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Editing gene: TCFL5 (CAeditome ID:10732)

Gene summary for TCFL5

Gene summary

Gene information	Gene symbol	TCFL5
	Gene ID	10732
	Gene name	transcription factor like 5
	Synonyms	CHA\|E2BP-1\|Figlb\|SOSF1\|bHLHe82
	Cytomap	20q13.33
	Type of gene	protein-coding
	Description	transcription factor-like 5 proteinHPV-16 E2-binding protein 1cha transcription factorspermatogenesis- and oogenesis-specific bHLH-containing protein 1transcription factor-like 5 (basic helix-loop-helix)
	Modification date	20210518
	UniProtAcc	Q9UL49
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
TCFL5	GO:0000978	Transcription factor-like 5 protein	12923186
TCFL5	GO:0001227	Transcription factor-like 5 protein	12923186
TCFL5	GO:0003677	Transcription factor-like 5 protein	9763657
TCFL5	GO:1990837	Transcription factor-like 5 protein	28473536
TCFL5	GO:0000122	Transcription factor-like 5 protein	12923186
TCFL5	GO:0006355	Transcription factor-like 5 protein	9763657
TCFL5	GO:0005634	Transcription factor-like 5 protein	9763657

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RNA A-to-I events for TCFL5

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000101190.11

RNA A-to-I editing events in Cancer.

CAediting_1442047(62844444, -), CAediting_1442048(62844445, -), CAediting_1442049(62844517, -), CAediting_1442050(62844523, -), CAediting_1442051(62844539, -), CAediting_1442052(62844545, -), CAediting_1442053(62844640, -), CAediting_1442054(62844643, -), CAediting_1442055(62844645, -), CAediting_1442056(62844671, -), CAediting_1442057(62844680, -), CAediting_1442058(62844701, -), CAediting_1442059(62844728, -), CAediting_1442060(62844733, -), CAediting_1442061(62844734, -), CAediting_1442062(62844760, -), CAediting_1442063(62844765, -), CAediting_1442064(62844770, -), CAediting_1442065(62844773, -), CAediting_1442066(62844799, -), CAediting_1442067(62844800, -), CAediting_1442068(62844863, -), CAediting_1442069(62844868, -), CAediting_1442070(62844869, -), CAediting_1442071(62844887, -), CAediting_1442072(62845206, -), CAediting_1442073(62845207, -), CAediting_1442074(62845214, -), CAediting_1442075(62845227, -), CAediting_1442076(62845237, -), CAediting_1442077(62845260, -), CAediting_1442078(62845286, -), CAediting_1442079(62845289, -), CAediting_1442080(62845290, -), CAediting_1442081(62845295, -), CAediting_1442082(62845300, -), CAediting_1442083(62845304, -), CAediting_1442084(62845373, -), CAediting_1442085(62845378, -), CAediting_1442086(62845409, -), CAediting_1442087(62847825, -), CAediting_1442088(62848572, -), CAediting_1442089(62849046, -), CAediting_1442090(62849052, -), CAediting_1442091(62849113, -), CAediting_1442092(62849693, -), CAediting_1442093(62849839, -), CAediting_1442094(62851821, -), CAediting_1442095(62851822, -), CAediting_1442096(62851826, -), CAediting_1442097(62851827, -), CAediting_1442098(62851832, -), CAediting_1442099(62851839, -), CAediting_1442100(62851843, -), CAediting_1442101(62851847, -), CAediting_1442102(62851862, -), CAediting_1442103(62851870, -), CAediting_1442104(62851873, -), CAediting_1442105(62851875, -), CAediting_1442106(62851877, -), CAediting_1442107(62851886, -), CAediting_1442108(62851906, -), CAediting_1442109(62851907, -), CAediting_1442110(62851914, -), CAediting_1442111(62851917, -), CAediting_1442112(62851920, -), CAediting_1442113(62851930, -), CAediting_1442114(62851941, -), CAediting_1442115(62851947, -), CAediting_1442116(62851965, -), CAediting_1442117(62851969, -), CAediting_1442118(62851972, -), CAediting_1442119(62851973, -), CAediting_1442120(62851974, -), CAediting_1442121(62851975, -), CAediting_1442122(62851976, -), CAediting_1442123(62851978, -), CAediting_1442124(62851980, -), CAediting_1442125(62851981, -), CAediting_1442126(62851982, -), CAediting_1442127(62851983, -), CAediting_1442128(62851984, -), CAediting_1442129(62851987, -), CAediting_1442130(62852001, -), CAediting_1442131(62852010, -), CAediting_1442132(62852022, -), CAediting_1442133(62852024, -), CAediting_1442134(62852033, -), CAediting_1442135(62852038, -), CAediting_1442136(62852069, -), CAediting_1442137(62852072, -), CAediting_1442138(62852077, -), CAediting_1442139(62852090, -), CAediting_1442140(62852094, -), CAediting_1442141(62852724, -), CAediting_1442142(62852747, -), CAediting_1442143(62853382, -), CAediting_1442144(62853407, -), CAediting_1442145(62853440, -), CAediting_1442146(62853444, -), CAediting_1442147(62853488, -), CAediting_1442148(62853496, -), CAediting_1442149(62853514, -), CAediting_1442150(62853517, -), CAediting_1442151(62853519, -), CAediting_1442152(62853520, -), CAediting_1442153(62853526, -), CAediting_1442154(62853527, -), CAediting_1442155(62853529, -), CAediting_1442156(62853530, -), CAediting_1442157(62853546, -), CAediting_1442158(62853547, -), CAediting_1442159(62853552, -), CAediting_1442160(62853554, -), CAediting_1442161(62853578, -), CAediting_1442162(62853594, -), CAediting_1442163(62853600, -), CAediting_1442164(62853615, -), CAediting_1442165(62853618, -), CAediting_1442166(62853623, -), CAediting_1442167(62853624, -), CAediting_1442168(62853632, -), CAediting_1442169(62853640, -), CAediting_1442170(62853646, -), CAediting_1442171(62855174, -), CAediting_1442172(62855175, -), CAediting_1442173(62855193, -), CAediting_1442174(62855194, -), CAediting_1442175(62855217, -), CAediting_1442176(62855222, -), CAediting_1442177(62855262, -), CAediting_1442178(62855268, -), CAediting_1442179(62855277, -), CAediting_1442180(62855283, -), CAediting_1442181(62855290, -), CAediting_1442182(62855294, -), CAediting_1442183(62855306, -), CAediting_1442184(62855362, -), CAediting_1442185(62855379, -), CAediting_1442186(62855380, -), CAediting_1442187(62855390, -), CAediting_1442188(62855510, -), CAediting_1442189(62855550, -), CAediting_1442190(62855562, -), CAediting_1442191(62855575, -), CAediting_1442192(62855604, -), CAediting_1442193(62855638, -), CAediting_1442194(62855666, -), CAediting_1442195(62855683, -), CAediting_1442196(62855684, -), CAediting_1442197(62855690, -), CAediting_1442198(62855708, -), CAediting_1442199(62855727, -), CAediting_1442200(62855753, -), CAediting_1442201(62855985, -), CAediting_1442202(62856006, -), CAediting_1442203(62856066, -), CAediting_1442204(62856069, -), CAediting_1442205(62856076, -), CAediting_1442206(62856083, -), CAediting_1442207(62856101, -), CAediting_1442208(62856102, -), CAediting_1442209(62856106, -), CAediting_1442210(62856128, -), CAediting_1442211(62856138, -), CAediting_1442212(62856150, -), CAediting_1442213(62856174, -), CAediting_1442214(62856187, -), CAediting_1442215(62856203, -), CAediting_1442216(62856251, -), CAediting_1442217(62856540, -), CAediting_1442218(62856594, -), CAediting_1442219(62856606, -), CAediting_1442220(62856624, -), CAediting_1442221(62856644, -), CAediting_1442222(62859858, -), CAediting_1442223(62859859, -), CAediting_1442224(62859927, -), CAediting_1442225(62859936, -),

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RNA editing positional annotations for TCFL5 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1442047	chr20_62844444_-	intronic
CAediting_1442048	chr20_62844445_-	intronic
CAediting_1442049	chr20_62844517_-	intronic
CAediting_1442050	chr20_62844523_-	intronic
CAediting_1442051	chr20_62844539_-	intronic
CAediting_1442052	chr20_62844545_-	intronic
CAediting_1442053	chr20_62844640_-	intronic
CAediting_1442054	chr20_62844643_-	intronic
CAediting_1442055	chr20_62844645_-	intronic
CAediting_1442056	chr20_62844671_-	intronic
CAediting_1442057	chr20_62844680_-	intronic
CAediting_1442058	chr20_62844701_-	intronic
CAediting_1442059	chr20_62844728_-	intronic
CAediting_1442060	chr20_62844733_-	intronic
CAediting_1442061	chr20_62844734_-	intronic
CAediting_1442062	chr20_62844760_-	intronic
CAediting_1442063	chr20_62844765_-	intronic
CAediting_1442064	chr20_62844770_-	intronic
CAediting_1442065	chr20_62844773_-	intronic
CAediting_1442066	chr20_62844799_-	intronic
CAediting_1442067	chr20_62844800_-	intronic
CAediting_1442068	chr20_62844863_-	intronic
CAediting_1442069	chr20_62844868_-	intronic
CAediting_1442070	chr20_62844869_-	intronic
CAediting_1442071	chr20_62844887_-	intronic
CAediting_1442072	chr20_62845206_-	UTR3
CAediting_1442073	chr20_62845207_-	UTR3
CAediting_1442074	chr20_62845214_-	UTR3
CAediting_1442075	chr20_62845227_-	UTR3
CAediting_1442076	chr20_62845237_-	UTR3
CAediting_1442077	chr20_62845260_-	UTR3
CAediting_1442078	chr20_62845286_-	UTR3
CAediting_1442079	chr20_62845289_-	UTR3
CAediting_1442080	chr20_62845290_-	UTR3
CAediting_1442081	chr20_62845295_-	UTR3
CAediting_1442082	chr20_62845300_-	UTR3
CAediting_1442083	chr20_62845304_-	UTR3
CAediting_1442084	chr20_62845373_-	UTR3
CAediting_1442085	chr20_62845378_-	UTR3
CAediting_1442086	chr20_62845409_-	UTR3
CAediting_1442087	chr20_62847825_-	intronic
CAediting_1442088	chr20_62848572_-	intronic
CAediting_1442089	chr20_62849046_-	intronic
CAediting_1442090	chr20_62849052_-	intronic
CAediting_1442091	chr20_62849113_-	intronic
CAediting_1442092	chr20_62849693_-	intronic
CAediting_1442093	chr20_62849839_-	intronic
CAediting_1442094	chr20_62851821_-	intronic
CAediting_1442095	chr20_62851822_-	intronic
CAediting_1442096	chr20_62851826_-	intronic
CAediting_1442097	chr20_62851827_-	intronic
CAediting_1442098	chr20_62851832_-	intronic
CAediting_1442099	chr20_62851839_-	intronic
CAediting_1442100	chr20_62851843_-	intronic
CAediting_1442101	chr20_62851847_-	intronic
CAediting_1442102	chr20_62851862_-	intronic
CAediting_1442103	chr20_62851870_-	intronic
CAediting_1442104	chr20_62851873_-	intronic
CAediting_1442105	chr20_62851875_-	intronic
CAediting_1442106	chr20_62851877_-	intronic
CAediting_1442107	chr20_62851886_-	intronic
CAediting_1442108	chr20_62851906_-	intronic
CAediting_1442109	chr20_62851907_-	intronic
CAediting_1442110	chr20_62851914_-	intronic
CAediting_1442111	chr20_62851917_-	intronic
CAediting_1442112	chr20_62851920_-	intronic
CAediting_1442113	chr20_62851930_-	intronic
CAediting_1442114	chr20_62851941_-	intronic
CAediting_1442115	chr20_62851947_-	intronic
CAediting_1442116	chr20_62851965_-	intronic
CAediting_1442117	chr20_62851969_-	intronic
CAediting_1442118	chr20_62851972_-	intronic
CAediting_1442119	chr20_62851973_-	intronic
CAediting_1442120	chr20_62851974_-	intronic
CAediting_1442121	chr20_62851975_-	intronic
CAediting_1442122	chr20_62851976_-	intronic
CAediting_1442123	chr20_62851978_-	intronic
CAediting_1442124	chr20_62851980_-	intronic
CAediting_1442125	chr20_62851981_-	intronic
CAediting_1442126	chr20_62851982_-	intronic
CAediting_1442127	chr20_62851983_-	intronic
CAediting_1442128	chr20_62851984_-	intronic
CAediting_1442129	chr20_62851987_-	intronic
CAediting_1442130	chr20_62852001_-	intronic
CAediting_1442131	chr20_62852010_-	intronic
CAediting_1442132	chr20_62852022_-	intronic
CAediting_1442133	chr20_62852024_-	intronic
CAediting_1442134	chr20_62852033_-	intronic
CAediting_1442135	chr20_62852038_-	intronic
CAediting_1442136	chr20_62852069_-	intronic
CAediting_1442137	chr20_62852072_-	intronic
CAediting_1442138	chr20_62852077_-	intronic
CAediting_1442139	chr20_62852090_-	intronic
CAediting_1442140	chr20_62852094_-	intronic
CAediting_1442141	chr20_62852724_-	intronic
CAediting_1442142	chr20_62852747_-	intronic
CAediting_1442143	chr20_62853382_-	intronic
CAediting_1442144	chr20_62853407_-	intronic
CAediting_1442145	chr20_62853440_-	intronic
CAediting_1442146	chr20_62853444_-	intronic
CAediting_1442147	chr20_62853488_-	intronic
CAediting_1442148	chr20_62853496_-	intronic
CAediting_1442149	chr20_62853514_-	intronic
CAediting_1442150	chr20_62853517_-	intronic
CAediting_1442151	chr20_62853519_-	intronic
CAediting_1442152	chr20_62853520_-	intronic
CAediting_1442153	chr20_62853526_-	intronic
CAediting_1442154	chr20_62853527_-	intronic
CAediting_1442155	chr20_62853529_-	intronic
CAediting_1442156	chr20_62853530_-	intronic
CAediting_1442157	chr20_62853546_-	intronic
CAediting_1442158	chr20_62853547_-	intronic
CAediting_1442159	chr20_62853552_-	intronic
CAediting_1442160	chr20_62853554_-	intronic
CAediting_1442161	chr20_62853578_-	intronic
CAediting_1442162	chr20_62853594_-	intronic
CAediting_1442163	chr20_62853600_-	intronic
CAediting_1442164	chr20_62853615_-	intronic
CAediting_1442165	chr20_62853618_-	intronic
CAediting_1442166	chr20_62853623_-	intronic
CAediting_1442167	chr20_62853624_-	intronic
CAediting_1442168	chr20_62853632_-	intronic
CAediting_1442169	chr20_62853640_-	intronic
CAediting_1442170	chr20_62853646_-	intronic
CAediting_1442171	chr20_62855174_-	intronic
CAediting_1442172	chr20_62855175_-	intronic
CAediting_1442173	chr20_62855193_-	intronic
CAediting_1442174	chr20_62855194_-	intronic
CAediting_1442175	chr20_62855217_-	intronic
CAediting_1442176	chr20_62855222_-	intronic
CAediting_1442177	chr20_62855262_-	intronic
CAediting_1442178	chr20_62855268_-	intronic
CAediting_1442179	chr20_62855277_-	intronic
CAediting_1442180	chr20_62855283_-	intronic
CAediting_1442181	chr20_62855290_-	intronic
CAediting_1442182	chr20_62855294_-	intronic
CAediting_1442183	chr20_62855306_-	intronic
CAediting_1442184	chr20_62855362_-	intronic
CAediting_1442185	chr20_62855379_-	intronic
CAediting_1442186	chr20_62855380_-	intronic
CAediting_1442187	chr20_62855390_-	intronic
CAediting_1442188	chr20_62855510_-	intronic
CAediting_1442189	chr20_62855550_-	intronic
CAediting_1442190	chr20_62855562_-	intronic
CAediting_1442191	chr20_62855575_-	intronic
CAediting_1442192	chr20_62855604_-	intronic
CAediting_1442193	chr20_62855638_-	intronic
CAediting_1442194	chr20_62855666_-	intronic
CAediting_1442195	chr20_62855683_-	intronic
CAediting_1442196	chr20_62855684_-	intronic
CAediting_1442197	chr20_62855690_-	intronic
CAediting_1442198	chr20_62855708_-	intronic
CAediting_1442199	chr20_62855727_-	intronic
CAediting_1442200	chr20_62855753_-	intronic
CAediting_1442201	chr20_62855985_-	intronic
CAediting_1442202	chr20_62856006_-	intronic
CAediting_1442203	chr20_62856066_-	intronic
CAediting_1442204	chr20_62856069_-	intronic
CAediting_1442205	chr20_62856076_-	intronic
CAediting_1442206	chr20_62856083_-	intronic
CAediting_1442207	chr20_62856101_-	intronic
CAediting_1442208	chr20_62856102_-	intronic
CAediting_1442209	chr20_62856106_-	intronic
CAediting_1442210	chr20_62856128_-	intronic
CAediting_1442211	chr20_62856138_-	intronic
CAediting_1442212	chr20_62856150_-	intronic
CAediting_1442213	chr20_62856174_-	intronic
CAediting_1442214	chr20_62856187_-	intronic
CAediting_1442215	chr20_62856203_-	intronic
CAediting_1442216	chr20_62856251_-	intronic
CAediting_1442217	chr20_62856540_-	intronic
CAediting_1442218	chr20_62856594_-	intronic
CAediting_1442219	chr20_62856606_-	intronic
CAediting_1442220	chr20_62856624_-	intronic
CAediting_1442221	chr20_62856644_-	intronic
CAediting_1442222	chr20_62859858_-	intronic
CAediting_1442223	chr20_62859859_-	intronic
CAediting_1442224	chr20_62859927_-	intronic
CAediting_1442225	chr20_62859936_-	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1442047	chr20_62844444_-	SINE	Alu	AluJb
CAediting_1442048	chr20_62844445_-	SINE	Alu	AluJb
CAediting_1442049	chr20_62844517_-	SINE	Alu	AluJb
CAediting_1442050	chr20_62844523_-	SINE	Alu	AluJb
CAediting_1442051	chr20_62844539_-	SINE	Alu	AluJb
CAediting_1442052	chr20_62844545_-	SINE	Alu	AluJb
CAediting_1442053	chr20_62844640_-	SINE	Alu	AluSx1
CAediting_1442054	chr20_62844643_-	SINE	Alu	AluSx1
CAediting_1442055	chr20_62844645_-	SINE	Alu	AluSx1
CAediting_1442056	chr20_62844671_-	SINE	Alu	AluSx1
CAediting_1442057	chr20_62844680_-	SINE	Alu	AluSx1
CAediting_1442058	chr20_62844701_-	SINE	Alu	AluSx1
CAediting_1442059	chr20_62844728_-	SINE	Alu	AluSx1
CAediting_1442060	chr20_62844733_-	SINE	Alu	AluSx1
CAediting_1442061	chr20_62844734_-	SINE	Alu	AluSx1
CAediting_1442062	chr20_62844760_-	SINE	Alu	AluSx1
CAediting_1442063	chr20_62844765_-	SINE	Alu	AluSx1
CAediting_1442064	chr20_62844770_-	SINE	Alu	AluSx1
CAediting_1442065	chr20_62844773_-	SINE	Alu	AluSx1
CAediting_1442066	chr20_62844799_-	SINE	Alu	AluSx1
CAediting_1442067	chr20_62844800_-	SINE	Alu	AluSx1
CAediting_1442068	chr20_62844863_-	SINE	Alu	AluSx1
CAediting_1442069	chr20_62844868_-	SINE	Alu	AluSx1
CAediting_1442070	chr20_62844869_-	SINE	Alu	AluSx1
CAediting_1442071	chr20_62844887_-	SINE	Alu	AluSx1
CAediting_1442072	chr20_62845206_-	SINE	Alu	AluSq2
CAediting_1442073	chr20_62845207_-	SINE	Alu	AluSq2
CAediting_1442074	chr20_62845214_-	SINE	Alu	AluSq2
CAediting_1442075	chr20_62845227_-	SINE	Alu	AluSq2
CAediting_1442076	chr20_62845237_-	SINE	Alu	AluSq2
CAediting_1442077	chr20_62845260_-	SINE	Alu	AluSq2
CAediting_1442078	chr20_62845286_-	SINE	Alu	AluSq2
CAediting_1442079	chr20_62845289_-	SINE	Alu	AluSq2
CAediting_1442080	chr20_62845290_-	SINE	Alu	AluSq2
CAediting_1442081	chr20_62845295_-	SINE	Alu	AluSq2
CAediting_1442082	chr20_62845300_-	SINE	Alu	AluSq2
CAediting_1442083	chr20_62845304_-	SINE	Alu	AluSq2
CAediting_1442084	chr20_62845373_-	SINE	Alu	AluSq2
CAediting_1442085	chr20_62845378_-	SINE	Alu	AluSq2
CAediting_1442086	chr20_62845409_-	SINE	Alu	AluSq2
CAediting_1442087	chr20_62847825_-	SINE	Alu	AluSx
CAediting_1442088	chr20_62848572_-	SINE	Alu	AluSq2
CAediting_1442089	chr20_62849046_-	SINE	Alu	AluSz
CAediting_1442090	chr20_62849052_-	SINE	Alu	AluSz
CAediting_1442091	chr20_62849113_-	SINE	Alu	AluSz
CAediting_1442092	chr20_62849693_-	SINE	Alu	AluJb
CAediting_1442093	chr20_62849839_-	SINE	Alu	AluJb
CAediting_1442094	chr20_62851821_-	SINE	Alu	AluSz
CAediting_1442095	chr20_62851822_-	SINE	Alu	AluSz
CAediting_1442096	chr20_62851826_-	SINE	Alu	AluSz
CAediting_1442097	chr20_62851827_-	SINE	Alu	AluSz
CAediting_1442098	chr20_62851832_-	SINE	Alu	AluSz
CAediting_1442099	chr20_62851839_-	SINE	Alu	AluSz
CAediting_1442100	chr20_62851843_-	SINE	Alu	AluSz
CAediting_1442101	chr20_62851847_-	SINE	Alu	AluSz
CAediting_1442102	chr20_62851862_-	SINE	Alu	AluSz
CAediting_1442103	chr20_62851870_-	SINE	Alu	AluSz
CAediting_1442104	chr20_62851873_-	SINE	Alu	AluSz
CAediting_1442105	chr20_62851875_-	SINE	Alu	AluSz
CAediting_1442106	chr20_62851877_-	SINE	Alu	AluSz
CAediting_1442107	chr20_62851886_-	SINE	Alu	AluSz
CAediting_1442108	chr20_62851906_-	SINE	Alu	AluSz
CAediting_1442109	chr20_62851907_-	SINE	Alu	AluSz
CAediting_1442110	chr20_62851914_-	SINE	Alu	AluSz
CAediting_1442111	chr20_62851917_-	SINE	Alu	AluSz
CAediting_1442112	chr20_62851920_-	SINE	Alu	AluSz
CAediting_1442113	chr20_62851930_-	SINE	Alu	AluSz
CAediting_1442114	chr20_62851941_-	SINE	Alu	AluSz
CAediting_1442115	chr20_62851947_-	SINE	Alu	AluSz
CAediting_1442116	chr20_62851965_-	SINE	Alu	AluSz
CAediting_1442117	chr20_62851969_-	SINE	Alu	AluSz
CAediting_1442118	chr20_62851972_-	SINE	Alu	AluSz
CAediting_1442119	chr20_62851973_-	SINE	Alu	AluSz
CAediting_1442120	chr20_62851974_-	SINE	Alu	AluSz
CAediting_1442121	chr20_62851975_-	SINE	Alu	AluSz
CAediting_1442122	chr20_62851976_-	SINE	Alu	AluSz
CAediting_1442123	chr20_62851978_-	SINE	Alu	AluSz
CAediting_1442124	chr20_62851980_-	SINE	Alu	AluSz
CAediting_1442125	chr20_62851981_-	SINE	Alu	AluSz
CAediting_1442126	chr20_62851982_-	SINE	Alu	AluSz
CAediting_1442127	chr20_62851983_-	SINE	Alu	AluSz
CAediting_1442128	chr20_62851984_-	SINE	Alu	AluSz
CAediting_1442129	chr20_62851987_-	SINE	Alu	AluSz
CAediting_1442130	chr20_62852001_-	SINE	Alu	AluSz
CAediting_1442131	chr20_62852010_-	SINE	Alu	AluSz
CAediting_1442132	chr20_62852022_-	SINE	Alu	AluSz
CAediting_1442133	chr20_62852024_-	SINE	Alu	AluSz
CAediting_1442134	chr20_62852033_-	SINE	Alu	AluSz
CAediting_1442135	chr20_62852038_-	SINE	Alu	AluSz
CAediting_1442136	chr20_62852069_-	SINE	Alu	AluSz
CAediting_1442137	chr20_62852072_-	SINE	Alu	AluSz
CAediting_1442138	chr20_62852077_-	SINE	Alu	AluSz
CAediting_1442139	chr20_62852090_-	SINE	Alu	AluSz
CAediting_1442140	chr20_62852094_-	SINE	Alu	AluSz
CAediting_1442143	chr20_62853382_-	SINE	Alu	AluJb
CAediting_1442144	chr20_62853407_-	SINE	Alu	AluJb
CAediting_1442145	chr20_62853440_-	SINE	Alu	AluJb
CAediting_1442146	chr20_62853444_-	SINE	Alu	AluJb
CAediting_1442147	chr20_62853488_-	SINE	Alu	AluJb
CAediting_1442148	chr20_62853496_-	SINE	Alu	AluJb
CAediting_1442149	chr20_62853514_-	SINE	Alu	AluJb
CAediting_1442150	chr20_62853517_-	SINE	Alu	AluJb
CAediting_1442151	chr20_62853519_-	SINE	Alu	AluJb
CAediting_1442152	chr20_62853520_-	SINE	Alu	AluJb
CAediting_1442153	chr20_62853526_-	SINE	Alu	AluJb
CAediting_1442154	chr20_62853527_-	SINE	Alu	AluJb
CAediting_1442155	chr20_62853529_-	SINE	Alu	AluJb
CAediting_1442156	chr20_62853530_-	SINE	Alu	AluJb
CAediting_1442157	chr20_62853546_-	SINE	Alu	AluJb
CAediting_1442158	chr20_62853547_-	SINE	Alu	AluJb
CAediting_1442159	chr20_62853552_-	SINE	Alu	AluJb
CAediting_1442160	chr20_62853554_-	SINE	Alu	AluJb
CAediting_1442161	chr20_62853578_-	SINE	Alu	AluJb
CAediting_1442162	chr20_62853594_-	SINE	Alu	AluJb
CAediting_1442163	chr20_62853600_-	SINE	Alu	AluJb
CAediting_1442164	chr20_62853615_-	SINE	Alu	AluJb
CAediting_1442165	chr20_62853618_-	SINE	Alu	AluJb
CAediting_1442166	chr20_62853623_-	SINE	Alu	AluJb
CAediting_1442167	chr20_62853624_-	SINE	Alu	AluJb
CAediting_1442168	chr20_62853632_-	SINE	Alu	AluJb
CAediting_1442169	chr20_62853640_-	SINE	Alu	AluJb
CAediting_1442170	chr20_62853646_-	SINE	Alu	AluJb
CAediting_1442171	chr20_62855174_-	SINE	Alu	AluJo
CAediting_1442172	chr20_62855175_-	SINE	Alu	AluJo
CAediting_1442173	chr20_62855193_-	SINE	Alu	AluJo
CAediting_1442174	chr20_62855194_-	SINE	Alu	AluJo
CAediting_1442175	chr20_62855217_-	SINE	Alu	AluJo
CAediting_1442176	chr20_62855222_-	SINE	Alu	AluJo
CAediting_1442177	chr20_62855262_-	SINE	Alu	AluJo
CAediting_1442178	chr20_62855268_-	SINE	Alu	AluJo
CAediting_1442179	chr20_62855277_-	SINE	Alu	AluJo
CAediting_1442180	chr20_62855283_-	SINE	Alu	AluJo
CAediting_1442181	chr20_62855290_-	SINE	Alu	AluJo
CAediting_1442182	chr20_62855294_-	SINE	Alu	AluJo
CAediting_1442183	chr20_62855306_-	SINE	Alu	AluJo
CAediting_1442184	chr20_62855362_-	SINE	Alu	AluJo
CAediting_1442185	chr20_62855379_-	SINE	Alu	AluJo
CAediting_1442186	chr20_62855380_-	SINE	Alu	AluJo
CAediting_1442187	chr20_62855390_-	SINE	Alu	AluJo
CAediting_1442188	chr20_62855510_-	SINE	Alu	AluSp
CAediting_1442189	chr20_62855550_-	SINE	Alu	AluSp
CAediting_1442190	chr20_62855562_-	SINE	Alu	AluSp
CAediting_1442191	chr20_62855575_-	SINE	Alu	AluSp
CAediting_1442192	chr20_62855604_-	SINE	Alu	AluSp
CAediting_1442193	chr20_62855638_-	SINE	Alu	AluSp
CAediting_1442194	chr20_62855666_-	SINE	Alu	AluSp
CAediting_1442195	chr20_62855683_-	SINE	Alu	AluSp
CAediting_1442196	chr20_62855684_-	SINE	Alu	AluSp
CAediting_1442197	chr20_62855690_-	SINE	Alu	AluSp
CAediting_1442198	chr20_62855708_-	SINE	Alu	AluSp
CAediting_1442199	chr20_62855727_-	SINE	Alu	AluSp
CAediting_1442200	chr20_62855753_-	SINE	Alu	AluSp
CAediting_1442201	chr20_62855985_-	SINE	Alu	AluSx4
CAediting_1442202	chr20_62856006_-	SINE	Alu	AluSx4
CAediting_1442203	chr20_62856066_-	SINE	Alu	AluSx4
CAediting_1442204	chr20_62856069_-	SINE	Alu	AluSx4
CAediting_1442205	chr20_62856076_-	SINE	Alu	AluSx4
CAediting_1442206	chr20_62856083_-	SINE	Alu	AluSx4
CAediting_1442207	chr20_62856101_-	SINE	Alu	AluSx4
CAediting_1442208	chr20_62856102_-	SINE	Alu	AluSx4
CAediting_1442209	chr20_62856106_-	SINE	Alu	AluSx4
CAediting_1442210	chr20_62856128_-	SINE	Alu	AluSx4
CAediting_1442211	chr20_62856138_-	SINE	Alu	AluSx4
CAediting_1442212	chr20_62856150_-	SINE	Alu	AluSx4
CAediting_1442213	chr20_62856174_-	SINE	Alu	AluSx4
CAediting_1442214	chr20_62856187_-	SINE	Alu	AluSx4
CAediting_1442215	chr20_62856203_-	SINE	Alu	AluSx4
CAediting_1442216	chr20_62856251_-	SINE	Alu	AluSx4
CAediting_1442217	chr20_62856540_-	SINE	Alu	AluY
CAediting_1442218	chr20_62856594_-	SINE	Alu	AluY
CAediting_1442219	chr20_62856606_-	SINE	Alu	AluY
CAediting_1442220	chr20_62856624_-	SINE	Alu	AluY
CAediting_1442221	chr20_62856644_-	SINE	Alu	AluY
CAediting_1442222	chr20_62859858_-	SINE	Alu	AluSx1
CAediting_1442223	chr20_62859859_-	SINE	Alu	AluSx1
CAediting_1442224	chr20_62859927_-	SINE	Alu	AluSx1
CAediting_1442225	chr20_62859936_-	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for TCFL5

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_1442141	chr20_62852724_-	62852716:62852724	5SS	3+0i	AGGTGAATA	-10.68	GGGTGAATA	-12.09
IR	CAediting_1442141	chr20_62852724_-	62852720:62852742	3SS	0+2i	ACTATGCTTCTGTCAACCAGGTG	7.61	ACTATGCTTCTGTCAACCGGGTG	-0.35
MEX_2	CAediting_1442141	chr20_62852724_-	62852716:62852724	5SS	3+0i	AGGTGAATA	-10.68	GGGTGAATA	-12.09
ES	CAediting_1442142	chr20_62852747_-	62852739:62852747	5SS	3+0i	AGGTGACTA	-12.69	GGGTGACTA	-14.73
IR	CAediting_1442142	chr20_62852747_-	62852743:62852765	3SS	0+2i	AATATACTTCTGCGGACCAGGTG	3.75	AATATACTTCTGCGGACCGGGTG	-4.21
MEX_2	CAediting_1442142	chr20_62852747_-	62852739:62852747	5SS	3+0i	AGGTGACTA	-12.69	GGGTGACTA	-14.73
ES	CAediting_1442216	chr20_62856251_-	62856247:62856269	3SS	0+2i	TTTTTTTTTTTTTTTTTGAGACG	3.97	TTTTTTTTTTTTTTTTTGGGACG	-3.99

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000101190.11.TCFL5.

Correlation between RNA A-to-I editing and PSI for ENSG00000101190.11.TCFL5.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TCFL5

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

THCA.CAediting_1442176.ENSG00000101190.TCFL5.png
Soverview

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Protein coding region RNA A-to-I editings for TCFL5

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for TCFL5

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1442072	chr20_62845206_-	ENSG00000101190.11	ENST00000217162	hsa-miR-5001-3p	62845205	62845211	7mer-m8	62845204	62845228	149.00	-19.55
CAediting_1442073	chr20_62845207_-	ENSG00000101190.11	ENST00000217162	hsa-miR-1281	62845206	62845213	8mer-1a	62845206	62845222	145.00	-18.19
CAediting_1442075	chr20_62845227_-	ENSG00000101190.11	ENST00000217162	hsa-miR-345-5p	62845223	62845229	7mer-m8	62845222	62845245	148.00	-22.51
CAediting_1442075	chr20_62845227_-	ENSG00000101190.11	ENST00000217162	hsa-miR-6845-3p	62845227	62845232	6mer	62845226	62845246	147.00	-24.88
CAediting_1442076	chr20_62845237_-	ENSG00000101190.11	ENST00000217162	hsa-miR-6849-3p	62845237	62845243	7mer-m8	62845236	62845258	141.00	-14.90
CAediting_1442077	chr20_62845260_-	ENSG00000101190.11	ENST00000217162	hsa-miR-513a-5p	62845259	62845265	7mer-m8	62845258	62845275	156.00	-19.07
CAediting_1442077	chr20_62845260_-	ENSG00000101190.11	ENST00000217162	hsa-miR-513a-5p	62845259	62845265	7mer-m8	62845258	62845275	156.00	-19.07
CAediting_1442077	chr20_62845260_-	ENSG00000101190.11	ENST00000217162	hsa-miR-638	62845254	62845260	7mer-1a	62845254	62845278	159.00	-34.39
CAediting_1442080	chr20_62845290_-	ENSG00000101190.11	ENST00000217162	hsa-miR-6844	62845289	62845295	7mer-m8	62845288	62845309	155.00	-7.49
CAediting_1442081	chr20_62845295_-	ENSG00000101190.11	ENST00000217162	hsa-miR-3680-3p	62845290	62845297	8mer-1a	62845290	62845312	140.00	-14.25
CAediting_1442081	chr20_62845295_-	ENSG00000101190.11	ENST00000217162	hsa-miR-3680-3p	62845290	62845297	8mer-1a	62845290	62845312	140.00	-14.25
CAediting_1442082	chr20_62845300_-	ENSG00000101190.11	ENST00000217162	hsa-miR-325	62845299	62845306	8mer-1a	62845299	62845321	141.00	-11.73
CAediting_1442083	chr20_62845304_-	ENSG00000101190.11	ENST00000217162	hsa-miR-374b-3p	62845299	62845306	8mer-1a	62845299	62845320	141.00	-11.97
CAediting_1442085	chr20_62845378_-	ENSG00000101190.11	ENST00000217162	hsa-miR-150-5p	62845378	62845384	7mer-m8	62845377	62845398	140.00	-15.80
CAediting_1442085	chr20_62845378_-	ENSG00000101190.11	ENST00000217162	hsa-miR-6778-3p	62845376	62845382	7mer-m8	62845375	62845395	143.00	-14.47
CAediting_1442086	chr20_62845409_-	ENSG00000101190.11	ENST00000217162	hsa-miR-6807-5p	62845404	62845410	7mer-m8	62845403	62845424	140.00	-18.60

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1442077	chr20_62845260_-	ENSG00000101190.11	ENST00000217162	hsa-miR-10399-5p	62845258	62845264	7mer-m8	62845257	62845278	152	-11.75
CAediting_1442074	chr20_62845214_-	ENSG00000101190.11	ENST00000217162	hsa-miR-1343-3p	62845211	62845217	7mer-m8	62845210	62845233	151	-24.17
CAediting_1442072	chr20_62845206_-	ENSG00000101190.11	ENST00000217162	hsa-miR-3152-5p	62845205	62845212	8mer-1a	62845205	62845228	150	-16.15
CAediting_1442073	chr20_62845207_-	ENSG00000101190.11	ENST00000217162	hsa-miR-3152-5p	62845205	62845212	8mer-1a	62845205	62845228	150	-16.15
CAediting_1442078	chr20_62845286_-	ENSG00000101190.11	ENST00000217162	hsa-miR-4735-5p	62845285	62845291	7mer-m8	62845284	62845305	140	-5.48
CAediting_1442079	chr20_62845289_-	ENSG00000101190.11	ENST00000217162	hsa-miR-4735-5p	62845285	62845291	7mer-m8	62845284	62845305	140	-5.48
CAediting_1442080	chr20_62845290_-	ENSG00000101190.11	ENST00000217162	hsa-miR-4735-5p	62845285	62845291	7mer-m8	62845284	62845305	140	-5.48
CAediting_1442077	chr20_62845260_-	ENSG00000101190.11	ENST00000217162	hsa-miR-6504-3p	62845258	62845264	7mer-m8	62845257	62845278	144	-12.42
CAediting_1442074	chr20_62845214_-	ENSG00000101190.11	ENST00000217162	hsa-miR-6742-3p	62845211	62845218	8mer-1a	62845211	62845230	145	-14.93
CAediting_1442072	chr20_62845206_-	ENSG00000101190.11	ENST00000217162	hsa-miR-6782-3p	62845202	62845208	7mer-m8	62845201	62845223	153	-17.36
CAediting_1442073	chr20_62845207_-	ENSG00000101190.11	ENST00000217162	hsa-miR-6782-3p	62845202	62845208	7mer-m8	62845201	62845223	153	-17.36
CAediting_1442074	chr20_62845214_-	ENSG00000101190.11	ENST00000217162	hsa-miR-6783-3p	62845211	62845217	7mer-m8	62845210	62845230	150	-21.16
CAediting_1442084	chr20_62845373_-	ENSG00000101190.11	ENST00000217162	hsa-miR-6787-3p	62845372	62845378	7mer-m8	62845371	62845392	143	-18.9
CAediting_1442083	chr20_62845304_-	ENSG00000101190.11	ENST00000217162	hsa-miR-6832-5p	62845303	62845309	7mer-m8	62845302	62845324	142	-20.67
CAediting_1442073	chr20_62845207_-	ENSG00000101190.11	ENST00000217162	hsa-miR-6836-3p	62845206	62845213	8mer-1a	62845206	62845226	140	-14.97
CAediting_1442077	chr20_62845260_-	ENSG00000101190.11	ENST00000217162	hsa-miR-7151-3p	62845259	62845266	8mer-1a	62845259	62845280	143	-12.91

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1351755	chr19_40282625_-	ENSG00000101190.11	ENST00000217162	hsa-miR-641	62845721	62845727	7mer-m8	62845720	62845743	145	-17.61
CAediting_1368054	chr19_46709310_-	ENSG00000101190.11	ENST00000217162	hsa-miR-320e	62845775	62845781	7mer-m8	62845774	62845794	143	-22.9
CAediting_1368054	chr19_46709310_-	ENSG00000101190.11	ENST00000217162	hsa-miR-320e	62845612	62845618	7mer-m8	62845611	62845628	147	-16.88
CAediting_524911	chr7_5495852_-	ENSG00000101190.11	ENST00000217162	hsa-miR-589-3p	62845574	62845580	7mer-1a	62845574	62845597	140	-31.77

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TCFL5

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for TCFL5

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for TCFL5

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BRCA	pathologic_stage	CAediting_1442115	chr20_62851947_-	0.0162284705973604	-0.208107442205272

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Relation with survival for TCFL5

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for TCFL5

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for TCFL5

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene