196	chr1_243266549_+	ncRNA_intronic
CAediting_150197	chr1_243266554_+	ncRNA_intronic
CAediting_150198	chr1_243266563_+	ncRNA_intronic
CAediting_150199	chr1_243266567_+	ncRNA_intronic
CAediting_150200	chr1_243266582_+	ncRNA_intronic
CAediting_150201	chr1_243266594_+	ncRNA_intronic
CAediting_150202	chr1_243266596_+	ncRNA_intronic
CAediting_150203	chr1_243266700_+	ncRNA_intronic
CAediting_150204	chr1_243266701_+	ncRNA_intronic
CAediting_150205	chr1_243266706_+	ncRNA_intronic
CAediting_150206	chr1_243266822_+	ncRNA_intronic
CAediting_150207	chr1_243266823_+	ncRNA_intronic
CAediting_150208	chr1_243266828_+	ncRNA_intronic
CAediting_150209	chr1_243266832_+	ncRNA_intronic
CAediting_150210	chr1_243266836_+	ncRNA_intronic
CAediting_150211	chr1_243266845_+	ncRNA_intronic
CAediting_150212	chr1_243266858_+	ncRNA_intronic
CAediting_150213	chr1_243266875_+	ncRNA_intronic
CAediting_150214	chr1_243266887_+	ncRNA_intronic
CAediting_150215	chr1_243266989_+	ncRNA_intronic
CAediting_150216	chr1_243266990_+	ncRNA_intronic
CAediting_150217	chr1_243267006_+	ncRNA_intronic
CAediting_150218	chr1_243267016_+	ncRNA_intronic
CAediting_150219	chr1_243267028_+	ncRNA_intronic
CAediting_150220	chr1_243267029_+	ncRNA_intronic
CAediting_150221	chr1_243267033_+	ncRNA_intronic
CAediting_150222	chr1_243267042_+	ncRNA_intronic
CAediting_150223	chr1_243267059_+	ncRNA_intronic
CAediting_150224	chr1_243267067_+	ncRNA_intronic
CAediting_150225	chr1_243267083_+	ncRNA_intronic
CAediting_150226	chr1_243267084_+	ncRNA_intronic
CAediting_150227	chr1_243267090_+	ncRNA_intronic
CAediting_150228	chr1_243267092_+	ncRNA_intronic
CAediting_150229	chr1_243267093_+	ncRNA_intronic
CAediting_150230	chr1_243267096_+	ncRNA_intronic
CAediting_150231	chr1_243267116_+	ncRNA_intronic
CAediting_150232	chr1_243267122_+	ncRNA_intronic
CAediting_150233	chr1_243267128_+	ncRNA_intronic
CAediting_150234	chr1_243267149_+	ncRNA_intronic
CAediting_150235	chr1_243267155_+	ncRNA_intronic
CAediting_150236	chr1_243267163_+	ncRNA_intronic
CAediting_150237	chr1_243267164_+	ncRNA_intronic
CAediting_150238	chr1_243267177_+	ncRNA_intronic
CAediting_150239	chr1_243267188_+	ncRNA_intronic
CAediting_150240	chr1_243267192_+	ncRNA_intronic
CAediting_150241	chr1_243267193_+	ncRNA_intronic
CAediting_150242	chr1_243288226_+	ncRNA_intronic
CAediting_150243	chr1_243288301_+	ncRNA_intronic
CAediting_150244	chr1_243296135_+	ncRNA_intronic
CAediting_150245	chr1_243302198_+	ncRNA_intronic
CAediting_150246	chr1_243305051_+	exonic
CAediting_150247	chr1_243305084_+	exonic
CAediting_150248	chr1_243305087_+	exonic
CAediting_150249	chr1_243305096_+	exonic
CAediting_150250	chr1_243305129_+	exonic
CAediting_150251	chr1_243305140_+	exonic
CAediting_150252	chr1_243305149_+	ncRNA_exonic
CAediting_150253	chr1_243305158_+	ncRNA_exonic
CAediting_150254	chr1_243305171_+	ncRNA_exonic
CAediting_150255	chr1_243305174_+	ncRNA_exonic
CAediting_150256	chr1_243305184_+	ncRNA_exonic
CAediting_150257	chr1_243305211_+	ncRNA_exonic
CAediting_150258	chr1_243305216_+	ncRNA_exonic
CAediting_150259	chr1_243305217_+	ncRNA_exonic
CAediting_150260	chr1_243305220_+	ncRNA_exonic
CAediting_150261	chr1_243305249_+	ncRNA_exonic
CAediting_150262	chr1_243305250_+	ncRNA_exonic
CAediting_150263	chr1_243305260_+	ncRNA_exonic
CAediting_150264	chr1_243305327_+	ncRNA_exonic
CAediting_150265	chr1_243305825_+	UTR3
CAediting_150266	chr1_243305833_+	UTR3
CAediting_150267	chr1_243305834_+	UTR3
CAediting_150268	chr1_243305839_+	UTR3
CAediting_150269	chr1_243305840_+	UTR3
CAediting_150270	chr1_243305842_+	UTR3
CAediting_150271	chr1_243305851_+	UTR3
CAediting_150272	chr1_243305855_+	UTR3
CAediting_150273	chr1_243305874_+	UTR3
CAediting_150274	chr1_243305879_+	UTR3
CAediting_150275	chr1_243305880_+	UTR3
CAediting_150276	chr1_243305888_+	UTR3
CAediting_150277	chr1_243305890_+	UTR3
CAediting_150278	chr1_243305893_+	UTR3
CAediting_150279	chr1_243305902_+	UTR3
CAediting_150280	chr1_243305903_+	UTR3
CAediting_150281	chr1_243305910_+	UTR3
CAediting_150282	chr1_243305911_+	UTR3
CAediting_150283	chr1_243305913_+	UTR3
CAediting_150284	chr1_243305924_+	UTR3
CAediting_150285	chr1_243305928_+	UTR3
CAediting_150286	chr1_243305929_+	UTR3
CAediting_150287	chr1_243305930_+	UTR3
CAediting_150288	chr1_243305936_+	UTR3
CAediting_150289	chr1_243305938_+	UTR3
CAediting_150290	chr1_243305939_+	UTR3
CAediting_150291	chr1_243305958_+	UTR3
CAediting_150292	chr1_243305960_+	UTR3
CAediting_150293	chr1_243305962_+	UTR3
CAediting_150294	chr1_243305968_+	UTR3
CAediting_150295	chr1_243305978_+	UTR3
CAediting_150296	chr1_243305982_+	UTR3
CAediting_150297	chr1_243306001_+	UTR3
CAediting_150298	chr1_243306006_+	UTR3
CAediting_150299	chr1_243306007_+	UTR3
CAediting_150300	chr1_243306011_+	UTR3
CAediting_150301	chr1_243306035_+	UTR3
CAediting_150302	chr1_243306036_+	UTR3
CAediting_150303	chr1_243306038_+	UTR3
CAediting_150304	chr1_243306041_+	UTR3
CAediting_150305	chr1_243309548_+	ncRNA_intronic
CAediting_150306	chr1_243309556_+	ncRNA_intronic
CAediting_150307	chr1_243309566_+	ncRNA_intronic
CAediting_150308	chr1_243309574_+	ncRNA_intronic
CAediting_150309	chr1_243309604_+	ncRNA_intronic
CAediting_150310	chr1_243309635_+	ncRNA_intronic
CAediting_150311	chr1_243309712_+	ncRNA_intronic
CAediting_150312	chr1_243309742_+	ncRNA_intronic
CAediting_150313	chr1_243309757_+	ncRNA_intronic
CAediting_150314	chr1_243309964_+	ncRNA_intronic
CAediting_150315	chr1_243309993_+	ncRNA_intronic
CAediting_150316	chr1_243310044_+	ncRNA_intronic
CAediting_150317	chr1_243310048_+	ncRNA_intronic
CAediting_150318	chr1_243310139_+	ncRNA_intronic
CAediting_150319	chr1_243311629_+	ncRNA_intronic
CAediting_150320	chr1_243311632_+	ncRNA_intronic
CAediting_150321	chr1_243311633_+	ncRNA_intronic
CAediting_150322	chr1_243311637_+	ncRNA_intronic
CAediting_150323	chr1_243311643_+	ncRNA_intronic
CAediting_150324	chr1_243311660_+	ncRNA_intronic
CAediting_150325	chr1_243311668_+	ncRNA_intronic
CAediting_150326	chr1_243311682_+	ncRNA_intronic
CAediting_150327	chr1_243311686_+	ncRNA_intronic
CAediting_150328	chr1_243311689_+	ncRNA_intronic
CAediting_150329	chr1_243311716_+	ncRNA_intronic
CAediting_150330	chr1_243311733_+	ncRNA_intronic
CAediting_150331	chr1_243312445_+	ncRNA_intronic
CAediting_150332	chr1_243312452_+	ncRNA_intronic
CAediting_150333	chr1_243312478_+	ncRNA_intronic
CAediting_150334	chr1_243312497_+	ncRNA_intronic
CAediting_150335	chr1_243312529_+	ncRNA_intronic
CAediting_150336	chr1_243312530_+	ncRNA_intronic
CAediting_150337	chr1_243312531_+	ncRNA_intronic
CAediting_150338	chr1_243312536_+	ncRNA_intronic
CAediting_150339	chr1_243312559_+	ncRNA_intronic
CAediting_150340	chr1_243312577_+	ncRNA_intronic
CAediting_150341	chr1_243312585_+	ncRNA_intronic
CAediting_150342	chr1_243312586_+	ncRNA_intronic
CAediting_150343	chr1_243312591_+	ncRNA_intronic
CAediting_150344	chr1_243312595_+	ncRNA_intronic
CAediting_150345	chr1_243312608_+	ncRNA_intronic
CAediting_150346	chr1_243312612_+	ncRNA_intronic
CAediting_150347	chr1_243312618_+	ncRNA_intronic
CAediting_150348	chr1_243312647_+	ncRNA_intronic
CAediting_150349	chr1_243314749_+	ncRNA_intronic
CAediting_150350	chr1_243314758_+	ncRNA_intronic
CAediting_150351	chr1_243314771_+	ncRNA_intronic
CAediting_150352	chr1_243314779_+	ncRNA_intronic
CAediting_150353	chr1_243314784_+	ncRNA_intronic
CAediting_150354	chr1_243314790_+	ncRNA_intronic
CAediting_150355	chr1_243314810_+	ncRNA_intronic
CAediting_150356	chr1_243314827_+	ncRNA_intronic
CAediting_150357	chr1_243314836_+	ncRNA_intronic
CAediting_150358	chr1_243314839_+	ncRNA_intronic
CAediting_150359	chr1_243314849_+	ncRNA_intronic
CAediting_150360	chr1_243314893_+	ncRNA_intronic
CAediting_150361	chr1_243314895_+	ncRNA_intronic
CAediting_150362	chr1_243314899_+	ncRNA_intronic
CAediting_150363	chr1_243314957_+	ncRNA_intronic
CAediting_150364	chr1_243318106_+	intronic
CAediting_150365	chr1_243318131_+	intronic
CAediting_150366	chr1_243318132_+	intronic
CAediting_150367	chr1_243318133_+	intronic
CAediting_150368	chr1_243318136_+	intronic
CAediting_150369	chr1_243318137_+	intronic
CAediting_150370	chr1_243318138_+	intronic
CAediting_150371	chr1_243318145_+	intronic
CAediting_150372	chr1_243318156_+	intronic
CAediting_150373	chr1_243318161_+	intronic
CAediting_150374	chr1_243318166_+	intronic
CAediting_150375	chr1_243318176_+	intronic
CAediting_150376	chr1_243318205_+	intronic
CAediting_150377	chr1_243318208_+	intronic
CAediting_150378	chr1_243318236_+	intronic
CAediting_150379	chr1_243318240_+	intronic
CAediting_150380	chr1_243318245_+	intronic
CAediting_150381	chr1_243318252_+	intronic
CAediting_150382	chr1_243318253_+	intronic
CAediting_150383	chr1_243318255_+	intronic
CAediting_150384	chr1_243318258_+	intronic
CAediting_150385	chr1_243318259_+	intronic
CAediting_150386	chr1_243318263_+	intronic
CAediting_150387	chr1_243318274_+	intronic
CAediting_150388	chr1_243318321_+	intronic
CAediting_150389	chr1_243321476_+	intronic
CAediting_150390	chr1_243321528_+	intronic
CAediting_150391	chr1_243348718_+	ncRNA_intronic
CAediting_150392	chr1_243348865_+	ncRNA_intronic
CAediting_150393	chr1_243348866_+	ncRNA_intronic
CAediting_150394	chr1_243353235_+	ncRNA_intronic
CAediting_150395	chr1_243353236_+	ncRNA_intronic
CAediting_150396	chr1_243353249_+	ncRNA_intronic
CAediting_150397	chr1_243353305_+	ncRNA_intronic
CAediting_150398	chr1_243353314_+	ncRNA_intronic
CAediting_150399	chr1_243353326_+	ncRNA_intronic
CAediting_150400	chr1_243353370_+	ncRNA_intronic
CAediting_150401	chr1_243353371_+	ncRNA_intronic
CAediting_150402	chr1_243353397_+	ncRNA_intronic
CAediting_150403	chr1_243353402_+	ncRNA_intronic
CAediting_150404	chr1_243353416_+	ncRNA_intronic
CAediting_150405	chr1_243356794_+	ncRNA_intronic
CAediting_150406	chr1_243356877_+	ncRNA_intronic
CAediting_150407	chr1_243359986_+	ncRNA_intronic
CAediting_150408	chr1_243360002_+	ncRNA_intronic
CAediting_150409	chr1_243360743_+	ncRNA_intronic
CAediting_150410	chr1_243385310_+	ncRNA_intronic
CAediting_150411	chr1_243385315_+	ncRNA_intronic
CAediting_150412	chr1_243385809_+	ncRNA_intronic
CAediting_150413	chr1_243385810_+	ncRNA_intronic
CAediting_150414	chr1_243385848_+	ncRNA_intronic
CAediting_150415	chr1_243387793_+	ncRNA_intronic
CAediting_150416	chr1_243387896_+	ncRNA_intronic
CAediting_150417	chr1_243387899_+	ncRNA_intronic
CAediting_150418	chr1_243388590_+	ncRNA_intronic
CAediting_150419	chr1_243388627_+	ncRNA_intronic
CAediting_150420	chr1_243388628_+	ncRNA_intronic
CAediting_150421	chr1_243388679_+	ncRNA_intronic
CAediting_150422	chr1_243402186_+	ncRNA_intronic
CAediting_150423	chr1_243402244_+	ncRNA_intronic
CAediting_150424	chr1_243402276_+	ncRNA_intronic
CAediting_150425	chr1_243402279_+	ncRNA_intronic
CAediting_150426	chr1_243402283_+	ncRNA_intronic
CAediting_150427	chr1_243412290_+	ncRNA_intronic
CAediting_150428	chr1_243412313_+	ncRNA_intronic
CAediting_150429	chr1_243412357_+	ncRNA_intronic
CAediting_150430	chr1_243412363_+	ncRNA_intronic
CAediting_150431	chr1_243412520_+	ncRNA_intronic
CAediting_150432	chr1_243429572_+	ncRNA_intronic
CAediting_150433	chr1_243429923_+	ncRNA_intronic
CAediting_150434	chr1_243429925_+	ncRNA_intronic
CAediting_150435	chr1_243430509_+	ncRNA_intronic
CAediting_150436	chr1_243430538_+	ncRNA_intronic
CAediting_150437	chr1_243439185_+	ncRNA_intronic
CAediting_150438	chr1_243439254_+	ncRNA_intronic
CAediting_150439	chr1_243446281_+	ncRNA_intronic
CAediting_150440	chr1_243446315_+	ncRNA_intronic
CAediting_150441	chr1_243446328_+	ncRNA_intronic
CAediting_150442	chr1_243446331_+	ncRNA_intronic
CAediting_150443	chr1_243446334_+	ncRNA_intronic
CAediting_150444	chr1_243446384_+	ncRNA_intronic
CAediting_150445	chr1_243446406_+	ncRNA_intronic
CAediting_150446	chr1_243446408_+	ncRNA_intronic
CAediting_150447	chr1_243446422_+	ncRNA_intronic
CAediting_150448	chr1_243446432_+	ncRNA_intronic
CAediting_150449	chr1_243446456_+	ncRNA_intronic
CAediting_150450	chr1_243446463_+	ncRNA_intronic
CAediting_150451	chr1_243446488_+	ncRNA_intronic
CAediting_150452	chr1_243446500_+	ncRNA_intronic
CAediting_150453	chr1_243446501_+	ncRNA_intronic
CAediting_150454	chr1_243446553_+	ncRNA_intronic
CAediting_150455	chr1_243446978_+	ncRNA_intronic
CAediting_150456	chr1_243446997_+	ncRNA_intronic
CAediting_150457	chr1_243447027_+	ncRNA_intronic
CAediting_150458	chr1_243447029_+	ncRNA_intronic
CAediting_150459	chr1_243447032_+	ncRNA_intronic
CAediting_150460	chr1_243447037_+	ncRNA_intronic
CAediting_150461	chr1_243447050_+	ncRNA_intronic
CAediting_150462	chr1_243447051_+	ncRNA_intronic
CAediting_150463	chr1_243447056_+	ncRNA_intronic
CAediting_150464	chr1_243447066_+	ncRNA_intronic
CAediting_150465	chr1_243447091_+	ncRNA_intronic
CAediting_150466	chr1_243447092_+	ncRNA_intronic
CAediting_150467	chr1_243447099_+	ncRNA_intronic
CAediting_150468	chr1_243447100_+	ncRNA_intronic
CAediting_150469	chr1_243447101_+	ncRNA_intronic
CAediting_150470	chr1_243447102_+	ncRNA_intronic
CAediting_150471	chr1_243447105_+	ncRNA_intronic
CAediting_150472	chr1_243447109_+	ncRNA_intronic
CAediting_150473	chr1_243447115_+	ncRNA_intronic
CAediting_150474	chr1_243447130_+	ncRNA_intronic
CAediting_150475	chr1_243447131_+	ncRNA_intronic
CAediting_150476	chr1_243447145_+	ncRNA_intronic
CAediting_150477	chr1_243447169_+	ncRNA_intronic
CAediting_150478	chr1_243447181_+	ncRNA_intronic
CAediting_150479	chr1_243447199_+	ncRNA_intronic
CAediting_150480	chr1_243447201_+	ncRNA_intronic
CAediting_150481	chr1_243451654_+	ncRNA_intronic
CAediting_150482	chr1_243451717_+	ncRNA_intronic
CAediting_150483	chr1_243451733_+	ncRNA_intronic
CAediting_150484	chr1_243451742_+	ncRNA_intronic
CAediting_150485	chr1_243451786_+	ncRNA_intronic
CAediting_150486	chr1_243451809_+	ncRNA_intronic
CAediting_150487	chr1_243451814_+	ncRNA_intronic
CAediting_150488	chr1_243451822_+	ncRNA_intronic
CAediting_150489	chr1_243451824_+	ncRNA_intronic
CAediting_150490	chr1_243451879_+	ncRNA_intronic
CAediting_150491	chr1_243451884_+	ncRNA_intronic
CAediting_150492	chr1_243452613_+	ncRNA_intronic
CAediting_150493	chr1_243452655_+	ncRNA_intronic
CAediting_150494	chr1_243468568_+	ncRNA_intronic
CAediting_150495	chr1_243478748_+	intronic
CAediting_150496	chr1_243478843_+	intronic
CAediting_150497	chr1_243478873_+	intronic
CAediting_150498	chr1_243478879_+	intronic
CAediting_150499	chr1_243485739_+	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_150160	chr1_243258456_+	SINE	Alu	AluSz
CAediting_150161	chr1_243258505_+	SINE	Alu	AluSz
CAediting_150162	chr1_243258516_+	SINE	Alu	AluSz
CAediting_150163	chr1_243258530_+	SINE	Alu	AluSz
CAediting_150164	chr1_243258534_+	SINE	Alu	AluSz
CAediting_150165	chr1_243258544_+	SINE	Alu	AluSz
CAediting_150166	chr1_243258550_+	SINE	Alu	AluSz
CAediting_150167	chr1_243258640_+	SINE	Alu	AluSz
CAediting_150168	chr1_243258667_+	SINE	Alu	AluSz
CAediting_150169	chr1_243262236_+	SINE	Alu	AluSz
CAediting_150170	chr1_243262246_+	SINE	Alu	AluSz
CAediting_150171	chr1_243262248_+	SINE	Alu	AluSz
CAediting_150172	chr1_243264503_+	SINE	Alu	AluSp
CAediting_150173	chr1_243264507_+	SINE	Alu	AluSp
CAediting_150174	chr1_243265627_+	SINE	Alu	AluSx
CAediting_150175	chr1_243265692_+	SINE	Alu	AluSx
CAediting_150176	chr1_243265693_+	SINE	Alu	AluSx
CAediting_150177	chr1_243265698_+	SINE	Alu	AluSx
CAediting_150178	chr1_243265741_+	SINE	Alu	AluSx
CAediting_150179	chr1_243265762_+	SINE	Alu	AluSx
CAediting_150180	chr1_243265763_+	SINE	Alu	AluSx
CAediting_150181	chr1_243266338_+	SINE	Alu	AluSx
CAediting_150182	chr1_243266348_+	SINE	Alu	AluSx
CAediting_150183	chr1_243266356_+	SINE	Alu	AluSx
CAediting_150184	chr1_243266367_+	SINE	Alu	AluSx
CAediting_150185	chr1_243266368_+	SINE	Alu	AluSx
CAediting_150186	chr1_243266381_+	SINE	Alu	AluSx
CAediting_150187	chr1_243266391_+	SINE	Alu	AluSx
CAediting_150188	chr1_243266416_+	SINE	Alu	AluSx
CAediting_150189	chr1_243266421_+	SINE	Alu	AluSx
CAediting_150190	chr1_243266446_+	SINE	Alu	AluSx
CAediting_150191	chr1_243266450_+	SINE	Alu	AluSx
CAediting_150192	chr1_243266456_+	SINE	Alu	AluSx
CAediting_150193	chr1_243266462_+	SINE	Alu	AluSx
CAediting_150194	chr1_243266464_+	SINE	Alu	AluSx
CAediting_150195	chr1_243266466_+	SINE	Alu	AluSx
CAediting_150196	chr1_243266549_+	SINE	Alu	AluSx
CAediting_150197	chr1_243266554_+	SINE	Alu	AluSx
CAediting_150198	chr1_243266563_+	SINE	Alu	AluSx
CAediting_150199	chr1_243266567_+	SINE	Alu	AluSx
CAediting_150200	chr1_243266582_+	SINE	Alu	AluSx
CAediting_150201	chr1_243266594_+	SINE	Alu	AluSx
CAediting_150202	chr1_243266596_+	SINE	Alu	AluSx
CAediting_150203	chr1_243266700_+	SINE	Alu	AluSp
CAediting_150204	chr1_243266701_+	SINE	Alu	AluSp
CAediting_150205	chr1_243266706_+	SINE	Alu	AluSp
CAediting_150206	chr1_243266822_+	SINE	Alu	AluSp
CAediting_150207	chr1_243266823_+	SINE	Alu	AluSp
CAediting_150208	chr1_243266828_+	SINE	Alu	AluSp
CAediting_150209	chr1_243266832_+	SINE	Alu	AluSp
CAediting_150210	chr1_243266836_+	SINE	Alu	AluSp
CAediting_150211	chr1_243266845_+	SINE	Alu	AluSp
CAediting_150212	chr1_243266858_+	SINE	Alu	AluSp
CAediting_150213	chr1_243266875_+	SINE	Alu	AluSp
CAediting_150214	chr1_243266887_+	SINE	Alu	AluSp
CAediting_150215	chr1_243266989_+	SINE	Alu	AluY
CAediting_150216	chr1_243266990_+	SINE	Alu	AluY
CAediting_150217	chr1_243267006_+	SINE	Alu	AluY
CAediting_150218	chr1_243267016_+	SINE	Alu	AluY
CAediting_150219	chr1_243267028_+	SINE	Alu	AluY
CAediting_150220	chr1_243267029_+	SINE	Alu	AluY
CAediting_150221	chr1_243267033_+	SINE	Alu	AluY
CAediting_150222	chr1_243267042_+	SINE	Alu	AluY
CAediting_150223	chr1_243267059_+	SINE	Alu	AluY
CAediting_150224	chr1_243267067_+	SINE	Alu	AluY
CAediting_150225	chr1_243267083_+	SINE	Alu	AluY
CAediting_150226	chr1_243267084_+	SINE	Alu	AluY
CAediting_150227	chr1_243267090_+	SINE	Alu	AluY
CAediting_150228	chr1_243267092_+	SINE	Alu	AluY
CAediting_150229	chr1_243267093_+	SINE	Alu	AluY
CAediting_150230	chr1_243267096_+	SINE	Alu	AluY
CAediting_150231	chr1_243267116_+	SINE	Alu	AluY
CAediting_150232	chr1_243267122_+	SINE	Alu	AluY
CAediting_150233	chr1_243267128_+	SINE	Alu	AluY
CAediting_150234	chr1_243267149_+	SINE	Alu	AluY
CAediting_150235	chr1_243267155_+	SINE	Alu	AluY
CAediting_150236	chr1_243267163_+	SINE	Alu	AluY
CAediting_150237	chr1_243267164_+	SINE	Alu	AluY
CAediting_150238	chr1_243267177_+	SINE	Alu	AluY
CAediting_150239	chr1_243267188_+	SINE	Alu	AluY
CAediting_150240	chr1_243267192_+	SINE	Alu	AluY
CAediting_150241	chr1_243267193_+	SINE	Alu	AluY
CAediting_150242	chr1_243288226_+	SINE	Alu	AluJb
CAediting_150243	chr1_243288301_+	SINE	Alu	AluJb
CAediting_150244	chr1_243296135_+	SINE	Alu	AluSz
CAediting_150245	chr1_243302198_+	SINE	Alu	AluSx
CAediting_150246	chr1_243305051_+	SINE	Alu	AluSc
CAediting_150247	chr1_243305084_+	SINE	Alu	AluSc
CAediting_150248	chr1_243305087_+	SINE	Alu	AluSc
CAediting_150249	chr1_243305096_+	SINE	Alu	AluSc
CAediting_150250	chr1_243305129_+	SINE	Alu	AluSc
CAediting_150251	chr1_243305140_+	SINE	Alu	AluSc
CAediting_150252	chr1_243305149_+	SINE	Alu	AluSc
CAediting_150253	chr1_243305158_+	SINE	Alu	AluSc
CAediting_150254	chr1_243305171_+	SINE	Alu	AluSc
CAediting_150255	chr1_243305174_+	SINE	Alu	AluSc
CAediting_150256	chr1_243305184_+	SINE	Alu	AluSc
CAediting_150257	chr1_243305211_+	SINE	Alu	AluSc
CAediting_150258	chr1_243305216_+	SINE	Alu	AluSc
CAediting_150259	chr1_243305217_+	SINE	Alu	AluSc
CAediting_150260	chr1_243305220_+	SINE	Alu	AluSc
CAediting_150261	chr1_243305249_+	SINE	Alu	AluSc
CAediting_150262	chr1_243305250_+	SINE	Alu	AluSc
CAediting_150263	chr1_243305260_+	SINE	Alu	AluSc
CAediting_150264	chr1_243305327_+	SINE	Alu	AluSc
CAediting_150265	chr1_243305825_+	SINE	Alu	AluSz
CAediting_150266	chr1_243305833_+	SINE	Alu	AluSz
CAediting_150267	chr1_243305834_+	SINE	Alu	AluSz
CAediting_150268	chr1_243305839_+	SINE	Alu	AluSz
CAediting_150269	chr1_243305840_+	SINE	Alu	AluSz
CAediting_150270	chr1_243305842_+	SINE	Alu	AluSz
CAediting_150271	chr1_243305851_+	SINE	Alu	AluSz
CAediting_150272	chr1_243305855_+	SINE	Alu	AluSz
CAediting_150273	chr1_243305874_+	SINE	Alu	AluSz
CAediting_150274	chr1_243305879_+	SINE	Alu	AluSz
CAediting_150275	chr1_243305880_+	SINE	Alu	AluSz
CAediting_150276	chr1_243305888_+	SINE	Alu	AluSz
CAediting_150277	chr1_243305890_+	SINE	Alu	AluSz
CAediting_150278	chr1_243305893_+	SINE	Alu	AluSz
CAediting_150279	chr1_243305902_+	SINE	Alu	AluSz
CAediting_150280	chr1_243305903_+	SINE	Alu	AluSz
CAediting_150281	chr1_243305910_+	SINE	Alu	AluSz
CAediting_150282	chr1_243305911_+	SINE	Alu	AluSz
CAediting_150283	chr1_243305913_+	SINE	Alu	AluSz
CAediting_150284	chr1_243305924_+	SINE	Alu	AluSz
CAediting_150285	chr1_243305928_+	SINE	Alu	AluSz
CAediting_150286	chr1_243305929_+	SINE	Alu	AluSz
CAediting_150287	chr1_243305930_+	SINE	Alu	AluSz
CAediting_150288	chr1_243305936_+	SINE	Alu	AluSz
CAediting_150289	chr1_243305938_+	SINE	Alu	AluSz
CAediting_150290	chr1_243305939_+	SINE	Alu	AluSz
CAediting_150291	chr1_243305958_+	SINE	Alu	AluSz
CAediting_150292	chr1_243305960_+	SINE	Alu	AluSz
CAediting_150293	chr1_243305962_+	SINE	Alu	AluSz
CAediting_150294	chr1_243305968_+	SINE	Alu	AluSz
CAediting_150295	chr1_243305978_+	SINE	Alu	AluSz
CAediting_150296	chr1_243305982_+	SINE	Alu	AluSz
CAediting_150297	chr1_243306001_+	SINE	Alu	AluSz
CAediting_150298	chr1_243306006_+	SINE	Alu	AluSz
CAediting_150299	chr1_243306007_+	SINE	Alu	AluSz
CAediting_150300	chr1_243306011_+	SINE	Alu	AluSz
CAediting_150301	chr1_243306035_+	SINE	Alu	AluSz
CAediting_150302	chr1_243306036_+	SINE	Alu	AluSz
CAediting_150303	chr1_243306038_+	SINE	Alu	AluSz
CAediting_150304	chr1_243306041_+	SINE	Alu	AluSz
CAediting_150305	chr1_243309548_+	SINE	Alu	AluJo
CAediting_150306	chr1_243309556_+	SINE	Alu	AluJo
CAediting_150307	chr1_243309566_+	SINE	Alu	AluJo
CAediting_150308	chr1_243309574_+	SINE	Alu	AluJo
CAediting_150309	chr1_243309604_+	SINE	Alu	AluJo
CAediting_150310	chr1_243309635_+	SINE	Alu	AluJo
CAediting_150311	chr1_243309712_+	SINE	Alu	AluJo
CAediting_150312	chr1_243309742_+	SINE	Alu	AluJo
CAediting_150313	chr1_243309757_+	SINE	Alu	AluJo
CAediting_150314	chr1_243309964_+	SINE	Alu	AluSc
CAediting_150315	chr1_243309993_+	SINE	Alu	AluSc
CAediting_150316	chr1_243310044_+	SINE	Alu	AluSc
CAediting_150317	chr1_243310048_+	SINE	Alu	AluSc
CAediting_150318	chr1_243310139_+	SINE	Alu	AluSc
CAediting_150322	chr1_243311637_+	SINE	Alu	AluJr4
CAediting_150323	chr1_243311643_+	SINE	Alu	AluJr4
CAediting_150324	chr1_243311660_+	SINE	Alu	AluJr4
CAediting_150325	chr1_243311668_+	SINE	Alu	AluJr4
CAediting_150326	chr1_243311682_+	SINE	Alu	AluJr4
CAediting_150327	chr1_243311686_+	SINE	Alu	AluJr4
CAediting_150328	chr1_243311689_+	SINE	Alu	AluJr4
CAediting_150329	chr1_243311716_+	SINE	Alu	AluJr4
CAediting_150330	chr1_243311733_+	SINE	Alu	AluJr4
CAediting_150331	chr1_243312445_+	SINE	Alu	AluSz
CAediting_150332	chr1_243312452_+	SINE	Alu	AluSz
CAediting_150333	chr1_243312478_+	SINE	Alu	AluSz
CAediting_150334	chr1_243312497_+	SINE	Alu	AluSz
CAediting_150335	chr1_243312529_+	SINE	Alu	AluSz
CAediting_150336	chr1_243312530_+	SINE	Alu	AluSz
CAediting_150337	chr1_243312531_+	SINE	Alu	AluSz
CAediting_150338	chr1_243312536_+	SINE	Alu	AluSz
CAediting_150339	chr1_243312559_+	SINE	Alu	AluSz
CAediting_150340	chr1_243312577_+	SINE	Alu	AluSz
CAediting_150341	chr1_243312585_+	SINE	Alu	AluSz
CAediting_150342	chr1_243312586_+	SINE	Alu	AluSz
CAediting_150343	chr1_243312591_+	SINE	Alu	AluSz
CAediting_150344	chr1_243312595_+	SINE	Alu	AluSz
CAediting_150345	chr1_243312608_+	SINE	Alu	AluSz
CAediting_150346	chr1_243312612_+	SINE	Alu	AluSz
CAediting_150347	chr1_243312618_+	SINE	Alu	AluSz
CAediting_150348	chr1_243312647_+	SINE	Alu	AluSz
CAediting_150349	chr1_243314749_+	SINE	Alu	AluSz
CAediting_150350	chr1_243314758_+	SINE	Alu	AluSz
CAediting_150351	chr1_243314771_+	SINE	Alu	AluSz
CAediting_150352	chr1_243314779_+	SINE	Alu	AluSz
CAediting_150353	chr1_243314784_+	SINE	Alu	AluSz
CAediting_150354	chr1_243314790_+	SINE	Alu	AluSz
CAediting_150355	chr1_243314810_+	SINE	Alu	AluSz
CAediting_150356	chr1_243314827_+	SINE	Alu	AluSz
CAediting_150357	chr1_243314836_+	SINE	Alu	AluSz
CAediting_150358	chr1_243314839_+	SINE	Alu	AluSz
CAediting_150359	chr1_243314849_+	SINE	Alu	AluSz
CAediting_150360	chr1_243314893_+	SINE	Alu	AluSz
CAediting_150361	chr1_243314895_+	SINE	Alu	AluSz
CAediting_150362	chr1_243314899_+	SINE	Alu	AluSz
CAediting_150363	chr1_243314957_+	SINE	Alu	AluSz
CAediting_150364	chr1_243318106_+	LINE	L1	L1PA14
CAediting_150365	chr1_243318131_+	LINE	L1	L1PA14
CAediting_150366	chr1_243318132_+	LINE	L1	L1PA14
CAediting_150367	chr1_243318133_+	LINE	L1	L1PA14
CAediting_150368	chr1_243318136_+	LINE	L1	L1PA14
CAediting_150369	chr1_243318137_+	LINE	L1	L1PA14
CAediting_150370	chr1_243318138_+	LINE	L1	L1PA14
CAediting_150371	chr1_243318145_+	LINE	L1	L1PA14
CAediting_150372	chr1_243318156_+	LINE	L1	L1PA14
CAediting_150373	chr1_243318161_+	LINE	L1	L1PA14
CAediting_150374	chr1_243318166_+	LINE	L1	L1PA14
CAediting_150375	chr1_243318176_+	LINE	L1	L1PA14
CAediting_150376	chr1_243318205_+	LINE	L1	L1PA14
CAediting_150377	chr1_243318208_+	LINE	L1	L1PA14
CAediting_150378	chr1_243318236_+	LINE	L1	L1PA14
CAediting_150379	chr1_243318240_+	LINE	L1	L1PA14
CAediting_150380	chr1_243318245_+	LINE	L1	L1PA14
CAediting_150381	chr1_243318252_+	LINE	L1	L1PA14
CAediting_150382	chr1_243318253_+	LINE	L1	L1PA14
CAediting_150383	chr1_243318255_+	LINE	L1	L1PA14
CAediting_150384	chr1_243318258_+	LINE	L1	L1PA14
CAediting_150385	chr1_243318259_+	LINE	L1	L1PA14
CAediting_150386	chr1_243318263_+	LINE	L1	L1PA14
CAediting_150387	chr1_243318274_+	LINE	L1	L1PA14
CAediting_150388	chr1_243318321_+	LINE	L1	L1PA14
CAediting_150389	chr1_243321476_+	LINE	L1	L1PA16
CAediting_150390	chr1_243321528_+	LINE	L1	L1PA16
CAediting_150391	chr1_243348718_+	SINE	Alu	AluSp
CAediting_150392	chr1_243348865_+	SINE	Alu	AluSp
CAediting_150393	chr1_243348866_+	SINE	Alu	AluSp
CAediting_150394	chr1_243353235_+	SINE	Alu	AluSz
CAediting_150395	chr1_243353236_+	SINE	Alu	AluSz
CAediting_150396	chr1_243353249_+	SINE	Alu	AluSz
CAediting_150397	chr1_243353305_+	SINE	Alu	AluSz
CAediting_150398	chr1_243353314_+	SINE	Alu	AluSz
CAediting_150399	chr1_243353326_+	SINE	Alu	AluSz
CAediting_150400	chr1_243353370_+	SINE	Alu	AluSz
CAediting_150401	chr1_243353371_+	SINE	Alu	AluSz
CAediting_150402	chr1_243353397_+	SINE	Alu	AluSz
CAediting_150403	chr1_243353402_+	SINE	Alu	AluSz
CAediting_150404	chr1_243353416_+	SINE	Alu	AluSz
CAediting_150405	chr1_243356794_+	SINE	Alu	AluJb
CAediting_150406	chr1_243356877_+	SINE	Alu	AluJb
CAediting_150407	chr1_243359986_+	LINE	L1	L1M5
CAediting_150408	chr1_243360002_+	LINE	L1	L1M5
CAediting_150409	chr1_243360743_+	SINE	Alu	AluSg4
CAediting_150410	chr1_243385310_+	SINE	Alu	AluJb
CAediting_150411	chr1_243385315_+	SINE	Alu	AluJb
CAediting_150412	chr1_243385809_+	SINE	Alu	AluSp
CAediting_150413	chr1_243385810_+	SINE	Alu	AluSp
CAediting_150414	chr1_243385848_+	SINE	Alu	AluSp
CAediting_150415	chr1_243387793_+	SINE	Alu	AluSx
CAediting_150416	chr1_243387896_+	SINE	Alu	AluSx
CAediting_150417	chr1_243387899_+	SINE	Alu	AluSx
CAediting_150418	chr1_243388590_+	SINE	Alu	AluJr4
CAediting_150419	chr1_243388627_+	SINE	Alu	AluJr4
CAediting_150420	chr1_243388628_+	SINE	Alu	AluJr4
CAediting_150421	chr1_243388679_+	SINE	Alu	AluJr4
CAediting_150422	chr1_243402186_+	SINE	Alu	AluSz
CAediting_150423	chr1_243402244_+	SINE	Alu	AluSz
CAediting_150424	chr1_243402276_+	SINE	Alu	AluSz
CAediting_150425	chr1_243402279_+	SINE	Alu	AluSz
CAediting_150426	chr1_243402283_+	SINE	Alu	AluSz
CAediting_150427	chr1_243412290_+	DNA	hAT-Charlie	MER30
CAediting_150428	chr1_243412313_+	DNA	hAT-Charlie	MER30
CAediting_150429	chr1_243412357_+	DNA	hAT-Charlie	MER30
CAediting_150430	chr1_243412363_+	DNA	hAT-Charlie	MER30
CAediting_150431	chr1_243412520_+	DNA	hAT-Charlie	MER30
CAediting_150432	chr1_243429572_+	SINE	Alu	AluJr4
CAediting_150433	chr1_243429923_+	SINE	Alu	AluSx1
CAediting_150434	chr1_243429925_+	SINE	Alu	AluSx1
CAediting_150435	chr1_243430509_+	SINE	Alu	AluY
CAediting_150436	chr1_243430538_+	SINE	Alu	AluY
CAediting_150437	chr1_243439185_+	SINE	Alu	FRAM
CAediting_150438	chr1_243439254_+	SINE	Alu	FRAM
CAediting_150439	chr1_243446281_+	SINE	Alu	AluJo
CAediting_150440	chr1_243446315_+	SINE	Alu	AluJo
CAediting_150441	chr1_243446328_+	SINE	Alu	AluJo
CAediting_150442	chr1_243446331_+	SINE	Alu	AluJo
CAediting_150443	chr1_243446334_+	SINE	Alu	AluJo
CAediting_150444	chr1_243446384_+	SINE	Alu	AluJo
CAediting_150445	chr1_243446406_+	SINE	Alu	AluJo
CAediting_150446	chr1_243446408_+	SINE	Alu	AluJo
CAediting_150447	chr1_243446422_+	SINE	Alu	AluJo
CAediting_150448	chr1_243446432_+	SINE	Alu	AluJo
CAediting_150449	chr1_243446456_+	SINE	Alu	AluJo
CAediting_150450	chr1_243446463_+	SINE	Alu	AluJo
CAediting_150451	chr1_243446488_+	SINE	Alu	AluJo
CAediting_150452	chr1_243446500_+	SINE	Alu	AluJo
CAediting_150453	chr1_243446501_+	SINE	Alu	AluJo
CAediting_150454	chr1_243446553_+	SINE	Alu	AluJo
CAediting_150455	chr1_243446978_+	SINE	Alu	AluSx
CAediting_150456	chr1_243446997_+	SINE	Alu	AluSx
CAediting_150457	chr1_243447027_+	SINE	Alu	AluSx
CAediting_150458	chr1_243447029_+	SINE	Alu	AluSx
CAediting_150459	chr1_243447032_+	SINE	Alu	AluSx
CAediting_150460	chr1_243447037_+	SINE	Alu	AluSx
CAediting_150461	chr1_243447050_+	SINE	Alu	AluSx
CAediting_150462	chr1_243447051_+	SINE	Alu	AluSx
CAediting_150463	chr1_243447056_+	SINE	Alu	AluSx
CAediting_150464	chr1_243447066_+	SINE	Alu	AluSx
CAediting_150465	chr1_243447091_+	SINE	Alu	AluSx
CAediting_150466	chr1_243447092_+	SINE	Alu	AluSx
CAediting_150467	chr1_243447099_+	SINE	Alu	AluSx
CAediting_150468	chr1_243447100_+	SINE	Alu	AluSx
CAediting_150469	chr1_243447101_+	SINE	Alu	AluSx
CAediting_150470	chr1_243447102_+	SINE	Alu	AluSx
CAediting_150471	chr1_243447105_+	SINE	Alu	AluSx
CAediting_150472	chr1_243447109_+	SINE	Alu	AluSx
CAediting_150473	chr1_243447115_+	SINE	Alu	AluSx
CAediting_150474	chr1_243447130_+	SINE	Alu	AluSx
CAediting_150475	chr1_243447131_+	SINE	Alu	AluSx
CAediting_150476	chr1_243447145_+	SINE	Alu	AluSx
CAediting_150477	chr1_243447169_+	SINE	Alu	AluSx
CAediting_150478	chr1_243447181_+	SINE	Alu	AluSx
CAediting_150479	chr1_243447199_+	SINE	Alu	AluSx
CAediting_150480	chr1_243447201_+	SINE	Alu	AluSx
CAediting_150481	chr1_243451654_+	SINE	Alu	AluSz
CAediting_150482	chr1_243451717_+	SINE	Alu	AluSz
CAediting_150483	chr1_243451733_+	SINE	Alu	AluSz
CAediting_150484	chr1_243451742_+	SINE	Alu	AluSz
CAediting_150485	chr1_243451786_+	SINE	Alu	AluSz
CAediting_150486	chr1_243451809_+	SINE	Alu	AluSz
CAediting_150487	chr1_243451814_+	SINE	Alu	AluSz
CAediting_150488	chr1_243451822_+	SINE	Alu	AluSz
CAediting_150489	chr1_243451824_+	SINE	Alu	AluSz
CAediting_150490	chr1_243451879_+	SINE	Alu	AluSz
CAediting_150491	chr1_243451884_+	SINE	Alu	AluSz
CAediting_150492	chr1_243452613_+	SINE	Alu	AluJo
CAediting_150493	chr1_243452655_+	SINE	Alu	AluJo
CAediting_150494	chr1_243468568_+	SINE	Alu	FRAM
CAediting_150495	chr1_243478748_+	SINE	Alu	AluSc
CAediting_150496	chr1_243478843_+	SINE	Alu	AluSc
CAediting_150497	chr1_243478873_+	SINE	Alu	AluSc
CAediting_150498	chr1_243478879_+	SINE	Alu	AluSc
CAediting_150499	chr1_243485739_+	SINE	Alu	AluSg4

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RNA A-to-I editing events in the alternative splicing sites for SDCCAG8

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_150250	chr1_243305129_+	243305121:243305129	5SS	0+6i	ATGGTGAAA	0.56	ATGGTGAAG	1.69

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000054282.14.SDCCAG8.

Correlation between RNA A-to-I editing and PSI for ENSG00000054282.14.SDCCAG8.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SDCCAG8

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for SDCCAG8

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for SDCCAG8

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_150269	chr1_243305840_+	ENSG00000054282.14	ENST00000476722	hsa-miR-302a-3p	243305838	243305844	7mer-m8	243305822	243305845	144.00	-12.02
CAediting_150269	chr1_243305840_+	ENSG00000054282.14	ENST00000476722	hsa-miR-302b-3p	243305838	243305844	7mer-m8	243305818	243305845	148.00	-13.25
CAediting_150269	chr1_243305840_+	ENSG00000054282.14	ENST00000476722	hsa-miR-302c-3p	243305838	243305844	7mer-m8	243305818	243305845	148.00	-16.45
CAediting_150269	chr1_243305840_+	ENSG00000054282.14	ENST00000476722	hsa-miR-302d-3p	243305838	243305844	7mer-m8	243305818	243305845	152.00	-16.18
CAediting_150269	chr1_243305840_+	ENSG00000054282.14	ENST00000476722	hsa-miR-302e	243305838	243305844	7mer-m8	243305824	243305845	142.00	-12.59
CAediting_150269	chr1_243305840_+	ENSG00000054282.14	ENST00000476722	hsa-miR-372-3p	243305838	243305844	7mer-m8	243305822	243305845	155.00	-19.27
CAediting_150269	chr1_243305840_+	ENSG00000054282.14	ENST00000476722	hsa-miR-373-3p	243305838	243305844	7mer-m8	243305822	243305845	156.00	-17.27
CAediting_150269	chr1_243305840_+	ENSG00000054282.14	ENST00000476722	hsa-miR-4731-5p	243305835	243305841	7mer-1a	243305821	243305841	142.00	-24.50
CAediting_150269	chr1_243305840_+	ENSG00000054282.14	ENST00000476722	hsa-miR-512-3p	243305837	243305843	7mer-m8	243305822	243305844	150.00	-14.13
CAediting_150269	chr1_243305840_+	ENSG00000054282.14	ENST00000476722	hsa-miR-512-3p	243305837	243305843	7mer-m8	243305822	243305844	150.00	-14.13
CAediting_150269	chr1_243305840_+	ENSG00000054282.14	ENST00000476722	hsa-miR-520a-3p	243305838	243305844	7mer-m8	243305824	243305845	140.00	-10.69
CAediting_150269	chr1_243305840_+	ENSG00000054282.14	ENST00000476722	hsa-miR-520b-3p	243305838	243305844	7mer-m8	243305825	243305845	140.00	-12.25
CAediting_150269	chr1_243305840_+	ENSG00000054282.14	ENST00000476722	hsa-miR-520c-3p	243305838	243305844	7mer-m8	243305824	243305845	140.00	-12.25
CAediting_150269	chr1_243305840_+	ENSG00000054282.14	ENST00000476722	hsa-miR-520d-3p	243305838	243305844	7mer-m8	243305824	243305845	143.00	-12.45
CAediting_150269	chr1_243305840_+	ENSG00000054282.14	ENST00000476722	hsa-miR-520e-3p	243305838	243305844	7mer-m8	243305825	243305845	140.00	-12.25
CAediting_150269	chr1_243305840_+	ENSG00000054282.14	ENST00000476722	hsa-miR-6506-5p	243305833	243305839	7mer-m8	243305819	243305840	151.00	-14.56
CAediting_150254	chr1_243305171_+	ENSG00000054282.14	ENST00000476722	hsa-miR-1227-3p	243305168	243305174	7mer-m8	243305156	243305175	145.00	-28.98
CAediting_150254	chr1_243305171_+	ENSG00000054282.14	ENST00000476722	hsa-miR-4715-3p	243305167	243305173	7mer-m8	243305154	243305174	146.00	-22.42
CAediting_150256	chr1_243305184_+	ENSG00000054282.14	ENST00000476722	hsa-miR-140-3p	243305179	243305185	7mer-m8	243305163	243305186	149.00	-22.01
CAediting_150258	chr1_243305216_+	ENSG00000054282.14	ENST00000476722	hsa-miR-660-3p	243305209	243305216	8mer-1a	243305197	243305216	144.00	-16.11
CAediting_150261	chr1_243305249_+	ENSG00000054282.14	ENST00000476722	hsa-miR-1304-3p	243305244	243305250	7mer-m8	243305230	243305251	167.00	-29.35
CAediting_150262	chr1_243305250_+	ENSG00000054282.14	ENST00000476722	hsa-miR-24-1-5p	243305245	243305251	7mer-m8	243305230	243305252	148.00	-19.28
CAediting_150262	chr1_243305250_+	ENSG00000054282.14	ENST00000476722	hsa-miR-24-2-5p	243305245	243305251	7mer-m8	243305230	243305252	148.00	-17.81
CAediting_150264	chr1_243305327_+	ENSG00000054282.14	ENST00000476722	hsa-miR-130a-5p	243305320	243305327	8mer-1a	243305306	243305327	140.00	-7.41
CAediting_150264	chr1_243305327_+	ENSG00000054282.14	ENST00000476722	hsa-miR-4753-3p	243305321	243305327	7mer-m8	243305307	243305328	152.00	-7.51
CAediting_150265	chr1_243305825_+	ENSG00000054282.14	ENST00000476722	hsa-let-7i-3p	243305822	243305828	7mer-m8	243305808	243305829	168.00	-23.03
CAediting_150266	chr1_243305833_+	ENSG00000054282.14	ENST00000476722	hsa-miR-638	243305832	243305838	7mer-1a	243305814	243305838	147.00	-30.67
CAediting_150271	chr1_243305851_+	ENSG00000054282.14	ENST00000476722	hsa-miR-150-5p	243305844	243305850	7mer-m8	243305830	243305851	140.00	-15.81
CAediting_150271	chr1_243305851_+	ENSG00000054282.14	ENST00000476722	hsa-miR-6778-3p	243305846	243305852	7mer-m8	243305833	243305853	143.00	-13.97
CAediting_150271	chr1_243305851_+	ENSG00000054282.14	ENST00000476722	hsa-miR-6878-3p	243305848	243305855	8mer-1a	243305835	243305855	142.00	-13.55
CAediting_150272	chr1_243305855_+	ENSG00000054282.14	ENST00000476722	hsa-miR-4638-5p	243305850	243305856	7mer-m8	243305837	243305857	142.00	-16.86
CAediting_150275	chr1_243305880_+	ENSG00000054282.14	ENST00000476722	hsa-miR-378a-5p	243305875	243305881	7mer-m8	243305861	243305882	155.00	-24.57
CAediting_150278	chr1_243305893_+	ENSG00000054282.14	ENST00000476722	hsa-miR-1972	243305891	243305897	7mer-m8	243305877	243305898	149.00	-24.27
CAediting_150278	chr1_243305893_+	ENSG00000054282.14	ENST00000476722	hsa-miR-1972	243305891	243305897	7mer-m8	243305877	243305898	149.00	-24.27
CAediting_150280	chr1_243305903_+	ENSG00000054282.14	ENST00000476722	hsa-miR-193a-3p	243305897	243305904	8mer-1a	243305883	243305904	147.00	-17.48
CAediting_150280	chr1_243305903_+	ENSG00000054282.14	ENST00000476722	hsa-miR-193b-3p	243305897	243305904	8mer-1a	243305883	243305904	152.00	-20.30
CAediting_150280	chr1_243305903_+	ENSG00000054282.14	ENST00000476722	hsa-miR-3190-5p	243305896	243305902	7mer-m8	243305884	243305903	159.00	-23.24
CAediting_150283	chr1_243305913_+	ENSG00000054282.14	ENST00000476722	hsa-miR-3158-3p	243305910	243305916	7mer-m8	243305892	243305917	145.00	-20.29
CAediting_150283	chr1_243305913_+	ENSG00000054282.14	ENST00000476722	hsa-miR-3158-3p	243305910	243305916	7mer-m8	243305892	243305917	145.00	-20.29
CAediting_150284	chr1_243305924_+	ENSG00000054282.14	ENST00000476722	hsa-miR-2467-3p	243305919	243305924	6mer	243305904	243305925	141.00	-21.07
CAediting_150284	chr1_243305924_+	ENSG00000054282.14	ENST00000476722	hsa-miR-374b-3p	243305921	243305928	8mer-1a	243305903	243305928	150.00	-14.82
CAediting_150285	chr1_243305928_+	ENSG00000054282.14	ENST00000476722	hsa-miR-325	243305921	243305928	8mer-1a	243305906	243305928	141.00	-12.77
CAediting_150295	chr1_243305978_+	ENSG00000054282.14	ENST00000476722	hsa-miR-1207-3p	243305971	243305977	7mer-m8	243305960	243305978	145.00	-13.53
CAediting_150295	chr1_243305978_+	ENSG00000054282.14	ENST00000476722	hsa-miR-646	243305973	243305979	7mer-m8	243305961	243305980	148.00	-17.86
CAediting_150299	chr1_243306007_+	ENSG00000054282.14	ENST00000476722	hsa-miR-10400-3p	243306004	243306010	7mer-m8	243305990	243306011	140.00	-20.76
CAediting_150299	chr1_243306007_+	ENSG00000054282.14	ENST00000476722	hsa-miR-4437	243306003	243306010	8mer-1a	243305990	243306010	146.00	-19.60
CAediting_150299	chr1_243306007_+	ENSG00000054282.14	ENST00000476722	hsa-miR-4674	243306004	243306010	7mer-m8	243305991	243306011	147.00	-23.50
CAediting_150301	chr1_243306035_+	ENSG00000054282.14	ENST00000476722	hsa-miR-4638-5p	243306030	243306037	8mer-1a	243306018	243306037	146.00	-20.28
CAediting_150302	chr1_243306036_+	ENSG00000054282.14	ENST00000476722	hsa-miR-149-5p	243306029	243306035	7mer-m8	243306014	243306036	152.00	-21.27
CAediting_150303	chr1_243306038_+	ENSG00000054282.14	ENST00000476722	hsa-miR-212-5p	243306031	243306037	7mer-m8	243306019	243306038	158.00	-26.27
CAediting_150303	chr1_243306038_+	ENSG00000054282.14	ENST00000476722	hsa-miR-6813-3p	243306032	243306038	7mer-m8	243306018	243306039	150.00	-18.08
CAediting_150263	chr1_243305260_+	ENSG00000054282.14	ENST00000476722	hsa-miR-2277-5p	243305257	243305262	6mer	243305238	243305263	140.00	-29.32
CAediting_150276	chr1_243305888_+	ENSG00000054282.14	ENST00000476722	hsa-miR-6716-3p	243305881	243305887	7mer-m8	243305869	243305888	156.00	-23.67
CAediting_150282	chr1_243305911_+	ENSG00000054282.14	ENST00000476722	hsa-miR-182-3p	243305908	243305914	7mer-m8	243305892	243305915	144.00	-12.27
CAediting_150293	chr1_243305962_+	ENSG00000054282.14	ENST00000476722	hsa-miR-6863	243305958	243305964	7mer-m8	243305944	243305965	141.00	-14.86

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_150296	chr1_243305982_+	ENSG00000054282.14	ENST00000476722	hsa-miR-1200	243305978	243305984	7mer-m8	243305964	243305985	141	-18.61
CAediting_150291	chr1_243305958_+	ENSG00000054282.14	ENST00000476722	hsa-miR-1227-3p	243305952	243305959	8mer-1a	243305940	243305959	147	-24.79
CAediting_150279	chr1_243305902_+	ENSG00000054282.14	ENST00000476722	hsa-miR-1279	243305900	243305906	7mer-m8	243305891	243305907	140	-8.71
CAediting_150280	chr1_243305903_+	ENSG00000054282.14	ENST00000476722	hsa-miR-1279	243305900	243305906	7mer-m8	243305891	243305907	140	-8.71
CAediting_150300	chr1_243306011_+	ENSG00000054282.14	ENST00000476722	hsa-miR-1343-3p	243306007	243306013	7mer-m8	243305993	243306014	140	-19.5
CAediting_150257	chr1_243305211_+	ENSG00000054282.14	ENST00000476722	hsa-miR-1976	243305208	243305215	8mer-1a	243305195	243305215	149	-21.37
CAediting_150281	chr1_243305910_+	ENSG00000054282.14	ENST00000476722	hsa-miR-2681-5p	243305906	243305912	7mer-m8	243305889	243305913	152	-20.57
CAediting_150282	chr1_243305911_+	ENSG00000054282.14	ENST00000476722	hsa-miR-2681-5p	243305906	243305912	7mer-m8	243305889	243305913	152	-20.57
CAediting_150283	chr1_243305913_+	ENSG00000054282.14	ENST00000476722	hsa-miR-2681-5p	243305906	243305912	7mer-m8	243305889	243305913	152	-20.57
CAediting_150273	chr1_243305874_+	ENSG00000054282.14	ENST00000476722	hsa-miR-372-5p	243305868	243305874	7mer-m8	243305853	243305875	145	-20.01
CAediting_150268	chr1_243305839_+	ENSG00000054282.14	ENST00000476722	hsa-miR-4425	243305834	243305841	8mer-1a	243305818	243305841	154	-21.9
CAediting_150269	chr1_243305840_+	ENSG00000054282.14	ENST00000476722	hsa-miR-4425	243305834	243305841	8mer-1a	243305818	243305841	154	-21.9
CAediting_150279	chr1_243305902_+	ENSG00000054282.14	ENST00000476722	hsa-miR-4435	243305895	243305902	8mer-1a	243305882	243305902	146	-18.88
CAediting_150279	chr1_243305902_+	ENSG00000054282.14	ENST00000476722	hsa-miR-4435	243305895	243305902	8mer-1a	243305882	243305902	146	-18.88
CAediting_150276	chr1_243305888_+	ENSG00000054282.14	ENST00000476722	hsa-miR-4474-5p	243305886	243305892	7mer-m8	243305872	243305893	145	-14.84
CAediting_150277	chr1_243305890_+	ENSG00000054282.14	ENST00000476722	hsa-miR-4474-5p	243305886	243305892	7mer-m8	243305872	243305893	145	-14.84
CAediting_150278	chr1_243305893_+	ENSG00000054282.14	ENST00000476722	hsa-miR-4474-5p	243305886	243305892	7mer-m8	243305872	243305893	145	-14.84
CAediting_150291	chr1_243305958_+	ENSG00000054282.14	ENST00000476722	hsa-miR-4715-3p	243305951	243305957	7mer-m8	243305938	243305958	154	-25.41
CAediting_150289	chr1_243305938_+	ENSG00000054282.14	ENST00000476722	hsa-miR-4735-5p	243305936	243305942	7mer-m8	243305922	243305943	148	-5.48
CAediting_150290	chr1_243305939_+	ENSG00000054282.14	ENST00000476722	hsa-miR-4735-5p	243305936	243305942	7mer-m8	243305922	243305943	148	-5.48
CAediting_150270	chr1_243305842_+	ENSG00000054282.14	ENST00000476722	hsa-miR-520g-3p	243305840	243305846	7mer-m8	243305825	243305847	146	-9.98
CAediting_150270	chr1_243305842_+	ENSG00000054282.14	ENST00000476722	hsa-miR-520h	243305840	243305846	7mer-m8	243305827	243305847	146	-9.24
CAediting_150293	chr1_243305962_+	ENSG00000054282.14	ENST00000476722	hsa-miR-5683	243305960	243305967	8mer-1a	243305944	243305967	140	-17.46
CAediting_150292	chr1_243305960_+	ENSG00000054282.14	ENST00000476722	hsa-miR-576-3p	243305958	243305964	7mer-m8	243305944	243305965	140	-11.06
CAediting_150293	chr1_243305962_+	ENSG00000054282.14	ENST00000476722	hsa-miR-576-3p	243305958	243305964	7mer-m8	243305944	243305965	140	-11.06
CAediting_150268	chr1_243305839_+	ENSG00000054282.14	ENST00000476722	hsa-miR-6513-5p	243305833	243305839	7mer-m8	243305817	243305840	149	-17.08
CAediting_150269	chr1_243305840_+	ENSG00000054282.14	ENST00000476722	hsa-miR-6513-5p	243305833	243305839	7mer-m8	243305817	243305840	149	-17.08
CAediting_150300	chr1_243306011_+	ENSG00000054282.14	ENST00000476722	hsa-miR-6742-3p	243306006	243306013	8mer-1a	243305994	243306013	145	-14.93
CAediting_150257	chr1_243305211_+	ENSG00000054282.14	ENST00000476722	hsa-miR-6747-3p	243305206	243305213	8mer-1a	243305192	243305213	150	-24.11
CAediting_150255	chr1_243305174_+	ENSG00000054282.14	ENST00000476722	hsa-miR-6767-3p	243305171	243305177	7mer-m8	243305157	243305178	151	-21.93
CAediting_150300	chr1_243306011_+	ENSG00000054282.14	ENST00000476722	hsa-miR-6783-3p	243306007	243306013	7mer-m8	243305994	243306014	146	-16.82
CAediting_150283	chr1_243305913_+	ENSG00000054282.14	ENST00000476722	hsa-miR-6823-5p	243305911	243305917	7mer-m8	243305898	243305918	140	-16.41
CAediting_150284	chr1_243305924_+	ENSG00000054282.14	ENST00000476722	hsa-miR-6832-5p	243305918	243305924	7mer-m8	243305903	243305925	140	-18.87
CAediting_150263	chr1_243305260_+	ENSG00000054282.14	ENST00000476722	hsa-miR-6843-3p	243305253	243305259	7mer-m8	243305241	243305260	153	-21.59
CAediting_150263	chr1_243305260_+	ENSG00000054282.14	ENST00000476722	hsa-miR-6848-3p	243305253	243305259	7mer-m8	243305242	243305260	140	-15.85
CAediting_150295	chr1_243305978_+	ENSG00000054282.14	ENST00000476722	hsa-miR-6869-5p	243305975	243305981	7mer-m8	243305959	243305982	152	-19.96
CAediting_150296	chr1_243305982_+	ENSG00000054282.14	ENST00000476722	hsa-miR-6869-5p	243305975	243305981	7mer-m8	243305959	243305982	152	-19.96
CAediting_150256	chr1_243305184_+	ENSG00000054282.14	ENST00000476722	hsa-miR-7151-3p	243305177	243305183	7mer-m8	243305168	243305184	142	-18.09
CAediting_150256	chr1_243305184_+	ENSG00000054282.14	ENST00000476722	hsa-miR-8052	243305183	243305189	7mer-1a	243305169	243305189	141	-25.02
CAediting_150294	chr1_243305968_+	ENSG00000054282.14	ENST00000476722	hsa-miR-8052	243305967	243305973	7mer-1a	243305952	243305973	142	-20.68
CAediting_150259	chr1_243305217_+	ENSG00000054282.14	ENST00000476722	hsa-miR-8062	243305215	243305221	7mer-m8	243305202	243305222	141	-10.43
CAediting_150260	chr1_243305220_+	ENSG00000054282.14	ENST00000476722	hsa-miR-8062	243305215	243305221	7mer-m8	243305202	243305222	141	-10.43
CAediting_150297	chr1_243306001_+	ENSG00000054282.14	ENST00000476722	hsa-miR-8062	243305996	243306002	7mer-m8	243305983	243306003	141	-9.33

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000054282.14	ENST00000476722	hsa-miR-624-3p	243305912	243305918	7mer-m8	243305899	243305919	156	-15.26

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for SDCCAG8

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000476722.5	protein_coding
ENST00000482234.1	processed_transcript
ENST00000496361.1	processed_transcript

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_150246	ENST00000476722.5	chr1_243305051_+	-459.70	-459.20	-517.70
CAediting_150247	ENST00000476722.5	chr1_243305084_+	-459.70	-459.20	-517.70
CAediting_150248	ENST00000476722.5	chr1_243305087_+	-458.90	-459.20	-517.70
CAediting_150249	ENST00000476722.5	chr1_243305096_+	-465.80	-459.20	-517.70
CAediting_150250	ENST00000476722.5	chr1_243305129_+	-462.40	-459.20	-517.70
CAediting_150251	ENST00000476722.5	chr1_243305140_+	-462.50	-459.20	-517.70
CAediting_150252	ENST00000476722.5	chr1_243305149_+	-459.20	-459.20	-517.70
CAediting_150253	ENST00000476722.5	chr1_243305158_+	-459.50	-459.20	-517.70
CAediting_150254	ENST00000476722.5	chr1_243305171_+	-461.00	-459.20	-517.70
CAediting_150255	ENST00000476722.5	chr1_243305174_+	-459.20	-459.20	-517.70
CAediting_150256	ENST00000476722.5	chr1_243305184_+	-460.10	-459.20	-517.70
CAediting_150257	ENST00000476722.5	chr1_243305211_+	-458.40	-459.20	-517.70
CAediting_150258	ENST00000476722.5	chr1_243305216_+	-461.20	-459.20	-517.70
CAediting_150259	ENST00000476722.5	chr1_243305217_+	-459.70	-459.20	-517.70
CAediting_150260	ENST00000476722.5	chr1_243305220_+	-458.80	-459.20	-517.70
CAediting_150261	ENST00000476722.5	chr1_243305249_+	-463.80	-459.20	-517.70
CAediting_150262	ENST00000476722.5	chr1_243305250_+	-463.80	-459.20	-517.70
CAediting_150263	ENST00000476722.5	chr1_243305260_+	-459.20	-459.20	-517.70
CAediting_150264	ENST00000476722.5	chr1_243305327_+	-459.30	-459.20	-517.70
CAediting_150265	ENST00000476722.5	chr1_243305825_+	-460.30	-459.20	-517.70
CAediting_150266	ENST00000476722.5	chr1_243305833_+	-463.20	-459.20	-517.70
CAediting_150267	ENST00000476722.5	chr1_243305834_+	-459.90	-459.20	-517.70
CAediting_150268	ENST00000476722.5	chr1_243305839_+	-459.90	-459.20	-517.70
CAediting_150269	ENST00000476722.5	chr1_243305840_+	-460.20	-459.20	-517.70
CAediting_150270	ENST00000476722.5	chr1_243305842_+	-462.60	-459.20	-517.70
CAediting_150271	ENST00000476722.5	chr1_243305851_+	-461.70	-459.20	-517.70
CAediting_150272	ENST00000476722.5	chr1_243305855_+	-461.70	-459.20	-517.70
CAediting_150273	ENST00000476722.5	chr1_243305874_+	-461.00	-459.20	-517.70
CAediting_150274	ENST00000476722.5	chr1_243305879_+	-459.10	-459.20	-517.70
CAediting_150275	ENST00000476722.5	chr1_243305880_+	-465.10	-459.20	-517.70
CAediting_150276	ENST00000476722.5	chr1_243305888_+	-460.90	-459.20	-517.70
CAediting_150277	ENST00000476722.5	chr1_243305890_+	-462.30	-459.20	-517.70
CAediting_150278	ENST00000476722.5	chr1_243305893_+	-461.90	-459.20	-517.70
CAediting_150279	ENST00000476722.5	chr1_243305902_+	-460.90	-459.20	-517.70
CAediting_150280	ENST00000476722.5	chr1_243305903_+	-461.80	-459.20	-517.70
CAediting_150281	ENST00000476722.5	chr1_243305910_+	-459.70	-459.20	-517.70
CAediting_150282	ENST00000476722.5	chr1_243305911_+	-462.30	-459.20	-517.70
CAediting_150283	ENST00000476722.5	chr1_243305913_+	-461.10	-459.20	-517.70
CAediting_150284	ENST00000476722.5	chr1_243305924_+	-461.90	-459.20	-517.70
CAediting_150285	ENST00000476722.5	chr1_243305928_+	-460.50	-459.20	-517.70
CAediting_150286	ENST00000476722.5	chr1_243305929_+	-459.50	-459.20	-517.70
CAediting_150287	ENST00000476722.5	chr1_243305930_+	-460.20	-459.20	-517.70
CAediting_150288	ENST00000476722.5	chr1_243305936_+	-459.50	-459.20	-517.70
CAediting_150289	ENST00000476722.5	chr1_243305938_+	-459.30	-459.20	-517.70
CAediting_150290	ENST00000476722.5	chr1_243305939_+	-459.20	-459.20	-517.70
CAediting_150291	ENST00000476722.5	chr1_243305958_+	-459.10	-459.20	-517.70
CAediting_150292	ENST00000476722.5	chr1_243305960_+	-460.60	-459.20	-517.70
CAediting_150293	ENST00000476722.5	chr1_243305962_+	-459.50	-459.20	-517.70
CAediting_150294	ENST00000476722.5	chr1_243305968_+	-461.00	-459.20	-517.70
CAediting_150295	ENST00000476722.5	chr1_243305978_+	-459.20	-459.20	-517.70
CAediting_150296	ENST00000476722.5	chr1_243305982_+	-458.70	-459.20	-517.70
CAediting_150297	ENST00000476722.5	chr1_243306001_+	-460.90	-459.20	-517.70
CAediting_150298	ENST00000476722.5	chr1_243306006_+	-461.30	-459.20	-517.70
CAediting_150299	ENST00000476722.5	chr1_243306007_+	-460.50	-459.20	-517.70
CAediting_150300	ENST00000476722.5	chr1_243306011_+	-460.00	-459.20	-517.70
CAediting_150301	ENST00000476722.5	chr1_243306035_+	-459.20	-459.20	-517.70
CAediting_150302	ENST00000476722.5	chr1_243306036_+	-459.00	-459.20	-517.70
CAediting_150303	ENST00000476722.5	chr1_243306038_+	-459.00	-459.20	-517.70
CAediting_150304	ENST00000476722.5	chr1_243306041_+	-462.40	-459.20	-517.70
CAediting_150246	ENST00000482234.1	chr1_243305051_+	-135.90	-135.60	-137.40
CAediting_150247	ENST00000482234.1	chr1_243305084_+	-136.90	-135.60	-137.40
CAediting_150248	ENST00000482234.1	chr1_243305087_+	-135.60	-135.60	-137.40
CAediting_150246	ENST00000496361.1	chr1_243305051_+	-226.90	-226.60	-252.90
CAediting_150247	ENST00000496361.1	chr1_243305084_+	-229.60	-226.60	-252.90
CAediting_150248	ENST00000496361.1	chr1_243305087_+	-228.20	-226.60	-252.90
CAediting_150249	ENST00000496361.1	chr1_243305096_+	-233.20	-226.60	-252.90
CAediting_150250	ENST00000496361.1	chr1_243305129_+	-228.00	-226.60	-252.90
CAediting_150251	ENST00000496361.1	chr1_243305140_+	-229.90	-226.60	-252.90
CAediting_150252	ENST00000496361.1	chr1_243305149_+	-226.60	-226.60	-252.90
CAediting_150253	ENST00000496361.1	chr1_243305158_+	-226.90	-226.60	-252.90
CAediting_150254	ENST00000496361.1	chr1_243305171_+	-229.40	-226.60	-252.90
CAediting_150255	ENST00000496361.1	chr1_243305174_+	-226.60	-226.60	-252.90
CAediting_150256	ENST00000496361.1	chr1_243305184_+	-228.50	-226.60	-252.90
CAediting_150257	ENST00000496361.1	chr1_243305211_+	-226.70	-226.60	-252.90
CAediting_150258	ENST00000496361.1	chr1_243305216_+	-228.60	-226.60	-252.90
CAediting_150259	ENST00000496361.1	chr1_243305217_+	-227.60	-226.60	-252.90
CAediting_150260	ENST00000496361.1	chr1_243305220_+	-226.90	-226.60	-252.90
CAediting_150261	ENST00000496361.1	chr1_243305249_+	-231.20	-226.60	-252.90
CAediting_150262	ENST00000496361.1	chr1_243305250_+	-231.20	-226.60	-252.90
CAediting_150263	ENST00000496361.1	chr1_243305260_+	-226.60	-226.60	-252.90
CAediting_150264	ENST00000496361.1	chr1_243305327_+	-227.20	-226.60	-252.90

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Relation with ADAR for SDCCAG8

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
STAD	CAediting_150207	chr1_243266823_+	0.00672563170015581	0.361298977992859	.	.	.	.

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Relation with cancer stages for SDCCAG8

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for SDCCAG8

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for SDCCAG8

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for SDCCAG8

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
SDCCAG8	C3150877	SENIOR-LOKEN SYNDROME 7	3	GENOMICS_ENGLAND
SDCCAG8	C3889474	BARDET-BIEDL SYNDROME 16	3	CTD_human;GENOMICS_ENGLAND
SDCCAG8	C0403553	Renal dysplasia and retinal aplasia (disorder)	2	GENOMICS_ENGLAND;ORPHANET
SDCCAG8	C0752166	Bardet-Biedl Syndrome	2	GENOMICS_ENGLAND;ORPHANET
SDCCAG8	C0022679	Cystic kidney	1	CTD_human
SDCCAG8	C0035309	Retinal Diseases	1	CTD_human
SDCCAG8	C0036341	Schizophrenia	1	PSYGENET
SDCCAG8	C1691228	Cystic Kidney Diseases	1	CTD_human
SDCCAG8	C3714756	Intellectual Disability	1	GENOMICS_ENGLAND

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene