CAeditome Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: CENPC (CAeditome ID:1060)

Gene summary for CENPC

check button Gene summary
Gene informationGene symbol

CENPC

Gene ID

1060

Gene namecentromere protein C
SynonymsCENP-C|CENPC1|MIF2|hcp-4
Cytomap

4q13.2

Type of geneprotein-coding
Descriptioncentromere protein CCENP-C 1centromere autoantigen Ccentromere autoantigen C1centromere protein C 1interphase centromere complex protein 7
Modification date20210518
UniProtAcc

Q03188

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
CENPC

GO:0000776

Centromere protein C

21529714

CENPC

GO:0000779

Centromere protein C

11682612

CENPC

GO:0005654

Centromere protein C

0000052

CENPC

GO:0005721

Centromere protein C

21529714

CENPC

GO:0016604

Centromere protein C

0000052

CENPC

GO:0030496

Centromere protein C

0000052


Top

RNA A-to-I events for CENPC

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000145241.9
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_366615(67469348, -), CAediting_366616(67469354, -), CAediting_366617(67469355, -), CAediting_366618(67469356, -), CAediting_366619(67469358, -), CAediting_366620(67469359, -), CAediting_366621(67469361, -), CAediting_366622(67469362, -), CAediting_366623(67469363, -), CAediting_366624(67469376, -), CAediting_366625(67469377, -), CAediting_366626(67469385, -), CAediting_366627(67469399, -), CAediting_366628(67469409, -), CAediting_366629(67469412, -), CAediting_366630(67469414, -), CAediting_366631(67469415, -), CAediting_366632(67469419, -), CAediting_366633(67469434, -), CAediting_366634(67469436, -), CAediting_366635(67469443, -), CAediting_366636(67469444, -), CAediting_366637(67469452, -), CAediting_366638(67469453, -), CAediting_366639(67469455, -), CAediting_366640(67469458, -), CAediting_366641(67469462, -), CAediting_366642(67469468, -), CAediting_366643(67469470, -), CAediting_366644(67469474, -), CAediting_366645(67469483, -), CAediting_366646(67469484, -), CAediting_366647(67469494, -), CAediting_366648(67469499, -), CAediting_366649(67469502, -), CAediting_366650(67469510, -), CAediting_366651(67469514, -), CAediting_366652(67469515, -), CAediting_366653(67469517, -), CAediting_366654(67469521, -), CAediting_366655(67469522, -), CAediting_366656(67469523, -), CAediting_366657(67469524, -), CAediting_366658(67469527, -), CAediting_366659(67469539, -), CAediting_366660(67469540, -), CAediting_366661(67469548, -), CAediting_366662(67469549, -), CAediting_366663(67469558, -), CAediting_366664(67469563, -), CAediting_366665(67469572, -), CAediting_366666(67469593, -), CAediting_366667(67469607, -), CAediting_366668(67469609, -), CAediting_366669(67469610, -), CAediting_366670(67469615, -), CAediting_366671(67469616, -), CAediting_366672(67469624, -), CAediting_366673(67469650, -), CAediting_366674(67469652, -), CAediting_366675(67469653, -), CAediting_366676(67469654, -), CAediting_366677(67469656, -), CAediting_366678(67469658, -), CAediting_366679(67469666, -), CAediting_366680(67470312, -), CAediting_366681(67470326, -), CAediting_366682(67470327, -), CAediting_366683(67470328, -), CAediting_366684(67470336, -), CAediting_366685(67470341, -), CAediting_366686(67470345, -), CAediting_366687(67470349, -), CAediting_366688(67470360, -), CAediting_366689(67470367, -), CAediting_366690(67470392, -), CAediting_366691(67470398, -), CAediting_366692(67470400, -), CAediting_366693(67470404, -), CAediting_366694(67470406, -), CAediting_366695(67470409, -), CAediting_366696(67470434, -), CAediting_366697(67470450, -), CAediting_366698(67470460, -), CAediting_366699(67470463, -), CAediting_366700(67470472, -), CAediting_366701(67470486, -), CAediting_366702(67470489, -), CAediting_366703(67470509, -), CAediting_366704(67470510, -), CAediting_366705(67470515, -), CAediting_366706(67470525, -), CAediting_366707(67470559, -), CAediting_366708(67470565, -), CAediting_366709(67470567, -), CAediting_366710(67470867, -), CAediting_366711(67473582, -), CAediting_366712(67473613, -), CAediting_366713(67474098, -), CAediting_366714(67474122, -), CAediting_366715(67474125, -), CAediting_366716(67474132, -), CAediting_366717(67474161, -), CAediting_366718(67474162, -), CAediting_366719(67474170, -), CAediting_366720(67474176, -), CAediting_366721(67474193, -), CAediting_366722(67474270, -), CAediting_366723(67474315, -), CAediting_366724(67474329, -), CAediting_366725(67474337, -), CAediting_366726(67474447, -), CAediting_366727(67474491, -), CAediting_366728(67474496, -), CAediting_366729(67474532, -), CAediting_366730(67474535, -), CAediting_366731(67474541, -), CAediting_366732(67474586, -), CAediting_366733(67474598, -), CAediting_366734(67474616, -), CAediting_366735(67474690, -), CAediting_366736(67475621, -), CAediting_366737(67475695, -), CAediting_366738(67483275, -), CAediting_366739(67483296, -), CAediting_366740(67483306, -), CAediting_366741(67483346, -), CAediting_366742(67483348, -), CAediting_366743(67483350, -), CAediting_366744(67484598, -), CAediting_366745(67497611, -), CAediting_366746(67497621, -), CAediting_366747(67497715, -), CAediting_366748(67517238, -), CAediting_366749(67517300, -), CAediting_366750(67517308, -), CAediting_366751(67517365, -), CAediting_366752(67517716, -), CAediting_366753(67521752, -), CAediting_366754(67523279, -), CAediting_366755(67527591, -), CAediting_366756(67527592, -), CAediting_366757(67527603, -), CAediting_366758(67527622, -), CAediting_366759(67527629, -), CAediting_366760(67527639, -), CAediting_366761(67527668, -), CAediting_366762(67527677, -), CAediting_366763(67527696, -), CAediting_366764(67527700, -), CAediting_366765(67527714, -), CAediting_366766(67527728, -), CAediting_366767(67527774, -),

Top

RNA editing positional annotations for CENPC using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_366615chr4_67469348_-UTR3
CAediting_366616chr4_67469354_-UTR3
CAediting_366617chr4_67469355_-UTR3
CAediting_366618chr4_67469356_-UTR3
CAediting_366619chr4_67469358_-UTR3
CAediting_366620chr4_67469359_-UTR3
CAediting_366621chr4_67469361_-UTR3
CAediting_366622chr4_67469362_-UTR3
CAediting_366623chr4_67469363_-UTR3
CAediting_366624chr4_67469376_-UTR3
CAediting_366625chr4_67469377_-UTR3
CAediting_366626chr4_67469385_-UTR3
CAediting_366627chr4_67469399_-UTR3
CAediting_366628chr4_67469409_-UTR3
CAediting_366629chr4_67469412_-UTR3
CAediting_366630chr4_67469414_-UTR3
CAediting_366631chr4_67469415_-UTR3
CAediting_366632chr4_67469419_-UTR3
CAediting_366633chr4_67469434_-UTR3
CAediting_366634chr4_67469436_-UTR3
CAediting_366635chr4_67469443_-UTR3
CAediting_366636chr4_67469444_-UTR3
CAediting_366637chr4_67469452_-UTR3
CAediting_366638chr4_67469453_-UTR3
CAediting_366639chr4_67469455_-UTR3
CAediting_366640chr4_67469458_-UTR3
CAediting_366641chr4_67469462_-UTR3
CAediting_366642chr4_67469468_-UTR3
CAediting_366643chr4_67469470_-UTR3
CAediting_366644chr4_67469474_-UTR3
CAediting_366645chr4_67469483_-UTR3
CAediting_366646chr4_67469484_-UTR3
CAediting_366647chr4_67469494_-UTR3
CAediting_366648chr4_67469499_-UTR3
CAediting_366649chr4_67469502_-UTR3
CAediting_366650chr4_67469510_-UTR3
CAediting_366651chr4_67469514_-UTR3
CAediting_366652chr4_67469515_-UTR3
CAediting_366653chr4_67469517_-UTR3
CAediting_366654chr4_67469521_-UTR3
CAediting_366655chr4_67469522_-UTR3
CAediting_366656chr4_67469523_-UTR3
CAediting_366657chr4_67469524_-UTR3
CAediting_366658chr4_67469527_-UTR3
CAediting_366659chr4_67469539_-UTR3
CAediting_366660chr4_67469540_-UTR3
CAediting_366661chr4_67469548_-UTR3
CAediting_366662chr4_67469549_-UTR3
CAediting_366663chr4_67469558_-UTR3
CAediting_366664chr4_67469563_-UTR3
CAediting_366665chr4_67469572_-UTR3
CAediting_366666chr4_67469593_-UTR3
CAediting_366667chr4_67469607_-UTR3
CAediting_366668chr4_67469609_-UTR3
CAediting_366669chr4_67469610_-UTR3
CAediting_366670chr4_67469615_-UTR3
CAediting_366671chr4_67469616_-UTR3
CAediting_366672chr4_67469624_-UTR3
CAediting_366673chr4_67469650_-UTR3
CAediting_366674chr4_67469652_-UTR3
CAediting_366675chr4_67469653_-UTR3
CAediting_366676chr4_67469654_-UTR3
CAediting_366677chr4_67469656_-UTR3
CAediting_366678chr4_67469658_-UTR3
CAediting_366679chr4_67469666_-UTR3
CAediting_366680chr4_67470312_-UTR3
CAediting_366681chr4_67470326_-UTR3
CAediting_366682chr4_67470327_-UTR3
CAediting_366683chr4_67470328_-UTR3
CAediting_366684chr4_67470336_-UTR3
CAediting_366685chr4_67470341_-UTR3
CAediting_366686chr4_67470345_-UTR3
CAediting_366687chr4_67470349_-UTR3
CAediting_366688chr4_67470360_-UTR3
CAediting_366689chr4_67470367_-UTR3
CAediting_366690chr4_67470392_-UTR3
CAediting_366691chr4_67470398_-UTR3
CAediting_366692chr4_67470400_-UTR3
CAediting_366693chr4_67470404_-UTR3
CAediting_366694chr4_67470406_-UTR3
CAediting_366695chr4_67470409_-UTR3
CAediting_366696chr4_67470434_-UTR3
CAediting_366697chr4_67470450_-UTR3
CAediting_366698chr4_67470460_-UTR3
CAediting_366699chr4_67470463_-UTR3
CAediting_366700chr4_67470472_-UTR3
CAediting_366701chr4_67470486_-UTR3
CAediting_366702chr4_67470489_-UTR3
CAediting_366703chr4_67470509_-UTR3
CAediting_366704chr4_67470510_-UTR3
CAediting_366705chr4_67470515_-UTR3
CAediting_366706chr4_67470525_-UTR3
CAediting_366707chr4_67470559_-UTR3
CAediting_366708chr4_67470565_-UTR3
CAediting_366709chr4_67470567_-UTR3
CAediting_366710chr4_67470867_-UTR3
CAediting_366711chr4_67473582_-intronic
CAediting_366712chr4_67473613_-intronic
CAediting_366713chr4_67474098_-intronic
CAediting_366714chr4_67474122_-intronic
CAediting_366715chr4_67474125_-intronic
CAediting_366716chr4_67474132_-intronic
CAediting_366717chr4_67474161_-intronic
CAediting_366718chr4_67474162_-intronic
CAediting_366719chr4_67474170_-intronic
CAediting_366720chr4_67474176_-intronic
CAediting_366721chr4_67474193_-intronic
CAediting_366722chr4_67474270_-intronic
CAediting_366723chr4_67474315_-intronic
CAediting_366724chr4_67474329_-intronic
CAediting_366725chr4_67474337_-intronic
CAediting_366726chr4_67474447_-intronic
CAediting_366727chr4_67474491_-intronic
CAediting_366728chr4_67474496_-intronic
CAediting_366729chr4_67474532_-intronic
CAediting_366730chr4_67474535_-intronic
CAediting_366731chr4_67474541_-intronic
CAediting_366732chr4_67474586_-intronic
CAediting_366733chr4_67474598_-intronic
CAediting_366734chr4_67474616_-intronic
CAediting_366735chr4_67474690_-intronic
CAediting_366736chr4_67475621_-intronic
CAediting_366737chr4_67475695_-intronic
CAediting_366738chr4_67483275_-intronic
CAediting_366739chr4_67483296_-intronic
CAediting_366740chr4_67483306_-intronic
CAediting_366741chr4_67483346_-intronic
CAediting_366742chr4_67483348_-intronic
CAediting_366743chr4_67483350_-intronic
CAediting_366744chr4_67484598_-intronic
CAediting_366745chr4_67497611_-ncRNA_intronic
CAediting_366746chr4_67497621_-ncRNA_intronic
CAediting_366747chr4_67497715_-ncRNA_intronic
CAediting_366748chr4_67517238_-ncRNA_intronic
CAediting_366749chr4_67517300_-ncRNA_intronic
CAediting_366750chr4_67517308_-ncRNA_intronic
CAediting_366751chr4_67517365_-ncRNA_intronic
CAediting_366752chr4_67517716_-ncRNA_intronic
CAediting_366753chr4_67521752_-ncRNA_intronic
CAediting_366754chr4_67523279_-ncRNA_intronic
CAediting_366755chr4_67527591_-ncRNA_intronic
CAediting_366756chr4_67527592_-ncRNA_intronic
CAediting_366757chr4_67527603_-ncRNA_intronic
CAediting_366758chr4_67527622_-ncRNA_intronic
CAediting_366759chr4_67527629_-ncRNA_intronic
CAediting_366760chr4_67527639_-ncRNA_intronic
CAediting_366761chr4_67527668_-ncRNA_intronic
CAediting_366762chr4_67527677_-ncRNA_intronic
CAediting_366763chr4_67527696_-ncRNA_intronic
CAediting_366764chr4_67527700_-ncRNA_intronic
CAediting_366765chr4_67527714_-ncRNA_intronic
CAediting_366766chr4_67527728_-ncRNA_intronic
CAediting_366767chr4_67527774_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_366615chr4_67469348_-SINEAluAluSx1
CAediting_366616chr4_67469354_-SINEAluAluSx1
CAediting_366617chr4_67469355_-SINEAluAluSx1
CAediting_366618chr4_67469356_-SINEAluAluSx1
CAediting_366619chr4_67469358_-SINEAluAluSx1
CAediting_366620chr4_67469359_-SINEAluAluSx1
CAediting_366621chr4_67469361_-SINEAluAluSx1
CAediting_366622chr4_67469362_-SINEAluAluSx1
CAediting_366623chr4_67469363_-SINEAluAluSx1
CAediting_366624chr4_67469376_-SINEAluAluSx1
CAediting_366625chr4_67469377_-SINEAluAluSx1
CAediting_366626chr4_67469385_-SINEAluAluSx1
CAediting_366627chr4_67469399_-SINEAluAluSx1
CAediting_366628chr4_67469409_-SINEAluAluSx1
CAediting_366629chr4_67469412_-SINEAluAluSx1
CAediting_366630chr4_67469414_-SINEAluAluSx1
CAediting_366631chr4_67469415_-SINEAluAluSx1
CAediting_366632chr4_67469419_-SINEAluAluSx1
CAediting_366633chr4_67469434_-SINEAluAluSx1
CAediting_366634chr4_67469436_-SINEAluAluSx1
CAediting_366635chr4_67469443_-SINEAluAluSx1
CAediting_366636chr4_67469444_-SINEAluAluSx1
CAediting_366637chr4_67469452_-SINEAluAluSx1
CAediting_366638chr4_67469453_-SINEAluAluSx1
CAediting_366639chr4_67469455_-SINEAluAluSx1
CAediting_366640chr4_67469458_-SINEAluAluSx1
CAediting_366641chr4_67469462_-SINEAluAluSx1
CAediting_366642chr4_67469468_-SINEAluAluSx1
CAediting_366643chr4_67469470_-SINEAluAluSx1
CAediting_366644chr4_67469474_-SINEAluAluSx1
CAediting_366645chr4_67469483_-SINEAluAluSx1
CAediting_366646chr4_67469484_-SINEAluAluSx1
CAediting_366647chr4_67469494_-SINEAluAluSx1
CAediting_366648chr4_67469499_-SINEAluAluSx1
CAediting_366649chr4_67469502_-SINEAluAluSx1
CAediting_366650chr4_67469510_-SINEAluAluSx1
CAediting_366651chr4_67469514_-SINEAluAluSx1
CAediting_366652chr4_67469515_-SINEAluAluSx1
CAediting_366653chr4_67469517_-SINEAluAluSx1
CAediting_366654chr4_67469521_-SINEAluAluSx1
CAediting_366655chr4_67469522_-SINEAluAluSx1
CAediting_366656chr4_67469523_-SINEAluAluSx1
CAediting_366657chr4_67469524_-SINEAluAluSx1
CAediting_366658chr4_67469527_-SINEAluAluSx1
CAediting_366659chr4_67469539_-SINEAluAluSx1
CAediting_366660chr4_67469540_-SINEAluAluSx1
CAediting_366661chr4_67469548_-SINEAluAluSx1
CAediting_366662chr4_67469549_-SINEAluAluSx1
CAediting_366663chr4_67469558_-SINEAluAluSx1
CAediting_366664chr4_67469563_-SINEAluAluSx1
CAediting_366665chr4_67469572_-SINEAluAluSx1
CAediting_366666chr4_67469593_-SINEAluAluSx1
CAediting_366667chr4_67469607_-SINEAluAluSx1
CAediting_366668chr4_67469609_-SINEAluAluSx1
CAediting_366669chr4_67469610_-SINEAluAluSx1
CAediting_366670chr4_67469615_-SINEAluAluSx1
CAediting_366671chr4_67469616_-SINEAluAluSx1
CAediting_366672chr4_67469624_-SINEAluAluSx1
CAediting_366673chr4_67469650_-LINEL1L1PBb
CAediting_366674chr4_67469652_-LINEL1L1PBb
CAediting_366675chr4_67469653_-LINEL1L1PBb
CAediting_366676chr4_67469654_-LINEL1L1PBb
CAediting_366677chr4_67469656_-LINEL1L1PBb
CAediting_366678chr4_67469658_-LINEL1L1PBb
CAediting_366679chr4_67469666_-LINEL1L1PBb
CAediting_366680chr4_67470312_-SINEAluAluSq2
CAediting_366681chr4_67470326_-SINEAluAluSq2
CAediting_366682chr4_67470327_-SINEAluAluSq2
CAediting_366683chr4_67470328_-SINEAluAluSq2
CAediting_366684chr4_67470336_-SINEAluAluSq2
CAediting_366685chr4_67470341_-SINEAluAluSq2
CAediting_366686chr4_67470345_-SINEAluAluSq2
CAediting_366687chr4_67470349_-SINEAluAluSq2
CAediting_366688chr4_67470360_-SINEAluAluSq2
CAediting_366689chr4_67470367_-SINEAluAluSq2
CAediting_366690chr4_67470392_-SINEAluAluSq2
CAediting_366691chr4_67470398_-SINEAluAluSq2
CAediting_366692chr4_67470400_-SINEAluAluSq2
CAediting_366693chr4_67470404_-SINEAluAluSq2
CAediting_366694chr4_67470406_-SINEAluAluSq2
CAediting_366695chr4_67470409_-SINEAluAluSq2
CAediting_366696chr4_67470434_-SINEAluAluSq2
CAediting_366697chr4_67470450_-SINEAluAluSq2
CAediting_366698chr4_67470460_-SINEAluAluSq2
CAediting_366699chr4_67470463_-SINEAluAluSq2
CAediting_366700chr4_67470472_-SINEAluAluSq2
CAediting_366701chr4_67470486_-SINEAluAluSq2
CAediting_366702chr4_67470489_-SINEAluAluSq2
CAediting_366703chr4_67470509_-SINEAluAluSq2
CAediting_366704chr4_67470510_-SINEAluAluSq2
CAediting_366705chr4_67470515_-SINEAluAluSq2
CAediting_366706chr4_67470525_-SINEAluAluSq2
CAediting_366707chr4_67470559_-SINEAluAluSq2
CAediting_366708chr4_67470565_-SINEAluAluSq2
CAediting_366709chr4_67470567_-SINEAluAluSq2
CAediting_366710chr4_67470867_-LINEL1L1M4a1
CAediting_366711chr4_67473582_-SINEAluAluJr4
CAediting_366712chr4_67473613_-SINEAluAluJr4
CAediting_366713chr4_67474098_-SINEAluAluY
CAediting_366714chr4_67474122_-SINEAluAluY
CAediting_366715chr4_67474125_-SINEAluAluY
CAediting_366716chr4_67474132_-SINEAluAluY
CAediting_366717chr4_67474161_-SINEAluAluY
CAediting_366718chr4_67474162_-SINEAluAluY
CAediting_366719chr4_67474170_-SINEAluAluY
CAediting_366720chr4_67474176_-SINEAluAluY
CAediting_366721chr4_67474193_-SINEAluAluY
CAediting_366722chr4_67474270_-SINEAluAluY
CAediting_366723chr4_67474315_-SINEAluAluY
CAediting_366724chr4_67474329_-SINEAluAluY
CAediting_366725chr4_67474337_-SINEAluAluY
CAediting_366726chr4_67474447_-SINEAluAluSz6
CAediting_366727chr4_67474491_-SINEAluAluSz6
CAediting_366728chr4_67474496_-SINEAluAluSz6
CAediting_366729chr4_67474532_-SINEAluAluSz6
CAediting_366730chr4_67474535_-SINEAluAluSz6
CAediting_366731chr4_67474541_-SINEAluAluSz6
CAediting_366732chr4_67474586_-SINEAluAluSz6
CAediting_366733chr4_67474598_-SINEAluAluSz6
CAediting_366734chr4_67474616_-SINEAluAluSz6
CAediting_366735chr4_67474690_-SINEAluAluSz6
CAediting_366736chr4_67475621_-SINEAluAluYc
CAediting_366737chr4_67475695_-SINEAluAluYc
CAediting_366738chr4_67483275_-SINEAluAluSz6
CAediting_366739chr4_67483296_-SINEAluAluSz6
CAediting_366740chr4_67483306_-SINEAluAluSz6
CAediting_366741chr4_67483346_-SINEAluAluSz6
CAediting_366742chr4_67483348_-SINEAluAluSz6
CAediting_366743chr4_67483350_-SINEAluAluSz6
CAediting_366744chr4_67484598_-DNAhAT-CharlieMER1B
CAediting_366745chr4_67497611_-SINEAluAluJb
CAediting_366746chr4_67497621_-SINEAluAluJb
CAediting_366747chr4_67497715_-SINEAluAluJb
CAediting_366748chr4_67517238_-SINEAluAluSz
CAediting_366749chr4_67517300_-SINEAluAluSz
CAediting_366750chr4_67517308_-SINEAluAluSz
CAediting_366751chr4_67517365_-SINEAluAluSz
CAediting_366752chr4_67517716_-SINEAluAluSx1
CAediting_366753chr4_67521752_-LINEL1L1MB2
CAediting_366754chr4_67523279_-SINEAluAluSx1
CAediting_366755chr4_67527591_-SINEAluAluJr
CAediting_366756chr4_67527592_-SINEAluAluJr
CAediting_366757chr4_67527603_-SINEAluAluJr
CAediting_366758chr4_67527622_-SINEAluAluJr
CAediting_366759chr4_67527629_-SINEAluAluJr
CAediting_366760chr4_67527639_-SINEAluAluJr
CAediting_366761chr4_67527668_-SINEAluAluJr
CAediting_366762chr4_67527677_-SINEAluAluJr
CAediting_366763chr4_67527696_-SINEAluAluJr
CAediting_366764chr4_67527700_-SINEAluAluJr
CAediting_366765chr4_67527714_-SINEAluAluJr
CAediting_366766chr4_67527728_-SINEAluAluJr
CAediting_366767chr4_67527774_-SINEAluAluJr

Top

RNA A-to-I editing events in the alternative splicing sites for CENPC

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000145241.9.CENPC.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000145241.9.CENPC.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for CENPC

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
KIRP.CAediting_366625.ENSG00000145241.CENPC.png
Soverview
SARC.CAediting_366707.ENSG00000145241.CENPC.png
Soverview
SKCM.CAediting_366681.ENSG00000145241.CENPC.png
Soverview
SKCM.CAediting_366695.ENSG00000145241.CENPC.png
Soverview

Top

Protein coding region RNA A-to-I editings for CENPC

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for CENPC

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_228905chr2_188297554_+ENSG00000145241.9ENST00000506882hsa-miR-561-3p67510819675108257mer-m86751081867510839152-11.55

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for CENPC

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000273853.9protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_366615ENST00000273853.9chr4_67469348_--2053.00-2051.90-2072.70
CAediting_366616ENST00000273853.9chr4_67469354_--2052.00-2051.90-2072.70
CAediting_366617ENST00000273853.9chr4_67469355_--2052.00-2051.90-2072.70
CAediting_366618ENST00000273853.9chr4_67469356_--2051.50-2051.90-2072.70
CAediting_366619ENST00000273853.9chr4_67469358_--2051.50-2051.90-2072.70
CAediting_366620ENST00000273853.9chr4_67469359_--2052.00-2051.90-2072.70
CAediting_366621ENST00000273853.9chr4_67469361_--2052.00-2051.90-2072.70
CAediting_366622ENST00000273853.9chr4_67469362_--2052.00-2051.90-2072.70
CAediting_366623ENST00000273853.9chr4_67469363_--2052.00-2051.90-2072.70
CAediting_366624ENST00000273853.9chr4_67469376_--2051.30-2051.90-2072.70
CAediting_366625ENST00000273853.9chr4_67469377_--2056.10-2051.90-2072.70
CAediting_366626ENST00000273853.9chr4_67469385_--2051.10-2051.90-2072.70
CAediting_366627ENST00000273853.9chr4_67469399_--2051.50-2051.90-2072.70
CAediting_366628ENST00000273853.9chr4_67469409_--2051.50-2051.90-2072.70
CAediting_366629ENST00000273853.9chr4_67469412_--2051.30-2051.90-2072.70
CAediting_366630ENST00000273853.9chr4_67469414_--2051.80-2051.90-2072.70
CAediting_366631ENST00000273853.9chr4_67469415_--2057.90-2051.90-2072.70
CAediting_366632ENST00000273853.9chr4_67469419_--2051.00-2051.90-2072.70
CAediting_366633ENST00000273853.9chr4_67469434_--2058.60-2051.90-2072.70
CAediting_366634ENST00000273853.9chr4_67469436_--2051.00-2051.90-2072.70
CAediting_366635ENST00000273853.9chr4_67469443_--2051.90-2051.90-2072.70
CAediting_366636ENST00000273853.9chr4_67469444_--2051.40-2051.90-2072.70
CAediting_366637ENST00000273853.9chr4_67469452_--2051.90-2051.90-2072.70
CAediting_366638ENST00000273853.9chr4_67469453_--2051.40-2051.90-2072.70
CAediting_366639ENST00000273853.9chr4_67469455_--2051.00-2051.90-2072.70
CAediting_366640ENST00000273853.9chr4_67469458_--2051.20-2051.90-2072.70
CAediting_366641ENST00000273853.9chr4_67469462_--2051.00-2051.90-2072.70
CAediting_366642ENST00000273853.9chr4_67469468_--2054.00-2051.90-2072.70
CAediting_366643ENST00000273853.9chr4_67469470_--2053.40-2051.90-2072.70
CAediting_366644ENST00000273853.9chr4_67469474_--2051.90-2051.90-2072.70
CAediting_366645ENST00000273853.9chr4_67469483_--2051.90-2051.90-2072.70
CAediting_366646ENST00000273853.9chr4_67469484_--2052.00-2051.90-2072.70
CAediting_366647ENST00000273853.9chr4_67469494_--2051.10-2051.90-2072.70
CAediting_366648ENST00000273853.9chr4_67469499_--2058.60-2051.90-2072.70
CAediting_366649ENST00000273853.9chr4_67469502_--2057.70-2051.90-2072.70
CAediting_366650ENST00000273853.9chr4_67469510_--2051.60-2051.90-2072.70
CAediting_366651ENST00000273853.9chr4_67469514_--2051.50-2051.90-2072.70
CAediting_366652ENST00000273853.9chr4_67469515_--2052.00-2051.90-2072.70
CAediting_366653ENST00000273853.9chr4_67469517_--2051.60-2051.90-2072.70
CAediting_366654ENST00000273853.9chr4_67469521_--2050.00-2051.90-2072.70
CAediting_366655ENST00000273853.9chr4_67469522_--2052.00-2051.90-2072.70
CAediting_366656ENST00000273853.9chr4_67469523_--2052.00-2051.90-2072.70
CAediting_366657ENST00000273853.9chr4_67469524_--2052.00-2051.90-2072.70
CAediting_366658ENST00000273853.9chr4_67469527_--2051.90-2051.90-2072.70
CAediting_366659ENST00000273853.9chr4_67469539_--2052.00-2051.90-2072.70
CAediting_366660ENST00000273853.9chr4_67469540_--2051.40-2051.90-2072.70
CAediting_366661ENST00000273853.9chr4_67469548_--2051.90-2051.90-2072.70
CAediting_366662ENST00000273853.9chr4_67469549_--2051.00-2051.90-2072.70
CAediting_366663ENST00000273853.9chr4_67469558_--2053.70-2051.90-2072.70
CAediting_366664ENST00000273853.9chr4_67469563_--2051.00-2051.90-2072.70
CAediting_366665ENST00000273853.9chr4_67469572_--2051.20-2051.90-2072.70
CAediting_366666ENST00000273853.9chr4_67469593_--2056.60-2051.90-2072.70
CAediting_366667ENST00000273853.9chr4_67469607_--2051.50-2051.90-2072.70
CAediting_366668ENST00000273853.9chr4_67469609_--2051.90-2051.90-2072.70
CAediting_366669ENST00000273853.9chr4_67469610_--2051.60-2051.90-2072.70
CAediting_366670ENST00000273853.9chr4_67469615_--2051.90-2051.90-2072.70
CAediting_366671ENST00000273853.9chr4_67469616_--2052.00-2051.90-2072.70
CAediting_366672ENST00000273853.9chr4_67469624_--2048.50-2051.90-2072.70
CAediting_366673ENST00000273853.9chr4_67469650_--2054.10-2051.90-2072.70
CAediting_366674ENST00000273853.9chr4_67469652_--2053.40-2051.90-2072.70
CAediting_366675ENST00000273853.9chr4_67469653_--2052.00-2051.90-2072.70
CAediting_366676ENST00000273853.9chr4_67469654_--2051.40-2051.90-2072.70
CAediting_366677ENST00000273853.9chr4_67469656_--2051.60-2051.90-2072.70
CAediting_366678ENST00000273853.9chr4_67469658_--2051.50-2051.90-2072.70
CAediting_366679ENST00000273853.9chr4_67469666_--2056.10-2051.90-2072.70
CAediting_366680ENST00000273853.9chr4_67470312_--2051.20-2051.90-2072.70
CAediting_366681ENST00000273853.9chr4_67470326_--2051.60-2051.90-2072.70
CAediting_366682ENST00000273853.9chr4_67470327_--2052.00-2051.90-2072.70
CAediting_366683ENST00000273853.9chr4_67470328_--2051.60-2051.90-2072.70
CAediting_366684ENST00000273853.9chr4_67470336_--2051.90-2051.90-2072.70
CAediting_366685ENST00000273853.9chr4_67470341_--2055.30-2051.90-2072.70
CAediting_366686ENST00000273853.9chr4_67470345_--2051.50-2051.90-2072.70
CAediting_366687ENST00000273853.9chr4_67470349_--2051.30-2051.90-2072.70
CAediting_366688ENST00000273853.9chr4_67470360_--2051.30-2051.90-2072.70
CAediting_366689ENST00000273853.9chr4_67470367_--2048.90-2051.90-2072.70
CAediting_366690ENST00000273853.9chr4_67470392_--2051.50-2051.90-2072.70
CAediting_366691ENST00000273853.9chr4_67470398_--2055.60-2051.90-2072.70
CAediting_366692ENST00000273853.9chr4_67470400_--2058.10-2051.90-2072.70
CAediting_366693ENST00000273853.9chr4_67470404_--2051.00-2051.90-2072.70
CAediting_366694ENST00000273853.9chr4_67470406_--2051.60-2051.90-2072.70
CAediting_366695ENST00000273853.9chr4_67470409_--2051.60-2051.90-2072.70
CAediting_366696ENST00000273853.9chr4_67470434_--2051.90-2051.90-2072.70
CAediting_366697ENST00000273853.9chr4_67470450_--2051.90-2051.90-2072.70
CAediting_366698ENST00000273853.9chr4_67470460_--2051.60-2051.90-2072.70
CAediting_366699ENST00000273853.9chr4_67470463_--2051.00-2051.90-2072.70
CAediting_366700ENST00000273853.9chr4_67470472_--2051.20-2051.90-2072.70
CAediting_366701ENST00000273853.9chr4_67470486_--2051.60-2051.90-2072.70
CAediting_366702ENST00000273853.9chr4_67470489_--2051.60-2051.90-2072.70
CAediting_366703ENST00000273853.9chr4_67470509_--2051.90-2051.90-2072.70
CAediting_366704ENST00000273853.9chr4_67470510_--2051.60-2051.90-2072.70
CAediting_366705ENST00000273853.9chr4_67470515_--2051.50-2051.90-2072.70
CAediting_366706ENST00000273853.9chr4_67470525_--2051.30-2051.90-2072.70
CAediting_366707ENST00000273853.9chr4_67470559_--2055.50-2051.90-2072.70
CAediting_366708ENST00000273853.9chr4_67470565_--2051.00-2051.90-2072.70
CAediting_366709ENST00000273853.9chr4_67470567_--2051.20-2051.90-2072.70
CAediting_366710ENST00000273853.9chr4_67470867_--2053.80-2051.90-2072.70

Top

Relation with ADAR for CENPC

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BLCACAediting_366624chr4_67469376_-2.11409104390286e-050.461480538640282....
BRCACAediting_366624chr4_67469376_-4.33853414620785e-230.403352069977744....
CESCCAediting_366624chr4_67469376_-0.003701230817206570.242929639431185....
LUADCAediting_366624chr4_67469376_-5.67970876001855e-050.389485871809074....
LUSCCAediting_366624chr4_67469376_-2.79034174887312e-080.609154353537460.04095525900143870.2467554363325780.003942190906795040.342726603402832
PRADCAediting_366624chr4_67469376_-0.0002607796602461050.207649711362021....
THCACAediting_366624chr4_67469376_-4.08178642831202e-090.274487898837388....
KIRCCAediting_366624chr4_67469376_-2.88165726167892e-050.260725708727024....
UCECCAediting_366624chr4_67469376_-0.0225873131218090.282534474446118....
ESCACAediting_366624chr4_67469376_-0.01044807153918340.317991752035435....
OVCAediting_366624chr4_67469376_-0.0006826985720030550.223314493657669....
PAADCAediting_366624chr4_67469376_-0.0291258376258280.305733075708558....
SKCMCAediting_366624chr4_67469376_-0.001074756467376590.30908400594152....
SARCCAediting_366624chr4_67469376_-0.000103492764693980.354088725750001....
TGCTCAediting_366624chr4_67469376_-0.008013407526001260.319008379642502....
THYMCAediting_366624chr4_67469376_-3.6491696112106e-050.414317766651885..0.00350794669528220.299779018946183
BLCACAediting_366625chr4_67469377_-0.0005761398883572290.369982742091236....
BRCACAediting_366625chr4_67469377_-5.33628155798154e-100.256706309166008....
CESCCAediting_366625chr4_67469377_-0.001703420465552650.261935314658477....
LUSCCAediting_366625chr4_67469377_-6.83224007827843e-050.448765285669932....
STADCAediting_366625chr4_67469377_-0.03451569893694980.184877188462865....
THCACAediting_366625chr4_67469377_-1.1552922409939e-060.22863397251418....
KIRCCAediting_366625chr4_67469377_-0.002509272738239890.187036395092621....
UCECCAediting_366625chr4_67469377_-0.03108679477325080.25795293310043....
KIRPCAediting_366625chr4_67469377_-0.004158280523852090.285634856515878....
OVCAediting_366625chr4_67469377_-0.0001850550019020230.245152750374923....
SKCMCAediting_366625chr4_67469377_-0.02413576345599920.208414080083006....
SARCCAediting_366625chr4_67469377_-0.02115816104711120.208545180747439....
TGCTCAediting_366625chr4_67469377_-0.02229475915801190.274818953002659....
THYMCAediting_366625chr4_67469377_-0.0005078226138111580.351758182312396....
BRCACAediting_366631chr4_67469415_-2.49054848828976e-100.335396965551671....
LUADCAediting_366631chr4_67469415_-0.0001280445888639990.515397769199265....
STADCAediting_366631chr4_67469415_-0.03147230598386420.280397769440003....
THCACAediting_366631chr4_67469415_-0.00060098511843420.20344843505909....
KIRCCAediting_366631chr4_67469415_-0.01232316836119810.205269872216598....
OVCAediting_366631chr4_67469415_-0.03077779458146180.186695166135514....
BRCACAediting_366635chr4_67469443_-0.01082744100649590.236819402671294....
BRCACAediting_366670chr4_67469615_-1.99689591604299e-090.50268522866822....
BRCACAediting_366671chr4_67469616_-1.62268352255789e-050.296145643398802....
OVCAediting_366671chr4_67469616_-0.02157187568190270.225140154210483....
BRCACAediting_366681chr4_67470326_-1.01583161563103e-050.271974268303754....
THCACAediting_366681chr4_67470326_-0.0002581583320809880.266312174778573....
BRCACAediting_366682chr4_67470327_-0.01569199241045270.1956805984055....
BRCACAediting_366684chr4_67470336_-1.29740536534202e-070.354514729018743....
THCACAediting_366684chr4_67470336_-0.02565397991529170.17585716610759....
KIRCCAediting_366684chr4_67470336_-0.005618597951179930.265996621367175....
OVCAediting_366684chr4_67470336_-0.04399517957245520.254656533219441....
BRCACAediting_366692chr4_67470400_-0.006582262914903350.17317218179775....
BRCACAediting_366694chr4_67470406_-7.59219806460206e-070.321958115331836....
BRCACAediting_366695chr4_67470409_-7.86332084526807e-070.2978768751424....
BRCACAediting_366697chr4_67470450_-9.88257813743305e-060.267302573102923....
THCACAediting_366697chr4_67470450_-0.02128851429150720.145596365204905....
KIRCCAediting_366697chr4_67470450_-0.001160994757479580.30849649410246....
THCACAediting_366698chr4_67470460_-0.02779567375004490.17028690077136....
BRCACAediting_366707chr4_67470559_-6.79188103911696e-130.417442147665908....
THCACAediting_366707chr4_67470559_-9.31659243753972e-060.261893808165627....

Top

Relation with cancer stages for CENPC

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
KIRCpathologic_stageCAediting_366625chr4_67469377_-0.04251725482116370.126390860254218
KIRPclinical_stageCAediting_366624chr4_67469376_-0.004079582172106230.336796681045877
KIRPclinical_stageCAediting_366625chr4_67469377_-0.003880539361568620.336236430436152
KIRPpathologic_stageCAediting_366624chr4_67469376_-0.03386506796528980.227762855733084
KIRPpathologic_stageCAediting_366625chr4_67469377_-0.03331917414366550.224598636851229
THCApathologic_stageCAediting_366631chr4_67469415_-0.02705691168592740.133079804620827
THCApathologic_stageCAediting_366657chr4_67469524_-0.0475850720126471-0.256847878813825
THCApathologic_stageCAediting_366707chr4_67470559_-0.01045860069847470.154169182810209

Top

Relation with survival for CENPC

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
CESCCAediting_366625chr4_67469377_-0.04618254493869870.007561130.0265021
SKCMCAediting_366625chr4_67469377_-0.001045832091804310.0005687270.0445302

Top

RelatedDrugs for CENPC

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for CENPC

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource