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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: RPP30 (CAeditome ID:10556) |
Gene summary for RPP30 |
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Gene information | Gene symbol | RPP30 | Gene ID | 10556 |
Gene name | ribonuclease P/MRP subunit p30 | |
Synonyms | TSG15 | |
Cytomap | 10q23.31 | |
Type of gene | protein-coding | |
Description | ribonuclease P protein subunit p30RNase P subunit 2RNaseP protein p30ribonuclease P/MRP 30kDa subunit | |
Modification date | 20210518 | |
UniProtAcc | P78346 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
RPP30 | GO:0004526 | Ribonuclease P protein subunit p30 | 30454648 |
RPP30 | GO:0033204 | Ribonuclease P protein subunit p30 | 16723659 |
RPP30 | GO:0033204 | Ribonuclease P protein subunit p30 | 30454648 |
RPP30 | GO:0001682 | Ribonuclease P protein subunit p30 | 16723659 |
RPP30 | GO:0001682 | Ribonuclease P protein subunit p30 | 30454648 |
RPP30 | GO:0000172 | Ribonuclease P protein subunit p30 | 16723659 |
RPP30 | GO:0030681 | Ribonuclease P protein subunit p30 | 16723659 |
RPP30 | GO:0030681 | Ribonuclease P protein subunit p30 | 30454648 |
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RNA A-to-I events for RPP30 |
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CAediting_770467(90878594, +), CAediting_770468(90901075, +), CAediting_770469(90901100, +), CAediting_770470(90901104, +), CAediting_770471(90901247, +), CAediting_770472(90901899, +), CAediting_770473(90901979, +), CAediting_770474(90901982, +), CAediting_770475(90901984, +), CAediting_770476(90901996, +), CAediting_770477(90902004, +), CAediting_770478(90902008, +), CAediting_770479(90902019, +), CAediting_770480(90902257, +), CAediting_770481(90902261, +), CAediting_770482(90902279, +), CAediting_770483(90902282, +), CAediting_770484(90902292, +), CAediting_770485(90902297, +), CAediting_770486(90902317, +), CAediting_770487(90902318, +), CAediting_770488(90902335, +), CAediting_770489(90902367, +), CAediting_770490(90902380, +), CAediting_770491(90902384, +), CAediting_770492(90902385, +), CAediting_770493(90902393, +), CAediting_770494(90902403, +), CAediting_770495(90902431, +), CAediting_770496(90902437, +), CAediting_770497(90902454, +), CAediting_770498(90902480, +), CAediting_770499(90902513, +), CAediting_770500(90904551, +), CAediting_770501(90904557, +), CAediting_770502(90904558, +), CAediting_770503(90904571, +), CAediting_770504(90904574, +), CAediting_770505(90904579, +), CAediting_770506(90904580, +), CAediting_770507(90904611, +), CAediting_770508(90904612, +), CAediting_770509(90904627, +), CAediting_770510(90904657, +), CAediting_770511(90904661, +), CAediting_770512(90904662, +), CAediting_770513(90904665, +), CAediting_770514(90904686, +), CAediting_770515(90904691, +), CAediting_770516(90904692, +), CAediting_770517(90904701, +), CAediting_770518(90904718, +), CAediting_770519(90904722, +), CAediting_770520(90904723, +), CAediting_770521(90904733, +), CAediting_770522(90904744, +), CAediting_770523(90904769, +), CAediting_770524(90904797, +), |
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RNA editing positional annotations for RPP30 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
CAediting_770482 | chr10_90902279_+ | nonsynonymous SNV | ENST00000413330.4 | c.A833G | p.H278R | D | . | N |
CAediting_770483 | chr10_90902282_+ | nonsynonymous SNV | ENST00000413330.4 | c.A836G | p.N279S | D | . | N |
CAediting_770485 | chr10_90902297_+ | nonsynonymous SNV | ENST00000413330.4 | c.A851G | p.Q284R | D | . | N |
CAediting_770486 | chr10_90902317_+ | nonsynonymous SNV | ENST00000413330.4 | c.A871G | p.K291E | D | . | N |
CAediting_770487 | chr10_90902318_+ | nonsynonymous SNV | ENST00000413330.4 | c.A872G | p.K291R | D | . | N |
CAediting_770488 | chr10_90902335_+ | nonsynonymous SNV | ENST00000413330.4 | c.A889G | p.S297G | D | . | N |
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CAeditome ID | Position | Variant type |
CAediting_770467 | chr10_90878594_+ | ncRNA_intronic |
CAediting_770468 | chr10_90901075_+ | ncRNA_intronic |
CAediting_770469 | chr10_90901100_+ | ncRNA_intronic |
CAediting_770470 | chr10_90901104_+ | ncRNA_intronic |
CAediting_770471 | chr10_90901247_+ | ncRNA_intronic |
CAediting_770472 | chr10_90901899_+ | ncRNA_intronic |
CAediting_770473 | chr10_90901979_+ | ncRNA_intronic |
CAediting_770474 | chr10_90901982_+ | ncRNA_intronic |
CAediting_770475 | chr10_90901984_+ | ncRNA_intronic |
CAediting_770476 | chr10_90901996_+ | ncRNA_intronic |
CAediting_770477 | chr10_90902004_+ | ncRNA_intronic |
CAediting_770478 | chr10_90902008_+ | ncRNA_intronic |
CAediting_770479 | chr10_90902019_+ | ncRNA_intronic |
CAediting_770480 | chr10_90902257_+ | exonic |
CAediting_770481 | chr10_90902261_+ | exonic |
CAediting_770482 | chr10_90902279_+ | exonic |
CAediting_770483 | chr10_90902282_+ | exonic |
CAediting_770484 | chr10_90902292_+ | exonic |
CAediting_770485 | chr10_90902297_+ | exonic |
CAediting_770486 | chr10_90902317_+ | exonic |
CAediting_770487 | chr10_90902318_+ | exonic |
CAediting_770488 | chr10_90902335_+ | exonic |
CAediting_770489 | chr10_90902367_+ | ncRNA_intronic |
CAediting_770490 | chr10_90902380_+ | ncRNA_intronic |
CAediting_770491 | chr10_90902384_+ | ncRNA_intronic |
CAediting_770492 | chr10_90902385_+ | ncRNA_intronic |
CAediting_770493 | chr10_90902393_+ | ncRNA_intronic |
CAediting_770494 | chr10_90902403_+ | ncRNA_intronic |
CAediting_770495 | chr10_90902431_+ | ncRNA_intronic |
CAediting_770496 | chr10_90902437_+ | ncRNA_intronic |
CAediting_770497 | chr10_90902454_+ | ncRNA_intronic |
CAediting_770498 | chr10_90902480_+ | ncRNA_intronic |
CAediting_770499 | chr10_90902513_+ | ncRNA_intronic |
CAediting_770500 | chr10_90904551_+ | ncRNA_intronic |
CAediting_770501 | chr10_90904557_+ | ncRNA_intronic |
CAediting_770502 | chr10_90904558_+ | ncRNA_intronic |
CAediting_770503 | chr10_90904571_+ | ncRNA_intronic |
CAediting_770504 | chr10_90904574_+ | ncRNA_intronic |
CAediting_770505 | chr10_90904579_+ | ncRNA_intronic |
CAediting_770506 | chr10_90904580_+ | ncRNA_intronic |
CAediting_770507 | chr10_90904611_+ | ncRNA_intronic |
CAediting_770508 | chr10_90904612_+ | ncRNA_intronic |
CAediting_770509 | chr10_90904627_+ | ncRNA_intronic |
CAediting_770510 | chr10_90904657_+ | ncRNA_intronic |
CAediting_770511 | chr10_90904661_+ | ncRNA_intronic |
CAediting_770512 | chr10_90904662_+ | ncRNA_intronic |
CAediting_770513 | chr10_90904665_+ | ncRNA_intronic |
CAediting_770514 | chr10_90904686_+ | ncRNA_intronic |
CAediting_770515 | chr10_90904691_+ | ncRNA_intronic |
CAediting_770516 | chr10_90904692_+ | ncRNA_intronic |
CAediting_770517 | chr10_90904701_+ | ncRNA_intronic |
CAediting_770518 | chr10_90904718_+ | ncRNA_intronic |
CAediting_770519 | chr10_90904722_+ | ncRNA_intronic |
CAediting_770520 | chr10_90904723_+ | ncRNA_intronic |
CAediting_770521 | chr10_90904733_+ | ncRNA_intronic |
CAediting_770522 | chr10_90904744_+ | ncRNA_intronic |
CAediting_770523 | chr10_90904769_+ | ncRNA_intronic |
CAediting_770524 | chr10_90904797_+ | ncRNA_intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_770467 | chr10_90878594_+ | SINE | Alu | AluJb |
CAediting_770468 | chr10_90901075_+ | SINE | Alu | AluJo |
CAediting_770469 | chr10_90901100_+ | SINE | Alu | AluJo |
CAediting_770470 | chr10_90901104_+ | SINE | Alu | AluJo |
CAediting_770471 | chr10_90901247_+ | SINE | Alu | AluJo |
CAediting_770472 | chr10_90901899_+ | SINE | Alu | AluY |
CAediting_770473 | chr10_90901979_+ | SINE | Alu | AluY |
CAediting_770474 | chr10_90901982_+ | SINE | Alu | AluY |
CAediting_770475 | chr10_90901984_+ | SINE | Alu | AluY |
CAediting_770476 | chr10_90901996_+ | SINE | Alu | AluY |
CAediting_770477 | chr10_90902004_+ | SINE | Alu | AluY |
CAediting_770478 | chr10_90902008_+ | SINE | Alu | AluY |
CAediting_770479 | chr10_90902019_+ | SINE | Alu | AluY |
CAediting_770480 | chr10_90902257_+ | SINE | Alu | AluSz6 |
CAediting_770481 | chr10_90902261_+ | SINE | Alu | AluSz6 |
CAediting_770482 | chr10_90902279_+ | SINE | Alu | AluSz6 |
CAediting_770483 | chr10_90902282_+ | SINE | Alu | AluSz6 |
CAediting_770484 | chr10_90902292_+ | SINE | Alu | AluSz6 |
CAediting_770485 | chr10_90902297_+ | SINE | Alu | AluSz6 |
CAediting_770486 | chr10_90902317_+ | SINE | Alu | AluSz6 |
CAediting_770487 | chr10_90902318_+ | SINE | Alu | AluSz6 |
CAediting_770488 | chr10_90902335_+ | SINE | Alu | AluSz6 |
CAediting_770489 | chr10_90902367_+ | SINE | Alu | AluSz6 |
CAediting_770490 | chr10_90902380_+ | SINE | Alu | AluSz6 |
CAediting_770491 | chr10_90902384_+ | SINE | Alu | AluSz6 |
CAediting_770492 | chr10_90902385_+ | SINE | Alu | AluSz6 |
CAediting_770493 | chr10_90902393_+ | SINE | Alu | AluSz6 |
CAediting_770494 | chr10_90902403_+ | SINE | Alu | AluSz6 |
CAediting_770495 | chr10_90902431_+ | SINE | Alu | AluSz6 |
CAediting_770496 | chr10_90902437_+ | SINE | Alu | AluSz6 |
CAediting_770497 | chr10_90902454_+ | SINE | Alu | AluSz6 |
CAediting_770498 | chr10_90902480_+ | SINE | Alu | AluSz6 |
CAediting_770499 | chr10_90902513_+ | SINE | Alu | AluSz6 |
CAediting_770500 | chr10_90904551_+ | SINE | Alu | AluSz6 |
CAediting_770501 | chr10_90904557_+ | SINE | Alu | AluSz6 |
CAediting_770502 | chr10_90904558_+ | SINE | Alu | AluSz6 |
CAediting_770503 | chr10_90904571_+ | SINE | Alu | AluSz6 |
CAediting_770504 | chr10_90904574_+ | SINE | Alu | AluSz6 |
CAediting_770505 | chr10_90904579_+ | SINE | Alu | AluSz6 |
CAediting_770506 | chr10_90904580_+ | SINE | Alu | AluSz6 |
CAediting_770507 | chr10_90904611_+ | SINE | Alu | AluSz6 |
CAediting_770508 | chr10_90904612_+ | SINE | Alu | AluSz6 |
CAediting_770509 | chr10_90904627_+ | SINE | Alu | AluSz6 |
CAediting_770510 | chr10_90904657_+ | SINE | Alu | AluSz6 |
CAediting_770511 | chr10_90904661_+ | SINE | Alu | AluSz6 |
CAediting_770512 | chr10_90904662_+ | SINE | Alu | AluSz6 |
CAediting_770513 | chr10_90904665_+ | SINE | Alu | AluSz6 |
CAediting_770514 | chr10_90904686_+ | SINE | Alu | AluSz6 |
CAediting_770515 | chr10_90904691_+ | SINE | Alu | AluSz6 |
CAediting_770516 | chr10_90904692_+ | SINE | Alu | AluSz6 |
CAediting_770517 | chr10_90904701_+ | SINE | Alu | AluSz6 |
CAediting_770518 | chr10_90904718_+ | SINE | Alu | AluSz6 |
CAediting_770519 | chr10_90904722_+ | SINE | Alu | AluSz6 |
CAediting_770520 | chr10_90904723_+ | SINE | Alu | AluSz6 |
CAediting_770521 | chr10_90904733_+ | SINE | Alu | AluSz6 |
CAediting_770522 | chr10_90904744_+ | SINE | Alu | AluSz6 |
CAediting_770523 | chr10_90904769_+ | SINE | Alu | AluSz6 |
CAediting_770524 | chr10_90904797_+ | SINE | Alu | AluSz6 |
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RNA A-to-I editing events in the alternative splicing sites for RPP30 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RPP30 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for RPP30 |
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The effects of the RNA editing to the miRNA binding sites for RPP30 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for RPP30 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for RPP30 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for RPP30 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for RPP30 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for RPP30 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for RPP30 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |