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Editing gene: RBBP9 (CAeditome ID:10741)

Gene summary for RBBP9

Gene summary

Gene information	Gene symbol	RBBP9
	Gene ID	10741
	Gene name	RB binding protein 9, serine hydrolase
	Synonyms	BOG\|RBBP10
	Cytomap	20p11.23
	Type of gene	protein-coding
	Description	serine hydrolase RBBP9B5T overexpressed gene proteinRBBP-10RBBP-9putative hydrolase RBBP9retinoblastoma-binding protein 10retinoblastoma-binding protein 9retinoma-binding protein 9
	Modification date	20210518
	UniProtAcc	O75884
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
RBBP9	GO:0005654	Serine hydrolase RBBP9	0000052

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RNA A-to-I events for RBBP9

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000089050.13

RNA A-to-I editing events in Cancer.

CAediting_1408301(18487686, -), CAediting_1408302(18487689, -), CAediting_1408303(18487693, -), CAediting_1408304(18487695, -), CAediting_1408305(18487707, -), CAediting_1408306(18487708, -), CAediting_1408307(18487709, -), CAediting_1408308(18487717, -), CAediting_1408309(18487722, -), CAediting_1408310(18487734, -), CAediting_1408311(18487735, -), CAediting_1408312(18487760, -), CAediting_1408313(18487769, -), CAediting_1408314(18487772, -), CAediting_1408315(18487784, -), CAediting_1408316(18487786, -), CAediting_1408317(18487789, -), CAediting_1408318(18487804, -), CAediting_1408319(18487814, -), CAediting_1408320(18487817, -), CAediting_1408321(18487824, -), CAediting_1408322(18487828, -), CAediting_1408323(18487829, -), CAediting_1408324(18487830, -), CAediting_1408325(18487833, -), CAediting_1408326(18487834, -), CAediting_1408327(18487840, -), CAediting_1408328(18487867, -), CAediting_1408329(18487868, -), CAediting_1408330(18487888, -), CAediting_1408331(18487893, -), CAediting_1408332(18487898, -), CAediting_1408333(18487907, -), CAediting_1408334(18487918, -), CAediting_1408335(18487945, -), CAediting_1408336(18487947, -), CAediting_1408337(18488297, -), CAediting_1408338(18488321, -), CAediting_1408339(18488326, -), CAediting_1408340(18488341, -), CAediting_1408341(18488361, -), CAediting_1408342(18488366, -), CAediting_1408343(18488377, -), CAediting_1408344(18488381, -), CAediting_1408345(18488387, -), CAediting_1408346(18488410, -), CAediting_1408347(18488412, -), CAediting_1408348(18488422, -), CAediting_1408349(18488426, -), CAediting_1408350(18488430, -), CAediting_1408351(18488433, -), CAediting_1408352(18488435, -), CAediting_1408353(18488437, -), CAediting_1408354(18488438, -), CAediting_1408355(18488441, -), CAediting_1408356(18488443, -), CAediting_1408357(18488444, -), CAediting_1408358(18488445, -), CAediting_1408359(18488446, -), CAediting_1408360(18488448, -), CAediting_1408361(18488459, -), CAediting_1408362(18488461, -), CAediting_1408363(18488465, -), CAediting_1408364(18488467, -), CAediting_1408365(18488469, -), CAediting_1408366(18488475, -), CAediting_1408367(18488479, -), CAediting_1408368(18488484, -), CAediting_1408369(18488498, -), CAediting_1408370(18488506, -), CAediting_1408371(18488516, -), CAediting_1408372(18488522, -), CAediting_1408373(18488533, -), CAediting_1408374(18488538, -), CAediting_1408375(18488539, -), CAediting_1408376(18488547, -),

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RNA editing positional annotations for RBBP9 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1408301	chr20_18487686_-	UTR3
CAediting_1408302	chr20_18487689_-	UTR3
CAediting_1408303	chr20_18487693_-	UTR3
CAediting_1408304	chr20_18487695_-	UTR3
CAediting_1408305	chr20_18487707_-	UTR3
CAediting_1408306	chr20_18487708_-	UTR3
CAediting_1408307	chr20_18487709_-	UTR3
CAediting_1408308	chr20_18487717_-	UTR3
CAediting_1408309	chr20_18487722_-	UTR3
CAediting_1408310	chr20_18487734_-	UTR3
CAediting_1408311	chr20_18487735_-	UTR3
CAediting_1408312	chr20_18487760_-	UTR3
CAediting_1408313	chr20_18487769_-	UTR3
CAediting_1408314	chr20_18487772_-	UTR3
CAediting_1408315	chr20_18487784_-	UTR3
CAediting_1408316	chr20_18487786_-	UTR3
CAediting_1408317	chr20_18487789_-	UTR3
CAediting_1408318	chr20_18487804_-	UTR3
CAediting_1408319	chr20_18487814_-	UTR3
CAediting_1408320	chr20_18487817_-	UTR3
CAediting_1408321	chr20_18487824_-	UTR3
CAediting_1408322	chr20_18487828_-	UTR3
CAediting_1408323	chr20_18487829_-	UTR3
CAediting_1408324	chr20_18487830_-	UTR3
CAediting_1408325	chr20_18487833_-	UTR3
CAediting_1408326	chr20_18487834_-	UTR3
CAediting_1408327	chr20_18487840_-	UTR3
CAediting_1408328	chr20_18487867_-	UTR3
CAediting_1408329	chr20_18487868_-	UTR3
CAediting_1408330	chr20_18487888_-	UTR3
CAediting_1408331	chr20_18487893_-	UTR3
CAediting_1408332	chr20_18487898_-	UTR3
CAediting_1408333	chr20_18487907_-	UTR3
CAediting_1408334	chr20_18487918_-	UTR3
CAediting_1408335	chr20_18487945_-	UTR3
CAediting_1408336	chr20_18487947_-	UTR3
CAediting_1408337	chr20_18488297_-	UTR3
CAediting_1408338	chr20_18488321_-	UTR3
CAediting_1408339	chr20_18488326_-	UTR3
CAediting_1408340	chr20_18488341_-	UTR3
CAediting_1408341	chr20_18488361_-	UTR3
CAediting_1408342	chr20_18488366_-	UTR3
CAediting_1408343	chr20_18488377_-	UTR3
CAediting_1408344	chr20_18488381_-	UTR3
CAediting_1408345	chr20_18488387_-	UTR3
CAediting_1408346	chr20_18488410_-	UTR3
CAediting_1408347	chr20_18488412_-	UTR3
CAediting_1408348	chr20_18488422_-	UTR3
CAediting_1408349	chr20_18488426_-	UTR3
CAediting_1408350	chr20_18488430_-	UTR3
CAediting_1408351	chr20_18488433_-	UTR3
CAediting_1408352	chr20_18488435_-	UTR3
CAediting_1408353	chr20_18488437_-	UTR3
CAediting_1408354	chr20_18488438_-	UTR3
CAediting_1408355	chr20_18488441_-	UTR3
CAediting_1408356	chr20_18488443_-	UTR3
CAediting_1408357	chr20_18488444_-	UTR3
CAediting_1408358	chr20_18488445_-	UTR3
CAediting_1408359	chr20_18488446_-	UTR3
CAediting_1408360	chr20_18488448_-	UTR3
CAediting_1408361	chr20_18488459_-	UTR3
CAediting_1408362	chr20_18488461_-	UTR3
CAediting_1408363	chr20_18488465_-	UTR3
CAediting_1408364	chr20_18488467_-	UTR3
CAediting_1408365	chr20_18488469_-	UTR3
CAediting_1408366	chr20_18488475_-	UTR3
CAediting_1408367	chr20_18488479_-	UTR3
CAediting_1408368	chr20_18488484_-	UTR3
CAediting_1408369	chr20_18488498_-	UTR3
CAediting_1408370	chr20_18488506_-	UTR3
CAediting_1408371	chr20_18488516_-	UTR3
CAediting_1408372	chr20_18488522_-	UTR3
CAediting_1408373	chr20_18488533_-	UTR3
CAediting_1408374	chr20_18488538_-	UTR3
CAediting_1408375	chr20_18488539_-	UTR3
CAediting_1408376	chr20_18488547_-	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1408301	chr20_18487686_-	SINE	Alu	AluSz6
CAediting_1408302	chr20_18487689_-	SINE	Alu	AluSz6
CAediting_1408303	chr20_18487693_-	SINE	Alu	AluSz6
CAediting_1408304	chr20_18487695_-	SINE	Alu	AluSz6
CAediting_1408305	chr20_18487707_-	SINE	Alu	AluSz6
CAediting_1408306	chr20_18487708_-	SINE	Alu	AluSz6
CAediting_1408307	chr20_18487709_-	SINE	Alu	AluSz6
CAediting_1408308	chr20_18487717_-	SINE	Alu	AluSz6
CAediting_1408309	chr20_18487722_-	SINE	Alu	AluSz6
CAediting_1408310	chr20_18487734_-	SINE	Alu	AluSz6
CAediting_1408311	chr20_18487735_-	SINE	Alu	AluSz6
CAediting_1408312	chr20_18487760_-	SINE	Alu	AluSz6
CAediting_1408313	chr20_18487769_-	SINE	Alu	AluSz6
CAediting_1408314	chr20_18487772_-	SINE	Alu	AluSz6
CAediting_1408315	chr20_18487784_-	SINE	Alu	AluSz6
CAediting_1408316	chr20_18487786_-	SINE	Alu	AluSz6
CAediting_1408317	chr20_18487789_-	SINE	Alu	AluSz6
CAediting_1408318	chr20_18487804_-	SINE	Alu	AluSz6
CAediting_1408319	chr20_18487814_-	SINE	Alu	AluSz6
CAediting_1408320	chr20_18487817_-	SINE	Alu	AluSz6
CAediting_1408321	chr20_18487824_-	SINE	Alu	AluSz6
CAediting_1408322	chr20_18487828_-	SINE	Alu	AluSz6
CAediting_1408323	chr20_18487829_-	SINE	Alu	AluSz6
CAediting_1408324	chr20_18487830_-	SINE	Alu	AluSz6
CAediting_1408325	chr20_18487833_-	SINE	Alu	AluSz6
CAediting_1408326	chr20_18487834_-	SINE	Alu	AluSz6
CAediting_1408327	chr20_18487840_-	SINE	Alu	AluSz6
CAediting_1408328	chr20_18487867_-	SINE	Alu	AluSz6
CAediting_1408329	chr20_18487868_-	SINE	Alu	AluSz6
CAediting_1408330	chr20_18487888_-	SINE	Alu	AluSz6
CAediting_1408331	chr20_18487893_-	SINE	Alu	AluSz6
CAediting_1408332	chr20_18487898_-	SINE	Alu	AluSz6
CAediting_1408333	chr20_18487907_-	SINE	Alu	AluSz6
CAediting_1408334	chr20_18487918_-	SINE	Alu	AluSz6
CAediting_1408335	chr20_18487945_-	SINE	Alu	AluSz6
CAediting_1408336	chr20_18487947_-	SINE	Alu	AluSz6
CAediting_1408337	chr20_18488297_-	SINE	Alu	AluJr
CAediting_1408338	chr20_18488321_-	SINE	Alu	AluJr
CAediting_1408339	chr20_18488326_-	SINE	Alu	AluJr
CAediting_1408340	chr20_18488341_-	SINE	Alu	AluJr
CAediting_1408341	chr20_18488361_-	SINE	Alu	AluJr
CAediting_1408342	chr20_18488366_-	SINE	Alu	AluJr
CAediting_1408343	chr20_18488377_-	SINE	Alu	AluJr
CAediting_1408344	chr20_18488381_-	SINE	Alu	AluJr
CAediting_1408345	chr20_18488387_-	SINE	Alu	AluJr
CAediting_1408346	chr20_18488410_-	SINE	Alu	AluJr
CAediting_1408347	chr20_18488412_-	SINE	Alu	AluJr
CAediting_1408348	chr20_18488422_-	SINE	Alu	AluJr
CAediting_1408349	chr20_18488426_-	SINE	Alu	AluJr
CAediting_1408350	chr20_18488430_-	SINE	Alu	AluJr
CAediting_1408351	chr20_18488433_-	SINE	Alu	AluJr
CAediting_1408352	chr20_18488435_-	SINE	Alu	AluJr
CAediting_1408353	chr20_18488437_-	SINE	Alu	AluJr
CAediting_1408354	chr20_18488438_-	SINE	Alu	AluJr
CAediting_1408355	chr20_18488441_-	SINE	Alu	AluJr
CAediting_1408356	chr20_18488443_-	SINE	Alu	AluJr
CAediting_1408357	chr20_18488444_-	SINE	Alu	AluJr
CAediting_1408358	chr20_18488445_-	SINE	Alu	AluJr
CAediting_1408359	chr20_18488446_-	SINE	Alu	AluJr
CAediting_1408360	chr20_18488448_-	SINE	Alu	AluJr
CAediting_1408361	chr20_18488459_-	SINE	Alu	AluJr
CAediting_1408362	chr20_18488461_-	SINE	Alu	AluJr
CAediting_1408363	chr20_18488465_-	SINE	Alu	AluJr
CAediting_1408364	chr20_18488467_-	SINE	Alu	AluJr
CAediting_1408365	chr20_18488469_-	SINE	Alu	AluJr
CAediting_1408366	chr20_18488475_-	SINE	Alu	AluJr
CAediting_1408367	chr20_18488479_-	SINE	Alu	AluJr
CAediting_1408368	chr20_18488484_-	SINE	Alu	AluJr
CAediting_1408369	chr20_18488498_-	SINE	Alu	AluJr
CAediting_1408370	chr20_18488506_-	SINE	Alu	AluJr
CAediting_1408371	chr20_18488516_-	SINE	Alu	AluJr
CAediting_1408372	chr20_18488522_-	SINE	Alu	AluJr
CAediting_1408373	chr20_18488533_-	SINE	Alu	AluJr
CAediting_1408374	chr20_18488538_-	SINE	Alu	AluJr
CAediting_1408375	chr20_18488539_-	SINE	Alu	AluJr
CAediting_1408376	chr20_18488547_-	SINE	Alu	AluJr

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RNA A-to-I editing events in the alternative splicing sites for RBBP9

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_1408302	chr20_18487689_-	18487689:18487711	3SS	3+0i	CCAAAGTGTTGGGATTACAGGCA	-0.29	CCAAAGTGTTGGGATTACAGGCG	-0.35
IR	CAediting_1408303	chr20_18487693_-	18487689:18487711	3SS	0+2i	CCAAAGTGTTGGGATTACAGGCA	-0.29	CCAAAGTGTTGGGATTACGGGCA	-8.24
IR	CAediting_1408304	chr20_18487695_-	18487689:18487711	3SS	0+4i	CCAAAGTGTTGGGATTACAGGCA	-0.29	CCAAAGTGTTGGGATTGCAGGCA	0.68
IR	CAediting_1408305	chr20_18487707_-	18487689:18487711	3SS	0+16i	CCAAAGTGTTGGGATTACAGGCA	-0.29	CCAAGGTGTTGGGATTACAGGCA	0.26
IR	CAediting_1408306	chr20_18487708_-	18487689:18487711	3SS	0+17i	CCAAAGTGTTGGGATTACAGGCA	-0.29	CCAGAGTGTTGGGATTACAGGCA	-0.91
IR	CAediting_1408307	chr20_18487709_-	18487689:18487711	3SS	0+18i	CCAAAGTGTTGGGATTACAGGCA	-0.29	CCGAAGTGTTGGGATTACAGGCA	-0.12

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000089050.13.RBBP9.

Correlation between RNA A-to-I editing and PSI for ENSG00000089050.13.RBBP9.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RBBP9

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

BRCA.CAediting_1408304.ENSG00000089050.RBBP9.png
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BRCA.CAediting_1408305.ENSG00000089050.RBBP9.png
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BRCA.CAediting_1408374.ENSG00000089050.RBBP9.png
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BRCA.CAediting_1408375.ENSG00000089050.RBBP9.png
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KIRC.CAediting_1408346.ENSG00000089050.RBBP9.png
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KIRC.CAediting_1408374.ENSG00000089050.RBBP9.png
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KIRC.CAediting_1408375.ENSG00000089050.RBBP9.png
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MESO.CAediting_1408304.ENSG00000089050.RBBP9.png
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PRAD.CAediting_1408304.ENSG00000089050.RBBP9.png
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PRAD.CAediting_1408305.ENSG00000089050.RBBP9.png
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TGCT.CAediting_1408329.ENSG00000089050.RBBP9.png
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TGCT.CAediting_1408346.ENSG00000089050.RBBP9.png
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TGCT.CAediting_1408374.ENSG00000089050.RBBP9.png
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TGCT.CAediting_1408375.ENSG00000089050.RBBP9.png
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Protein coding region RNA A-to-I editings for RBBP9

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for RBBP9

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1408301	chr20_18487686_-	ENSG00000089050.13	ENST00000337227	hsa-miR-4641	18487684	18487690	7mer-m8	18487683	18487707	156.00	-19.70
CAediting_1408301	chr20_18487686_-	ENSG00000089050.13	ENST00000337227	hsa-miR-663b	18487681	18487687	7mer-m8	18487680	18487705	153.00	-30.96
CAediting_1408301	chr20_18487686_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6872-3p	18487686	18487692	7mer-m8	18487685	18487705	145.00	-23.14
CAediting_1408305	chr20_18487707_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3189-3p	18487706	18487712	7mer-m8	18487705	18487728	161.00	-25.21
CAediting_1408305	chr20_18487707_-	ENSG00000089050.13	ENST00000337227	hsa-miR-635	18487707	18487713	7mer-m8	18487706	18487729	148.00	-16.90
CAediting_1408305	chr20_18487707_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6774-5p	18487707	18487713	7mer-m8	18487706	18487732	149.00	-21.50
CAediting_1408305	chr20_18487707_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6813-3p	18487705	18487711	7mer-m8	18487704	18487724	142.00	-10.68
CAediting_1408306	chr20_18487708_-	ENSG00000089050.13	ENST00000337227	hsa-miR-326	18487706	18487712	7mer-m8	18487705	18487724	145.00	-14.88
CAediting_1408306	chr20_18487708_-	ENSG00000089050.13	ENST00000337227	hsa-miR-330-5p	18487706	18487712	7mer-m8	18487705	18487728	149.00	-21.19
CAediting_1408306	chr20_18487708_-	ENSG00000089050.13	ENST00000337227	hsa-miR-4486	18487707	18487714	8mer-1a	18487707	18487721	148.00	-21.48
CAediting_1408306	chr20_18487708_-	ENSG00000089050.13	ENST00000337227	hsa-miR-514a-5p	18487705	18487711	7mer-m8	18487704	18487727	142.00	-15.25
CAediting_1408306	chr20_18487708_-	ENSG00000089050.13	ENST00000337227	hsa-miR-514a-5p	18487705	18487711	7mer-m8	18487704	18487727	142.00	-15.25
CAediting_1408306	chr20_18487708_-	ENSG00000089050.13	ENST00000337227	hsa-miR-514a-5p	18487705	18487711	7mer-m8	18487704	18487727	142.00	-15.25
CAediting_1408307	chr20_18487709_-	ENSG00000089050.13	ENST00000337227	hsa-miR-4750-5p	18487707	18487714	8mer-1a	18487707	18487731	165.00	-29.96
CAediting_1408308	chr20_18487717_-	ENSG00000089050.13	ENST00000337227	hsa-miR-1199-3p	18487712	18487718	7mer-m8	18487711	18487731	143.00	-18.32
CAediting_1408310	chr20_18487734_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3622a-3p	18487730	18487737	8mer-1a	18487730	18487751	140.00	-15.99
CAediting_1408310	chr20_18487734_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3622b-3p	18487730	18487737	8mer-1a	18487730	18487750	149.00	-20.31
CAediting_1408310	chr20_18487734_-	ENSG00000089050.13	ENST00000337227	hsa-miR-4649-3p	18487734	18487740	7mer-m8	18487733	18487753	147.00	-18.42
CAediting_1408312	chr20_18487760_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3940-3p	18487756	18487762	7mer-m8	18487755	18487773	144.00	-24.53
CAediting_1408318	chr20_18487804_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3157-5p	18487803	18487809	7mer-m8	18487802	18487825	164.00	-23.75
CAediting_1408318	chr20_18487804_-	ENSG00000089050.13	ENST00000337227	hsa-miR-34a-3p	18487801	18487807	7mer-m8	18487800	18487821	147.00	-8.76
CAediting_1408322	chr20_18487828_-	ENSG00000089050.13	ENST00000337227	hsa-miR-938	18487824	18487831	8mer-1a	18487824	18487845	140.00	-14.29
CAediting_1408325	chr20_18487833_-	ENSG00000089050.13	ENST00000337227	hsa-miR-342-3p	18487833	18487839	7mer-m8	18487832	18487854	140.00	-11.82
CAediting_1408327	chr20_18487840_-	ENSG00000089050.13	ENST00000337227	hsa-miR-1255b-2-3p	18487838	18487844	7mer-m8	18487837	18487858	142.00	-10.54
CAediting_1408327	chr20_18487840_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3614-5p	18487840	18487846	7mer-m8	18487839	18487856	145.00	-24.19
CAediting_1408328	chr20_18487867_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3622a-3p	18487863	18487870	8mer-1a	18487863	18487884	148.00	-19.43
CAediting_1408328	chr20_18487867_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3622b-3p	18487863	18487870	8mer-1a	18487863	18487883	153.00	-23.91
CAediting_1408328	chr20_18487867_-	ENSG00000089050.13	ENST00000337227	hsa-miR-4539	18487867	18487872	6mer	18487866	18487888	143.00	-22.41
CAediting_1408330	chr20_18487888_-	ENSG00000089050.13	ENST00000337227	hsa-miR-10393-3p	18487885	18487891	7mer-m8	18487884	18487904	150.00	-13.41
CAediting_1408330	chr20_18487888_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6801-5p	18487885	18487891	7mer-m8	18487884	18487906	161.00	-19.48
CAediting_1408330	chr20_18487888_-	ENSG00000089050.13	ENST00000337227	hsa-miR-759	18487887	18487894	8mer-1a	18487887	18487910	147.00	-14.51
CAediting_1408334	chr20_18487918_-	ENSG00000089050.13	ENST00000337227	hsa-miR-361-3p	18487916	18487922	7mer-m8	18487915	18487938	151.00	-18.82
CAediting_1408334	chr20_18487918_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6859-3p	18487913	18487920	8mer-1a	18487913	18487934	147.00	-25.39
CAediting_1408334	chr20_18487918_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6859-3p	18487913	18487920	8mer-1a	18487913	18487934	147.00	-25.39
CAediting_1408334	chr20_18487918_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6859-3p	18487913	18487920	8mer-1a	18487913	18487934	147.00	-25.39
CAediting_1408334	chr20_18487918_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6859-3p	18487913	18487920	8mer-1a	18487913	18487934	147.00	-25.39
CAediting_1408344	chr20_18488381_-	ENSG00000089050.13	ENST00000337227	hsa-miR-1913	18488376	18488382	7mer-m8	18488375	18488396	147.00	-22.10
CAediting_1408344	chr20_18488381_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6849-3p	18488381	18488387	7mer-m8	18488380	18488401	140.00	-16.72
CAediting_1408350	chr20_18488430_-	ENSG00000089050.13	ENST00000337227	hsa-miR-4662a-5p	18488426	18488432	7mer-m8	18488425	18488447	159.00	-12.52
CAediting_1408353	chr20_18488437_-	ENSG00000089050.13	ENST00000337227	hsa-miR-576-5p	18488435	18488441	7mer-m8	18488434	18488455	144.00	-4.19
CAediting_1408355	chr20_18488441_-	ENSG00000089050.13	ENST00000337227	hsa-miR-302c-5p	18488436	18488443	8mer-1a	18488436	18488457	140.00	-10.20
CAediting_1408355	chr20_18488441_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3143	18488437	18488444	8mer-1a	18488437	18488465	152.00	-8.32
CAediting_1408358	chr20_18488445_-	ENSG00000089050.13	ENST00000337227	hsa-miR-4778-5p	18488441	18488448	8mer-1a	18488441	18488462	153.00	-12.02
CAediting_1408360	chr20_18488448_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3678-3p	18488445	18488452	8mer-1a	18488445	18488466	144.00	-12.82
CAediting_1408360	chr20_18488448_-	ENSG00000089050.13	ENST00000337227	hsa-miR-557	18488443	18488449	7mer-1a	18488443	18488466	144.00	-23.52
CAediting_1408362	chr20_18488461_-	ENSG00000089050.13	ENST00000337227	hsa-miR-370-3p	18488459	18488466	8mer-1a	18488459	18488478	153.00	-27.63
CAediting_1408362	chr20_18488461_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6893-3p	18488459	18488466	8mer-1a	18488459	18488480	160.00	-19.79
CAediting_1408366	chr20_18488475_-	ENSG00000089050.13	ENST00000337227	hsa-miR-10396a-3p	18488470	18488477	8mer-1a	18488470	18488492	158.00	-28.11
CAediting_1408366	chr20_18488475_-	ENSG00000089050.13	ENST00000337227	hsa-miR-10396b-3p	18488470	18488477	8mer-1a	18488470	18488493	158.00	-28.19
CAediting_1408366	chr20_18488475_-	ENSG00000089050.13	ENST00000337227	hsa-miR-4707-5p	18488472	18488478	7mer-m8	18488471	18488493	140.00	-26.12
CAediting_1408369	chr20_18488498_-	ENSG00000089050.13	ENST00000337227	hsa-miR-5699-5p	18488495	18488501	7mer-m8	18488494	18488517	149.00	-16.30
CAediting_1408369	chr20_18488498_-	ENSG00000089050.13	ENST00000337227	hsa-miR-874-5p	18488493	18488500	8mer-1a	18488493	18488515	153.00	-19.75
CAediting_1408371	chr20_18488516_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6849-3p	18488516	18488522	7mer-m8	18488515	18488533	144.00	-19.88
CAediting_1408373	chr20_18488533_-	ENSG00000089050.13	ENST00000337227	hsa-miR-371a-3p	18488528	18488534	7mer-m8	18488527	18488549	144.00	-13.60
CAediting_1408374	chr20_18488538_-	ENSG00000089050.13	ENST00000337227	hsa-miR-139-5p	18488538	18488543	6mer	18488523	18488544	143.00	-20.23
CAediting_1408374	chr20_18488538_-	ENSG00000089050.13	ENST00000337227	hsa-miR-8052	18488533	18488539	7mer-1a	18488533	18488551	148.00	-29.06
CAediting_1408375	chr20_18488539_-	ENSG00000089050.13	ENST00000337227	hsa-miR-513a-5p	18488538	18488544	7mer-m8	18488537	18488554	152.00	-17.32
CAediting_1408375	chr20_18488539_-	ENSG00000089050.13	ENST00000337227	hsa-miR-513a-5p	18488538	18488544	7mer-m8	18488537	18488554	152.00	-17.32
CAediting_1408375	chr20_18488539_-	ENSG00000089050.13	ENST00000337227	hsa-miR-638	18488533	18488539	7mer-1a	18488533	18488557	155.00	-34.38
CAediting_1408376	chr20_18488547_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3622a-5p	18488542	18488548	7mer-m8	18488541	18488562	148.00	-24.75
CAediting_1408313	chr20_18487769_-	ENSG00000089050.13	ENST00000337227	hsa-miR-433-5p	18487768	18487774	7mer-m8	18487767	18487790	167.00	-28.70
CAediting_1408320	chr20_18487817_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6770-3p	18487814	18487820	7mer-m8	18487813	18487834	161.00	-20.90
CAediting_1408320	chr20_18487817_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6770-3p	18487814	18487820	7mer-m8	18487813	18487834	161.00	-20.90
CAediting_1408320	chr20_18487817_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6770-3p	18487814	18487820	7mer-m8	18487813	18487834	161.00	-20.90
CAediting_1408332	chr20_18487898_-	ENSG00000089050.13	ENST00000337227	hsa-miR-4537	18487893	18487900	8mer-1a	18487893	18487914	147.00	-23.19
CAediting_1408335	chr20_18487945_-	ENSG00000089050.13	ENST00000337227	hsa-miR-340-3p	18487944	18487950	7mer-m8	18487943	18487962	149.00	-17.89
CAediting_1408335	chr20_18487945_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6827-3p	18487944	18487950	7mer-m8	18487943	18487963	140.00	-16.10
CAediting_1408336	chr20_18487947_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6890-3p	18487942	18487948	7mer-m8	18487941	18487960	145.00	-13.80
CAediting_1408337	chr20_18488297_-	ENSG00000089050.13	ENST00000337227	hsa-miR-1238-3p	18488294	18488300	7mer-m8	18488293	18488313	157.00	-23.35
CAediting_1408337	chr20_18488297_-	ENSG00000089050.13	ENST00000337227	hsa-miR-4326	18488293	18488299	7mer-m8	18488292	18488315	153.00	-22.23
CAediting_1408338	chr20_18488321_-	ENSG00000089050.13	ENST00000337227	hsa-miR-128-3p	18488321	18488327	7mer-m8	18488320	18488340	152.00	-18.08
CAediting_1408338	chr20_18488321_-	ENSG00000089050.13	ENST00000337227	hsa-miR-128-3p	18488321	18488327	7mer-m8	18488320	18488340	152.00	-18.08
CAediting_1408338	chr20_18488321_-	ENSG00000089050.13	ENST00000337227	hsa-miR-216a-3p	18488321	18488327	7mer-m8	18488320	18488341	146.00	-21.05
CAediting_1408338	chr20_18488321_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3681-3p	18488321	18488327	7mer-m8	18488320	18488342	146.00	-12.60
CAediting_1408340	chr20_18488341_-	ENSG00000089050.13	ENST00000337227	hsa-miR-181a-2-3p	18488341	18488347	7mer-m8	18488340	18488363	148.00	-15.10
CAediting_1408340	chr20_18488341_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3651	18488336	18488342	7mer-m8	18488335	18488357	151.00	-21.18
CAediting_1408342	chr20_18488366_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3136-3p	18488363	18488369	7mer-m8	18488362	18488383	159.00	-16.50
CAediting_1408342	chr20_18488366_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6724-5p	18488361	18488367	7mer-m8	18488360	18488381	154.00	-30.09
CAediting_1408342	chr20_18488366_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6724-5p	18488361	18488367	7mer-m8	18488360	18488381	154.00	-30.09
CAediting_1408342	chr20_18488366_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6724-5p	18488361	18488367	7mer-m8	18488360	18488381	154.00	-30.09
CAediting_1408342	chr20_18488366_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6724-5p	18488361	18488367	7mer-m8	18488360	18488381	154.00	-30.09
CAediting_1408342	chr20_18488366_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6773-5p	18488361	18488367	7mer-m8	18488360	18488380	155.00	-24.59
CAediting_1408342	chr20_18488366_-	ENSG00000089050.13	ENST00000337227	hsa-miR-7155-3p	18488363	18488369	7mer-m8	18488362	18488380	146.00	-19.01
CAediting_1408345	chr20_18488387_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3943	18488383	18488389	7mer-m8	18488382	18488405	142.00	-22.41
CAediting_1408347	chr20_18488412_-	ENSG00000089050.13	ENST00000337227	hsa-miR-933	18488409	18488415	7mer-m8	18488408	18488429	140.00	-19.80
CAediting_1408352	chr20_18488435_-	ENSG00000089050.13	ENST00000337227	hsa-miR-155-5p	18488430	18488436	7mer-m8	18488429	18488455	148.00	-15.83
CAediting_1408354	chr20_18488438_-	ENSG00000089050.13	ENST00000337227	hsa-miR-16-2-3p	18488437	18488444	8mer-1a	18488437	18488457	145.00	-7.16
CAediting_1408354	chr20_18488438_-	ENSG00000089050.13	ENST00000337227	hsa-miR-195-3p	18488437	18488444	8mer-1a	18488437	18488459	141.00	-7.80
CAediting_1408361	chr20_18488459_-	ENSG00000089050.13	ENST00000337227	hsa-miR-1227-5p	18488454	18488460	7mer-m8	18488453	18488469	151.00	-24.46
CAediting_1408361	chr20_18488459_-	ENSG00000089050.13	ENST00000337227	hsa-miR-1915-5p	18488459	18488464	6mer	18488458	18488479	144.00	-26.57
CAediting_1408365	chr20_18488469_-	ENSG00000089050.13	ENST00000337227	hsa-miR-18a-3p	18488469	18488475	7mer-m8	18488468	18488489	145.00	-18.67
CAediting_1408365	chr20_18488469_-	ENSG00000089050.13	ENST00000337227	hsa-miR-5008-3p	18488464	18488470	7mer-m8	18488463	18488487	161.00	-30.17
CAediting_1408365	chr20_18488469_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6737-3p	18488464	18488470	7mer-m8	18488463	18488484	144.00	-17.37
CAediting_1408365	chr20_18488469_-	ENSG00000089050.13	ENST00000337227	hsa-miR-7157-3p	18488464	18488470	7mer-m8	18488463	18488486	151.00	-19.21
CAediting_1408368	chr20_18488484_-	ENSG00000089050.13	ENST00000337227	hsa-miR-5699-5p	18488481	18488487	7mer-m8	18488480	18488502	141.00	-18.22
CAediting_1408368	chr20_18488484_-	ENSG00000089050.13	ENST00000337227	hsa-miR-874-5p	18488479	18488486	8mer-1a	18488479	18488501	165.00	-27.10
CAediting_1408372	chr20_18488522_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3943	18488518	18488524	7mer-m8	18488517	18488539	140.00	-21.87

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1408374	chr20_18488538_-	ENSG00000089050.13	ENST00000337227	hsa-miR-10399-5p	18488537	18488543	7mer-m8	18488536	18488557	144	-10.26
CAediting_1408375	chr20_18488539_-	ENSG00000089050.13	ENST00000337227	hsa-miR-10399-5p	18488537	18488543	7mer-m8	18488536	18488557	144	-10.26
CAediting_1408341	chr20_18488361_-	ENSG00000089050.13	ENST00000337227	hsa-miR-10400-3p	18488361	18488367	7mer-m8	18488360	18488381	141	-24.27
CAediting_1408342	chr20_18488366_-	ENSG00000089050.13	ENST00000337227	hsa-miR-10400-3p	18488361	18488367	7mer-m8	18488360	18488381	141	-24.27
CAediting_1408333	chr20_18487907_-	ENSG00000089050.13	ENST00000337227	hsa-miR-1227-3p	18487905	18487912	8mer-1a	18487905	18487924	148	-21.44
CAediting_1408341	chr20_18488361_-	ENSG00000089050.13	ENST00000337227	hsa-miR-1343-3p	18488358	18488364	7mer-m8	18488357	18488379	150	-26.31
CAediting_1408345	chr20_18488387_-	ENSG00000089050.13	ENST00000337227	hsa-miR-150-5p	18488386	18488392	7mer-m8	18488385	18488408	142	-14.21
CAediting_1408340	chr20_18488341_-	ENSG00000089050.13	ENST00000337227	hsa-miR-181b-2-3p	18488341	18488347	7mer-m8	18488340	18488359	140	-13.85
CAediting_1408340	chr20_18488341_-	ENSG00000089050.13	ENST00000337227	hsa-miR-181b-3p	18488341	18488347	7mer-m8	18488340	18488360	148	-14.53
CAediting_1408361	chr20_18488459_-	ENSG00000089050.13	ENST00000337227	hsa-miR-193a-5p	18488456	18488462	7mer-m8	18488455	18488475	143	-14.8
CAediting_1408362	chr20_18488461_-	ENSG00000089050.13	ENST00000337227	hsa-miR-193a-5p	18488456	18488462	7mer-m8	18488455	18488475	143	-14.8
CAediting_1408333	chr20_18487907_-	ENSG00000089050.13	ENST00000337227	hsa-miR-2113	18487903	18487909	7mer-m8	18487902	18487925	149	-19.72
CAediting_1408337	chr20_18488297_-	ENSG00000089050.13	ENST00000337227	hsa-miR-22-5p	18488293	18488299	7mer-m8	18488292	18488312	141	-12.05
CAediting_1408366	chr20_18488475_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3064-5p	18488474	18488480	7mer-m8	18488473	18488493	143	-14.89
CAediting_1408367	chr20_18488479_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3064-5p	18488474	18488480	7mer-m8	18488473	18488493	143	-14.89
CAediting_1408366	chr20_18488475_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3085-3p	18488474	18488480	7mer-m8	18488473	18488494	146	-18.28
CAediting_1408367	chr20_18488479_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3085-3p	18488474	18488480	7mer-m8	18488473	18488494	146	-18.28
CAediting_1408332	chr20_18487898_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3160-3p	18487893	18487900	8mer-1a	18487893	18487914	154	-18.29
CAediting_1408332	chr20_18487898_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3160-3p	18487893	18487900	8mer-1a	18487893	18487914	154	-18.29
CAediting_1408331	chr20_18487893_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3174	18487891	18487896	6mer	18487890	18487911	145	-21.43
CAediting_1408312	chr20_18487760_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3190-5p	18487759	18487765	7mer-m8	18487758	18487777	147	-18.34
CAediting_1408351	chr20_18488433_-	ENSG00000089050.13	ENST00000337227	hsa-miR-33a-3p	18488430	18488437	8mer-1a	18488430	18488451	143	-3.85
CAediting_1408352	chr20_18488435_-	ENSG00000089050.13	ENST00000337227	hsa-miR-33a-3p	18488430	18488437	8mer-1a	18488430	18488451	143	-3.85
CAediting_1408328	chr20_18487867_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3614-5p	18487863	18487869	7mer-1a	18487863	18487885	153	-24.73
CAediting_1408329	chr20_18487868_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3614-5p	18487863	18487869	7mer-1a	18487863	18487885	153	-24.73
CAediting_1408358	chr20_18488445_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3674	18488444	18488451	8mer-1a	18488444	18488465	140	-9.06
CAediting_1408359	chr20_18488446_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3674	18488444	18488451	8mer-1a	18488444	18488465	140	-9.06
CAediting_1408360	chr20_18488448_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3674	18488444	18488451	8mer-1a	18488444	18488465	140	-9.06
CAediting_1408368	chr20_18488484_-	ENSG00000089050.13	ENST00000337227	hsa-miR-371a-5p	18488483	18488489	7mer-m8	18488482	18488502	145	-14.56
CAediting_1408346	chr20_18488410_-	ENSG00000089050.13	ENST00000337227	hsa-miR-3934-5p	18488406	18488412	7mer-m8	18488405	18488427	151	-19.99
CAediting_1408351	chr20_18488433_-	ENSG00000089050.13	ENST00000337227	hsa-miR-4307	18488432	18488438	7mer-m8	18488431	18488447	142	-6.49
CAediting_1408352	chr20_18488435_-	ENSG00000089050.13	ENST00000337227	hsa-miR-4307	18488432	18488438	7mer-m8	18488431	18488447	142	-6.49
CAediting_1408353	chr20_18488437_-	ENSG00000089050.13	ENST00000337227	hsa-miR-4307	18488432	18488438	7mer-m8	18488431	18488447	142	-6.49
CAediting_1408361	chr20_18488459_-	ENSG00000089050.13	ENST00000337227	hsa-miR-431-5p	18488458	18488464	7mer-m8	18488457	18488478	150	-12.89
CAediting_1408362	chr20_18488461_-	ENSG00000089050.13	ENST00000337227	hsa-miR-431-5p	18488458	18488464	7mer-m8	18488457	18488478	150	-12.89
CAediting_1408342	chr20_18488366_-	ENSG00000089050.13	ENST00000337227	hsa-miR-4437	18488361	18488368	8mer-1a	18488361	18488381	146	-19.59
CAediting_1408341	chr20_18488361_-	ENSG00000089050.13	ENST00000337227	hsa-miR-4674	18488361	18488367	7mer-m8	18488360	18488380	147	-24.54
CAediting_1408342	chr20_18488366_-	ENSG00000089050.13	ENST00000337227	hsa-miR-4674	18488361	18488367	7mer-m8	18488360	18488380	147	-24.54
CAediting_1408370	chr20_18488506_-	ENSG00000089050.13	ENST00000337227	hsa-miR-4703-5p	18488501	18488507	7mer-m8	18488500	18488523	153	-16.79
CAediting_1408373	chr20_18488533_-	ENSG00000089050.13	ENST00000337227	hsa-miR-5089-5p	18488533	18488539	7mer-m8	18488532	18488551	146	-13.24
CAediting_1408374	chr20_18488538_-	ENSG00000089050.13	ENST00000337227	hsa-miR-5089-5p	18488533	18488539	7mer-m8	18488532	18488551	146	-13.24
CAediting_1408373	chr20_18488533_-	ENSG00000089050.13	ENST00000337227	hsa-miR-512-3p	18488528	18488534	7mer-m8	18488527	18488548	149	-13.55
CAediting_1408373	chr20_18488533_-	ENSG00000089050.13	ENST00000337227	hsa-miR-512-3p	18488528	18488534	7mer-m8	18488527	18488548	149	-13.55
CAediting_1408372	chr20_18488522_-	ENSG00000089050.13	ENST00000337227	hsa-miR-532-3p	18488521	18488527	7mer-m8	18488520	18488542	147	-23.59
CAediting_1408321	chr20_18487824_-	ENSG00000089050.13	ENST00000337227	hsa-miR-532-5p	18487823	18487829	7mer-m8	18487822	18487843	155	-18.17
CAediting_1408322	chr20_18487828_-	ENSG00000089050.13	ENST00000337227	hsa-miR-532-5p	18487823	18487829	7mer-m8	18487822	18487843	155	-18.17
CAediting_1408312	chr20_18487760_-	ENSG00000089050.13	ENST00000337227	hsa-miR-548s	18487760	18487766	7mer-m8	18487759	18487783	143	-15.64
CAediting_1408346	chr20_18488410_-	ENSG00000089050.13	ENST00000337227	hsa-miR-552-3p	18488404	18488411	8mer-1a	18488404	18488424	140	-12.81
CAediting_1408331	chr20_18487893_-	ENSG00000089050.13	ENST00000337227	hsa-miR-5586-3p	18487888	18487895	8mer-1a	18487888	18487906	144	-14.79
CAediting_1408321	chr20_18487824_-	ENSG00000089050.13	ENST00000337227	hsa-miR-5589-3p	18487819	18487825	7mer-m8	18487818	18487838	145	-12.85
CAediting_1408339	chr20_18488326_-	ENSG00000089050.13	ENST00000337227	hsa-miR-5693	18488323	18488329	7mer-m8	18488322	18488343	145	-17.3
CAediting_1408315	chr20_18487784_-	ENSG00000089050.13	ENST00000337227	hsa-miR-593-3p	18487780	18487786	7mer-1a	18487780	18487798	140	-19.02
CAediting_1408316	chr20_18487786_-	ENSG00000089050.13	ENST00000337227	hsa-miR-593-3p	18487780	18487786	7mer-1a	18487780	18487798	140	-19.02
CAediting_1408309	chr20_18487722_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6134	18487717	18487724	8mer-1a	18487717	18487735	154	-20.3
CAediting_1408365	chr20_18488469_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6501-5p	18488467	18488473	7mer-1a	18488467	18488488	140	-26.69
CAediting_1408366	chr20_18488475_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6504-5p	18488474	18488480	7mer-m8	18488473	18488493	155	-20.8
CAediting_1408367	chr20_18488479_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6504-5p	18488474	18488480	7mer-m8	18488473	18488493	155	-20.8
CAediting_1408373	chr20_18488533_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6506-5p	18488532	18488538	7mer-m8	18488531	18488553	144	-16.21
CAediting_1408334	chr20_18487918_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6512-3p	18487918	18487924	7mer-m8	18487917	18487938	140	-18.45
CAediting_1408302	chr20_18487689_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6514-3p	18487689	18487695	7mer-m8	18487688	18487708	155	-17.54
CAediting_1408303	chr20_18487693_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6514-3p	18487689	18487695	7mer-m8	18487688	18487708	155	-17.54
CAediting_1408343	chr20_18488377_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6747-3p	18488374	18488381	8mer-1a	18488374	18488395	150	-24.11
CAediting_1408309	chr20_18487722_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6748-5p	18487721	18487727	7mer-m8	18487720	18487739	153	-18.97
CAediting_1408335	chr20_18487945_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6760-3p	18487942	18487948	7mer-m8	18487941	18487961	142	-12.58
CAediting_1408336	chr20_18487947_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6760-3p	18487942	18487948	7mer-m8	18487941	18487961	142	-12.58
CAediting_1408309	chr20_18487722_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6769a-5p	18487720	18487726	7mer-m8	18487719	18487737	142	-19.24
CAediting_1408309	chr20_18487722_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6769b-5p	18487720	18487726	7mer-m8	18487719	18487741	151	-26.8
CAediting_1408372	chr20_18488522_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6778-3p	18488519	18488525	7mer-m8	18488518	18488536	146	-17.35
CAediting_1408345	chr20_18488387_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6778-3p	18488384	18488390	7mer-m8	18488383	18488403	140	-14.63
CAediting_1408341	chr20_18488361_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6783-3p	18488358	18488364	7mer-m8	18488357	18488378	151	-22.63
CAediting_1408376	chr20_18488547_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6807-5p	18488547	18488553	7mer-m8	18488546	18488567	141	-14.47
CAediting_1408315	chr20_18487784_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6818-3p	18487780	18487786	7mer-m8	18487779	18487800	140	-12.56
CAediting_1408360	chr20_18488448_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6832-5p	18488446	18488453	8mer-1a	18488446	18488468	142	-16.29
CAediting_1408301	chr20_18487686_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6847-3p	18487684	18487690	7mer-m8	18487683	18487705	153	-22.19
CAediting_1408302	chr20_18487689_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6847-3p	18487684	18487690	7mer-m8	18487683	18487705	153	-22.19
CAediting_1408348	chr20_18488422_-	ENSG00000089050.13	ENST00000337227	hsa-miR-6872-3p	18488419	18488425	7mer-m8	18488418	18488438	145	-15.42
CAediting_1408375	chr20_18488539_-	ENSG00000089050.13	ENST00000337227	hsa-miR-7151-3p	18488538	18488545	8mer-1a	18488538	18488554	146	-17.62
CAediting_1408308	chr20_18487717_-	ENSG00000089050.13	ENST00000337227	hsa-miR-7160-5p	18487715	18487721	7mer-m8	18487714	18487731	148	-19.34
CAediting_1408308	chr20_18487717_-	ENSG00000089050.13	ENST00000337227	hsa-miR-7162-3p	18487716	18487722	7mer-m8	18487715	18487733	150	-18.37
CAediting_1408364	chr20_18488467_-	ENSG00000089050.13	ENST00000337227	hsa-miR-744-3p	18488467	18488473	7mer-m8	18488466	18488490	154	-19
CAediting_1408365	chr20_18488469_-	ENSG00000089050.13	ENST00000337227	hsa-miR-744-3p	18488467	18488473	7mer-m8	18488466	18488490	154	-19
CAediting_1408334	chr20_18487918_-	ENSG00000089050.13	ENST00000337227	hsa-miR-766-3p	18487917	18487923	7mer-m8	18487916	18487937	145	-19.87
CAediting_1408366	chr20_18488475_-	ENSG00000089050.13	ENST00000337227	hsa-miR-874-3p	18488469	18488476	8mer-1a	18488469	18488490	150	-22.05
CAediting_1408341	chr20_18488361_-	ENSG00000089050.13	ENST00000337227	hsa-miR-939-3p	18488358	18488365	8mer-1a	18488358	18488380	144	-20.66

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1160181	chr17_7017644_-	ENSG00000089050.13	ENST00000337227	hsa-miR-195-3p	18487080	18487086	7mer-m8	18487079	18487101	155	-18.7
CAediting_86358	chr1_109598906_+	ENSG00000089050.13	ENST00000337227	hsa-miR-197-5p	18487722	18487729	8mer-1a	18487722	18487750	146	-28.37
CAediting_117844	chr1_162342605_+	ENSG00000089050.13	ENST00000337227	hsa-miR-556-3p	18488908	18488915	8mer-1a	18488908	18488931	151	-13.45
CAediting_396018	chr5_1062918_-	ENSG00000089050.13	ENST00000337227	hsa-miR-4635	18487733	18487739	7mer-m8	18487732	18487752	158	-21.85
CAediting_442554	chr5_154685830_+	ENSG00000089050.13	ENST00000337227	hsa-miR-1303	18489015	18489022	8mer-1a	18489015	18489036	140	-12.14
CAediting_580943	chr7_100356700_+	ENSG00000089050.13	ENST00000337227	hsa-miR-6840-3p	18487872	18487878	7mer-m8	18487871	18487889	151	-29.65
CAediting_524911	chr7_5495852_-	ENSG00000089050.13	ENST00000337227	hsa-miR-589-3p	18487932	18487938	7mer-m8	18487931	18487955	158	-15.58
CAediting_1524209	chrX_134546392_-	ENSG00000089050.13	ENST00000337227	hsa-miR-503-5p	18487246	18487252	7mer-1a	18487246	18487272	143	-27.64

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_86358	chr1_109598906_+	ENSG00000089050.13	ENST00000337227	hsa-miR-197-5p	18489512	18489517	6mer	18489501	18489524	152	-31.07
CAediting_393	chr1_1167164_+	ENSG00000089050.13	ENST00000337227	hsa-miR-200b-3p	18489553	18489559	7mer-m8	18489552	18489571	154	-12.05
CAediting_1229413	chr17_67471544_+	ENSG00000089050.13	ENST00000337227	hsa-miR-548aa	18488069	18488075	7mer-m8	18488068	18488089	155	-13.6
CAediting_1229415	chr17_67471547_+	ENSG00000089050.13	ENST00000337227	hsa-miR-548aa	18488069	18488075	7mer-m8	18488068	18488089	155	-13.6
CAediting_1229413	chr17_67471544_+	ENSG00000089050.13	ENST00000337227	hsa-miR-548aa	18489435	18489441	7mer-1a	18489435	18489458	141	-8.49
CAediting_1229415	chr17_67471547_+	ENSG00000089050.13	ENST00000337227	hsa-miR-548aa	18489435	18489441	7mer-1a	18489435	18489458	141	-8.49
CAediting_524911	chr7_5495852_-	ENSG00000089050.13	ENST00000337227	hsa-miR-589-3p	18488665	18488671	7mer-m8	18488664	18488687	140	-10.85
CAediting_580943	chr7_100356700_+	ENSG00000089050.13	ENST00000337227	hsa-miR-6840-3p	18488309	18488315	7mer-m8	18488308	18488329	152	-26.94

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for RBBP9

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for RBBP9

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BLCA	CAediting_1408304	chr20_18487695_-	1.05968584088164e-23	0.508592212703013	.	.	.	.
LGG	CAediting_1408304	chr20_18487695_-	1.74247334434775e-15	0.346068420943782	.	.	.	.
BRCA	CAediting_1408304	chr20_18487695_-	8.23914207086157e-73	0.514449834573089	.	.	.	.
LIHC	CAediting_1408304	chr20_18487695_-	0.000489302163097304	0.194412626087955	.	.	.	.
CESC	CAediting_1408304	chr20_18487695_-	1.39415808470811e-17	0.48512894275847	.	.	.	.
LUAD	CAediting_1408304	chr20_18487695_-	6.6147873102987e-21	0.409426208774471	.	.	.	.
COAD	CAediting_1408304	chr20_18487695_-	8.46259961557386e-11	0.350013021818838	.	.	.	.
LUSC	CAediting_1408304	chr20_18487695_-	3.68760909971087e-20	0.409620593063293	.	.	.	.
GBM	CAediting_1408304	chr20_18487695_-	7.75670428462258e-08	0.405705005273502	.	.	.	.
PRAD	CAediting_1408304	chr20_18487695_-	6.30381315439772e-15	0.359448969534693	.	.	.	.
HNSC	CAediting_1408304	chr20_18487695_-	7.74853131865992e-17	0.382775539497218	0.000106192974853011	0.183521773387734	.	.
STAD	CAediting_1408304	chr20_18487695_-	3.09622271320114e-08	0.298015180531383	.	.	.	.
KICH	CAediting_1408304	chr20_18487695_-	0.000925740959885054	0.430539577875013	.	.	.	.
THCA	CAediting_1408304	chr20_18487695_-	1.5608431264326e-19	0.386373329006267	.	.	.	.
KIRC	CAediting_1408304	chr20_18487695_-	3.75377112992956e-17	0.358144663560057	.	.	.	.
UCEC	CAediting_1408304	chr20_18487695_-	9.92011231106576e-25	0.456755402201018	.	.	.	.
ACC	CAediting_1408304	chr20_18487695_-	1.12231095434939e-05	0.495377155514309	.	.	.	.
ESCA	CAediting_1408304	chr20_18487695_-	0.000171107778240149	0.292870141809275	.	.	.	.
OV	CAediting_1408304	chr20_18487695_-	4.08017355562469e-11	0.335240492763689	.	.	.	.
PAAD	CAediting_1408304	chr20_18487695_-	2.49539111096944e-06	0.366713882132709	.	.	.	.
PCPG	CAediting_1408304	chr20_18487695_-	5.22944852870754e-09	0.459895300388854	.	.	.	.
SKCM	CAediting_1408304	chr20_18487695_-	3.48687465555191e-30	0.537330042951017	.	.	.	.
READ	CAediting_1408304	chr20_18487695_-	0.0209137640536859	0.210664169574566	.	.	.	.
SARC	CAediting_1408304	chr20_18487695_-	4.02172987373197e-14	0.505711450692047	.	.	.	.
TGCT	CAediting_1408304	chr20_18487695_-	2.07289140945345e-10	0.496817005816958	.	.	.	.
THYM	CAediting_1408304	chr20_18487695_-	1.17866744728225e-08	0.52356101115026	.	.	.	.
BLCA	CAediting_1408305	chr20_18487707_-	7.36407122582182e-09	0.352825441119204	.	.	.	.
LGG	CAediting_1408305	chr20_18487707_-	8.21467382277764e-05	0.206605023320188	.	.	.	.
BRCA	CAediting_1408305	chr20_18487707_-	7.81079906793741e-40	0.411481826405595	.	.	.	.
CESC	CAediting_1408305	chr20_18487707_-	8.57155700819841e-06	0.288748369016235	.	.	.	.
LUAD	CAediting_1408305	chr20_18487707_-	3.8446869068903e-10	0.312450306857714	.	.	.	.
COAD	CAediting_1408305	chr20_18487707_-	1.88729119969781e-08	0.357237356029543	.	.	.	.
LUSC	CAediting_1408305	chr20_18487707_-	3.26741376003587e-07	0.261416600067549	.	.	.	.
GBM	CAediting_1408305	chr20_18487707_-	0.000378196925171899	0.288417513356245	.	.	.	.
PRAD	CAediting_1408305	chr20_18487707_-	1.41501648951362e-08	0.28874199735346	.	.	.	.
HNSC	CAediting_1408305	chr20_18487707_-	1.27807220571309e-08	0.300695786413195	0.0226988633950524	0.122828184836031	.	.
STAD	CAediting_1408305	chr20_18487707_-	1.03342212107891e-05	0.243755176836368	.	.	.	.
THCA	CAediting_1408305	chr20_18487707_-	1.64956733286333e-09	0.264925961980339	.	.	.	.
KIRC	CAediting_1408305	chr20_18487707_-	4.13435104392287e-05	0.182088704520927	.	.	.	.
UCEC	CAediting_1408305	chr20_18487707_-	1.15967653825557e-07	0.266416391607235	.	.	.	.
ACC	CAediting_1408305	chr20_18487707_-	0.000384902562930575	0.433627341944434	.	.	.	.
ESCA	CAediting_1408305	chr20_18487707_-	4.00560279760833e-06	0.366383076490004	.	.	.	.
OV	CAediting_1408305	chr20_18487707_-	6.96733498363658e-11	0.335337320057111	.	.	.	.
PAAD	CAediting_1408305	chr20_18487707_-	0.0187361664713747	0.228011197187936	.	.	.	.
PCPG	CAediting_1408305	chr20_18487707_-	0.00574548245954345	0.295473115844088	.	.	.	.
SKCM	CAediting_1408305	chr20_18487707_-	3.07037419572958e-08	0.326222848705079	.	.	.	.
SARC	CAediting_1408305	chr20_18487707_-	1.97638737181697e-08	0.457040415818574	.	.	.	.
TGCT	CAediting_1408305	chr20_18487707_-	1.6068900053031e-12	0.565515927214979	.	.	.	.
THYM	CAediting_1408305	chr20_18487707_-	0.000845749571087489	0.355358495845749	.	.	.	.
BRCA	CAediting_1408306	chr20_18487708_-	0.0361171294453378	0.111427249548932	.	.	.	.
LIHC	CAediting_1408306	chr20_18487708_-	0.00747235369274245	0.252629617470618	.	.	.	.
LUAD	CAediting_1408306	chr20_18487708_-	0.000559627580801456	0.325212171353597	.	.	.	.
GBM	CAediting_1408306	chr20_18487708_-	0.0172640196216066	0.308969055235537	.	.	.	.
LIHC	CAediting_1408308	chr20_18487717_-	.	.	.	.	0.000169818530364251	0.459851529141084
OV	CAediting_1408313	chr20_18487769_-	0.00203790193846979	0.237769040197043	.	.	.	.
BLCA	CAediting_1408321	chr20_18487824_-	0.000155712613993823	0.288560129578662	.	.	.	.
LGG	CAediting_1408321	chr20_18487824_-	4.9163784122074e-10	0.318664117393252	.	.	.	.
BRCA	CAediting_1408321	chr20_18487824_-	1.09774685135048e-39	0.445515541805612	.	.	.	.
LIHC	CAediting_1408321	chr20_18487824_-	8.86996343154107e-08	0.303754079877788	.	.	.	.
CESC	CAediting_1408321	chr20_18487824_-	0.00306624287348148	0.232691529437631	.	.	.	.
LUAD	CAediting_1408321	chr20_18487824_-	1.32130578859428e-13	0.38986320120226	.	.	.	.
LUSC	CAediting_1408321	chr20_18487824_-	4.96245566216632e-10	0.421788529755587	.	.	.	.
GBM	CAediting_1408321	chr20_18487824_-	7.70039387455864e-08	0.458267837407385	.	.	.	.
PRAD	CAediting_1408321	chr20_18487824_-	0.000889941237986643	0.236720706258824	.	.	.	.
HNSC	CAediting_1408321	chr20_18487824_-	2.59021170079457e-05	0.297845078678069	.	.	.	.
STAD	CAediting_1408321	chr20_18487824_-	2.71131603252319e-08	0.33266154054462	.	.	.	.
THCA	CAediting_1408321	chr20_18487824_-	1.38230846468833e-08	0.284906950318909	.	.	.	.
KIRC	CAediting_1408321	chr20_18487824_-	3.68898899142571e-07	0.243339802846873	.	.	.	.
UCEC	CAediting_1408321	chr20_18487824_-	1.22679997323832e-07	0.294904815122649	0.0312952779556134	0.122333593144949	.	.
ESCA	CAediting_1408321	chr20_18487824_-	0.0445962558570483	0.171262463522084	.	.	.	.
OV	CAediting_1408321	chr20_18487824_-	2.04473150025926e-12	0.373795536801194	.	.	.	.
PAAD	CAediting_1408321	chr20_18487824_-	0.000140102421372017	0.369976832902946	.	.	.	.
PCPG	CAediting_1408321	chr20_18487824_-	0.0425026706835724	0.192047653210018	.	.	.	.
SARC	CAediting_1408321	chr20_18487824_-	3.95702132341649e-05	0.382962726280123	.	.	.	.
TGCT	CAediting_1408321	chr20_18487824_-	2.72193637765035e-06	0.476311058282604	.	.	.	.
THYM	CAediting_1408321	chr20_18487824_-	5.08618968597796e-05	0.461584973979071	.	.	.	.
BLCA	CAediting_1408322	chr20_18487828_-	3.70116107917635e-05	0.276798916256422	.	.	.	.
LGG	CAediting_1408322	chr20_18487828_-	2.00772380077905e-05	0.243485389524553	.	.	.	.
BRCA	CAediting_1408322	chr20_18487828_-	6.79217847567891e-16	0.275724204993089	.	.	.	.
LIHC	CAediting_1408322	chr20_18487828_-	0.000502599618418211	0.197425342739813	.	.	.	.
CESC	CAediting_1408322	chr20_18487828_-	0.0441099408229883	0.149407598592167	.	.	.	.
LUAD	CAediting_1408322	chr20_18487828_-	1.05584099932006e-07	0.280678040678305	.	.	.	.
LUSC	CAediting_1408322	chr20_18487828_-	7.70962135990647e-06	0.279217607021848	.	.	.	.
GBM	CAediting_1408322	chr20_18487828_-	0.0024813987805227	0.286986753048224	.	.	.	.
THCA	CAediting_1408322	chr20_18487828_-	8.67881002289434e-07	0.236763978847574	.	.	.	.
KIRC	CAediting_1408322	chr20_18487828_-	0.00034047459276825	0.169640345999297	.	.	.	.
ACC	CAediting_1408322	chr20_18487828_-	7.35549801444934e-09	0.710737690153607	.	.	.	.
SKCM	CAediting_1408322	chr20_18487828_-	0.00157715618040517	0.231372903473213	.	.	.	.
SARC	CAediting_1408322	chr20_18487828_-	0.00679741325578682	0.224618766199323	.	.	.	.
TGCT	CAediting_1408322	chr20_18487828_-	0.000202434637228322	0.359957881852399	.	.	.	.
LGG	CAediting_1408323	chr20_18487829_-	0.000111646353940101	0.31856767286074	.	.	.	.
BRCA	CAediting_1408323	chr20_18487829_-	7.13707583846813e-15	0.313978320211078	.	.	.	.
LIHC	CAediting_1408323	chr20_18487829_-	0.00681705578660566	0.168387930411733	.	.	.	.
LUAD	CAediting_1408323	chr20_18487829_-	3.00028831812895e-07	0.343163602032138	.	.	.	.
LUSC	CAediting_1408323	chr20_18487829_-	8.33164767193851e-10	0.573396793943116	.	.	.	.
THCA	CAediting_1408323	chr20_18487829_-	0.000154448842398169	0.256422711566386	.	.	.	.
KIRC	CAediting_1408323	chr20_18487829_-	0.00126020500259081	0.182945860623919	.	.	.	.
UCEC	CAediting_1408323	chr20_18487829_-	.	.	.	.	0.0369614878080909	0.15147323077824
PCPG	CAediting_1408323	chr20_18487829_-	0.0401614883264505	0.275110051826297	.	.	.	.
SARC	CAediting_1408323	chr20_18487829_-	0.00404591012607574	0.346742969552565	.	.	.	.
TGCT	CAediting_1408323	chr20_18487829_-	0.00288088780913914	0.372348335046741	.	.	.	.
BLCA	CAediting_1408324	chr20_18487830_-	0.0392939385090978	0.151275798503308	.	.	.	.
LGG	CAediting_1408324	chr20_18487830_-	5.8944095044709e-10	0.330545148017459	0.0403154368984708	0.1122644568424	.	.
BRCA	CAediting_1408324	chr20_18487830_-	1.88459398070074e-43	0.448765614468585	.	.	.	.
LIHC	CAediting_1408324	chr20_18487830_-	3.63845086168238e-09	0.332815088789352	.	.	.	.
CESC	CAediting_1408324	chr20_18487830_-	0.0164863940304895	0.193613760651028	.	.	.	.
LUAD	CAediting_1408324	chr20_18487830_-	1.21357274513989e-12	0.36715924778255	.	.	.	.
LUSC	CAediting_1408324	chr20_18487830_-	2.6902202168395e-08	0.357945715985874	.	.	.	.
GBM	CAediting_1408324	chr20_18487830_-	0.000337521872467395	0.356550048955469	.	.	.	.
PRAD	CAediting_1408324	chr20_18487830_-	0.0127480542375227	0.157648652202444	.	.	.	.
HNSC	CAediting_1408324	chr20_18487830_-	0.00554908214346651	0.192122134384417	.	.	.	.
STAD	CAediting_1408324	chr20_18487830_-	0.00785051679387853	0.179617685345739	.	.	.	.
THCA	CAediting_1408324	chr20_18487830_-	1.54685207443101e-09	0.306983281057386	.	.	.	.
KIRC	CAediting_1408324	chr20_18487830_-	2.61001197271905e-08	0.260022187720465	.	.	.	.
UCEC	CAediting_1408324	chr20_18487830_-	1.04478185547541e-05	0.25957697279967	0.00541977331931593	0.165490666262987	.	.
ESCA	CAediting_1408324	chr20_18487830_-	0.00769155032922105	0.263777947929851	.	.	.	.
OV	CAediting_1408324	chr20_18487830_-	6.91496616619515e-06	0.266460677599679	.	.	.	.
SKCM	CAediting_1408324	chr20_18487830_-	0.0235185674664116	0.154797856487702	.	.	.	.
SARC	CAediting_1408324	chr20_18487830_-	6.76208226782385e-08	0.450366768878411	.	.	.	.
TGCT	CAediting_1408324	chr20_18487830_-	5.66031277227059e-08	0.522343807267042	.	.	.	.
THYM	CAediting_1408324	chr20_18487830_-	0.0253697569079227	0.254732220635799	.	.	.	.
BRCA	CAediting_1408327	chr20_18487840_-	0.0177142024503831	0.233287761507265	.	.	.	.
LIHC	CAediting_1408327	chr20_18487840_-	0.00143425449955835	0.30720329080386	.	.	.	.
BLCA	CAediting_1408328	chr20_18487867_-	4.05983561971615e-24	0.485637536023666	.	.	.	.
LGG	CAediting_1408328	chr20_18487867_-	3.99273206799933e-08	0.237022428455636	.	.	.	.
BRCA	CAediting_1408328	chr20_18487867_-	4.54465796439927e-91	0.561257535862194	.	.	.	.
LIHC	CAediting_1408328	chr20_18487867_-	2.09554227633242e-08	0.293547237419185	.	.	.	.
CESC	CAediting_1408328	chr20_18487867_-	2.69110026296976e-14	0.42069337454577	.	.	.	.
LUAD	CAediting_1408328	chr20_18487867_-	8.06423217067886e-23	0.416891167140779	.	.	.	.
COAD	CAediting_1408328	chr20_18487867_-	2.63466890012292e-06	0.229584055309617	.	.	.	.
LUSC	CAediting_1408328	chr20_18487867_-	2.21346387824097e-24	0.4355680749142	.	.	.	.
GBM	CAediting_1408328	chr20_18487867_-	5.14296793175089e-08	0.407317011820415	.	.	.	.
PRAD	CAediting_1408328	chr20_18487867_-	1.73544926982494e-14	0.338750429356958	.	.	.	.
HNSC	CAediting_1408328	chr20_18487867_-	3.58097409826515e-24	0.439818751214337	.	.	.	.
STAD	CAediting_1408328	chr20_18487867_-	1.34627061787244e-14	0.390484409688307	.	.	.	.
THCA	CAediting_1408328	chr20_18487867_-	1.18876569225764e-16	0.356629273485392	.	.	.	.
KIRC	CAediting_1408328	chr20_18487867_-	6.04046388949208e-16	0.341833620919798	.	.	.	.
UCEC	CAediting_1408328	chr20_18487867_-	3.97472219886783e-21	0.402123616932807	.	.	.	.
ACC	CAediting_1408328	chr20_18487867_-	2.60823964395292e-06	0.506459957762412	.	.	.	.
ESCA	CAediting_1408328	chr20_18487867_-	1.69108807157691e-05	0.330998349637762	.	.	.	.
OV	CAediting_1408328	chr20_18487867_-	1.96601078421334e-11	0.339062939220749	.	.	.	.
PAAD	CAediting_1408328	chr20_18487867_-	4.25273464551713e-05	0.302572091563304	.	.	.	.
PCPG	CAediting_1408328	chr20_18487867_-	1.24161281139801e-07	0.392053754950506	0.0488427521959224	0.151334362388298	.	.
SKCM	CAediting_1408328	chr20_18487867_-	2.28830589100408e-22	0.438794017686608	.	.	.	.
UCS	CAediting_1408328	chr20_18487867_-	0.00467064314529714	0.386333799964223	.	.	.	.
MESO	CAediting_1408328	chr20_18487867_-	0.000637271931172497	0.385473921139517	.	.	.	.
SARC	CAediting_1408328	chr20_18487867_-	1.13096770815865e-17	0.506191657204118	.	.	.	.
TGCT	CAediting_1408328	chr20_18487867_-	9.84409809510804e-13	0.532579808623232	.	.	.	.
THYM	CAediting_1408328	chr20_18487867_-	2.33330542266841e-07	0.46171252483235	.	.	.	.
BLCA	CAediting_1408329	chr20_18487868_-	0.00887695267109161	0.206260650384786	.	.	.	.
LGG	CAediting_1408329	chr20_18487868_-	6.10650488160173e-09	0.298373140983763	.	.	.	.
BRCA	CAediting_1408329	chr20_18487868_-	1.00318282617132e-41	0.447015938990824	.	.	.	.
LIHC	CAediting_1408329	chr20_18487868_-	5.23191647409502e-06	0.254649396062678	.	.	.	.
CESC	CAediting_1408329	chr20_18487868_-	0.00527715046655544	0.230530939633933	.	.	.	.
LUAD	CAediting_1408329	chr20_18487868_-	5.57779103405358e-12	0.364248707491148	.	.	.	.
LUSC	CAediting_1408329	chr20_18487868_-	1.06169591581287e-07	0.364260022839014	.	.	.	.
GBM	CAediting_1408329	chr20_18487868_-	0.0178769343762003	0.257864821149138	.	.	.	.
PRAD	CAediting_1408329	chr20_18487868_-	0.000963721343122653	0.238842609294397	.	.	.	.
HNSC	CAediting_1408329	chr20_18487868_-	0.00044060555314876	0.255136496920637	.	.	.	.
STAD	CAediting_1408329	chr20_18487868_-	0.00931374801175755	0.20249157509427	.	.	.	.
THCA	CAediting_1408329	chr20_18487868_-	4.18167404704576e-08	0.278811039895959	.	.	.	.
KIRC	CAediting_1408329	chr20_18487868_-	2.0032379700788e-08	0.263825283385736	.	.	.	.
UCEC	CAediting_1408329	chr20_18487868_-	0.000981347850732211	0.202471580660729	.	.	.	.
ESCA	CAediting_1408329	chr20_18487868_-	0.00168088500601211	0.373970036535705	.	.	.	.
PCPG	CAediting_1408329	chr20_18487868_-	0.00184951762974116	0.278007851302166	.	.	.	.
SARC	CAediting_1408329	chr20_18487868_-	4.85835363362071e-05	0.356366465082793	.	.	.	.
TGCT	CAediting_1408329	chr20_18487868_-	0.00148173568490472	0.321627910846547	.	.	.	.
THYM	CAediting_1408329	chr20_18487868_-	0.000254839621265362	0.418393140900764	.	.	.	.
BRCA	CAediting_1408331	chr20_18487893_-	0.000439345535118353	0.216049911453662	.	.	.	.
THCA	CAediting_1408331	chr20_18487893_-	0.0321753089184012	0.300451379422354	.	.	.	.
KIRC	CAediting_1408331	chr20_18487893_-	0.000735376366983533	0.317163136579006	.	.	.	.
LIHC	CAediting_1408333	chr20_18487907_-	0.00490364261142856	0.38083775973907	.	.	.	.
BRCA	CAediting_1408341	chr20_18488361_-	0.0238853352209169	0.21531102135893	.	.	.	.
BLCA	CAediting_1408346	chr20_18488410_-	0.00129652623657991	0.271145582981606	.	.	.	.
LGG	CAediting_1408346	chr20_18488410_-	0.02408762817623	0.128521154654677	.	.	.	.
BRCA	CAediting_1408346	chr20_18488410_-	5.65930547590765e-28	0.377603223253147	.	.	.	.
CESC	CAediting_1408346	chr20_18488410_-	1.10123314353525e-06	0.399552343257219	.	.	.	.
LUAD	CAediting_1408346	chr20_18488410_-	1.80792293916803e-05	0.245983348665071	.	.	.	.
COAD	CAediting_1408346	chr20_18488410_-	0.00396458858275915	0.277594009498852	.	.	.	.
LUSC	CAediting_1408346	chr20_18488410_-	1.88337564569505e-07	0.328661991273219	.	.	.	.
GBM	CAediting_1408346	chr20_18488410_-	7.70886555009528e-05	0.331202372306782	.	.	.	.
HNSC	CAediting_1408346	chr20_18488410_-	4.61231176301447e-05	0.297212772458698	.	.	.	.
STAD	CAediting_1408346	chr20_18488410_-	2.08285460121815e-05	0.255402776438425	.	.	.	.
THCA	CAediting_1408346	chr20_18488410_-	1.27594276698152e-06	0.239685042219726	.	.	.	.
KIRC	CAediting_1408346	chr20_18488410_-	0.000245614857457473	0.174360342976131	.	.	.	.
ESCA	CAediting_1408346	chr20_18488410_-	0.00712606937064484	0.232321656258763	.	.	.	.
OV	CAediting_1408346	chr20_18488410_-	1.18318807074451e-07	0.290339029233017	.	.	.	.
SARC	CAediting_1408346	chr20_18488410_-	4.02953347889794e-06	0.473990873768912	.	.	.	.
TGCT	CAediting_1408346	chr20_18488410_-	9.49446671840939e-08	0.532176209235334	.	.	.	.
THYM	CAediting_1408346	chr20_18488410_-	0.0410785639888919	0.266808206373877	.	.	.	.
LGG	CAediting_1408350	chr20_18488430_-	.	.	0.0184165928901124	0.332222525430199	.	.
KIRC	CAediting_1408350	chr20_18488430_-	.	.	.	.	0.0149698850990011	0.32363408456103
BRCA	CAediting_1408356	chr20_18488443_-	0.0362619902686076	0.0749910908755928	.	.	.	.
CESC	CAediting_1408356	chr20_18488443_-	0.0195334645053151	0.188637776434604	.	.	.	.
PRAD	CAediting_1408356	chr20_18488443_-	0.025757811072113	0.154985684794928	.	.	.	.
STAD	CAediting_1408356	chr20_18488443_-	0.00237300214489913	0.180928044729873	.	.	.	.
THCA	CAediting_1408356	chr20_18488443_-	0.00762085345318772	0.128522750110276	.	.	.	.
BLCA	CAediting_1408358	chr20_18488445_-	0.0158326260054662	0.241948967395126	.	.	0.00273451849873702	0.298030602019261
BRCA	CAediting_1408358	chr20_18488445_-	4.7513529459095e-18	0.312129354575877	.	.	0.0175084479552289	0.0876748300785314
LIHC	CAediting_1408358	chr20_18488445_-	0.000138732226889937	0.288975385824989	.	.	.	.
CESC	CAediting_1408358	chr20_18488445_-	0.0445408673130774	0.215958424587976	.	.	.	.
LUAD	CAediting_1408358	chr20_18488445_-	0.000110136186721887	0.251693830491235	.	.	.	.
LUSC	CAediting_1408358	chr20_18488445_-	0.000110216200812	0.30278700885123	.	.	.	.
GBM	CAediting_1408358	chr20_18488445_-	0.00170374704251973	0.301205758843265	.	.	.	.
PRAD	CAediting_1408358	chr20_18488445_-	.	.	0.0448917555125443	0.197120137520995	.	.
THCA	CAediting_1408358	chr20_18488445_-	0.00156286802120927	0.180645696817921	.	.	.	.
KIRC	CAediting_1408358	chr20_18488445_-	0.0136735197604396	0.133811409852488	.	.	.	.
OV	CAediting_1408358	chr20_18488445_-	0.00302303729866599	0.192652337067148	.	.	.	.
SKCM	CAediting_1408358	chr20_18488445_-	.	.	0.02303172639267	0.204027488019467	.	.
SARC	CAediting_1408358	chr20_18488445_-	0.000360809816285718	0.467845228107223	.	.	.	.
TGCT	CAediting_1408358	chr20_18488445_-	0.00495839141574529	0.36410493512201	.	.	.	.
BLCA	CAediting_1408363	chr20_18488465_-	0.000814458059964842	0.352433175815831	.	.	.	.
LGG	CAediting_1408363	chr20_18488465_-	1.13958484856819e-08	0.40137400306433	.	.	.	.
BRCA	CAediting_1408363	chr20_18488465_-	5.71889656013377e-30	0.42286775028169	.	.	.	.
LIHC	CAediting_1408363	chr20_18488465_-	0.000327631788904929	0.236354388611134	.	.	.	.
CESC	CAediting_1408363	chr20_18488465_-	0.0398581174443482	0.217082619883477	.	.	.	.
LUAD	CAediting_1408363	chr20_18488465_-	7.8838193830715e-08	0.333528553742741	.	.	.	.
LUSC	CAediting_1408363	chr20_18488465_-	6.114132861725e-06	0.398131768274006	.	.	.	.
GBM	CAediting_1408363	chr20_18488465_-	0.00062618633630109	0.45464619483781	.	.	.	.
PRAD	CAediting_1408363	chr20_18488465_-	0.0091115497217128	0.269053303835911	.	.	.	.
HNSC	CAediting_1408363	chr20_18488465_-	0.014592458039196	0.253915077914686	.	.	.	.
STAD	CAediting_1408363	chr20_18488465_-	1.91616439108978e-06	0.376316823628561	.	.	.	.
THCA	CAediting_1408363	chr20_18488465_-	2.38505904826353e-08	0.375045487023663	.	.	.	.
KIRC	CAediting_1408363	chr20_18488465_-	0.000448789133939571	0.186349592446429	.	.	.	.
UCEC	CAediting_1408363	chr20_18488465_-	.	.	0.00192465917355694	0.288745027781526	.	.
KIRP	CAediting_1408363	chr20_18488465_-	0.0296861820619999	0.244789526645951	.	.	.	.
ESCA	CAediting_1408363	chr20_18488465_-	0.00939250832544423	0.341204998420896	.	.	.	.
OV	CAediting_1408363	chr20_18488465_-	1.20203829511879e-06	0.31910816338192	.	.	.	.
TGCT	CAediting_1408363	chr20_18488465_-	0.000136460773018224	0.472787128853809	.	.	.	.
BLCA	CAediting_1408369	chr20_18488498_-	0.00384671628523709	0.226595477245205	.	.	.	.
LGG	CAediting_1408369	chr20_18488498_-	0.0015920803593442	0.195992109149264	.	.	.	.
BRCA	CAediting_1408369	chr20_18488498_-	3.56242925889081e-43	0.452940655233691	.	.	.	.
LIHC	CAediting_1408369	chr20_18488498_-	2.26362090434843e-05	0.246457673533217	.	.	.	.
CESC	CAediting_1408369	chr20_18488498_-	2.67261015721756e-06	0.381006677731977	.	.	.	.
LUAD	CAediting_1408369	chr20_18488498_-	9.14842518332643e-08	0.282784697946518	.	.	.	.
LUSC	CAediting_1408369	chr20_18488498_-	0.00195878890082992	0.220422008343756	.	.	.	.
GBM	CAediting_1408369	chr20_18488498_-	0.000537496322477473	0.355814560274672	.	.	.	.
PRAD	CAediting_1408369	chr20_18488498_-	2.31934342255906e-05	0.290915700046678	.	.	.	.
HNSC	CAediting_1408369	chr20_18488498_-	0.00230029095325143	0.21178716640626	.	.	.	.
STAD	CAediting_1408369	chr20_18488498_-	0.000308072523590508	0.25573779497176	.	.	.	.
THCA	CAediting_1408369	chr20_18488498_-	0.000521102375391434	0.18856959939473	.	.	.	.
KIRC	CAediting_1408369	chr20_18488498_-	2.45071433078478e-05	0.199909463452442	.	.	.	.
UCEC	CAediting_1408369	chr20_18488498_-	0.0205124619230832	0.166684163739289	.	.	.	.
ESCA	CAediting_1408369	chr20_18488498_-	7.23994365587661e-05	0.416827324292476	.	.	.	.
OV	CAediting_1408369	chr20_18488498_-	5.51205249670379e-06	0.293342238946986	.	.	.	.
SKCM	CAediting_1408369	chr20_18488498_-	0.0052696025302379	0.206574077786448	.	.	.	.
SARC	CAediting_1408369	chr20_18488498_-	0.000353502437061811	0.394355462132494	.	.	.	.
TGCT	CAediting_1408369	chr20_18488498_-	2.95587588052557e-05	0.425141781444719	.	.	.	.
BLCA	CAediting_1408373	chr20_18488533_-	0.00526225262322469	0.273045746516075	.	.	.	.
LGG	CAediting_1408373	chr20_18488533_-	0.00109995565531406	0.229698200066673	.	.	.	.
BRCA	CAediting_1408373	chr20_18488533_-	3.75321088490735e-34	0.438426578153004	.	.	.	.
LIHC	CAediting_1408373	chr20_18488533_-	0.00429044263672805	0.181500149963943	.	.	.	.
CESC	CAediting_1408373	chr20_18488533_-	0.000402853742052244	0.34382788339949	.	.	.	.
LUAD	CAediting_1408373	chr20_18488533_-	2.61069778029335e-11	0.390595656406847	.	.	.	.
GBM	CAediting_1408373	chr20_18488533_-	6.20004878078768e-07	0.529527715145089	.	.	.	.
PRAD	CAediting_1408373	chr20_18488533_-	0.040304714970243	0.159827293157419	.	.	.	.
STAD	CAediting_1408373	chr20_18488533_-	5.81474431582059e-05	0.321120535138056	.	.	.	.
THCA	CAediting_1408373	chr20_18488533_-	1.33406630894154e-08	0.306819731542514	.	.	.	.
KIRC	CAediting_1408373	chr20_18488533_-	0.000544013466962367	0.170676880074067	.	.	.	.
UCEC	CAediting_1408373	chr20_18488533_-	0.0220875601940541	0.205428750318939	.	.	.	.
ESCA	CAediting_1408373	chr20_18488533_-	0.0184983177428878	0.296007250551185	.	.	.	.
OV	CAediting_1408373	chr20_18488533_-	2.93188469301367e-05	0.292305649394232	.	.	.	.
SKCM	CAediting_1408373	chr20_18488533_-	0.0288105278197424	0.197992020789029	.	.	.	.
TGCT	CAediting_1408373	chr20_18488533_-	1.24615547109305e-07	0.578746355654716	.	.	.	.
BLCA	CAediting_1408374	chr20_18488538_-	1.05632547666506e-09	0.368173373964632	.	.	.	.
LGG	CAediting_1408374	chr20_18488538_-	1.98896364867638e-10	0.298245386814496	.	.	.	.
BRCA	CAediting_1408374	chr20_18488538_-	1.86056866105726e-85	0.562138507899655	.	.	.	.
LIHC	CAediting_1408374	chr20_18488538_-	3.01245568852519e-05	0.243638036977206	.	.	.	.
CESC	CAediting_1408374	chr20_18488538_-	3.17964743895703e-14	0.480486920537277	.	.	.	.
LUAD	CAediting_1408374	chr20_18488538_-	2.71898784724245e-18	0.392603108034222	.	.	.	.
COAD	CAediting_1408374	chr20_18488538_-	1.93029543795832e-09	0.359460799115115	.	.	.	.
LUSC	CAediting_1408374	chr20_18488538_-	1.63963541669458e-14	0.367334009157852	.	.	.	.
GBM	CAediting_1408374	chr20_18488538_-	0.000615632002665236	0.272929973098457	.	.	.	.
PRAD	CAediting_1408374	chr20_18488538_-	3.2614055433639e-09	0.299169150595588	.	.	.	.
HNSC	CAediting_1408374	chr20_18488538_-	2.50929986763747e-10	0.310232333079727	0.0201405205814449	0.116447286555059	.	.
STAD	CAediting_1408374	chr20_18488538_-	8.18134718704941e-13	0.384372102872617	.	.	.	.
THCA	CAediting_1408374	chr20_18488538_-	6.04861195237885e-17	0.366681929690027	.	.	.	.
KIRC	CAediting_1408374	chr20_18488538_-	3.8390375040023e-14	0.328451711511206	.	.	.	.
UCEC	CAediting_1408374	chr20_18488538_-	7.61477050429784e-09	0.324200554789565	.	.	.	.
ACC	CAediting_1408374	chr20_18488538_-	2.84441115926086e-06	0.58412770140094	.	.	.	.
ESCA	CAediting_1408374	chr20_18488538_-	0.0466768582281482	0.161618905975934	.	.	.	.
OV	CAediting_1408374	chr20_18488538_-	1.12115901650593e-11	0.362373431999532	.	.	.	.
PAAD	CAediting_1408374	chr20_18488538_-	0.00465059419929495	0.250603256342196	.	.	.	.
PCPG	CAediting_1408374	chr20_18488538_-	3.88548819402444e-06	0.422358696191571	.	.	.	.
SKCM	CAediting_1408374	chr20_18488538_-	3.68350852781196e-12	0.372362175100957	.	.	.	.
READ	CAediting_1408374	chr20_18488538_-	0.00404261228933394	0.316103475886013	.	.	.	.
SARC	CAediting_1408374	chr20_18488538_-	3.58334302159371e-08	0.430005642860113	.	.	.	.
TGCT	CAediting_1408374	chr20_18488538_-	6.41971895812976e-16	0.633058069040194	.	.	.	.
THYM	CAediting_1408374	chr20_18488538_-	0.00063301183578135	0.378514740191069	.	.	.	.
BLCA	CAediting_1408375	chr20_18488539_-	2.03114018836842e-10	0.421700759641743	.	.	.	.
LGG	CAediting_1408375	chr20_18488539_-	7.59082884766081e-14	0.379996635692004	.	.	.	.
BRCA	CAediting_1408375	chr20_18488539_-	2.14692877758312e-70	0.529205241748203	.	.	.	.
LIHC	CAediting_1408375	chr20_18488539_-	0.000239384079192547	0.217857131510225	.	.	.	.
CESC	CAediting_1408375	chr20_18488539_-	5.36755115305701e-09	0.40169137464574	.	.	.	.
LUAD	CAediting_1408375	chr20_18488539_-	2.28814182022451e-19	0.419420832054962	.	.	.	.
COAD	CAediting_1408375	chr20_18488539_-	0.00116496297381044	0.221044814898487	.	.	.	.
LUSC	CAediting_1408375	chr20_18488539_-	2.04337770198034e-16	0.423662496484206	.	.	.	.
GBM	CAediting_1408375	chr20_18488539_-	1.45480351113072e-05	0.349235983108101	.	.	.	.
PRAD	CAediting_1408375	chr20_18488539_-	4.27975340339866e-07	0.274425207487047	.	.	.	.
HNSC	CAediting_1408375	chr20_18488539_-	1.6893056508986e-05	0.237617366371437	.	.	.	.
STAD	CAediting_1408375	chr20_18488539_-	9.92008207412682e-12	0.379212050043219	.	.	.	.
THCA	CAediting_1408375	chr20_18488539_-	3.73874743126538e-16	0.363796687217403	.	.	.	.
KIRC	CAediting_1408375	chr20_18488539_-	3.63743230316348e-14	0.331558959258867	.	.	.	.
UCEC	CAediting_1408375	chr20_18488539_-	4.21548110727508e-06	0.290239199237205	.	.	.	.
ESCA	CAediting_1408375	chr20_18488539_-	0.00137832266492469	0.273633947844502	.	.	.	.
OV	CAediting_1408375	chr20_18488539_-	9.8968596971399e-10	0.342924811458931	.	.	.	.
PAAD	CAediting_1408375	chr20_18488539_-	0.00194154371272353	0.281297512176205	.	.	.	.
PCPG	CAediting_1408375	chr20_18488539_-	0.0147889984730622	0.250734288399901	.	.	.	.
SKCM	CAediting_1408375	chr20_18488539_-	1.27972886820487e-05	0.2649982568291	.	.	.	.
SARC	CAediting_1408375	chr20_18488539_-	4.52762345775816e-12	0.586627008390752	.	.	.	.
TGCT	CAediting_1408375	chr20_18488539_-	3.3728771955588e-15	0.640417117660515	.	.	.	.
THYM	CAediting_1408375	chr20_18488539_-	0.000308843142877679	0.402834737692805	.	.	.	.
BRCA	CAediting_1408376	chr20_18488547_-	0.000730473305606321	0.195923828567057	.	.	.	.

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Relation with cancer stages for RBBP9

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_1408306	chr20_18487708_-	0.00379434100682405	0.339314064950644
BLCA	pathologic_stage	CAediting_1408328	chr20_18487867_-	0.00944201541703359	0.132650878095335
BRCA	pathologic_stage	CAediting_1408341	chr20_18488361_-	0.0352714230201011	0.205709030079752
BRCA	pathologic_stage	CAediting_1408363	chr20_18488465_-	0.0203064833735057	0.091219741473563
BRCA	pathologic_stage	CAediting_1408374	chr20_18488538_-	0.0104411089674261	0.0812755612390952
BRCA	pathologic_stage	CAediting_1408375	chr20_18488539_-	0.0293839404153356	0.071090770639538
COAD	pathologic_stage	CAediting_1408346	chr20_18488410_-	0.0485601110625431	0.194860523883018
COAD	pathologic_stage	CAediting_1408358	chr20_18488445_-	0.0294351062250222	0.288656174932063
ESCA	clinical_stage	CAediting_1408323	chr20_18487829_-	0.0101318474746852	-0.640289904947747
ESCA	pathologic_stage	CAediting_1408329	chr20_18487868_-	0.0311181776861273	-0.265619673669077
KIRC	pathologic_stage	CAediting_1408376	chr20_18488547_-	0.00294915454430483	0.200460795158923
KIRP	pathologic_stage	CAediting_1408304	chr20_18487695_-	0.0403545755267313	-0.129761384596865
KIRP	pathologic_stage	CAediting_1408356	chr20_18488443_-	0.0384826832615287	0.171490617470139
LIHC	pathologic_stage	CAediting_1408356	chr20_18488443_-	0.0268327937286913	0.16642690931282
LIHC	pathologic_stage	CAediting_1408369	chr20_18488498_-	0.0480260386888334	-0.120894686598828
LIHC	pathologic_stage	CAediting_1408371	chr20_18488516_-	0.0319145539864858	0.297972877445415
LUAD	pathologic_stage	CAediting_1408306	chr20_18487708_-	0.00985446466664777	0.249656073108612
LUAD	pathologic_stage	CAediting_1408323	chr20_18487829_-	0.0343731593498002	0.146784159241976
LUAD	pathologic_stage	CAediting_1408369	chr20_18488498_-	0.028867276419217	0.118532640428067
LUSC	pathologic_stage	CAediting_1408324	chr20_18487830_-	0.0341081876187434	-0.14133010223648
MESO	pathologic_stage	CAediting_1408328	chr20_18487867_-	0.00491879123023482	-0.321468848663565
PAAD	pathologic_stage	CAediting_1408369	chr20_18488498_-	0.0409335364248746	0.209062670893862
TGCT	clinical_stage	CAediting_1408329	chr20_18487868_-	0.0298291079325106	-0.307508084590996
TGCT	pathologic_stage	CAediting_1408304	chr20_18487695_-	0.00693678359984794	-0.307257972033407
TGCT	pathologic_stage	CAediting_1408305	chr20_18487707_-	0.00900982505148369	-0.303660813630121
TGCT	pathologic_stage	CAediting_1408328	chr20_18487867_-	0.0029689225637243	-0.324153782727469
TGCT	pathologic_stage	CAediting_1408329	chr20_18487868_-	0.00101894453877461	-0.446617799935713
THCA	pathologic_stage	CAediting_1408328	chr20_18487867_-	0.0400461375132414	0.0917690432645972
THCA	pathologic_stage	CAediting_1408356	chr20_18488443_-	0.000797151775469816	0.162272314474583
THCA	pathologic_stage	CAediting_1408358	chr20_18488445_-	0.00473258445478679	0.162406115009647
THCA	pathologic_stage	CAediting_1408373	chr20_18488533_-	0.0422128407108257	0.112757523231297
THCA	pathologic_stage	CAediting_1408375	chr20_18488539_-	0.031241129100312	0.100015299172824
UCEC	clinical_stage	CAediting_1408350	chr20_18488430_-	0.0140971013232768	0.33227654267173
UCEC	clinical_stage	CAediting_1408374	chr20_18488538_-	0.0132505605300087	-0.142161959450181

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Relation with survival for RBBP9

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
BLCA	CAediting_1408363	chr20_18488465_-	0.00987314351383828	0.01974	0.00337783
BLCA	CAediting_1408369	chr20_18488498_-	0.0209709417935308	0.035234	0.0447059
BRCA	CAediting_1408322	chr20_18487828_-	0.00823823616490316	0.00875349	0.022744
LIHC	CAediting_1408305	chr20_18487707_-	0.0316659715690175	0.018421	0.20887
UCEC	CAediting_1408363	chr20_18488465_-	0.0063276708904707	0.038067	59.1151
KIRP	CAediting_1408329	chr20_18487868_-	0.0213000047943119	0.0238065	1162.26
ESCA	CAediting_1408356	chr20_18488443_-	0.0300138855227954	0.0472604	51.6486

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RelatedDrugs for RBBP9

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for RBBP9

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene