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Editing gene: TGOLN2 (CAeditome ID:10618)

Gene summary for TGOLN2

Gene summary

Gene information	Gene symbol	TGOLN2
	Gene ID	10618
	Gene name	trans-golgi network protein 2
	Synonyms	TGN38\|TGN46\|TGN48\|TGN51\|TTGN2\|hTGN46\|hTGN48\|hTGN51
	Cytomap	2p11.2
	Type of gene	protein-coding
	Description	trans-Golgi network integral membrane protein 2TGN38 homologtrans-Golgi network glycoprotein 46trans-Golgi network glycoprotein 48trans-Golgi network glycoprotein 51trans-Golgi network protein TGN51
	Modification date	20210518
	UniProtAcc	O43493
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
TGOLN2	GO:0005654	Trans-Golgi network integral membrane protein 2	0000052
TGOLN2	GO:0005794	Trans-Golgi network integral membrane protein 2	0000052
TGOLN2	GO:0005794	Trans-Golgi network integral membrane protein 2	22797923
TGOLN2	GO:0005794	Trans-Golgi network integral membrane protein 2	27435297
TGOLN2	GO:0005802	Trans-Golgi network integral membrane protein 2	18166528
TGOLN2	GO:0005802	Trans-Golgi network integral membrane protein 2	22456507
TGOLN2	GO:0005802	Trans-Golgi network integral membrane protein 2	23386608

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RNA A-to-I events for TGOLN2

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000152291.12

RNA A-to-I editing events in Cancer.

CAediting_196287(85319183, -), CAediting_196288(85319250, -), CAediting_196289(85319254, -), CAediting_196290(85319267, -), CAediting_196291(85319274, -), CAediting_196292(85319275, -), CAediting_196293(85319283, -), CAediting_196294(85319289, -), CAediting_196295(85319306, -), CAediting_196296(85319316, -), CAediting_196297(85319328, -), CAediting_196298(85319334, -), CAediting_196299(85319342, -), CAediting_196300(85319345, -), CAediting_196301(85319346, -), CAediting_196302(85319347, -), CAediting_196303(85319348, -), CAediting_196304(85319349, -), CAediting_196305(85319354, -), CAediting_196306(85319355, -), CAediting_196307(85319371, -), CAediting_196308(85319372, -), CAediting_196309(85319381, -), CAediting_196310(85319391, -), CAediting_196311(85319394, -), CAediting_196312(85319396, -), CAediting_196313(85319404, -), CAediting_196314(85319405, -), CAediting_196315(85319410, -), CAediting_196316(85319413, -), CAediting_196317(85319448, -), CAediting_196318(85319449, -), CAediting_196319(85322984, -), CAediting_196320(85323007, -), CAediting_196321(85323011, -), CAediting_196322(85323013, -), CAediting_196323(85323015, -), CAediting_196324(85323025, -), CAediting_196325(85323030, -), CAediting_196326(85323035, -), CAediting_196327(85323040, -), CAediting_196328(85323043, -), CAediting_196329(85323045, -), CAediting_196330(85323046, -), CAediting_196331(85323050, -), CAediting_196332(85323063, -), CAediting_196333(85323067, -), CAediting_196334(85323074, -), CAediting_196335(85323075, -), CAediting_196336(85323083, -), CAediting_196337(85323093, -), CAediting_196338(85323098, -), CAediting_196339(85323099, -), CAediting_196340(85323102, -), CAediting_196341(85323109, -), CAediting_196342(85323113, -), CAediting_196343(85323118, -), CAediting_196344(85323124, -), CAediting_196345(85323135, -), CAediting_196346(85323136, -), CAediting_196347(85323138, -), CAediting_196348(85323141, -), CAediting_196349(85323143, -), CAediting_196350(85323144, -), CAediting_196351(85323145, -), CAediting_196352(85323146, -), CAediting_196353(85323147, -), CAediting_196354(85323156, -), CAediting_196355(85323161, -), CAediting_196356(85323162, -), CAediting_196357(85323181, -), CAediting_196358(85323186, -), CAediting_196359(85323192, -), CAediting_196360(85323195, -), CAediting_196361(85323200, -), CAediting_196362(85323205, -), CAediting_196363(85323230, -), CAediting_196364(85323231, -), CAediting_196365(85323239, -), CAediting_196366(85323247, -), CAediting_196367(85323249, -), CAediting_196368(85323291, -), CAediting_196369(85323323, -), CAediting_196370(85323331, -), CAediting_196371(85323348, -), CAediting_196372(85323349, -), CAediting_196373(85323361, -), CAediting_196374(85323374, -), CAediting_196375(85323386, -), CAediting_196376(85323398, -), CAediting_196377(85323403, -), CAediting_196378(85323411, -), CAediting_196379(85323417, -), CAediting_196380(85323418, -), CAediting_196381(85323422, -), CAediting_196382(85323454, -), CAediting_196383(85323466, -), CAediting_196384(85323480, -), CAediting_196385(85323497, -), CAediting_196386(85323522, -), CAediting_196387(85323528, -), CAediting_196388(85323533, -), CAediting_196389(85323540, -), CAediting_196390(85323562, -), CAediting_196391(85323564, -), CAediting_196392(85324157, -), CAediting_196393(85324171, -), CAediting_196394(85324259, -), CAediting_196395(85324273, -), CAediting_196396(85324277, -), CAediting_196397(85324296, -), CAediting_196398(85324298, -), CAediting_196399(85324308, -), CAediting_196400(85324320, -), CAediting_196401(85324337, -), CAediting_196402(85324338, -), CAediting_196403(85324360, -), CAediting_196404(85324381, -), CAediting_196405(85324382, -), CAediting_196406(85324384, -), CAediting_196407(85324394, -),

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RNA editing positional annotations for TGOLN2 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_196287	chr2_85319183_-	UTR3
CAediting_196288	chr2_85319250_-	UTR3
CAediting_196289	chr2_85319254_-	UTR3
CAediting_196290	chr2_85319267_-	UTR3
CAediting_196291	chr2_85319274_-	UTR3
CAediting_196292	chr2_85319275_-	UTR3
CAediting_196293	chr2_85319283_-	UTR3
CAediting_196294	chr2_85319289_-	UTR3
CAediting_196295	chr2_85319306_-	UTR3
CAediting_196296	chr2_85319316_-	UTR3
CAediting_196297	chr2_85319328_-	UTR3
CAediting_196298	chr2_85319334_-	UTR3
CAediting_196299	chr2_85319342_-	UTR3
CAediting_196300	chr2_85319345_-	UTR3
CAediting_196301	chr2_85319346_-	UTR3
CAediting_196302	chr2_85319347_-	UTR3
CAediting_196303	chr2_85319348_-	UTR3
CAediting_196304	chr2_85319349_-	UTR3
CAediting_196305	chr2_85319354_-	UTR3
CAediting_196306	chr2_85319355_-	UTR3
CAediting_196307	chr2_85319371_-	UTR3
CAediting_196308	chr2_85319372_-	UTR3
CAediting_196309	chr2_85319381_-	UTR3
CAediting_196310	chr2_85319391_-	UTR3
CAediting_196311	chr2_85319394_-	UTR3
CAediting_196312	chr2_85319396_-	UTR3
CAediting_196313	chr2_85319404_-	UTR3
CAediting_196314	chr2_85319405_-	UTR3
CAediting_196315	chr2_85319410_-	UTR3
CAediting_196316	chr2_85319413_-	UTR3
CAediting_196317	chr2_85319448_-	UTR3
CAediting_196318	chr2_85319449_-	UTR3
CAediting_196319	chr2_85322984_-	intronic
CAediting_196320	chr2_85323007_-	intronic
CAediting_196321	chr2_85323011_-	intronic
CAediting_196322	chr2_85323013_-	intronic
CAediting_196323	chr2_85323015_-	intronic
CAediting_196324	chr2_85323025_-	intronic
CAediting_196325	chr2_85323030_-	intronic
CAediting_196326	chr2_85323035_-	intronic
CAediting_196327	chr2_85323040_-	intronic
CAediting_196328	chr2_85323043_-	intronic
CAediting_196329	chr2_85323045_-	intronic
CAediting_196330	chr2_85323046_-	intronic
CAediting_196331	chr2_85323050_-	intronic
CAediting_196332	chr2_85323063_-	intronic
CAediting_196333	chr2_85323067_-	intronic
CAediting_196334	chr2_85323074_-	intronic
CAediting_196335	chr2_85323075_-	intronic
CAediting_196336	chr2_85323083_-	intronic
CAediting_196337	chr2_85323093_-	intronic
CAediting_196338	chr2_85323098_-	intronic
CAediting_196339	chr2_85323099_-	intronic
CAediting_196340	chr2_85323102_-	intronic
CAediting_196341	chr2_85323109_-	intronic
CAediting_196342	chr2_85323113_-	intronic
CAediting_196343	chr2_85323118_-	intronic
CAediting_196344	chr2_85323124_-	intronic
CAediting_196345	chr2_85323135_-	intronic
CAediting_196346	chr2_85323136_-	intronic
CAediting_196347	chr2_85323138_-	intronic
CAediting_196348	chr2_85323141_-	intronic
CAediting_196349	chr2_85323143_-	intronic
CAediting_196350	chr2_85323144_-	intronic
CAediting_196351	chr2_85323145_-	intronic
CAediting_196352	chr2_85323146_-	intronic
CAediting_196353	chr2_85323147_-	intronic
CAediting_196354	chr2_85323156_-	intronic
CAediting_196355	chr2_85323161_-	intronic
CAediting_196356	chr2_85323162_-	intronic
CAediting_196357	chr2_85323181_-	intronic
CAediting_196358	chr2_85323186_-	intronic
CAediting_196359	chr2_85323192_-	intronic
CAediting_196360	chr2_85323195_-	intronic
CAediting_196361	chr2_85323200_-	intronic
CAediting_196362	chr2_85323205_-	intronic
CAediting_196363	chr2_85323230_-	intronic
CAediting_196364	chr2_85323231_-	intronic
CAediting_196365	chr2_85323239_-	intronic
CAediting_196366	chr2_85323247_-	intronic
CAediting_196367	chr2_85323249_-	intronic
CAediting_196368	chr2_85323291_-	intronic
CAediting_196369	chr2_85323323_-	intronic
CAediting_196370	chr2_85323331_-	intronic
CAediting_196371	chr2_85323348_-	intronic
CAediting_196372	chr2_85323349_-	intronic
CAediting_196373	chr2_85323361_-	intronic
CAediting_196374	chr2_85323374_-	intronic
CAediting_196375	chr2_85323386_-	intronic
CAediting_196376	chr2_85323398_-	intronic
CAediting_196377	chr2_85323403_-	intronic
CAediting_196378	chr2_85323411_-	intronic
CAediting_196379	chr2_85323417_-	intronic
CAediting_196380	chr2_85323418_-	intronic
CAediting_196381	chr2_85323422_-	intronic
CAediting_196382	chr2_85323454_-	intronic
CAediting_196383	chr2_85323466_-	intronic
CAediting_196384	chr2_85323480_-	intronic
CAediting_196385	chr2_85323497_-	intronic
CAediting_196386	chr2_85323522_-	intronic
CAediting_196387	chr2_85323528_-	intronic
CAediting_196388	chr2_85323533_-	intronic
CAediting_196389	chr2_85323540_-	intronic
CAediting_196390	chr2_85323562_-	intronic
CAediting_196391	chr2_85323564_-	intronic
CAediting_196392	chr2_85324157_-	intronic
CAediting_196393	chr2_85324171_-	intronic
CAediting_196394	chr2_85324259_-	intronic
CAediting_196395	chr2_85324273_-	intronic
CAediting_196396	chr2_85324277_-	intronic
CAediting_196397	chr2_85324296_-	intronic
CAediting_196398	chr2_85324298_-	intronic
CAediting_196399	chr2_85324308_-	intronic
CAediting_196400	chr2_85324320_-	intronic
CAediting_196401	chr2_85324337_-	intronic
CAediting_196402	chr2_85324338_-	intronic
CAediting_196403	chr2_85324360_-	intronic
CAediting_196404	chr2_85324381_-	intronic
CAediting_196405	chr2_85324382_-	intronic
CAediting_196406	chr2_85324384_-	intronic
CAediting_196407	chr2_85324394_-	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_196287	chr2_85319183_-	SINE	Alu	AluSc
CAediting_196288	chr2_85319250_-	SINE	Alu	AluSc
CAediting_196289	chr2_85319254_-	SINE	Alu	AluSc
CAediting_196290	chr2_85319267_-	SINE	Alu	AluSc
CAediting_196291	chr2_85319274_-	SINE	Alu	AluSc
CAediting_196292	chr2_85319275_-	SINE	Alu	AluSc
CAediting_196293	chr2_85319283_-	SINE	Alu	AluSc
CAediting_196294	chr2_85319289_-	SINE	Alu	AluSc
CAediting_196295	chr2_85319306_-	SINE	Alu	AluSc
CAediting_196296	chr2_85319316_-	SINE	Alu	AluSc
CAediting_196297	chr2_85319328_-	SINE	Alu	AluSc
CAediting_196298	chr2_85319334_-	SINE	Alu	AluSc
CAediting_196299	chr2_85319342_-	SINE	Alu	AluSc
CAediting_196300	chr2_85319345_-	SINE	Alu	AluSc
CAediting_196301	chr2_85319346_-	SINE	Alu	AluSc
CAediting_196302	chr2_85319347_-	SINE	Alu	AluSc
CAediting_196303	chr2_85319348_-	SINE	Alu	AluSc
CAediting_196304	chr2_85319349_-	SINE	Alu	AluSc
CAediting_196305	chr2_85319354_-	SINE	Alu	AluSc
CAediting_196306	chr2_85319355_-	SINE	Alu	AluSc
CAediting_196307	chr2_85319371_-	SINE	Alu	AluSc
CAediting_196308	chr2_85319372_-	SINE	Alu	AluSc
CAediting_196309	chr2_85319381_-	SINE	Alu	AluSc
CAediting_196310	chr2_85319391_-	SINE	Alu	AluSc
CAediting_196311	chr2_85319394_-	SINE	Alu	AluSc
CAediting_196312	chr2_85319396_-	SINE	Alu	AluSc
CAediting_196313	chr2_85319404_-	SINE	Alu	AluSc
CAediting_196314	chr2_85319405_-	SINE	Alu	AluSc
CAediting_196315	chr2_85319410_-	SINE	Alu	AluSc
CAediting_196316	chr2_85319413_-	SINE	Alu	AluSc
CAediting_196317	chr2_85319448_-	SINE	Alu	AluSc
CAediting_196318	chr2_85319449_-	SINE	Alu	AluSc
CAediting_196319	chr2_85322984_-	SINE	Alu	AluSx
CAediting_196320	chr2_85323007_-	SINE	Alu	AluSx
CAediting_196321	chr2_85323011_-	SINE	Alu	AluSx
CAediting_196322	chr2_85323013_-	SINE	Alu	AluSx
CAediting_196323	chr2_85323015_-	SINE	Alu	AluSx
CAediting_196324	chr2_85323025_-	SINE	Alu	AluSx
CAediting_196325	chr2_85323030_-	SINE	Alu	AluSx
CAediting_196326	chr2_85323035_-	SINE	Alu	AluSx
CAediting_196327	chr2_85323040_-	SINE	Alu	AluSx
CAediting_196328	chr2_85323043_-	SINE	Alu	AluSx
CAediting_196329	chr2_85323045_-	SINE	Alu	AluSx
CAediting_196330	chr2_85323046_-	SINE	Alu	AluSx
CAediting_196331	chr2_85323050_-	SINE	Alu	AluSx
CAediting_196332	chr2_85323063_-	SINE	Alu	AluSx
CAediting_196333	chr2_85323067_-	SINE	Alu	AluSx
CAediting_196334	chr2_85323074_-	SINE	Alu	AluSx
CAediting_196335	chr2_85323075_-	SINE	Alu	AluSx
CAediting_196336	chr2_85323083_-	SINE	Alu	AluSx
CAediting_196337	chr2_85323093_-	SINE	Alu	AluSx
CAediting_196338	chr2_85323098_-	SINE	Alu	AluSx
CAediting_196339	chr2_85323099_-	SINE	Alu	AluSx
CAediting_196340	chr2_85323102_-	SINE	Alu	AluSx
CAediting_196341	chr2_85323109_-	SINE	Alu	AluSx
CAediting_196342	chr2_85323113_-	SINE	Alu	AluSx
CAediting_196343	chr2_85323118_-	SINE	Alu	AluSx
CAediting_196344	chr2_85323124_-	SINE	Alu	AluSx
CAediting_196345	chr2_85323135_-	SINE	Alu	AluSx
CAediting_196346	chr2_85323136_-	SINE	Alu	AluSx
CAediting_196347	chr2_85323138_-	SINE	Alu	AluSx
CAediting_196348	chr2_85323141_-	SINE	Alu	AluSx
CAediting_196349	chr2_85323143_-	SINE	Alu	AluSx
CAediting_196350	chr2_85323144_-	SINE	Alu	AluSx
CAediting_196351	chr2_85323145_-	SINE	Alu	AluSx
CAediting_196352	chr2_85323146_-	SINE	Alu	AluSx
CAediting_196353	chr2_85323147_-	SINE	Alu	AluSx
CAediting_196354	chr2_85323156_-	SINE	Alu	AluSx
CAediting_196355	chr2_85323161_-	SINE	Alu	AluSx
CAediting_196356	chr2_85323162_-	SINE	Alu	AluSx
CAediting_196357	chr2_85323181_-	SINE	Alu	AluSx
CAediting_196358	chr2_85323186_-	SINE	Alu	AluSx
CAediting_196359	chr2_85323192_-	SINE	Alu	AluSx
CAediting_196360	chr2_85323195_-	SINE	Alu	AluSx
CAediting_196361	chr2_85323200_-	SINE	Alu	AluSx
CAediting_196362	chr2_85323205_-	SINE	Alu	AluSx
CAediting_196363	chr2_85323230_-	SINE	Alu	AluSx
CAediting_196364	chr2_85323231_-	SINE	Alu	AluSx
CAediting_196365	chr2_85323239_-	SINE	Alu	AluSx
CAediting_196366	chr2_85323247_-	SINE	Alu	AluSx
CAediting_196367	chr2_85323249_-	SINE	Alu	AluSx
CAediting_196368	chr2_85323291_-	SINE	Alu	AluSx1
CAediting_196369	chr2_85323323_-	SINE	Alu	AluSx1
CAediting_196370	chr2_85323331_-	SINE	Alu	AluSx1
CAediting_196371	chr2_85323348_-	SINE	Alu	AluSx1
CAediting_196372	chr2_85323349_-	SINE	Alu	AluSx1
CAediting_196373	chr2_85323361_-	SINE	Alu	AluSx1
CAediting_196374	chr2_85323374_-	SINE	Alu	AluSx1
CAediting_196375	chr2_85323386_-	SINE	Alu	AluSx1
CAediting_196376	chr2_85323398_-	SINE	Alu	AluSx1
CAediting_196377	chr2_85323403_-	SINE	Alu	AluSx1
CAediting_196378	chr2_85323411_-	SINE	Alu	AluSx1
CAediting_196379	chr2_85323417_-	SINE	Alu	AluSx1
CAediting_196380	chr2_85323418_-	SINE	Alu	AluSx1
CAediting_196381	chr2_85323422_-	SINE	Alu	AluSx1
CAediting_196382	chr2_85323454_-	SINE	Alu	AluSx1
CAediting_196383	chr2_85323466_-	SINE	Alu	AluSx1
CAediting_196384	chr2_85323480_-	SINE	Alu	AluSx1
CAediting_196385	chr2_85323497_-	SINE	Alu	AluSx1
CAediting_196386	chr2_85323522_-	SINE	Alu	AluSx1
CAediting_196387	chr2_85323528_-	SINE	Alu	AluSx1
CAediting_196388	chr2_85323533_-	SINE	Alu	AluSx1
CAediting_196389	chr2_85323540_-	SINE	Alu	AluSx1
CAediting_196390	chr2_85323562_-	SINE	Alu	AluSx1
CAediting_196391	chr2_85323564_-	SINE	Alu	AluSx1
CAediting_196392	chr2_85324157_-	SINE	Alu	AluSp
CAediting_196393	chr2_85324171_-	SINE	Alu	AluSp
CAediting_196394	chr2_85324259_-	SINE	Alu	AluSp
CAediting_196395	chr2_85324273_-	SINE	Alu	AluSp
CAediting_196396	chr2_85324277_-	SINE	Alu	AluSp
CAediting_196397	chr2_85324296_-	SINE	Alu	AluSp
CAediting_196398	chr2_85324298_-	SINE	Alu	AluSp
CAediting_196399	chr2_85324308_-	SINE	Alu	AluSp
CAediting_196400	chr2_85324320_-	SINE	Alu	AluSp
CAediting_196401	chr2_85324337_-	SINE	Alu	AluSp
CAediting_196402	chr2_85324338_-	SINE	Alu	AluSp
CAediting_196403	chr2_85324360_-	SINE	Alu	AluSp
CAediting_196404	chr2_85324381_-	SINE	Alu	AluSp
CAediting_196405	chr2_85324382_-	SINE	Alu	AluSp
CAediting_196406	chr2_85324384_-	SINE	Alu	AluSp
CAediting_196407	chr2_85324394_-	SINE	Alu	AluSp

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RNA A-to-I editing events in the alternative splicing sites for TGOLN2

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000152291.12.TGOLN2.

Correlation between RNA A-to-I editing and PSI for ENSG00000152291.12.TGOLN2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TGOLN2

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

READ.CAediting_196298.ENSG00000152291.TGOLN2.png
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STAD.CAediting_196299.ENSG00000152291.TGOLN2.png
Soverview

UCEC.CAediting_196299.ENSG00000152291.TGOLN2.png
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Protein coding region RNA A-to-I editings for TGOLN2

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for TGOLN2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_196288	chr2_85319250_-	ENSG00000152291.12	ENST00000282120	hsa-miR-324-3p	85319250	85319256	7mer-m8	85319249	85319271	145.00	-24.59
CAediting_196288	chr2_85319250_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6075	85319245	85319252	8mer-1a	85319245	85319266	150.00	-25.04
CAediting_196288	chr2_85319250_-	ENSG00000152291.12	ENST00000398263	hsa-miR-324-3p	85319250	85319256	7mer-m8	85319249	85319271	145.00	-24.59
CAediting_196288	chr2_85319250_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6075	85319245	85319252	8mer-1a	85319245	85319266	150.00	-25.04
CAediting_196289	chr2_85319254_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6511a-3p	85319249	85319254	6mer	85319248	85319269	140.00	-25.44
CAediting_196289	chr2_85319254_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6511a-3p	85319249	85319254	6mer	85319248	85319269	140.00	-25.44
CAediting_196289	chr2_85319254_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6511a-3p	85319249	85319254	6mer	85319248	85319269	140.00	-25.44
CAediting_196289	chr2_85319254_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6511a-3p	85319249	85319254	6mer	85319248	85319269	140.00	-25.44
CAediting_196289	chr2_85319254_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6511b-3p	85319249	85319254	6mer	85319248	85319270	144.00	-28.32
CAediting_196289	chr2_85319254_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6511b-3p	85319249	85319254	6mer	85319248	85319270	144.00	-28.32
CAediting_196289	chr2_85319254_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6784-3p	85319249	85319254	6mer	85319248	85319270	147.00	-30.55
CAediting_196289	chr2_85319254_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6511a-3p	85319249	85319254	6mer	85319248	85319269	140.00	-25.44
CAediting_196289	chr2_85319254_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6511a-3p	85319249	85319254	6mer	85319248	85319269	140.00	-25.44
CAediting_196289	chr2_85319254_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6511a-3p	85319249	85319254	6mer	85319248	85319269	140.00	-25.44
CAediting_196289	chr2_85319254_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6511a-3p	85319249	85319254	6mer	85319248	85319269	140.00	-25.44
CAediting_196289	chr2_85319254_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6511b-3p	85319249	85319254	6mer	85319248	85319270	144.00	-28.32
CAediting_196289	chr2_85319254_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6511b-3p	85319249	85319254	6mer	85319248	85319270	144.00	-28.32
CAediting_196289	chr2_85319254_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6784-3p	85319249	85319254	6mer	85319248	85319270	147.00	-30.55
CAediting_196292	chr2_85319275_-	ENSG00000152291.12	ENST00000282120	hsa-miR-127-3p	85319270	85319276	7mer-m8	85319269	85319290	142.00	-20.03
CAediting_196292	chr2_85319275_-	ENSG00000152291.12	ENST00000398263	hsa-miR-127-3p	85319270	85319276	7mer-m8	85319269	85319290	142.00	-20.03
CAediting_196297	chr2_85319328_-	ENSG00000152291.12	ENST00000282120	hsa-miR-122-3p	85319325	85319330	6mer	85319324	85319347	141.00	-16.46
CAediting_196297	chr2_85319328_-	ENSG00000152291.12	ENST00000398263	hsa-miR-122-3p	85319325	85319330	6mer	85319324	85319347	141.00	-16.46
CAediting_196301	chr2_85319346_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6844	85319345	85319351	7mer-m8	85319344	85319365	163.00	-7.92
CAediting_196301	chr2_85319346_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6844	85319345	85319351	7mer-m8	85319344	85319365	163.00	-7.92
CAediting_196312	chr2_85319396_-	ENSG00000152291.12	ENST00000282120	hsa-miR-4281	85319391	85319398	8mer-1a	85319391	85319408	141.00	-19.57
CAediting_196312	chr2_85319396_-	ENSG00000152291.12	ENST00000398263	hsa-miR-4281	85319391	85319398	8mer-1a	85319391	85319408	141.00	-19.57
CAediting_196317	chr2_85319448_-	ENSG00000152291.12	ENST00000282120	hsa-miR-365b-5p	85319443	85319449	7mer-1a	85319443	85319463	142.00	-29.18
CAediting_196317	chr2_85319448_-	ENSG00000152291.12	ENST00000282120	hsa-miR-4298	85319443	85319448	6mer	85319442	85319463	140.00	-30.66
CAediting_196317	chr2_85319448_-	ENSG00000152291.12	ENST00000282120	hsa-miR-8052	85319443	85319449	7mer-1a	85319443	85319464	147.00	-27.48
CAediting_196317	chr2_85319448_-	ENSG00000152291.12	ENST00000398263	hsa-miR-365b-5p	85319443	85319449	7mer-1a	85319443	85319463	142.00	-29.18
CAediting_196317	chr2_85319448_-	ENSG00000152291.12	ENST00000398263	hsa-miR-4298	85319443	85319448	6mer	85319442	85319463	140.00	-30.66
CAediting_196317	chr2_85319448_-	ENSG00000152291.12	ENST00000398263	hsa-miR-8052	85319443	85319449	7mer-1a	85319443	85319464	147.00	-27.48
CAediting_196318	chr2_85319449_-	ENSG00000152291.12	ENST00000282120	hsa-miR-513a-5p	85319448	85319454	7mer-m8	85319447	85319463	154.00	-24.04
CAediting_196318	chr2_85319449_-	ENSG00000152291.12	ENST00000282120	hsa-miR-513a-5p	85319448	85319454	7mer-m8	85319447	85319463	154.00	-24.04
CAediting_196318	chr2_85319449_-	ENSG00000152291.12	ENST00000282120	hsa-miR-638	85319443	85319449	7mer-1a	85319443	85319468	154.00	-36.32
CAediting_196318	chr2_85319449_-	ENSG00000152291.12	ENST00000398263	hsa-miR-513a-5p	85319448	85319454	7mer-m8	85319447	85319463	154.00	-24.04
CAediting_196318	chr2_85319449_-	ENSG00000152291.12	ENST00000398263	hsa-miR-513a-5p	85319448	85319454	7mer-m8	85319447	85319463	154.00	-24.04
CAediting_196318	chr2_85319449_-	ENSG00000152291.12	ENST00000398263	hsa-miR-638	85319443	85319449	7mer-1a	85319443	85319468	154.00	-36.32
CAediting_196287	chr2_85319183_-	ENSG00000152291.12	ENST00000282120	hsa-miR-627-3p	85319177	85319184	8mer-1a	85319177	85319196	150.00	-10.66
CAediting_196287	chr2_85319183_-	ENSG00000152291.12	ENST00000398263	hsa-miR-627-3p	85319177	85319184	8mer-1a	85319177	85319196	150.00	-10.66
CAediting_196290	chr2_85319267_-	ENSG00000152291.12	ENST00000282120	hsa-miR-4313	85319264	85319269	6mer	85319263	85319282	142.00	-21.30
CAediting_196290	chr2_85319267_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6840-5p	85319266	85319272	7mer-m8	85319265	85319292	144.00	-29.82
CAediting_196290	chr2_85319267_-	ENSG00000152291.12	ENST00000398263	hsa-miR-4313	85319264	85319269	6mer	85319263	85319282	142.00	-21.30
CAediting_196290	chr2_85319267_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6840-5p	85319266	85319272	7mer-m8	85319265	85319292	144.00	-29.82
CAediting_196293	chr2_85319283_-	ENSG00000152291.12	ENST00000282120	hsa-miR-891b	85319279	85319284	6mer	85319278	85319299	150.00	-18.80
CAediting_196293	chr2_85319283_-	ENSG00000152291.12	ENST00000398263	hsa-miR-891b	85319279	85319284	6mer	85319278	85319299	150.00	-18.80
CAediting_196295	chr2_85319306_-	ENSG00000152291.12	ENST00000282120	hsa-miR-1207-3p	85319306	85319312	7mer-m8	85319305	85319323	145.00	-13.53
CAediting_196295	chr2_85319306_-	ENSG00000152291.12	ENST00000282120	hsa-miR-4524a-5p	85319303	85319309	7mer-m8	85319302	85319323	146.00	-12.87
CAediting_196295	chr2_85319306_-	ENSG00000152291.12	ENST00000282120	hsa-miR-4524b-5p	85319303	85319309	7mer-m8	85319302	85319321	144.00	-10.53
CAediting_196295	chr2_85319306_-	ENSG00000152291.12	ENST00000282120	hsa-miR-646	85319303	85319310	8mer-1a	85319303	85319322	148.00	-20.37
CAediting_196295	chr2_85319306_-	ENSG00000152291.12	ENST00000398263	hsa-miR-1207-3p	85319306	85319312	7mer-m8	85319305	85319323	145.00	-13.53
CAediting_196295	chr2_85319306_-	ENSG00000152291.12	ENST00000398263	hsa-miR-4524a-5p	85319303	85319309	7mer-m8	85319302	85319323	146.00	-12.87
CAediting_196295	chr2_85319306_-	ENSG00000152291.12	ENST00000398263	hsa-miR-4524b-5p	85319303	85319309	7mer-m8	85319302	85319321	144.00	-10.53
CAediting_196295	chr2_85319306_-	ENSG00000152291.12	ENST00000398263	hsa-miR-646	85319303	85319310	8mer-1a	85319303	85319322	148.00	-20.37
CAediting_196296	chr2_85319316_-	ENSG00000152291.12	ENST00000282120	hsa-miR-140-3p	85319314	85319320	7mer-m8	85319313	85319336	151.00	-22.20
CAediting_196296	chr2_85319316_-	ENSG00000152291.12	ENST00000398263	hsa-miR-140-3p	85319314	85319320	7mer-m8	85319313	85319336	151.00	-22.20
CAediting_196302	chr2_85319347_-	ENSG00000152291.12	ENST00000282120	hsa-miR-578	85319345	85319351	7mer-m8	85319344	85319364	145.00	-7.67
CAediting_196302	chr2_85319347_-	ENSG00000152291.12	ENST00000282120	hsa-miR-643	85319346	85319353	8mer-1a	85319346	85319366	141.00	-8.60
CAediting_196302	chr2_85319347_-	ENSG00000152291.12	ENST00000398263	hsa-miR-578	85319345	85319351	7mer-m8	85319344	85319364	145.00	-7.67
CAediting_196302	chr2_85319347_-	ENSG00000152291.12	ENST00000398263	hsa-miR-643	85319346	85319353	8mer-1a	85319346	85319366	141.00	-8.60
CAediting_196303	chr2_85319348_-	ENSG00000152291.12	ENST00000282120	hsa-miR-4742-3p	85319347	85319354	8mer-1a	85319347	85319369	148.00	-9.18
CAediting_196303	chr2_85319348_-	ENSG00000152291.12	ENST00000398263	hsa-miR-4742-3p	85319347	85319354	8mer-1a	85319347	85319369	148.00	-9.18
CAediting_196306	chr2_85319355_-	ENSG00000152291.12	ENST00000282120	hsa-miR-630	85319349	85319356	8mer-1a	85319349	85319369	158.00	-15.14
CAediting_196306	chr2_85319355_-	ENSG00000152291.12	ENST00000398263	hsa-miR-630	85319349	85319356	8mer-1a	85319349	85319369	158.00	-15.14
CAediting_196307	chr2_85319371_-	ENSG00000152291.12	ENST00000282120	hsa-miR-412-3p	85319371	85319377	7mer-m8	85319370	85319392	151.00	-16.53
CAediting_196307	chr2_85319371_-	ENSG00000152291.12	ENST00000282120	hsa-miR-4508	85319366	85319372	7mer-m8	85319365	85319381	140.00	-21.85
CAediting_196307	chr2_85319371_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6754-3p	85319371	85319377	7mer-m8	85319370	85319390	144.00	-15.76
CAediting_196307	chr2_85319371_-	ENSG00000152291.12	ENST00000398263	hsa-miR-412-3p	85319371	85319377	7mer-m8	85319370	85319392	151.00	-16.53
CAediting_196307	chr2_85319371_-	ENSG00000152291.12	ENST00000398263	hsa-miR-4508	85319366	85319372	7mer-m8	85319365	85319381	140.00	-21.85
CAediting_196307	chr2_85319371_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6754-3p	85319371	85319377	7mer-m8	85319370	85319390	144.00	-15.76
CAediting_196309	chr2_85319381_-	ENSG00000152291.12	ENST00000282120	hsa-miR-3190-5p	85319381	85319387	7mer-m8	85319380	85319399	150.00	-18.87
CAediting_196309	chr2_85319381_-	ENSG00000152291.12	ENST00000398263	hsa-miR-3190-5p	85319381	85319387	7mer-m8	85319380	85319399	150.00	-18.87
CAediting_196313	chr2_85319404_-	ENSG00000152291.12	ENST00000282120	hsa-miR-378a-5p	85319402	85319408	7mer-m8	85319401	85319423	157.00	-25.87
CAediting_196313	chr2_85319404_-	ENSG00000152291.12	ENST00000398263	hsa-miR-378a-5p	85319402	85319408	7mer-m8	85319401	85319423	157.00	-25.87
CAediting_196316	chr2_85319413_-	ENSG00000152291.12	ENST00000282120	hsa-miR-10401-3p	85319408	85319413	6mer	85319407	85319426	145.00	-38.91
CAediting_196316	chr2_85319413_-	ENSG00000152291.12	ENST00000282120	hsa-miR-10401-3p	85319408	85319413	6mer	85319407	85319426	145.00	-38.91
CAediting_196316	chr2_85319413_-	ENSG00000152291.12	ENST00000282120	hsa-miR-10401-3p	85319408	85319413	6mer	85319407	85319426	145.00	-38.91
CAediting_196316	chr2_85319413_-	ENSG00000152291.12	ENST00000282120	hsa-miR-10401-3p	85319408	85319413	6mer	85319407	85319426	145.00	-38.91
CAediting_196316	chr2_85319413_-	ENSG00000152291.12	ENST00000398263	hsa-miR-10401-3p	85319408	85319413	6mer	85319407	85319426	145.00	-38.91
CAediting_196316	chr2_85319413_-	ENSG00000152291.12	ENST00000398263	hsa-miR-10401-3p	85319408	85319413	6mer	85319407	85319426	145.00	-38.91
CAediting_196316	chr2_85319413_-	ENSG00000152291.12	ENST00000398263	hsa-miR-10401-3p	85319408	85319413	6mer	85319407	85319426	145.00	-38.91
CAediting_196316	chr2_85319413_-	ENSG00000152291.12	ENST00000398263	hsa-miR-10401-3p	85319408	85319413	6mer	85319407	85319426	145.00	-38.91
CAediting_196308	chr2_85319372_-	ENSG00000152291.12	ENST00000282120	hsa-miR-1229-3p	85319371	85319377	7mer-m8	85319370	85319394	146.00	-16.14
CAediting_196308	chr2_85319372_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6511a-3p	85319371	85319378	8mer-1a	85319371	85319392	145.00	-15.20
CAediting_196308	chr2_85319372_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6511a-3p	85319371	85319378	8mer-1a	85319371	85319392	145.00	-15.20
CAediting_196308	chr2_85319372_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6511a-3p	85319371	85319378	8mer-1a	85319371	85319392	145.00	-15.20
CAediting_196308	chr2_85319372_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6511a-3p	85319371	85319378	8mer-1a	85319371	85319392	145.00	-15.20
CAediting_196308	chr2_85319372_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6511b-3p	85319371	85319378	8mer-1a	85319371	85319393	140.00	-13.68
CAediting_196308	chr2_85319372_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6511b-3p	85319371	85319378	8mer-1a	85319371	85319393	140.00	-13.68
CAediting_196308	chr2_85319372_-	ENSG00000152291.12	ENST00000398263	hsa-miR-1229-3p	85319371	85319377	7mer-m8	85319370	85319394	146.00	-16.14
CAediting_196308	chr2_85319372_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6511a-3p	85319371	85319378	8mer-1a	85319371	85319392	145.00	-15.20
CAediting_196308	chr2_85319372_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6511a-3p	85319371	85319378	8mer-1a	85319371	85319392	145.00	-15.20
CAediting_196308	chr2_85319372_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6511a-3p	85319371	85319378	8mer-1a	85319371	85319392	145.00	-15.20
CAediting_196308	chr2_85319372_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6511a-3p	85319371	85319378	8mer-1a	85319371	85319392	145.00	-15.20
CAediting_196308	chr2_85319372_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6511b-3p	85319371	85319378	8mer-1a	85319371	85319393	140.00	-13.68
CAediting_196308	chr2_85319372_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6511b-3p	85319371	85319378	8mer-1a	85319371	85319393	140.00	-13.68
CAediting_196407	chr2_85324394_-	ENSG00000152291.12	ENST00000444342	hsa-miR-3940-3p	85324390	85324396	7mer-m8	85324389	85324410	143.00	-21.15

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_196317	chr2_85319448_-	ENSG00000152291.12	ENST00000282120	hsa-miR-10399-5p	85319447	85319453	7mer-m8	85319446	85319466	141	-9.84
CAediting_196318	chr2_85319449_-	ENSG00000152291.12	ENST00000282120	hsa-miR-10399-5p	85319447	85319453	7mer-m8	85319446	85319466	141	-9.84
CAediting_196310	chr2_85319391_-	ENSG00000152291.12	ENST00000282120	hsa-miR-1193	85319388	85319394	7mer-m8	85319387	85319412	143	-20.14
CAediting_196290	chr2_85319267_-	ENSG00000152291.12	ENST00000282120	hsa-miR-1281	85319263	85319269	7mer-m8	85319262	85319278	141	-16.88
CAediting_196307	chr2_85319371_-	ENSG00000152291.12	ENST00000282120	hsa-miR-193b-5p	85319367	85319373	7mer-m8	85319366	85319387	142	-20.42
CAediting_196308	chr2_85319372_-	ENSG00000152291.12	ENST00000282120	hsa-miR-193b-5p	85319367	85319373	7mer-m8	85319366	85319387	142	-20.42
CAediting_196294	chr2_85319289_-	ENSG00000152291.12	ENST00000282120	hsa-miR-1976	85319284	85319291	8mer-1a	85319284	85319305	149	-21.45
CAediting_196310	chr2_85319391_-	ENSG00000152291.12	ENST00000282120	hsa-miR-2392	85319387	85319393	7mer-m8	85319386	85319405	142	-17.64
CAediting_196295	chr2_85319306_-	ENSG00000152291.12	ENST00000282120	hsa-miR-325	85319301	85319308	8mer-1a	85319301	85319324	148	-15.48
CAediting_196288	chr2_85319250_-	ENSG00000152291.12	ENST00000282120	hsa-miR-4284	85319247	85319253	7mer-m8	85319246	85319263	151	-17.62
CAediting_196309	chr2_85319381_-	ENSG00000152291.12	ENST00000282120	hsa-miR-4716-5p	85319376	85319382	7mer-m8	85319375	85319396	140	-11.3
CAediting_196299	chr2_85319342_-	ENSG00000152291.12	ENST00000282120	hsa-miR-4735-5p	85319341	85319347	7mer-m8	85319340	85319361	140	-4.28
CAediting_196300	chr2_85319345_-	ENSG00000152291.12	ENST00000282120	hsa-miR-4735-5p	85319341	85319347	7mer-m8	85319340	85319361	140	-4.28
CAediting_196301	chr2_85319346_-	ENSG00000152291.12	ENST00000282120	hsa-miR-4735-5p	85319341	85319347	7mer-m8	85319340	85319361	140	-4.28
CAediting_196309	chr2_85319381_-	ENSG00000152291.12	ENST00000282120	hsa-miR-4781-3p	85319378	85319384	7mer-m8	85319377	85319398	140	-14.54
CAediting_196291	chr2_85319274_-	ENSG00000152291.12	ENST00000282120	hsa-miR-498-5p	85319274	85319280	7mer-m8	85319273	85319295	142	-11.34
CAediting_196292	chr2_85319275_-	ENSG00000152291.12	ENST00000282120	hsa-miR-498-5p	85319274	85319280	7mer-m8	85319273	85319295	142	-11.34
CAediting_196317	chr2_85319448_-	ENSG00000152291.12	ENST00000282120	hsa-miR-5089-5p	85319443	85319449	7mer-m8	85319442	85319463	149	-13.17
CAediting_196293	chr2_85319283_-	ENSG00000152291.12	ENST00000282120	hsa-miR-5571-5p	85319281	85319287	7mer-m8	85319280	85319300	140	-19.3
CAediting_196317	chr2_85319448_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6504-3p	85319447	85319453	7mer-m8	85319446	85319466	149	-14.92
CAediting_196318	chr2_85319449_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6504-3p	85319447	85319453	7mer-m8	85319446	85319466	149	-14.92
CAediting_196294	chr2_85319289_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6747-3p	85319286	85319293	8mer-1a	85319286	85319306	147	-20.44
CAediting_196290	chr2_85319267_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6778-3p	85319264	85319270	7mer-m8	85319263	85319281	151	-18.76
CAediting_196290	chr2_85319267_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6791-3p	85319264	85319269	6mer	85319263	85319282	141	-25.82
CAediting_196310	chr2_85319391_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6843-3p	85319391	85319397	7mer-m8	85319390	85319408	154	-18.98
CAediting_196311	chr2_85319394_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6843-3p	85319391	85319397	7mer-m8	85319390	85319408	154	-18.98
CAediting_196312	chr2_85319396_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6843-3p	85319391	85319397	7mer-m8	85319390	85319408	154	-18.98
CAediting_196310	chr2_85319391_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6848-3p	85319391	85319397	7mer-m8	85319390	85319408	140	-17.57
CAediting_196311	chr2_85319394_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6848-3p	85319391	85319397	7mer-m8	85319390	85319408	140	-17.57
CAediting_196312	chr2_85319396_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6848-3p	85319391	85319397	7mer-m8	85319390	85319408	140	-17.57
CAediting_196298	chr2_85319334_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6872-3p	85319331	85319337	7mer-m8	85319330	85319350	141	-15.02
CAediting_196296	chr2_85319316_-	ENSG00000152291.12	ENST00000282120	hsa-miR-8052	85319310	85319316	7mer-1a	85319310	85319330	149	-25.2
CAediting_196317	chr2_85319448_-	ENSG00000152291.12	ENST00000398263	hsa-miR-10399-5p	85319447	85319453	7mer-m8	85319446	85319466	141	-9.84
CAediting_196318	chr2_85319449_-	ENSG00000152291.12	ENST00000398263	hsa-miR-10399-5p	85319447	85319453	7mer-m8	85319446	85319466	141	-9.84
CAediting_196310	chr2_85319391_-	ENSG00000152291.12	ENST00000398263	hsa-miR-1193	85319388	85319394	7mer-m8	85319387	85319412	143	-20.14
CAediting_196290	chr2_85319267_-	ENSG00000152291.12	ENST00000398263	hsa-miR-1281	85319263	85319269	7mer-m8	85319262	85319278	141	-16.88
CAediting_196307	chr2_85319371_-	ENSG00000152291.12	ENST00000398263	hsa-miR-193b-5p	85319367	85319373	7mer-m8	85319366	85319387	142	-20.42
CAediting_196308	chr2_85319372_-	ENSG00000152291.12	ENST00000398263	hsa-miR-193b-5p	85319367	85319373	7mer-m8	85319366	85319387	142	-20.42
CAediting_196294	chr2_85319289_-	ENSG00000152291.12	ENST00000398263	hsa-miR-1976	85319284	85319291	8mer-1a	85319284	85319305	149	-21.45
CAediting_196310	chr2_85319391_-	ENSG00000152291.12	ENST00000398263	hsa-miR-2392	85319387	85319393	7mer-m8	85319386	85319405	142	-17.64
CAediting_196295	chr2_85319306_-	ENSG00000152291.12	ENST00000398263	hsa-miR-325	85319301	85319308	8mer-1a	85319301	85319324	148	-15.48
CAediting_196288	chr2_85319250_-	ENSG00000152291.12	ENST00000398263	hsa-miR-4284	85319247	85319253	7mer-m8	85319246	85319263	151	-17.62
CAediting_196309	chr2_85319381_-	ENSG00000152291.12	ENST00000398263	hsa-miR-4716-5p	85319376	85319382	7mer-m8	85319375	85319396	140	-11.3
CAediting_196299	chr2_85319342_-	ENSG00000152291.12	ENST00000398263	hsa-miR-4735-5p	85319341	85319347	7mer-m8	85319340	85319361	140	-4.28
CAediting_196300	chr2_85319345_-	ENSG00000152291.12	ENST00000398263	hsa-miR-4735-5p	85319341	85319347	7mer-m8	85319340	85319361	140	-4.28
CAediting_196301	chr2_85319346_-	ENSG00000152291.12	ENST00000398263	hsa-miR-4735-5p	85319341	85319347	7mer-m8	85319340	85319361	140	-4.28
CAediting_196309	chr2_85319381_-	ENSG00000152291.12	ENST00000398263	hsa-miR-4781-3p	85319378	85319384	7mer-m8	85319377	85319398	140	-14.54
CAediting_196291	chr2_85319274_-	ENSG00000152291.12	ENST00000398263	hsa-miR-498-5p	85319274	85319280	7mer-m8	85319273	85319295	142	-11.34
CAediting_196292	chr2_85319275_-	ENSG00000152291.12	ENST00000398263	hsa-miR-498-5p	85319274	85319280	7mer-m8	85319273	85319295	142	-11.34
CAediting_196317	chr2_85319448_-	ENSG00000152291.12	ENST00000398263	hsa-miR-5089-5p	85319443	85319449	7mer-m8	85319442	85319463	149	-13.17
CAediting_196293	chr2_85319283_-	ENSG00000152291.12	ENST00000398263	hsa-miR-5571-5p	85319281	85319287	7mer-m8	85319280	85319300	140	-19.3
CAediting_196317	chr2_85319448_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6504-3p	85319447	85319453	7mer-m8	85319446	85319466	149	-14.92
CAediting_196318	chr2_85319449_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6504-3p	85319447	85319453	7mer-m8	85319446	85319466	149	-14.92
CAediting_196294	chr2_85319289_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6747-3p	85319286	85319293	8mer-1a	85319286	85319306	147	-20.44
CAediting_196290	chr2_85319267_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6778-3p	85319264	85319270	7mer-m8	85319263	85319281	151	-18.76
CAediting_196290	chr2_85319267_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6791-3p	85319264	85319269	6mer	85319263	85319282	141	-25.82
CAediting_196310	chr2_85319391_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6843-3p	85319391	85319397	7mer-m8	85319390	85319408	154	-18.98
CAediting_196311	chr2_85319394_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6843-3p	85319391	85319397	7mer-m8	85319390	85319408	154	-18.98
CAediting_196312	chr2_85319396_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6843-3p	85319391	85319397	7mer-m8	85319390	85319408	154	-18.98
CAediting_196310	chr2_85319391_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6848-3p	85319391	85319397	7mer-m8	85319390	85319408	140	-17.57
CAediting_196311	chr2_85319394_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6848-3p	85319391	85319397	7mer-m8	85319390	85319408	140	-17.57
CAediting_196312	chr2_85319396_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6848-3p	85319391	85319397	7mer-m8	85319390	85319408	140	-17.57
CAediting_196298	chr2_85319334_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6872-3p	85319331	85319337	7mer-m8	85319330	85319350	141	-15.02
CAediting_196296	chr2_85319316_-	ENSG00000152291.12	ENST00000398263	hsa-miR-8052	85319310	85319316	7mer-1a	85319310	85319330	149	-25.2
CAediting_196407	chr2_85324394_-	ENSG00000152291.12	ENST00000444342	hsa-miR-5189-5p	85324393	85324399	7mer-m8	85324392	85324415	154	-22.58
CAediting_196407	chr2_85324394_-	ENSG00000152291.12	ENST00000444342	hsa-miR-612	85324393	85324399	7mer-m8	85324392	85324417	154	-25.9
CAediting_196407	chr2_85324394_-	ENSG00000152291.12	ENST00000444342	hsa-miR-661	85324391	85324397	7mer-m8	85324390	85324413	143	-18.8
CAediting_196407	chr2_85324394_-	ENSG00000152291.12	ENST00000444342	hsa-miR-6860	85324393	85324399	7mer-m8	85324392	85324413	141	-16.19
CAediting_196407	chr2_85324394_-	ENSG00000152291.12	ENST00000444342	hsa-miR-939-3p	85324392	85324398	7mer-m8	85324391	85324411	140	-15.63

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000152291.12	ENST00000282120	hsa-miR-605-3p	85320097	85320103	7mer-m8	85320096	85320117	148	-19.89
CAediting_688081	chr9_63819627_+	ENSG00000152291.12	ENST00000282120	hsa-miR-4477b	85320632	85320639	8mer-1a	85320632	85320653	140	-9.65
CAediting_688081	chr9_63819627_+	ENSG00000152291.12	ENST00000282120	hsa-miR-4477b	85319862	85319868	7mer-m8	85319861	85319882	149	-12.99
CAediting_748296	chr10_51299626_+	ENSG00000152291.12	ENST00000398263	hsa-miR-605-3p	85320097	85320103	7mer-m8	85320096	85320117	148	-19.89
CAediting_688081	chr9_63819627_+	ENSG00000152291.12	ENST00000398263	hsa-miR-4477b	85320632	85320639	8mer-1a	85320632	85320653	140	-9.65
CAediting_688081	chr9_63819627_+	ENSG00000152291.12	ENST00000398263	hsa-miR-4477b	85319862	85319868	7mer-m8	85319861	85319882	149	-12.99
CAediting_1054808	chr15_66496985_-	ENSG00000152291.12	ENST00000282120	hsa-miR-4512	85320141	85320147	7mer-m8	85320140	85320161	140	-15.34
CAediting_1229415	chr17_67471547_+	ENSG00000152291.12	ENST00000282120	hsa-miR-548aa	85320866	85320872	7mer-m8	85320865	85320889	140	-9.35
CAediting_1351755	chr19_40282625_-	ENSG00000152291.12	ENST00000282120	hsa-miR-641	85320786	85320791	6mer	85320785	85320809	140	-15.79
CAediting_1368054	chr19_46709310_-	ENSG00000152291.12	ENST00000282120	hsa-miR-320e	85321076	85321082	7mer-m8	85321075	85321091	145	-16.93
CAediting_1368054	chr19_46709310_-	ENSG00000152291.12	ENST00000282120	hsa-miR-320e	85319945	85319950	6mer	85319935	85319951	148	-19.65
CAediting_1368054	chr19_46709310_-	ENSG00000152291.12	ENST00000282120	hsa-miR-320e	85319936	85319942	7mer-m8	85319935	85319951	148	-19.65
CAediting_77128	chr1_85133844_+	ENSG00000152291.12	ENST00000282120	hsa-miR-4423-3p	85321089	85321095	7mer-m8	85321088	85321111	156	-19.15
CAediting_77128	chr1_85133844_+	ENSG00000152291.12	ENST00000282120	hsa-miR-4423-3p	85320125	85320131	7mer-m8	85320124	85320144	153	-19.72
CAediting_604450	chr7_133034877_-	ENSG00000152291.12	ENST00000282120	hsa-miR-3654	85320325	85320331	7mer-m8	85320324	85320342	147	-16.79
CAediting_1054808	chr15_66496985_-	ENSG00000152291.12	ENST00000398263	hsa-miR-4512	85320141	85320147	7mer-m8	85320140	85320161	140	-15.34
CAediting_1229415	chr17_67471547_+	ENSG00000152291.12	ENST00000398263	hsa-miR-548aa	85320866	85320872	7mer-m8	85320865	85320889	140	-9.35
CAediting_1351755	chr19_40282625_-	ENSG00000152291.12	ENST00000398263	hsa-miR-641	85320786	85320791	6mer	85320785	85320809	140	-15.79
CAediting_1368054	chr19_46709310_-	ENSG00000152291.12	ENST00000398263	hsa-miR-320e	85321076	85321082	7mer-m8	85321075	85321091	145	-16.93
CAediting_1368054	chr19_46709310_-	ENSG00000152291.12	ENST00000398263	hsa-miR-320e	85319945	85319950	6mer	85319935	85319951	148	-19.65
CAediting_1368054	chr19_46709310_-	ENSG00000152291.12	ENST00000398263	hsa-miR-320e	85319936	85319942	7mer-m8	85319935	85319951	148	-19.65
CAediting_77128	chr1_85133844_+	ENSG00000152291.12	ENST00000398263	hsa-miR-4423-3p	85321089	85321095	7mer-m8	85321088	85321111	156	-19.15
CAediting_77128	chr1_85133844_+	ENSG00000152291.12	ENST00000398263	hsa-miR-4423-3p	85320125	85320131	7mer-m8	85320124	85320144	153	-19.72
CAediting_604450	chr7_133034877_-	ENSG00000152291.12	ENST00000398263	hsa-miR-3654	85320325	85320331	7mer-m8	85320324	85320342	147	-16.79
CAediting_468389	chr6_31355314_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6891-5p	85322440	85322446	7mer-m8	85322439	85322460	155	-27.33
CAediting_468389	chr6_31355314_-	ENSG00000152291.12	ENST00000282120	hsa-miR-6891-5p	85322568	85322574	7mer-m8	85322567	85322585	147	-17.66
CAediting_468389	chr6_31355314_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6891-5p	85322568	85322574	7mer-m8	85322567	85322585	147	-17.66
CAediting_468389	chr6_31355314_-	ENSG00000152291.12	ENST00000398263	hsa-miR-6891-5p	85322440	85322446	7mer-m8	85322439	85322460	155	-27.33
CAediting_468389	chr6_31355314_-	ENSG00000152291.12	ENST00000409232	hsa-miR-6891-5p	85322568	85322574	7mer-m8	85322567	85322585	147	-17.66
CAediting_468389	chr6_31355314_-	ENSG00000152291.12	ENST00000409232	hsa-miR-6891-5p	85322440	85322446	7mer-m8	85322439	85322460	155	-27.33
CAediting_468389	chr6_31355314_-	ENSG00000152291.12	ENST00000409015	hsa-miR-6891-5p	85322568	85322574	7mer-m8	85322567	85322585	147	-17.66
CAediting_468389	chr6_31355314_-	ENSG00000152291.12	ENST00000409015	hsa-miR-6891-5p	85322440	85322446	7mer-m8	85322439	85322460	155	-27.33

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_846604	chr11_93733708_-	ENSG00000152291.12	ENST00000282120	hsa-miR-1304-3p	85321958	85321964	7mer-m8	85321957	85321975	144	-21.34
CAediting_1368054	chr19_46709310_-	ENSG00000152291.12	ENST00000282120	hsa-miR-320e	85320323	85320329	7mer-m8	85320322	85320339	152	-15.79
CAediting_1368054	chr19_46709310_-	ENSG00000152291.12	ENST00000282120	hsa-miR-320e	85320084	85320090	7mer-m8	85320083	85320103	149	-19.21
CAediting_604450	chr7_133034877_-	ENSG00000152291.12	ENST00000282120	hsa-miR-3654	85320989	85320995	7mer-1a	85320989	85321007	140	-18.17
CAediting_1524209	chrX_134546392_-	ENSG00000152291.12	ENST00000282120	hsa-miR-503-5p	85322364	85322370	7mer-m8	85322363	85322385	148	-23.91
CAediting_748296	chr10_51299626_+	ENSG00000152291.12	ENST00000282120	hsa-miR-605-3p	85321133	85321139	7mer-m8	85321132	85321155	143	-14.52
CAediting_980496	chr14_31014685_-	ENSG00000152291.12	ENST00000282120	hsa-miR-624-3p	85322641	85322647	7mer-m8	85322640	85322660	143	-9.63
CAediting_1351755	chr19_40282625_-	ENSG00000152291.12	ENST00000282120	hsa-miR-641	85319876	85319882	7mer-m8	85319875	85319898	153	-14.74
CAediting_846604	chr11_93733708_-	ENSG00000152291.12	ENST00000398263	hsa-miR-1304-3p	85321958	85321964	7mer-m8	85321957	85321975	144	-21.34
CAediting_1368054	chr19_46709310_-	ENSG00000152291.12	ENST00000398263	hsa-miR-320e	85320323	85320329	7mer-m8	85320322	85320339	152	-15.79
CAediting_1368054	chr19_46709310_-	ENSG00000152291.12	ENST00000398263	hsa-miR-320e	85320084	85320090	7mer-m8	85320083	85320103	149	-19.21
CAediting_1368054	chr19_46709310_-	ENSG00000152291.12	ENST00000398263	hsa-miR-320e	85322668	85322673	6mer	85322667	85322684	143	-19.28
CAediting_604450	chr7_133034877_-	ENSG00000152291.12	ENST00000398263	hsa-miR-3654	85320989	85320995	7mer-1a	85320989	85321007	140	-18.17
CAediting_1524209	chrX_134546392_-	ENSG00000152291.12	ENST00000398263	hsa-miR-503-5p	85322364	85322370	7mer-m8	85322363	85322385	148	-23.91
CAediting_748296	chr10_51299626_+	ENSG00000152291.12	ENST00000398263	hsa-miR-605-3p	85321133	85321139	7mer-m8	85321132	85321155	143	-14.52
CAediting_980496	chr14_31014685_-	ENSG00000152291.12	ENST00000398263	hsa-miR-624-3p	85322641	85322647	7mer-m8	85322640	85322660	143	-9.63
CAediting_1351755	chr19_40282625_-	ENSG00000152291.12	ENST00000398263	hsa-miR-641	85319876	85319882	7mer-m8	85319875	85319898	153	-14.74

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TGOLN2

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000282120.5	protein_coding
ENST00000377386.6	protein_coding
ENST00000398263.5	protein_coding
ENST00000444342.2	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_196287	ENST00000282120.5	chr2_85319183_-	-2047.50	-2047.40	-2083.60
CAediting_196288	ENST00000282120.5	chr2_85319250_-	-2048.70	-2047.40	-2083.60
CAediting_196289	ENST00000282120.5	chr2_85319254_-	-2046.70	-2047.40	-2083.60
CAediting_196290	ENST00000282120.5	chr2_85319267_-	-2047.40	-2047.40	-2083.60
CAediting_196291	ENST00000282120.5	chr2_85319274_-	-2047.40	-2047.40	-2083.60
CAediting_196292	ENST00000282120.5	chr2_85319275_-	-2047.40	-2047.40	-2083.60
CAediting_196293	ENST00000282120.5	chr2_85319283_-	-2047.90	-2047.40	-2083.60
CAediting_196294	ENST00000282120.5	chr2_85319289_-	-2047.60	-2047.40	-2083.60
CAediting_196295	ENST00000282120.5	chr2_85319306_-	-2047.50	-2047.40	-2083.60
CAediting_196296	ENST00000282120.5	chr2_85319316_-	-2047.10	-2047.40	-2083.60
CAediting_196297	ENST00000282120.5	chr2_85319328_-	-2047.10	-2047.40	-2083.60
CAediting_196298	ENST00000282120.5	chr2_85319334_-	-2045.60	-2047.40	-2083.60
CAediting_196299	ENST00000282120.5	chr2_85319342_-	-2048.10	-2047.40	-2083.60
CAediting_196300	ENST00000282120.5	chr2_85319345_-	-2047.90	-2047.40	-2083.60
CAediting_196301	ENST00000282120.5	chr2_85319346_-	-2049.10	-2047.40	-2083.60
CAediting_196302	ENST00000282120.5	chr2_85319347_-	-2047.40	-2047.40	-2083.60
CAediting_196303	ENST00000282120.5	chr2_85319348_-	-2047.40	-2047.40	-2083.60
CAediting_196304	ENST00000282120.5	chr2_85319349_-	-2047.40	-2047.40	-2083.60
CAediting_196305	ENST00000282120.5	chr2_85319354_-	-2047.50	-2047.40	-2083.60
CAediting_196306	ENST00000282120.5	chr2_85319355_-	-2047.50	-2047.40	-2083.60
CAediting_196307	ENST00000282120.5	chr2_85319371_-	-2047.40	-2047.40	-2083.60
CAediting_196308	ENST00000282120.5	chr2_85319372_-	-2048.30	-2047.40	-2083.60
CAediting_196309	ENST00000282120.5	chr2_85319381_-	-2047.50	-2047.40	-2083.60
CAediting_196310	ENST00000282120.5	chr2_85319391_-	-2051.20	-2047.40	-2083.60
CAediting_196311	ENST00000282120.5	chr2_85319394_-	-2050.10	-2047.40	-2083.60
CAediting_196312	ENST00000282120.5	chr2_85319396_-	-2050.70	-2047.40	-2083.60
CAediting_196313	ENST00000282120.5	chr2_85319404_-	-2053.80	-2047.40	-2083.60
CAediting_196314	ENST00000282120.5	chr2_85319405_-	-2049.40	-2047.40	-2083.60
CAediting_196315	ENST00000282120.5	chr2_85319410_-	-2052.90	-2047.40	-2083.60
CAediting_196316	ENST00000282120.5	chr2_85319413_-	-2048.60	-2047.40	-2083.60
CAediting_196317	ENST00000282120.5	chr2_85319448_-	-2050.10	-2047.40	-2083.60
CAediting_196318	ENST00000282120.5	chr2_85319449_-	-2053.80	-2047.40	-2083.60
CAediting_196287	ENST00000377386.6	chr2_85319183_-	-2092.20	-2092.20	-2128.40
CAediting_196288	ENST00000377386.6	chr2_85319250_-	-2093.50	-2092.20	-2128.40
CAediting_196289	ENST00000377386.6	chr2_85319254_-	-2091.50	-2092.20	-2128.40
CAediting_196290	ENST00000377386.6	chr2_85319267_-	-2092.20	-2092.20	-2128.40
CAediting_196291	ENST00000377386.6	chr2_85319274_-	-2092.20	-2092.20	-2128.40
CAediting_196292	ENST00000377386.6	chr2_85319275_-	-2092.20	-2092.20	-2128.40
CAediting_196293	ENST00000377386.6	chr2_85319283_-	-2092.70	-2092.20	-2128.40
CAediting_196294	ENST00000377386.6	chr2_85319289_-	-2092.60	-2092.20	-2128.40
CAediting_196295	ENST00000377386.6	chr2_85319306_-	-2092.20	-2092.20	-2128.40
CAediting_196296	ENST00000377386.6	chr2_85319316_-	-2091.90	-2092.20	-2128.40
CAediting_196297	ENST00000377386.6	chr2_85319328_-	-2091.90	-2092.20	-2128.40
CAediting_196298	ENST00000377386.6	chr2_85319334_-	-2090.40	-2092.20	-2128.40
CAediting_196299	ENST00000377386.6	chr2_85319342_-	-2092.20	-2092.20	-2128.40
CAediting_196300	ENST00000377386.6	chr2_85319345_-	-2092.20	-2092.20	-2128.40
CAediting_196301	ENST00000377386.6	chr2_85319346_-	-2094.10	-2092.20	-2128.40
CAediting_196302	ENST00000377386.6	chr2_85319347_-	-2092.20	-2092.20	-2128.40
CAediting_196303	ENST00000377386.6	chr2_85319348_-	-2092.20	-2092.20	-2128.40
CAediting_196304	ENST00000377386.6	chr2_85319349_-	-2092.20	-2092.20	-2128.40
CAediting_196305	ENST00000377386.6	chr2_85319354_-	-2092.20	-2092.20	-2128.40
CAediting_196306	ENST00000377386.6	chr2_85319355_-	-2092.20	-2092.20	-2128.40
CAediting_196307	ENST00000377386.6	chr2_85319371_-	-2091.70	-2092.20	-2128.40
CAediting_196308	ENST00000377386.6	chr2_85319372_-	-2093.30	-2092.20	-2128.40
CAediting_196309	ENST00000377386.6	chr2_85319381_-	-2092.20	-2092.20	-2128.40
CAediting_196310	ENST00000377386.6	chr2_85319391_-	-2093.30	-2092.20	-2128.40
CAediting_196311	ENST00000377386.6	chr2_85319394_-	-2095.10	-2092.20	-2128.40
CAediting_196312	ENST00000377386.6	chr2_85319396_-	-2093.10	-2092.20	-2128.40
CAediting_196313	ENST00000377386.6	chr2_85319404_-	-2098.80	-2092.20	-2128.40
CAediting_196314	ENST00000377386.6	chr2_85319405_-	-2091.90	-2092.20	-2128.40
CAediting_196315	ENST00000377386.6	chr2_85319410_-	-2094.60	-2092.20	-2128.40
CAediting_196316	ENST00000377386.6	chr2_85319413_-	-2091.80	-2092.20	-2128.40
CAediting_196317	ENST00000377386.6	chr2_85319448_-	-2092.50	-2092.20	-2128.40
CAediting_196318	ENST00000377386.6	chr2_85319449_-	-2095.50	-2092.20	-2128.40
CAediting_196287	ENST00000398263.5	chr2_85319183_-	-1954.30	-1954.20	-1986.40
CAediting_196288	ENST00000398263.5	chr2_85319250_-	-1955.50	-1954.20	-1986.40
CAediting_196289	ENST00000398263.5	chr2_85319254_-	-1953.50	-1954.20	-1986.40
CAediting_196290	ENST00000398263.5	chr2_85319267_-	-1954.20	-1954.20	-1986.40
CAediting_196291	ENST00000398263.5	chr2_85319274_-	-1954.20	-1954.20	-1986.40
CAediting_196292	ENST00000398263.5	chr2_85319275_-	-1954.20	-1954.20	-1986.40
CAediting_196293	ENST00000398263.5	chr2_85319283_-	-1954.70	-1954.20	-1986.40
CAediting_196294	ENST00000398263.5	chr2_85319289_-	-1954.20	-1954.20	-1986.40
CAediting_196295	ENST00000398263.5	chr2_85319306_-	-1954.20	-1954.20	-1986.40
CAediting_196296	ENST00000398263.5	chr2_85319316_-	-1953.90	-1954.20	-1986.40
CAediting_196297	ENST00000398263.5	chr2_85319328_-	-1953.90	-1954.20	-1986.40
CAediting_196298	ENST00000398263.5	chr2_85319334_-	-1952.40	-1954.20	-1986.40
CAediting_196299	ENST00000398263.5	chr2_85319342_-	-1954.20	-1954.20	-1986.40
CAediting_196300	ENST00000398263.5	chr2_85319345_-	-1954.70	-1954.20	-1986.40
CAediting_196301	ENST00000398263.5	chr2_85319346_-	-1954.20	-1954.20	-1986.40
CAediting_196302	ENST00000398263.5	chr2_85319347_-	-1954.20	-1954.20	-1986.40
CAediting_196303	ENST00000398263.5	chr2_85319348_-	-1954.20	-1954.20	-1986.40
CAediting_196304	ENST00000398263.5	chr2_85319349_-	-1954.20	-1954.20	-1986.40
CAediting_196305	ENST00000398263.5	chr2_85319354_-	-1954.30	-1954.20	-1986.40
CAediting_196306	ENST00000398263.5	chr2_85319355_-	-1954.30	-1954.20	-1986.40
CAediting_196307	ENST00000398263.5	chr2_85319371_-	-1954.20	-1954.20	-1986.40
CAediting_196308	ENST00000398263.5	chr2_85319372_-	-1954.20	-1954.20	-1986.40
CAediting_196309	ENST00000398263.5	chr2_85319381_-	-1954.20	-1954.20	-1986.40
CAediting_196310	ENST00000398263.5	chr2_85319391_-	-1958.00	-1954.20	-1986.40
CAediting_196311	ENST00000398263.5	chr2_85319394_-	-1954.70	-1954.20	-1986.40
CAediting_196312	ENST00000398263.5	chr2_85319396_-	-1957.50	-1954.20	-1986.40
CAediting_196313	ENST00000398263.5	chr2_85319404_-	-1957.40	-1954.20	-1986.40
CAediting_196314	ENST00000398263.5	chr2_85319405_-	-1956.20	-1954.20	-1986.40
CAediting_196315	ENST00000398263.5	chr2_85319410_-	-1959.70	-1954.20	-1986.40
CAediting_196316	ENST00000398263.5	chr2_85319413_-	-1955.40	-1954.20	-1986.40
CAediting_196317	ENST00000398263.5	chr2_85319448_-	-1954.50	-1954.20	-1986.40
CAediting_196318	ENST00000398263.5	chr2_85319449_-	-1960.60	-1954.20	-1986.40
CAediting_196407	ENST00000444342.2	chr2_85324394_-	-619.70	-613.50	-619.70

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Relation with ADAR for TGOLN2

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_196297	chr2_85319328_-	.	.	0.00229993057165587	0.336145585751992	.	.
BRCA	CAediting_196298	chr2_85319334_-	.	.	.	.	0.0164189491757618	0.101361220718207
THCA	CAediting_196298	chr2_85319334_-	.	.	.	.	0.0418372752948966	0.122817711496241
LAML	CAediting_196298	chr2_85319334_-	.	.	0.000232709863527878	0.432210479261	.	.
SARC	CAediting_196298	chr2_85319334_-	.	.	.	.	0.000700274702250643	0.321202324067594
OV	CAediting_196299	chr2_85319342_-	.	.	.	.	0.0368341962468644	0.190813227127377
STAD	CAediting_196327	chr2_85323040_-	.	.	0.0350297370422651	0.258012571438138	.	.
BRCA	CAediting_196338	chr2_85323098_-	0.00147611607000614	0.176200172542601	.	.	.	.
LUSC	CAediting_196338	chr2_85323098_-	.	.	0.0466923563148658	0.196473005246219	.	.
STAD	CAediting_196338	chr2_85323098_-	.	.	0.00483677340308366	0.279642069958401	.	.
BRCA	CAediting_196340	chr2_85323102_-	0.0413539986259671	0.107727328111329	.	.	.	.
KIRP	CAediting_196340	chr2_85323102_-	.	.	.	.	0.0433089806635214	0.247670165260888
STAD	CAediting_196380	chr2_85323418_-	.	.	.	.	0.0305914729618588	0.264427222859059
BRCA	CAediting_196383	chr2_85323466_-	0.0100495157815808	0.219248288822748	.	.	.	.
STAD	CAediting_196383	chr2_85323466_-	0.028415755776639	0.162931529932343	.	.	0.00931749119776042	0.192788961241592
ESCA	CAediting_196383	chr2_85323466_-	.	.	0.0447712401342441	0.218267453343491	.	.
OV	CAediting_196383	chr2_85323466_-	0.0154400278595149	0.16201927750949	.	.	.	.

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Relation with cancer stages for TGOLN2

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	clinical_stage	CAediting_196374	chr2_85323374_-	0.046586501817689	-0.401630856585354
ESCA	clinical_stage	CAediting_196383	chr2_85323466_-	0.0363095382210168	-0.429295722268931
HNSC	clinical_stage	CAediting_196298	chr2_85319334_-	0.0476013630535336	0.20167366169833
HNSC	pathologic_stage	CAediting_196298	chr2_85319334_-	0.0336658678272706	0.234875967889772
KIRC	pathologic_stage	CAediting_196338	chr2_85323098_-	0.000384504423790615	0.251136669121457
KIRC	pathologic_stage	CAediting_196340	chr2_85323102_-	2.92828562347032e-09	0.393423601693538
KIRC	pathologic_stage	CAediting_196383	chr2_85323466_-	0.00207635047579423	0.302918911536607
KIRP	clinical_stage	CAediting_196340	chr2_85323102_-	0.0135723265627394	0.407733293805658

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Relation with survival for TGOLN2

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
SARC	CAediting_196298	chr2_85319334_-	6.64733167354825e-05	3.16706e-05	2131420000

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RelatedDrugs for TGOLN2

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for TGOLN2

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
TGOLN2	C0040128	Thyroid Diseases	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene