|
Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples | |
The effects of the RNA editing to the stability of the RNA structures | |
Editing gene: DEAF1 (CAeditome ID:10522) |
Gene summary for DEAF1 |
Gene summary |
Gene information | Gene symbol | DEAF1 | Gene ID | 10522 |
Gene name | DEAF1 transcription factor | |
Synonyms | MRD24|NEDHELS|NUDR|SPN|VSVS|ZMYND5 | |
Cytomap | 11p15.5 | |
Type of gene | protein-coding | |
Description | deformed epidermal autoregulatory factor 1 homolognuclear DEAF-1-related transcriptional regulatorsuppressinzinc finger MYND domain-containing protein 5 | |
Modification date | 20210518 | |
UniProtAcc | O75398 | |
Context |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Gene | GO ID | GO term | PubMed ID |
DEAF1 | GO:0000977 | Deformed epidermal autoregulatory factor 1 homolog | 24726472 |
DEAF1 | GO:0001227 | Deformed epidermal autoregulatory factor 1 homolog | 24726472 |
DEAF1 | GO:0000122 | Deformed epidermal autoregulatory factor 1 homolog | 24726472 |
DEAF1 | GO:0033599 | Deformed epidermal autoregulatory factor 1 homolog | 18826651 |
DEAF1 | GO:0045892 | Deformed epidermal autoregulatory factor 1 homolog | 24726472 |
DEAF1 | GO:0045893 | Deformed epidermal autoregulatory factor 1 homolog | 24726472 |
DEAF1 | GO:0001650 | Deformed epidermal autoregulatory factor 1 homolog | 0000052 |
DEAF1 | GO:0005654 | Deformed epidermal autoregulatory factor 1 homolog | 0000052 |
Top |
RNA A-to-I events for DEAF1 |
RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure. |
RNA editing frequencies across 33 cancers of gene: ENSG00000177030.15 |
RNA A-to-I editing events in Cancer. |
CAediting_791066(644918, -), CAediting_791067(644937, -), CAediting_791068(645000, -), CAediting_791069(645015, -), CAediting_791070(645041, -), CAediting_791071(645054, -), CAediting_791072(645087, -), CAediting_791073(645119, -), CAediting_791074(645345, -), CAediting_791075(645365, -), CAediting_791076(645372, -), CAediting_791077(645384, -), CAediting_791078(645389, -), CAediting_791079(645402, -), CAediting_791080(645409, -), CAediting_791081(645413, -), CAediting_791082(645428, -), CAediting_791083(645442, -), CAediting_791084(645449, -), CAediting_791085(645454, -), CAediting_791086(645455, -), CAediting_791087(645461, -), CAediting_791088(645477, -), CAediting_791089(645481, -), CAediting_791090(645488, -), CAediting_791091(645500, -), CAediting_791092(645568, -), CAediting_791093(645590, -), CAediting_791094(645994, -), CAediting_791095(645996, -), CAediting_791096(646023, -), CAediting_791097(646061, -), CAediting_791098(646087, -), CAediting_791099(646090, -), CAediting_791100(646105, -), CAediting_791101(646136, -), CAediting_791102(646141, -), CAediting_791103(646145, -), CAediting_791104(646153, -), CAediting_791105(646170, -), CAediting_791106(646171, -), CAediting_791107(646177, -), CAediting_791108(646190, -), CAediting_791109(646206, -), CAediting_791110(646207, -), CAediting_791111(646249, -), CAediting_791112(646913, -), CAediting_791113(646978, -), CAediting_791114(647035, -), CAediting_791115(647037, -), CAediting_791116(647047, -), CAediting_791117(647051, -), CAediting_791118(647076, -), CAediting_791119(647077, -), CAediting_791120(647098, -), CAediting_791121(647152, -), CAediting_791122(647156, -), CAediting_791123(647193, -), CAediting_791124(647199, -), CAediting_791125(647204, -), CAediting_791126(647211, -), CAediting_791127(647271, -), CAediting_791128(647306, -), CAediting_791129(647332, -), CAediting_791130(647343, -), CAediting_791131(647372, -), CAediting_791132(647373, -), CAediting_791133(647379, -), CAediting_791134(647451, -), CAediting_791135(647453, -), CAediting_791136(648252, -), CAediting_791137(648333, -), CAediting_791138(648364, -), CAediting_791139(649006, -), CAediting_791140(649021, -), CAediting_791141(649309, -), CAediting_791142(649310, -), CAediting_791143(649313, -), CAediting_791144(649314, -), CAediting_791145(649335, -), CAediting_791146(649339, -), CAediting_791147(649370, -), CAediting_791148(649376, -), CAediting_791149(649674, -), CAediting_791150(649769, -), CAediting_791151(649774, -), CAediting_791152(649781, -), CAediting_791153(649791, -), CAediting_791154(649814, -), CAediting_791155(649863, -), CAediting_791156(649878, -), CAediting_791157(649881, -), CAediting_791158(649882, -), CAediting_791159(649904, -), CAediting_791160(649914, -), CAediting_791161(649926, -), CAediting_791162(649943, -), CAediting_791163(649957, -), CAediting_791164(649963, -), CAediting_791165(649969, -), CAediting_791166(649974, -), CAediting_791167(649987, -), CAediting_791168(649993, -), CAediting_791169(650011, -), CAediting_791170(650118, -), CAediting_791171(650130, -), CAediting_791172(650140, -), CAediting_791173(650230, -), CAediting_791174(650252, -), CAediting_791175(650266, -), CAediting_791176(650291, -), CAediting_791177(650340, -), CAediting_791178(650348, -), CAediting_791179(650360, -), CAediting_791180(650548, -), CAediting_791181(650552, -), CAediting_791182(650553, -), CAediting_791183(650556, -), CAediting_791184(650557, -), CAediting_791185(650577, -), CAediting_791186(650588, -), CAediting_791187(650593, -), CAediting_791188(650595, -), CAediting_791189(650596, -), CAediting_791190(650601, -), CAediting_791191(650611, -), CAediting_791192(650612, -), CAediting_791193(650617, -), CAediting_791194(650621, -), CAediting_791195(650626, -), CAediting_791196(650687, -), CAediting_791197(650690, -), CAediting_791198(650694, -), CAediting_791199(650696, -), CAediting_791200(650699, -), CAediting_791201(650708, -), CAediting_791202(650709, -), CAediting_791203(650710, -), CAediting_791204(650728, -), CAediting_791205(650736, -), CAediting_791206(650737, -), CAediting_791207(650762, -), CAediting_791208(650771, -), CAediting_791209(650784, -), CAediting_791210(650786, -), CAediting_791211(650791, -), CAediting_791212(650797, -), CAediting_791213(650806, -), CAediting_791214(650807, -), CAediting_791215(650811, -), CAediting_791216(650824, -), CAediting_791217(650826, -), CAediting_791218(650832, -), CAediting_791219(650839, -), CAediting_791220(650844, -), CAediting_791221(650848, -), CAediting_791222(650854, -), CAediting_791223(650857, -), CAediting_791224(650863, -), CAediting_791225(650868, -), CAediting_791226(650873, -), CAediting_791227(650875, -), CAediting_791228(650879, -), CAediting_791229(650887, -), CAediting_791230(650893, -), CAediting_791231(650895, -), CAediting_791232(650899, -), CAediting_791233(650906, -), CAediting_791234(650978, -), CAediting_791235(650985, -), CAediting_791236(650996, -), CAediting_791237(650998, -), CAediting_791238(651000, -), CAediting_791239(651015, -), CAediting_791240(651025, -), CAediting_791241(651030, -), CAediting_791242(651035, -), CAediting_791243(651039, -), CAediting_791244(651052, -), CAediting_791245(651059, -), CAediting_791246(651060, -), CAediting_791247(651068, -), CAediting_791248(651071, -), CAediting_791249(651074, -), CAediting_791250(651078, -), CAediting_791251(651088, -), CAediting_791252(651091, -), CAediting_791253(651095, -), CAediting_791254(651100, -), CAediting_791255(651101, -), CAediting_791256(651123, -), CAediting_791257(651127, -), CAediting_791258(651130, -), CAediting_791259(651131, -), CAediting_791260(651132, -), CAediting_791261(651133, -), CAediting_791262(651134, -), CAediting_791263(651136, -), CAediting_791264(651138, -), CAediting_791265(651140, -), CAediting_791266(651141, -), CAediting_791267(651145, -), CAediting_791268(651151, -), CAediting_791269(651158, -), CAediting_791270(651159, -), CAediting_791271(651166, -), CAediting_791272(651167, -), CAediting_791273(651176, -), CAediting_791274(651181, -), CAediting_791275(651187, -), CAediting_791276(651197, -), CAediting_791277(651200, -), CAediting_791278(651206, -), CAediting_791279(651232, -), CAediting_791280(651241, -), CAediting_791281(651249, -), CAediting_791282(651251, -), CAediting_791283(651259, -), CAediting_791284(651293, -), CAediting_791285(651302, -), CAediting_791286(651309, -), CAediting_791287(651312, -), CAediting_791288(651324, -), CAediting_791289(651330, -), CAediting_791290(651331, -), CAediting_791291(651332, -), CAediting_791292(651340, -), CAediting_791293(651345, -), CAediting_791294(651353, -), CAediting_791295(651383, -), CAediting_791296(651386, -), CAediting_791297(651395, -), CAediting_791298(651605, -), CAediting_791299(651625, -), CAediting_791300(651627, -), CAediting_791301(651630, -), CAediting_791302(651639, -), CAediting_791303(651652, -), CAediting_791304(651693, -), CAediting_791305(651697, -), CAediting_791306(651713, -), CAediting_791307(651719, -), CAediting_791308(651722, -), CAediting_791309(651728, -), CAediting_791310(651751, -), CAediting_791311(651762, -), CAediting_791312(651764, -), CAediting_791313(651767, -), CAediting_791314(651774, -), CAediting_791315(651786, -), CAediting_791316(651804, -), CAediting_791317(651823, -), CAediting_791318(651824, -), CAediting_791319(651839, -), CAediting_791320(651848, -), CAediting_791321(651884, -), CAediting_791322(652378, -), CAediting_791323(652394, -), CAediting_791324(652420, -), CAediting_791325(652421, -), CAediting_791326(652435, -), CAediting_791327(652458, -), CAediting_791328(652472, -), CAediting_791329(652475, -), CAediting_791330(652483, -), CAediting_791331(652489, -), CAediting_791332(652490, -), CAediting_791333(652506, -), CAediting_791334(652514, -), CAediting_791335(652516, -), CAediting_791336(652526, -), CAediting_791337(652529, -), CAediting_791338(652538, -), CAediting_791339(652555, -), CAediting_791340(652556, -), CAediting_791341(652617, -), CAediting_791342(652632, -), CAediting_791343(652634, -), CAediting_791344(652891, -), CAediting_791345(652944, -), CAediting_791346(653001, -), CAediting_791347(654206, -), CAediting_791348(654261, -), CAediting_791349(654265, -), CAediting_791350(654266, -), CAediting_791351(654274, -), CAediting_791352(654280, -), CAediting_791353(654299, -), CAediting_791354(654307, -), CAediting_791355(654331, -), CAediting_791356(654340, -), CAediting_791357(654349, -), CAediting_791358(654411, -), CAediting_791359(654630, -), CAediting_791360(654649, -), CAediting_791361(654706, -), CAediting_791362(654729, -), CAediting_791363(654787, -), CAediting_791364(654868, -), CAediting_791365(654912, -), CAediting_791366(654914, -), CAediting_791367(654926, -), CAediting_791368(654936, -), CAediting_791369(654941, -), CAediting_791370(654981, -), CAediting_791371(655194, -), CAediting_791372(655880, -), CAediting_791373(655887, -), CAediting_791374(656349, -), CAediting_791375(656395, -), CAediting_791376(656404, -), CAediting_791377(656430, -), CAediting_791378(658329, -), CAediting_791379(659135, -), CAediting_791380(659174, -), CAediting_791381(659175, -), CAediting_791382(659274, -), CAediting_791383(659277, -), CAediting_791384(659293, -), CAediting_791385(659307, -), CAediting_791386(659310, -), CAediting_791387(659311, -), CAediting_791388(659317, -), CAediting_791389(659324, -), CAediting_791390(659331, -), CAediting_791391(659336, -), CAediting_791392(659341, -), CAediting_791393(659371, -), CAediting_791394(659391, -), CAediting_791395(663259, -), CAediting_791396(663548, -), CAediting_791397(681273, -), CAediting_791398(681302, -), CAediting_791399(681303, -), CAediting_791400(681307, -), CAediting_791401(681308, -), CAediting_791402(681369, -), CAediting_791403(681370, -), CAediting_791404(681539, -), CAediting_791405(681549, -), CAediting_791406(681571, -), CAediting_791407(681575, -), CAediting_791408(681582, -), CAediting_791409(681588, -), CAediting_791410(681594, -), CAediting_791411(681605, -), CAediting_791412(681677, -), CAediting_791413(684173, -), CAediting_791414(684183, -), CAediting_791415(684335, -), CAediting_791416(685149, -), CAediting_791417(685170, -), CAediting_791418(685200, -), CAediting_791419(685222, -), CAediting_791420(685225, -), CAediting_791421(689241, -), CAediting_791422(689282, -), CAediting_791423(689303, -), CAediting_791424(689309, -), CAediting_791425(689330, -), CAediting_791426(689344, -), CAediting_791427(689373, -), CAediting_791428(689377, -), CAediting_791429(689392, -), CAediting_791430(689401, -), CAediting_791431(689408, -), CAediting_791432(689414, -), CAediting_791433(689437, -), CAediting_791434(689438, -), CAediting_791435(689440, -), CAediting_791436(689475, -), CAediting_791437(689478, -), CAediting_791438(689483, -), CAediting_791439(689484, -), CAediting_791440(690566, -), CAediting_791441(690580, -), CAediting_791442(690622, -), CAediting_791443(690624, -), CAediting_791444(690646, -), CAediting_791445(690659, -), CAediting_791446(690664, -), CAediting_791447(690689, -), CAediting_791448(690700, -), |
Top |
RNA editing positional annotations for DEAF1 using Annovar |
Protein coding RNA editing(s). |
CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
Gene structure information of RNA editing(s). |
CAeditome ID | Position | Variant type |
CAediting_791066 | chr11_644918_- | ncRNA_intronic |
CAediting_791067 | chr11_644937_- | ncRNA_intronic |
CAediting_791068 | chr11_645000_- | ncRNA_intronic |
CAediting_791069 | chr11_645015_- | ncRNA_intronic |
CAediting_791070 | chr11_645041_- | ncRNA_intronic |
CAediting_791071 | chr11_645054_- | ncRNA_intronic |
CAediting_791072 | chr11_645087_- | ncRNA_intronic |
CAediting_791073 | chr11_645119_- | ncRNA_intronic |
CAediting_791074 | chr11_645345_- | ncRNA_intronic |
CAediting_791075 | chr11_645365_- | ncRNA_intronic |
CAediting_791076 | chr11_645372_- | ncRNA_intronic |
CAediting_791077 | chr11_645384_- | ncRNA_intronic |
CAediting_791078 | chr11_645389_- | ncRNA_intronic |
CAediting_791079 | chr11_645402_- | ncRNA_intronic |
CAediting_791080 | chr11_645409_- | ncRNA_intronic |
CAediting_791081 | chr11_645413_- | ncRNA_intronic |
CAediting_791082 | chr11_645428_- | ncRNA_intronic |
CAediting_791083 | chr11_645442_- | ncRNA_intronic |
CAediting_791084 | chr11_645449_- | ncRNA_intronic |
CAediting_791085 | chr11_645454_- | ncRNA_intronic |
CAediting_791086 | chr11_645455_- | ncRNA_intronic |
CAediting_791087 | chr11_645461_- | ncRNA_intronic |
CAediting_791088 | chr11_645477_- | ncRNA_intronic |
CAediting_791089 | chr11_645481_- | ncRNA_intronic |
CAediting_791090 | chr11_645488_- | ncRNA_intronic |
CAediting_791091 | chr11_645500_- | ncRNA_intronic |
CAediting_791092 | chr11_645568_- | ncRNA_intronic |
CAediting_791093 | chr11_645590_- | ncRNA_intronic |
CAediting_791094 | chr11_645994_- | ncRNA_intronic |
CAediting_791095 | chr11_645996_- | ncRNA_intronic |
CAediting_791096 | chr11_646023_- | ncRNA_intronic |
CAediting_791097 | chr11_646061_- | ncRNA_intronic |
CAediting_791098 | chr11_646087_- | ncRNA_intronic |
CAediting_791099 | chr11_646090_- | ncRNA_intronic |
CAediting_791100 | chr11_646105_- | ncRNA_intronic |
CAediting_791101 | chr11_646136_- | ncRNA_intronic |
CAediting_791102 | chr11_646141_- | ncRNA_intronic |
CAediting_791103 | chr11_646145_- | ncRNA_intronic |
CAediting_791104 | chr11_646153_- | ncRNA_intronic |
CAediting_791105 | chr11_646170_- | ncRNA_intronic |
CAediting_791106 | chr11_646171_- | ncRNA_intronic |
CAediting_791107 | chr11_646177_- | ncRNA_intronic |
CAediting_791108 | chr11_646190_- | ncRNA_intronic |
CAediting_791109 | chr11_646206_- | ncRNA_intronic |
CAediting_791110 | chr11_646207_- | ncRNA_intronic |
CAediting_791111 | chr11_646249_- | ncRNA_intronic |
CAediting_791112 | chr11_646913_- | intronic |
CAediting_791113 | chr11_646978_- | intronic |
CAediting_791114 | chr11_647035_- | intronic |
CAediting_791115 | chr11_647037_- | intronic |
CAediting_791116 | chr11_647047_- | intronic |
CAediting_791117 | chr11_647051_- | intronic |
CAediting_791118 | chr11_647076_- | intronic |
CAediting_791119 | chr11_647077_- | intronic |
CAediting_791120 | chr11_647098_- | intronic |
CAediting_791121 | chr11_647152_- | intronic |
CAediting_791122 | chr11_647156_- | intronic |
CAediting_791123 | chr11_647193_- | intronic |
CAediting_791124 | chr11_647199_- | intronic |
CAediting_791125 | chr11_647204_- | intronic |
CAediting_791126 | chr11_647211_- | intronic |
CAediting_791127 | chr11_647271_- | intronic |
CAediting_791128 | chr11_647306_- | intronic |
CAediting_791129 | chr11_647332_- | intronic |
CAediting_791130 | chr11_647343_- | intronic |
CAediting_791131 | chr11_647372_- | intronic |
CAediting_791132 | chr11_647373_- | intronic |
CAediting_791133 | chr11_647379_- | intronic |
CAediting_791134 | chr11_647451_- | intronic |
CAediting_791135 | chr11_647453_- | intronic |
CAediting_791136 | chr11_648252_- | intronic |
CAediting_791137 | chr11_648333_- | intronic |
CAediting_791138 | chr11_648364_- | intronic |
CAediting_791139 | chr11_649006_- | intronic |
CAediting_791140 | chr11_649021_- | intronic |
CAediting_791141 | chr11_649309_- | intronic |
CAediting_791142 | chr11_649310_- | intronic |
CAediting_791143 | chr11_649313_- | intronic |
CAediting_791144 | chr11_649314_- | intronic |
CAediting_791145 | chr11_649335_- | intronic |
CAediting_791146 | chr11_649339_- | intronic |
CAediting_791147 | chr11_649370_- | intronic |
CAediting_791148 | chr11_649376_- | intronic |
CAediting_791149 | chr11_649674_- | intronic |
CAediting_791150 | chr11_649769_- | intronic |
CAediting_791151 | chr11_649774_- | intronic |
CAediting_791152 | chr11_649781_- | intronic |
CAediting_791153 | chr11_649791_- | intronic |
CAediting_791154 | chr11_649814_- | intronic |
CAediting_791155 | chr11_649863_- | intronic |
CAediting_791156 | chr11_649878_- | intronic |
CAediting_791157 | chr11_649881_- | intronic |
CAediting_791158 | chr11_649882_- | intronic |
CAediting_791159 | chr11_649904_- | intronic |
CAediting_791160 | chr11_649914_- | intronic |
CAediting_791161 | chr11_649926_- | intronic |
CAediting_791162 | chr11_649943_- | intronic |
CAediting_791163 | chr11_649957_- | intronic |
CAediting_791164 | chr11_649963_- | intronic |
CAediting_791165 | chr11_649969_- | intronic |
CAediting_791166 | chr11_649974_- | intronic |
CAediting_791167 | chr11_649987_- | intronic |
CAediting_791168 | chr11_649993_- | intronic |
CAediting_791169 | chr11_650011_- | intronic |
CAediting_791170 | chr11_650118_- | intronic |
CAediting_791171 | chr11_650130_- | intronic |
CAediting_791172 | chr11_650140_- | intronic |
CAediting_791173 | chr11_650230_- | intronic |
CAediting_791174 | chr11_650252_- | intronic |
CAediting_791175 | chr11_650266_- | intronic |
CAediting_791176 | chr11_650291_- | intronic |
CAediting_791177 | chr11_650340_- | intronic |
CAediting_791178 | chr11_650348_- | intronic |
CAediting_791179 | chr11_650360_- | intronic |
CAediting_791180 | chr11_650548_- | intronic |
CAediting_791181 | chr11_650552_- | intronic |
CAediting_791182 | chr11_650553_- | intronic |
CAediting_791183 | chr11_650556_- | intronic |
CAediting_791184 | chr11_650557_- | intronic |
CAediting_791185 | chr11_650577_- | intronic |
CAediting_791186 | chr11_650588_- | intronic |
CAediting_791187 | chr11_650593_- | intronic |
CAediting_791188 | chr11_650595_- | intronic |
CAediting_791189 | chr11_650596_- | intronic |
CAediting_791190 | chr11_650601_- | intronic |
CAediting_791191 | chr11_650611_- | intronic |
CAediting_791192 | chr11_650612_- | intronic |
CAediting_791193 | chr11_650617_- | intronic |
CAediting_791194 | chr11_650621_- | intronic |
CAediting_791195 | chr11_650626_- | intronic |
CAediting_791196 | chr11_650687_- | intronic |
CAediting_791197 | chr11_650690_- | intronic |
CAediting_791198 | chr11_650694_- | intronic |
CAediting_791199 | chr11_650696_- | intronic |
CAediting_791200 | chr11_650699_- | intronic |
CAediting_791201 | chr11_650708_- | intronic |
CAediting_791202 | chr11_650709_- | intronic |
CAediting_791203 | chr11_650710_- | intronic |
CAediting_791204 | chr11_650728_- | intronic |
CAediting_791205 | chr11_650736_- | intronic |
CAediting_791206 | chr11_650737_- | intronic |
CAediting_791207 | chr11_650762_- | intronic |
CAediting_791208 | chr11_650771_- | intronic |
CAediting_791209 | chr11_650784_- | intronic |
CAediting_791210 | chr11_650786_- | intronic |
CAediting_791211 | chr11_650791_- | intronic |
CAediting_791212 | chr11_650797_- | intronic |
CAediting_791213 | chr11_650806_- | intronic |
CAediting_791214 | chr11_650807_- | intronic |
CAediting_791215 | chr11_650811_- | intronic |
CAediting_791216 | chr11_650824_- | intronic |
CAediting_791217 | chr11_650826_- | intronic |
CAediting_791218 | chr11_650832_- | intronic |
CAediting_791219 | chr11_650839_- | intronic |
CAediting_791220 | chr11_650844_- | intronic |
CAediting_791221 | chr11_650848_- | intronic |
CAediting_791222 | chr11_650854_- | intronic |
CAediting_791223 | chr11_650857_- | intronic |
CAediting_791224 | chr11_650863_- | intronic |
CAediting_791225 | chr11_650868_- | intronic |
CAediting_791226 | chr11_650873_- | intronic |
CAediting_791227 | chr11_650875_- | intronic |
CAediting_791228 | chr11_650879_- | intronic |
CAediting_791229 | chr11_650887_- | intronic |
CAediting_791230 | chr11_650893_- | intronic |
CAediting_791231 | chr11_650895_- | intronic |
CAediting_791232 | chr11_650899_- | intronic |
CAediting_791233 | chr11_650906_- | intronic |
CAediting_791234 | chr11_650978_- | intronic |
CAediting_791235 | chr11_650985_- | intronic |
CAediting_791236 | chr11_650996_- | intronic |
CAediting_791237 | chr11_650998_- | intronic |
CAediting_791238 | chr11_651000_- | intronic |
CAediting_791239 | chr11_651015_- | intronic |
CAediting_791240 | chr11_651025_- | intronic |
CAediting_791241 | chr11_651030_- | intronic |
CAediting_791242 | chr11_651035_- | intronic |
CAediting_791243 | chr11_651039_- | intronic |
CAediting_791244 | chr11_651052_- | intronic |
CAediting_791245 | chr11_651059_- | intronic |
CAediting_791246 | chr11_651060_- | intronic |
CAediting_791247 | chr11_651068_- | intronic |
CAediting_791248 | chr11_651071_- | intronic |
CAediting_791249 | chr11_651074_- | intronic |
CAediting_791250 | chr11_651078_- | intronic |
CAediting_791251 | chr11_651088_- | intronic |
CAediting_791252 | chr11_651091_- | intronic |
CAediting_791253 | chr11_651095_- | intronic |
CAediting_791254 | chr11_651100_- | intronic |
CAediting_791255 | chr11_651101_- | intronic |
CAediting_791256 | chr11_651123_- | intronic |
CAediting_791257 | chr11_651127_- | intronic |
CAediting_791258 | chr11_651130_- | intronic |
CAediting_791259 | chr11_651131_- | intronic |
CAediting_791260 | chr11_651132_- | intronic |
CAediting_791261 | chr11_651133_- | intronic |
CAediting_791262 | chr11_651134_- | intronic |
CAediting_791263 | chr11_651136_- | intronic |
CAediting_791264 | chr11_651138_- | intronic |
CAediting_791265 | chr11_651140_- | intronic |
CAediting_791266 | chr11_651141_- | intronic |
CAediting_791267 | chr11_651145_- | intronic |
CAediting_791268 | chr11_651151_- | intronic |
CAediting_791269 | chr11_651158_- | intronic |
CAediting_791270 | chr11_651159_- | intronic |
CAediting_791271 | chr11_651166_- | UTR3 |
CAediting_791272 | chr11_651167_- | UTR3 |
CAediting_791273 | chr11_651176_- | UTR3 |
CAediting_791274 | chr11_651181_- | UTR3 |
CAediting_791275 | chr11_651187_- | UTR3 |
CAediting_791276 | chr11_651197_- | UTR3 |
CAediting_791277 | chr11_651200_- | UTR3 |
CAediting_791278 | chr11_651206_- | UTR3 |
CAediting_791279 | chr11_651232_- | UTR3 |
CAediting_791280 | chr11_651241_- | UTR3 |
CAediting_791281 | chr11_651249_- | UTR3 |
CAediting_791282 | chr11_651251_- | UTR3 |
CAediting_791283 | chr11_651259_- | UTR3 |
CAediting_791284 | chr11_651293_- | UTR3 |
CAediting_791285 | chr11_651302_- | UTR3 |
CAediting_791286 | chr11_651309_- | UTR3 |
CAediting_791287 | chr11_651312_- | UTR3 |
CAediting_791288 | chr11_651324_- | exonic |
CAediting_791289 | chr11_651330_- | exonic |
CAediting_791290 | chr11_651331_- | exonic |
CAediting_791291 | chr11_651332_- | exonic |
CAediting_791292 | chr11_651340_- | exonic |
CAediting_791293 | chr11_651345_- | exonic |
CAediting_791294 | chr11_651353_- | exonic |
CAediting_791295 | chr11_651383_- | exonic |
CAediting_791296 | chr11_651386_- | exonic |
CAediting_791297 | chr11_651395_- | exonic |
CAediting_791298 | chr11_651605_- | intronic |
CAediting_791299 | chr11_651625_- | intronic |
CAediting_791300 | chr11_651627_- | intronic |
CAediting_791301 | chr11_651630_- | intronic |
CAediting_791302 | chr11_651639_- | intronic |
CAediting_791303 | chr11_651652_- | intronic |
CAediting_791304 | chr11_651693_- | intronic |
CAediting_791305 | chr11_651697_- | intronic |
CAediting_791306 | chr11_651713_- | intronic |
CAediting_791307 | chr11_651719_- | intronic |
CAediting_791308 | chr11_651722_- | intronic |
CAediting_791309 | chr11_651728_- | intronic |
CAediting_791310 | chr11_651751_- | intronic |
CAediting_791311 | chr11_651762_- | intronic |
CAediting_791312 | chr11_651764_- | intronic |
CAediting_791313 | chr11_651767_- | intronic |
CAediting_791314 | chr11_651774_- | intronic |
CAediting_791315 | chr11_651786_- | intronic |
CAediting_791316 | chr11_651804_- | intronic |
CAediting_791317 | chr11_651823_- | intronic |
CAediting_791318 | chr11_651824_- | intronic |
CAediting_791319 | chr11_651839_- | intronic |
CAediting_791320 | chr11_651848_- | intronic |
CAediting_791321 | chr11_651884_- | intronic |
CAediting_791322 | chr11_652378_- | intronic |
CAediting_791323 | chr11_652394_- | intronic |
CAediting_791324 | chr11_652420_- | intronic |
CAediting_791325 | chr11_652421_- | intronic |
CAediting_791326 | chr11_652435_- | intronic |
CAediting_791327 | chr11_652458_- | intronic |
CAediting_791328 | chr11_652472_- | intronic |
CAediting_791329 | chr11_652475_- | intronic |
CAediting_791330 | chr11_652483_- | intronic |
CAediting_791331 | chr11_652489_- | intronic |
CAediting_791332 | chr11_652490_- | intronic |
CAediting_791333 | chr11_652506_- | intronic |
CAediting_791334 | chr11_652514_- | intronic |
CAediting_791335 | chr11_652516_- | intronic |
CAediting_791336 | chr11_652526_- | intronic |
CAediting_791337 | chr11_652529_- | intronic |
CAediting_791338 | chr11_652538_- | intronic |
CAediting_791339 | chr11_652555_- | intronic |
CAediting_791340 | chr11_652556_- | intronic |
CAediting_791341 | chr11_652617_- | intronic |
CAediting_791342 | chr11_652632_- | intronic |
CAediting_791343 | chr11_652634_- | intronic |
CAediting_791344 | chr11_652891_- | intronic |
CAediting_791345 | chr11_652944_- | intronic |
CAediting_791346 | chr11_653001_- | intronic |
CAediting_791347 | chr11_654206_- | ncRNA_intronic |
CAediting_791348 | chr11_654261_- | ncRNA_intronic |
CAediting_791349 | chr11_654265_- | ncRNA_intronic |
CAediting_791350 | chr11_654266_- | ncRNA_intronic |
CAediting_791351 | chr11_654274_- | ncRNA_intronic |
CAediting_791352 | chr11_654280_- | ncRNA_intronic |
CAediting_791353 | chr11_654299_- | ncRNA_intronic |
CAediting_791354 | chr11_654307_- | ncRNA_intronic |
CAediting_791355 | chr11_654331_- | ncRNA_intronic |
CAediting_791356 | chr11_654340_- | ncRNA_intronic |
CAediting_791357 | chr11_654349_- | ncRNA_intronic |
CAediting_791358 | chr11_654411_- | ncRNA_intronic |
CAediting_791359 | chr11_654630_- | ncRNA_intronic |
CAediting_791360 | chr11_654649_- | ncRNA_intronic |
CAediting_791361 | chr11_654706_- | ncRNA_intronic |
CAediting_791362 | chr11_654729_- | ncRNA_intronic |
CAediting_791363 | chr11_654787_- | ncRNA_intronic |
CAediting_791364 | chr11_654868_- | ncRNA_intronic |
CAediting_791365 | chr11_654912_- | ncRNA_intronic |
CAediting_791366 | chr11_654914_- | ncRNA_intronic |
CAediting_791367 | chr11_654926_- | ncRNA_intronic |
CAediting_791368 | chr11_654936_- | ncRNA_intronic |
CAediting_791369 | chr11_654941_- | ncRNA_intronic |
CAediting_791370 | chr11_654981_- | ncRNA_intronic |
CAediting_791371 | chr11_655194_- | ncRNA_intronic |
CAediting_791372 | chr11_655880_- | ncRNA_intronic |
CAediting_791373 | chr11_655887_- | ncRNA_intronic |
CAediting_791374 | chr11_656349_- | ncRNA_intronic |
CAediting_791375 | chr11_656395_- | ncRNA_intronic |
CAediting_791376 | chr11_656404_- | ncRNA_intronic |
CAediting_791377 | chr11_656430_- | ncRNA_intronic |
CAediting_791378 | chr11_658329_- | ncRNA_intronic |
CAediting_791379 | chr11_659135_- | ncRNA_intronic |
CAediting_791380 | chr11_659174_- | ncRNA_intronic |
CAediting_791381 | chr11_659175_- | ncRNA_intronic |
CAediting_791382 | chr11_659274_- | ncRNA_intronic |
CAediting_791383 | chr11_659277_- | ncRNA_intronic |
CAediting_791384 | chr11_659293_- | ncRNA_intronic |
CAediting_791385 | chr11_659307_- | ncRNA_intronic |
CAediting_791386 | chr11_659310_- | ncRNA_intronic |
CAediting_791387 | chr11_659311_- | ncRNA_intronic |
CAediting_791388 | chr11_659317_- | ncRNA_intronic |
CAediting_791389 | chr11_659324_- | ncRNA_intronic |
CAediting_791390 | chr11_659331_- | ncRNA_intronic |
CAediting_791391 | chr11_659336_- | ncRNA_intronic |
CAediting_791392 | chr11_659341_- | ncRNA_intronic |
CAediting_791393 | chr11_659371_- | ncRNA_intronic |
CAediting_791394 | chr11_659391_- | ncRNA_intronic |
CAediting_791395 | chr11_663259_- | ncRNA_intronic |
CAediting_791396 | chr11_663548_- | ncRNA_intronic |
CAediting_791397 | chr11_681273_- | ncRNA_intronic |
CAediting_791398 | chr11_681302_- | ncRNA_intronic |
CAediting_791399 | chr11_681303_- | ncRNA_intronic |
CAediting_791400 | chr11_681307_- | ncRNA_intronic |
CAediting_791401 | chr11_681308_- | ncRNA_intronic |
CAediting_791402 | chr11_681369_- | ncRNA_intronic |
CAediting_791403 | chr11_681370_- | ncRNA_intronic |
CAediting_791404 | chr11_681539_- | ncRNA_intronic |
CAediting_791405 | chr11_681549_- | ncRNA_intronic |
CAediting_791406 | chr11_681571_- | ncRNA_intronic |
CAediting_791407 | chr11_681575_- | ncRNA_intronic |
CAediting_791408 | chr11_681582_- | ncRNA_intronic |
CAediting_791409 | chr11_681588_- | ncRNA_intronic |
CAediting_791410 | chr11_681594_- | ncRNA_intronic |
CAediting_791411 | chr11_681605_- | ncRNA_intronic |
CAediting_791412 | chr11_681677_- | ncRNA_intronic |
CAediting_791413 | chr11_684173_- | ncRNA_intronic |
CAediting_791414 | chr11_684183_- | ncRNA_intronic |
CAediting_791415 | chr11_684335_- | ncRNA_intronic |
CAediting_791416 | chr11_685149_- | intronic |
CAediting_791417 | chr11_685170_- | intronic |
CAediting_791418 | chr11_685200_- | intronic |
CAediting_791419 | chr11_685222_- | intronic |
CAediting_791420 | chr11_685225_- | intronic |
CAediting_791421 | chr11_689241_- | ncRNA_intronic |
CAediting_791422 | chr11_689282_- | ncRNA_intronic |
CAediting_791423 | chr11_689303_- | ncRNA_intronic |
CAediting_791424 | chr11_689309_- | ncRNA_intronic |
CAediting_791425 | chr11_689330_- | ncRNA_intronic |
CAediting_791426 | chr11_689344_- | ncRNA_intronic |
CAediting_791427 | chr11_689373_- | ncRNA_intronic |
CAediting_791428 | chr11_689377_- | ncRNA_intronic |
CAediting_791429 | chr11_689392_- | ncRNA_intronic |
CAediting_791430 | chr11_689401_- | ncRNA_intronic |
CAediting_791431 | chr11_689408_- | ncRNA_intronic |
CAediting_791432 | chr11_689414_- | ncRNA_intronic |
CAediting_791433 | chr11_689437_- | ncRNA_intronic |
CAediting_791434 | chr11_689438_- | ncRNA_intronic |
CAediting_791435 | chr11_689440_- | ncRNA_intronic |
CAediting_791436 | chr11_689475_- | ncRNA_intronic |
CAediting_791437 | chr11_689478_- | ncRNA_intronic |
CAediting_791438 | chr11_689483_- | ncRNA_intronic |
CAediting_791439 | chr11_689484_- | ncRNA_intronic |
CAediting_791440 | chr11_690566_- | ncRNA_intronic |
CAediting_791441 | chr11_690580_- | ncRNA_intronic |
CAediting_791442 | chr11_690622_- | ncRNA_intronic |
CAediting_791443 | chr11_690624_- | ncRNA_intronic |
CAediting_791444 | chr11_690646_- | ncRNA_intronic |
CAediting_791445 | chr11_690659_- | ncRNA_intronic |
CAediting_791446 | chr11_690664_- | ncRNA_intronic |
CAediting_791447 | chr11_690689_- | ncRNA_intronic |
CAediting_791448 | chr11_690700_- | ncRNA_intronic |
Repat-regional RNA editing(s). |
CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_791066 | chr11_644918_- | SINE | Alu | AluSx1 |
CAediting_791067 | chr11_644937_- | SINE | Alu | AluSx1 |
CAediting_791068 | chr11_645000_- | SINE | Alu | AluSx1 |
CAediting_791069 | chr11_645015_- | SINE | Alu | AluSx1 |
CAediting_791070 | chr11_645041_- | SINE | Alu | AluSx1 |
CAediting_791071 | chr11_645054_- | SINE | Alu | AluSx1 |
CAediting_791072 | chr11_645087_- | SINE | Alu | AluSx1 |
CAediting_791073 | chr11_645119_- | SINE | Alu | AluSx1 |
CAediting_791074 | chr11_645345_- | SINE | Alu | AluSp |
CAediting_791075 | chr11_645365_- | SINE | Alu | AluSp |
CAediting_791076 | chr11_645372_- | SINE | Alu | AluSp |
CAediting_791077 | chr11_645384_- | SINE | Alu | AluSp |
CAediting_791078 | chr11_645389_- | SINE | Alu | AluSp |
CAediting_791079 | chr11_645402_- | SINE | Alu | AluSp |
CAediting_791080 | chr11_645409_- | SINE | Alu | AluSp |
CAediting_791081 | chr11_645413_- | SINE | Alu | AluSp |
CAediting_791082 | chr11_645428_- | SINE | Alu | AluSp |
CAediting_791083 | chr11_645442_- | SINE | Alu | AluSp |
CAediting_791084 | chr11_645449_- | SINE | Alu | AluSp |
CAediting_791085 | chr11_645454_- | SINE | Alu | AluSp |
CAediting_791086 | chr11_645455_- | SINE | Alu | AluSp |
CAediting_791087 | chr11_645461_- | SINE | Alu | AluSp |
CAediting_791088 | chr11_645477_- | SINE | Alu | AluSp |
CAediting_791089 | chr11_645481_- | SINE | Alu | AluSp |
CAediting_791090 | chr11_645488_- | SINE | Alu | AluSp |
CAediting_791091 | chr11_645500_- | SINE | Alu | AluSp |
CAediting_791092 | chr11_645568_- | SINE | Alu | AluSp |
CAediting_791093 | chr11_645590_- | SINE | Alu | AluSp |
CAediting_791094 | chr11_645994_- | SINE | Alu | AluSz6 |
CAediting_791095 | chr11_645996_- | SINE | Alu | AluSz6 |
CAediting_791096 | chr11_646023_- | SINE | Alu | AluSz6 |
CAediting_791097 | chr11_646061_- | SINE | Alu | AluSz6 |
CAediting_791098 | chr11_646087_- | SINE | Alu | AluSz6 |
CAediting_791099 | chr11_646090_- | SINE | Alu | AluSz6 |
CAediting_791100 | chr11_646105_- | SINE | Alu | AluSz6 |
CAediting_791101 | chr11_646136_- | SINE | Alu | AluSz6 |
CAediting_791102 | chr11_646141_- | SINE | Alu | AluSz6 |
CAediting_791103 | chr11_646145_- | SINE | Alu | AluSz6 |
CAediting_791104 | chr11_646153_- | SINE | Alu | AluSz6 |
CAediting_791105 | chr11_646170_- | SINE | Alu | AluSz6 |
CAediting_791106 | chr11_646171_- | SINE | Alu | AluSz6 |
CAediting_791107 | chr11_646177_- | SINE | Alu | AluSz6 |
CAediting_791108 | chr11_646190_- | SINE | Alu | AluSz6 |
CAediting_791109 | chr11_646206_- | SINE | Alu | AluSz6 |
CAediting_791110 | chr11_646207_- | SINE | Alu | AluSz6 |
CAediting_791111 | chr11_646249_- | SINE | Alu | AluSz6 |
CAediting_791112 | chr11_646913_- | SINE | Alu | AluJb |
CAediting_791113 | chr11_646978_- | SINE | Alu | AluJb |
CAediting_791114 | chr11_647035_- | SINE | Alu | AluJb |
CAediting_791115 | chr11_647037_- | SINE | Alu | AluJb |
CAediting_791116 | chr11_647047_- | SINE | Alu | AluJb |
CAediting_791117 | chr11_647051_- | SINE | Alu | AluJb |
CAediting_791118 | chr11_647076_- | SINE | Alu | AluJb |
CAediting_791119 | chr11_647077_- | SINE | Alu | AluJb |
CAediting_791120 | chr11_647098_- | SINE | Alu | AluJb |
CAediting_791121 | chr11_647152_- | SINE | Alu | AluJb |
CAediting_791122 | chr11_647156_- | SINE | Alu | AluJb |
CAediting_791123 | chr11_647193_- | SINE | Alu | AluSx1 |
CAediting_791124 | chr11_647199_- | SINE | Alu | AluSx1 |
CAediting_791125 | chr11_647204_- | SINE | Alu | AluSx1 |
CAediting_791126 | chr11_647211_- | SINE | Alu | AluSx1 |
CAediting_791127 | chr11_647271_- | SINE | Alu | AluSx1 |
CAediting_791128 | chr11_647306_- | SINE | Alu | AluSx1 |
CAediting_791129 | chr11_647332_- | SINE | Alu | AluSx1 |
CAediting_791130 | chr11_647343_- | SINE | Alu | AluSx1 |
CAediting_791131 | chr11_647372_- | SINE | Alu | AluSx1 |
CAediting_791132 | chr11_647373_- | SINE | Alu | AluSx1 |
CAediting_791133 | chr11_647379_- | SINE | Alu | AluSx1 |
CAediting_791134 | chr11_647451_- | SINE | Alu | AluSx1 |
CAediting_791135 | chr11_647453_- | SINE | Alu | AluSx1 |
CAediting_791136 | chr11_648252_- | SINE | Alu | AluY |
CAediting_791137 | chr11_648333_- | SINE | Alu | AluY |
CAediting_791138 | chr11_648364_- | SINE | Alu | AluY |
CAediting_791139 | chr11_649006_- | SINE | Alu | AluSz6 |
CAediting_791140 | chr11_649021_- | SINE | Alu | AluSz6 |
CAediting_791141 | chr11_649309_- | SINE | Alu | AluSx1 |
CAediting_791142 | chr11_649310_- | SINE | Alu | AluSx1 |
CAediting_791143 | chr11_649313_- | SINE | Alu | AluSx1 |
CAediting_791144 | chr11_649314_- | SINE | Alu | AluSx1 |
CAediting_791145 | chr11_649335_- | SINE | Alu | AluSx1 |
CAediting_791146 | chr11_649339_- | SINE | Alu | AluSx1 |
CAediting_791147 | chr11_649370_- | SINE | Alu | AluSx1 |
CAediting_791148 | chr11_649376_- | SINE | Alu | AluSx1 |
CAediting_791149 | chr11_649674_- | SINE | Alu | AluSz |
CAediting_791150 | chr11_649769_- | SINE | Alu | AluSx |
CAediting_791151 | chr11_649774_- | SINE | Alu | AluSx |
CAediting_791152 | chr11_649781_- | SINE | Alu | AluSx |
CAediting_791153 | chr11_649791_- | SINE | Alu | AluSx |
CAediting_791154 | chr11_649814_- | SINE | Alu | AluSx |
CAediting_791155 | chr11_649863_- | SINE | Alu | AluSx |
CAediting_791156 | chr11_649878_- | SINE | Alu | AluSx |
CAediting_791157 | chr11_649881_- | SINE | Alu | AluSx |
CAediting_791158 | chr11_649882_- | SINE | Alu | AluSx |
CAediting_791159 | chr11_649904_- | SINE | Alu | AluSx |
CAediting_791160 | chr11_649914_- | SINE | Alu | AluSx |
CAediting_791161 | chr11_649926_- | SINE | Alu | AluSx |
CAediting_791162 | chr11_649943_- | SINE | Alu | AluSx |
CAediting_791163 | chr11_649957_- | SINE | Alu | AluSx |
CAediting_791164 | chr11_649963_- | SINE | Alu | AluSx |
CAediting_791165 | chr11_649969_- | SINE | Alu | AluSx |
CAediting_791166 | chr11_649974_- | SINE | Alu | AluSx |
CAediting_791167 | chr11_649987_- | SINE | Alu | AluSx |
CAediting_791168 | chr11_649993_- | SINE | Alu | AluSx |
CAediting_791169 | chr11_650011_- | SINE | Alu | AluSx |
CAediting_791170 | chr11_650118_- | SINE | Alu | AluSx1 |
CAediting_791171 | chr11_650130_- | SINE | Alu | AluSx1 |
CAediting_791172 | chr11_650140_- | SINE | Alu | AluSx1 |
CAediting_791173 | chr11_650230_- | SINE | Alu | AluSx1 |
CAediting_791174 | chr11_650252_- | SINE | Alu | AluSx1 |
CAediting_791175 | chr11_650266_- | SINE | Alu | AluSx1 |
CAediting_791176 | chr11_650291_- | SINE | Alu | AluSx1 |
CAediting_791177 | chr11_650340_- | SINE | Alu | AluSx1 |
CAediting_791178 | chr11_650348_- | SINE | Alu | AluSx1 |
CAediting_791179 | chr11_650360_- | SINE | Alu | AluSx1 |
CAediting_791180 | chr11_650548_- | SINE | Alu | AluJo |
CAediting_791181 | chr11_650552_- | SINE | Alu | AluJo |
CAediting_791182 | chr11_650553_- | SINE | Alu | AluJo |
CAediting_791183 | chr11_650556_- | SINE | Alu | AluJo |
CAediting_791184 | chr11_650557_- | SINE | Alu | AluJo |
CAediting_791185 | chr11_650577_- | SINE | Alu | AluJo |
CAediting_791186 | chr11_650588_- | SINE | Alu | AluJo |
CAediting_791187 | chr11_650593_- | SINE | Alu | AluJo |
CAediting_791188 | chr11_650595_- | SINE | Alu | AluJo |
CAediting_791189 | chr11_650596_- | SINE | Alu | AluJo |
CAediting_791190 | chr11_650601_- | SINE | Alu | AluJo |
CAediting_791191 | chr11_650611_- | SINE | Alu | AluJo |
CAediting_791192 | chr11_650612_- | SINE | Alu | AluJo |
CAediting_791193 | chr11_650617_- | SINE | Alu | AluJo |
CAediting_791194 | chr11_650621_- | SINE | Alu | AluJo |
CAediting_791195 | chr11_650626_- | SINE | Alu | AluJo |
CAediting_791196 | chr11_650687_- | SINE | Alu | AluSz6 |
CAediting_791197 | chr11_650690_- | SINE | Alu | AluSz6 |
CAediting_791198 | chr11_650694_- | SINE | Alu | AluSz6 |
CAediting_791199 | chr11_650696_- | SINE | Alu | AluSz6 |
CAediting_791200 | chr11_650699_- | SINE | Alu | AluSz6 |
CAediting_791201 | chr11_650708_- | SINE | Alu | AluSz6 |
CAediting_791202 | chr11_650709_- | SINE | Alu | AluSz6 |
CAediting_791203 | chr11_650710_- | SINE | Alu | AluSz6 |
CAediting_791204 | chr11_650728_- | SINE | Alu | AluSz6 |
CAediting_791205 | chr11_650736_- | SINE | Alu | AluSz6 |
CAediting_791206 | chr11_650737_- | SINE | Alu | AluSz6 |
CAediting_791207 | chr11_650762_- | SINE | Alu | AluSz6 |
CAediting_791208 | chr11_650771_- | SINE | Alu | AluSz6 |
CAediting_791209 | chr11_650784_- | SINE | Alu | AluSz6 |
CAediting_791210 | chr11_650786_- | SINE | Alu | AluSz6 |
CAediting_791211 | chr11_650791_- | SINE | Alu | AluSz6 |
CAediting_791212 | chr11_650797_- | SINE | Alu | AluSz6 |
CAediting_791213 | chr11_650806_- | SINE | Alu | AluSz6 |
CAediting_791214 | chr11_650807_- | SINE | Alu | AluSz6 |
CAediting_791215 | chr11_650811_- | SINE | Alu | AluSz6 |
CAediting_791216 | chr11_650824_- | SINE | Alu | AluSz6 |
CAediting_791217 | chr11_650826_- | SINE | Alu | AluSz6 |
CAediting_791218 | chr11_650832_- | SINE | Alu | AluSz6 |
CAediting_791219 | chr11_650839_- | SINE | Alu | AluSz6 |
CAediting_791220 | chr11_650844_- | SINE | Alu | AluSz6 |
CAediting_791221 | chr11_650848_- | SINE | Alu | AluSz6 |
CAediting_791222 | chr11_650854_- | SINE | Alu | AluSz6 |
CAediting_791223 | chr11_650857_- | SINE | Alu | AluSz6 |
CAediting_791224 | chr11_650863_- | SINE | Alu | AluSz6 |
CAediting_791225 | chr11_650868_- | SINE | Alu | AluSz6 |
CAediting_791226 | chr11_650873_- | SINE | Alu | AluSz6 |
CAediting_791227 | chr11_650875_- | SINE | Alu | AluSz6 |
CAediting_791228 | chr11_650879_- | SINE | Alu | AluSz6 |
CAediting_791229 | chr11_650887_- | SINE | Alu | AluSz6 |
CAediting_791230 | chr11_650893_- | SINE | Alu | AluSz6 |
CAediting_791231 | chr11_650895_- | SINE | Alu | AluSz6 |
CAediting_791232 | chr11_650899_- | SINE | Alu | AluSz6 |
CAediting_791233 | chr11_650906_- | SINE | Alu | AluSz6 |
CAediting_791234 | chr11_650978_- | SINE | Alu | AluSx |
CAediting_791235 | chr11_650985_- | SINE | Alu | AluSx |
CAediting_791236 | chr11_650996_- | SINE | Alu | AluSx |
CAediting_791237 | chr11_650998_- | SINE | Alu | AluSx |
CAediting_791238 | chr11_651000_- | SINE | Alu | AluSx |
CAediting_791239 | chr11_651015_- | SINE | Alu | AluSx |
CAediting_791240 | chr11_651025_- | SINE | Alu | AluSx |
CAediting_791241 | chr11_651030_- | SINE | Alu | AluSx |
CAediting_791242 | chr11_651035_- | SINE | Alu | AluSx |
CAediting_791243 | chr11_651039_- | SINE | Alu | AluSx |
CAediting_791244 | chr11_651052_- | SINE | Alu | AluSx |
CAediting_791245 | chr11_651059_- | SINE | Alu | AluSx |
CAediting_791246 | chr11_651060_- | SINE | Alu | AluSx |
CAediting_791247 | chr11_651068_- | SINE | Alu | AluSx |
CAediting_791248 | chr11_651071_- | SINE | Alu | AluSx |
CAediting_791249 | chr11_651074_- | SINE | Alu | AluSx |
CAediting_791250 | chr11_651078_- | SINE | Alu | AluSx |
CAediting_791251 | chr11_651088_- | SINE | Alu | AluSx |
CAediting_791252 | chr11_651091_- | SINE | Alu | AluSx |
CAediting_791253 | chr11_651095_- | SINE | Alu | AluSx |
CAediting_791254 | chr11_651100_- | SINE | Alu | AluSx |
CAediting_791255 | chr11_651101_- | SINE | Alu | AluSx |
CAediting_791256 | chr11_651123_- | SINE | Alu | AluSx |
CAediting_791257 | chr11_651127_- | SINE | Alu | AluSx |
CAediting_791258 | chr11_651130_- | SINE | Alu | AluSx |
CAediting_791259 | chr11_651131_- | SINE | Alu | AluSx |
CAediting_791260 | chr11_651132_- | SINE | Alu | AluSx |
CAediting_791261 | chr11_651133_- | SINE | Alu | AluSx |
CAediting_791262 | chr11_651134_- | SINE | Alu | AluSx |
CAediting_791263 | chr11_651136_- | SINE | Alu | AluSx |
CAediting_791264 | chr11_651138_- | SINE | Alu | AluSx |
CAediting_791265 | chr11_651140_- | SINE | Alu | AluSx |
CAediting_791266 | chr11_651141_- | SINE | Alu | AluSx |
CAediting_791267 | chr11_651145_- | SINE | Alu | AluSx |
CAediting_791268 | chr11_651151_- | SINE | Alu | AluSx |
CAediting_791269 | chr11_651158_- | SINE | Alu | AluSx |
CAediting_791270 | chr11_651159_- | SINE | Alu | AluSx |
CAediting_791271 | chr11_651166_- | SINE | Alu | AluSx |
CAediting_791272 | chr11_651167_- | SINE | Alu | AluSx |
CAediting_791273 | chr11_651176_- | SINE | Alu | AluSx |
CAediting_791274 | chr11_651181_- | SINE | Alu | AluSx |
CAediting_791275 | chr11_651187_- | SINE | Alu | AluSx |
CAediting_791276 | chr11_651197_- | SINE | Alu | AluSx |
CAediting_791277 | chr11_651200_- | SINE | Alu | AluSx |
CAediting_791278 | chr11_651206_- | SINE | Alu | AluSx |
CAediting_791279 | chr11_651232_- | SINE | Alu | AluSx |
CAediting_791280 | chr11_651241_- | SINE | Alu | AluSx |
CAediting_791281 | chr11_651249_- | SINE | Alu | AluSx |
CAediting_791282 | chr11_651251_- | SINE | Alu | AluSx |
CAediting_791284 | chr11_651293_- | SINE | Alu | FLAM_C |
CAediting_791285 | chr11_651302_- | SINE | Alu | FLAM_C |
CAediting_791286 | chr11_651309_- | SINE | Alu | FLAM_C |
CAediting_791287 | chr11_651312_- | SINE | Alu | FLAM_C |
CAediting_791288 | chr11_651324_- | SINE | Alu | FLAM_C |
CAediting_791289 | chr11_651330_- | SINE | Alu | FLAM_C |
CAediting_791290 | chr11_651331_- | SINE | Alu | FLAM_C |
CAediting_791291 | chr11_651332_- | SINE | Alu | FLAM_C |
CAediting_791292 | chr11_651340_- | SINE | Alu | FLAM_C |
CAediting_791293 | chr11_651345_- | SINE | Alu | FLAM_C |
CAediting_791294 | chr11_651353_- | SINE | Alu | FLAM_C |
CAediting_791295 | chr11_651383_- | SINE | Alu | FLAM_C |
CAediting_791296 | chr11_651386_- | SINE | Alu | FLAM_C |
CAediting_791297 | chr11_651395_- | SINE | Alu | FLAM_C |
CAediting_791298 | chr11_651605_- | SINE | Alu | AluY |
CAediting_791299 | chr11_651625_- | SINE | Alu | AluY |
CAediting_791300 | chr11_651627_- | SINE | Alu | AluY |
CAediting_791301 | chr11_651630_- | SINE | Alu | AluY |
CAediting_791302 | chr11_651639_- | SINE | Alu | AluY |
CAediting_791303 | chr11_651652_- | SINE | Alu | AluY |
CAediting_791304 | chr11_651693_- | SINE | Alu | AluY |
CAediting_791305 | chr11_651697_- | SINE | Alu | AluY |
CAediting_791306 | chr11_651713_- | SINE | Alu | AluY |
CAediting_791307 | chr11_651719_- | SINE | Alu | AluY |
CAediting_791308 | chr11_651722_- | SINE | Alu | AluY |
CAediting_791309 | chr11_651728_- | SINE | Alu | AluY |
CAediting_791310 | chr11_651751_- | SINE | Alu | AluY |
CAediting_791311 | chr11_651762_- | SINE | Alu | AluY |
CAediting_791312 | chr11_651764_- | SINE | Alu | AluY |
CAediting_791313 | chr11_651767_- | SINE | Alu | AluY |
CAediting_791314 | chr11_651774_- | SINE | Alu | AluY |
CAediting_791315 | chr11_651786_- | SINE | Alu | AluY |
CAediting_791316 | chr11_651804_- | SINE | Alu | AluY |
CAediting_791317 | chr11_651823_- | SINE | Alu | AluY |
CAediting_791318 | chr11_651824_- | SINE | Alu | AluY |
CAediting_791319 | chr11_651839_- | SINE | Alu | AluY |
CAediting_791320 | chr11_651848_- | SINE | Alu | AluY |
CAediting_791321 | chr11_651884_- | SINE | Alu | AluY |
CAediting_791322 | chr11_652378_- | SINE | Alu | AluSz |
CAediting_791323 | chr11_652394_- | SINE | Alu | AluSz |
CAediting_791324 | chr11_652420_- | SINE | Alu | AluSz |
CAediting_791325 | chr11_652421_- | SINE | Alu | AluSz |
CAediting_791326 | chr11_652435_- | SINE | Alu | AluSz |
CAediting_791327 | chr11_652458_- | SINE | Alu | AluSz |
CAediting_791328 | chr11_652472_- | SINE | Alu | AluSz |
CAediting_791329 | chr11_652475_- | SINE | Alu | AluSz |
CAediting_791330 | chr11_652483_- | SINE | Alu | AluSz |
CAediting_791331 | chr11_652489_- | SINE | Alu | AluSz |
CAediting_791332 | chr11_652490_- | SINE | Alu | AluSz |
CAediting_791333 | chr11_652506_- | SINE | Alu | AluSz |
CAediting_791334 | chr11_652514_- | SINE | Alu | AluSz |
CAediting_791335 | chr11_652516_- | SINE | Alu | AluSz |
CAediting_791336 | chr11_652526_- | SINE | Alu | AluSz |
CAediting_791337 | chr11_652529_- | SINE | Alu | AluSz |
CAediting_791338 | chr11_652538_- | SINE | Alu | AluSz |
CAediting_791339 | chr11_652555_- | SINE | Alu | AluSz |
CAediting_791340 | chr11_652556_- | SINE | Alu | AluSz |
CAediting_791341 | chr11_652617_- | SINE | Alu | AluSz |
CAediting_791342 | chr11_652632_- | SINE | Alu | AluSz |
CAediting_791343 | chr11_652634_- | SINE | Alu | AluSz |
CAediting_791344 | chr11_652891_- | SINE | Alu | AluSx |
CAediting_791345 | chr11_652944_- | SINE | Alu | AluSx |
CAediting_791346 | chr11_653001_- | SINE | Alu | AluSx |
CAediting_791347 | chr11_654206_- | SINE | Alu | AluSg7 |
CAediting_791348 | chr11_654261_- | SINE | Alu | AluSg7 |
CAediting_791349 | chr11_654265_- | SINE | Alu | AluSg7 |
CAediting_791350 | chr11_654266_- | SINE | Alu | AluSg7 |
CAediting_791351 | chr11_654274_- | SINE | Alu | AluSg7 |
CAediting_791352 | chr11_654280_- | SINE | Alu | AluSg7 |
CAediting_791353 | chr11_654299_- | SINE | Alu | AluSg7 |
CAediting_791354 | chr11_654307_- | SINE | Alu | AluSg7 |
CAediting_791355 | chr11_654331_- | SINE | Alu | AluSg7 |
CAediting_791356 | chr11_654340_- | SINE | Alu | AluSg7 |
CAediting_791357 | chr11_654349_- | SINE | Alu | AluSg7 |
CAediting_791358 | chr11_654411_- | SINE | Alu | AluSg7 |
CAediting_791359 | chr11_654630_- | SINE | Alu | AluSx1 |
CAediting_791360 | chr11_654649_- | SINE | Alu | AluSx1 |
CAediting_791361 | chr11_654706_- | SINE | Alu | AluSx1 |
CAediting_791362 | chr11_654729_- | SINE | Alu | AluSx1 |
CAediting_791363 | chr11_654787_- | SINE | Alu | AluSx1 |
CAediting_791364 | chr11_654868_- | SINE | Alu | AluSx1 |
CAediting_791365 | chr11_654912_- | SINE | Alu | AluY |
CAediting_791366 | chr11_654914_- | SINE | Alu | AluY |
CAediting_791367 | chr11_654926_- | SINE | Alu | AluY |
CAediting_791368 | chr11_654936_- | SINE | Alu | AluY |
CAediting_791369 | chr11_654941_- | SINE | Alu | AluY |
CAediting_791370 | chr11_654981_- | SINE | Alu | AluY |
CAediting_791372 | chr11_655880_- | SINE | Alu | AluSz |
CAediting_791373 | chr11_655887_- | SINE | Alu | AluSz |
CAediting_791374 | chr11_656349_- | SINE | Alu | AluSx1 |
CAediting_791375 | chr11_656395_- | SINE | Alu | AluSx1 |
CAediting_791376 | chr11_656404_- | SINE | Alu | AluSx1 |
CAediting_791377 | chr11_656430_- | SINE | Alu | AluSx1 |
CAediting_791378 | chr11_658329_- | SINE | Alu | AluY |
CAediting_791379 | chr11_659135_- | SINE | Alu | AluJb |
CAediting_791380 | chr11_659174_- | SINE | Alu | AluJb |
CAediting_791381 | chr11_659175_- | SINE | Alu | AluJb |
CAediting_791382 | chr11_659274_- | SINE | Alu | AluJb |
CAediting_791383 | chr11_659277_- | SINE | Alu | AluJb |
CAediting_791384 | chr11_659293_- | SINE | Alu | AluJb |
CAediting_791385 | chr11_659307_- | SINE | Alu | AluJb |
CAediting_791386 | chr11_659310_- | SINE | Alu | AluJb |
CAediting_791387 | chr11_659311_- | SINE | Alu | AluJb |
CAediting_791388 | chr11_659317_- | SINE | Alu | AluJb |
CAediting_791389 | chr11_659324_- | SINE | Alu | AluJb |
CAediting_791390 | chr11_659331_- | SINE | Alu | AluJb |
CAediting_791391 | chr11_659336_- | SINE | Alu | AluJb |
CAediting_791392 | chr11_659341_- | SINE | Alu | AluJb |
CAediting_791393 | chr11_659371_- | SINE | Alu | AluJb |
CAediting_791394 | chr11_659391_- | SINE | Alu | AluJb |
CAediting_791395 | chr11_663259_- | SINE | Alu | AluSx |
CAediting_791397 | chr11_681273_- | SINE | Alu | AluSq |
CAediting_791398 | chr11_681302_- | SINE | Alu | AluSq |
CAediting_791399 | chr11_681303_- | SINE | Alu | AluSq |
CAediting_791400 | chr11_681307_- | SINE | Alu | AluSq |
CAediting_791401 | chr11_681308_- | SINE | Alu | AluSq |
CAediting_791402 | chr11_681369_- | SINE | Alu | AluSq |
CAediting_791403 | chr11_681370_- | SINE | Alu | AluSq |
CAediting_791404 | chr11_681539_- | SINE | Alu | AluY |
CAediting_791405 | chr11_681549_- | SINE | Alu | AluY |
CAediting_791406 | chr11_681571_- | SINE | Alu | AluY |
CAediting_791407 | chr11_681575_- | SINE | Alu | AluY |
CAediting_791408 | chr11_681582_- | SINE | Alu | AluY |
CAediting_791409 | chr11_681588_- | SINE | Alu | AluY |
CAediting_791410 | chr11_681594_- | SINE | Alu | AluY |
CAediting_791411 | chr11_681605_- | SINE | Alu | AluY |
CAediting_791412 | chr11_681677_- | SINE | Alu | AluY |
CAediting_791413 | chr11_684173_- | SINE | Alu | AluSx |
CAediting_791414 | chr11_684183_- | SINE | Alu | AluSx |
CAediting_791415 | chr11_684335_- | SINE | Alu | AluSx |
CAediting_791416 | chr11_685149_- | SINE | Alu | AluSz6 |
CAediting_791417 | chr11_685170_- | SINE | Alu | AluSz6 |
CAediting_791418 | chr11_685200_- | SINE | Alu | AluSz6 |
CAediting_791419 | chr11_685222_- | SINE | Alu | AluSz6 |
CAediting_791420 | chr11_685225_- | SINE | Alu | AluSz6 |
CAediting_791421 | chr11_689241_- | SINE | Alu | AluY |
CAediting_791422 | chr11_689282_- | SINE | Alu | AluY |
CAediting_791423 | chr11_689303_- | SINE | Alu | AluY |
CAediting_791424 | chr11_689309_- | SINE | Alu | AluY |
CAediting_791425 | chr11_689330_- | SINE | Alu | AluY |
CAediting_791426 | chr11_689344_- | SINE | Alu | AluY |
CAediting_791427 | chr11_689373_- | SINE | Alu | AluY |
CAediting_791428 | chr11_689377_- | SINE | Alu | AluY |
CAediting_791429 | chr11_689392_- | SINE | Alu | AluY |
CAediting_791430 | chr11_689401_- | SINE | Alu | AluY |
CAediting_791431 | chr11_689408_- | SINE | Alu | AluY |
CAediting_791432 | chr11_689414_- | SINE | Alu | AluY |
CAediting_791433 | chr11_689437_- | SINE | Alu | AluY |
CAediting_791434 | chr11_689438_- | SINE | Alu | AluY |
CAediting_791435 | chr11_689440_- | SINE | Alu | AluY |
CAediting_791436 | chr11_689475_- | SINE | Alu | AluY |
CAediting_791437 | chr11_689478_- | SINE | Alu | AluY |
CAediting_791438 | chr11_689483_- | SINE | Alu | AluY |
CAediting_791439 | chr11_689484_- | SINE | Alu | AluY |
CAediting_791440 | chr11_690566_- | SINE | Alu | AluSx |
CAediting_791441 | chr11_690580_- | SINE | Alu | AluSx |
CAediting_791442 | chr11_690622_- | SINE | Alu | AluSx |
CAediting_791443 | chr11_690624_- | SINE | Alu | AluSx |
CAediting_791444 | chr11_690646_- | SINE | Alu | AluSx |
CAediting_791445 | chr11_690659_- | SINE | Alu | AluSx |
CAediting_791446 | chr11_690664_- | SINE | Alu | AluSx |
CAediting_791447 | chr11_690689_- | SINE | Alu | AluSx |
CAediting_791448 | chr11_690700_- | SINE | Alu | AluSx |
Top |
RNA A-to-I editing events in the alternative splicing sites for DEAF1 |
RNA A-to-I editing(s) in the alternative splicing sites. |
AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
ES | CAediting_791111 | chr11_646249_- | 646247:646269 | 3SS | 1+0i | TTTTTTTTTTTTTTTTTGAGACG | 3.97 | TTTTTTTTTTTTTTTTTGAGGCG | 5.52 |
MEX_1 | CAediting_791111 | chr11_646249_- | 646247:646269 | 3SS | 1+0i | TTTTTTTTTTTTTTTTTGAGACG | 3.97 | TTTTTTTTTTTTTTTTTGAGGCG | 5.52 |
ES | CAediting_791162 | chr11_649943_- | 649936:649944 | 5SS | 2+0i | AAGTGATTT | -8.52 | AGGTGATTT | -11.62 |
MEX_2 | CAediting_791162 | chr11_649943_- | 649936:649944 | 5SS | 2+0i | AAGTGATTT | -8.52 | AGGTGATTT | -11.62 |
MEX_1 | CAediting_791162 | chr11_649943_- | 649936:649944 | 5SS | 2+0i | AAGTGATTT | -8.52 | AGGTGATTT | -11.62 |
ES | CAediting_791269 | chr11_651158_- | 651155:651163 | 5SS | 0+3i | TGGTAAGAC | -17.11 | TGGTAGGAC | -22.22 |
MEX_2 | CAediting_791269 | chr11_651158_- | 651155:651163 | 5SS | 0+3i | TGGTAAGAC | -17.11 | TGGTAGGAC | -22.22 |
MEX_1 | CAediting_791269 | chr11_651158_- | 651155:651163 | 5SS | 0+3i | TGGTAAGAC | -17.11 | TGGTAGGAC | -22.22 |
ES | CAediting_791270 | chr11_651159_- | 651155:651163 | 5SS | 0+2i | TGGTAAGAC | -17.11 | TGGTGAGAC | -16.57 |
MEX_2 | CAediting_791270 | chr11_651159_- | 651155:651163 | 5SS | 0+2i | TGGTAAGAC | -17.11 | TGGTGAGAC | -16.57 |
MEX_1 | CAediting_791270 | chr11_651159_- | 651155:651163 | 5SS | 0+2i | TGGTAAGAC | -17.11 | TGGTGAGAC | -16.57 |
ES | CAediting_791283 | chr11_651259_- | 651255:651277 | 3SS | 0+2i | TTAAAATTTACTTTTTCTAGCTG | 6.68 | TTAAAATTTACTTTTTCTGGCTG | -1.28 |
MEX_2 | CAediting_791283 | chr11_651259_- | 651255:651277 | 3SS | 0+2i | TTAAAATTTACTTTTTCTAGCTG | 6.68 | TTAAAATTTACTTTTTCTGGCTG | -1.28 |
MEX_1 | CAediting_791283 | chr11_651259_- | 651255:651277 | 3SS | 0+2i | TTAAAATTTACTTTTTCTAGCTG | 6.68 | TTAAAATTTACTTTTTCTGGCTG | -1.28 |
ES | CAediting_791316 | chr11_651804_- | 651802:651810 | 5SS | 0+4i | AGGTTCACG | -12.18 | AGGTTCGCG | -17.94 |
MEX_2 | CAediting_791316 | chr11_651804_- | 651802:651810 | 5SS | 0+4i | AGGTTCACG | -12.18 | AGGTTCGCG | -17.94 |
ES | CAediting_791361 | chr11_654706_- | 654699:654721 | 3SS | 0+5i | AATTTTTGTATTTTTAGTAGAGA | 2.24 | AATTTTTGTATTTTTGGTAGAGA | 3.66 |
ES | CAediting_791361 | chr11_654706_- | 654702:654724 | 3SS | 0+2i | GCTAATTTTTGTATTTTTAGTAG | 3.6 | GCTAATTTTTGTATTTTTGGTAG | -4.36 |
MEX_1 | CAediting_791361 | chr11_654706_- | 654699:654721 | 3SS | 0+5i | AATTTTTGTATTTTTAGTAGAGA | 2.24 | AATTTTTGTATTTTTGGTAGAGA | 3.66 |
MEX_1 | CAediting_791361 | chr11_654706_- | 654702:654724 | 3SS | 0+2i | GCTAATTTTTGTATTTTTAGTAG | 3.6 | GCTAATTTTTGTATTTTTGGTAG | -4.36 |
Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000177030.15.DEAF1. |
Correlation between RNA A-to-I editing and PSI for ENSG00000177030.15.DEAF1. |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for DEAF1 |
Differential gene expressions between RNA A-to-I edited and non-edited tumor samples. * The grey color means N/A. |
Correlation between RNA A-to-I editing and gene expression. |
- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
ESCA.CAediting_791288.ENSG00000177030.DEAF1.png |
ESCA.CAediting_791289.ENSG00000177030.DEAF1.png |
OV.CAediting_791288.ENSG00000177030.DEAF1.png |
Top |
Protein coding region RNA A-to-I editings for DEAF1 |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for DEAF1 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_791271 | chr11_651166_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-3146 | 651163 | 651169 | 7mer-m8 | 651162 | 651183 | 141.00 | -17.40 |
CAediting_791271 | chr11_651166_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-449c-3p | 651164 | 651169 | 6mer | 651163 | 651185 | 144.00 | -14.31 |
CAediting_791272 | chr11_651167_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-3157-5p | 651166 | 651172 | 7mer-m8 | 651165 | 651186 | 163.00 | -21.86 |
CAediting_791280 | chr11_651241_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-4634 | 651237 | 651243 | 7mer-m8 | 651236 | 651259 | 147.00 | -29.32 |
CAediting_791275 | chr11_651187_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-6771-3p | 651183 | 651189 | 7mer-m8 | 651182 | 651202 | 149.00 | -23.14 |
CAediting_791277 | chr11_651200_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-1180-5p | 651197 | 651204 | 8mer-1a | 651197 | 651218 | 151.00 | -24.38 |
CAediting_791277 | chr11_651200_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-7114-3p | 651197 | 651204 | 8mer-1a | 651197 | 651217 | 159.00 | -28.23 |
CAediting_791277 | chr11_651200_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-7973 | 651196 | 651202 | 7mer-m8 | 651195 | 651214 | 140.00 | -13.30 |
CAediting_791277 | chr11_651200_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-7973 | 651196 | 651202 | 7mer-m8 | 651195 | 651214 | 140.00 | -13.30 |
CAediting_791279 | chr11_651232_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-92b-5p | 651227 | 651233 | 7mer-1a | 651227 | 651249 | 141.00 | -22.69 |
CAediting_791283 | chr11_651259_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-9902 | 651258 | 651264 | 7mer-m8 | 651257 | 651278 | 140.00 | -13.21 |
CAediting_791283 | chr11_651259_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-9902 | 651258 | 651264 | 7mer-m8 | 651257 | 651278 | 140.00 | -13.21 |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_791273 | chr11_651176_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-320e | 651172 | 651178 | 7mer-m8 | 651171 | 651188 | 151 | -12.57 |
CAediting_791273 | chr11_651176_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-3663-5p | 651175 | 651181 | 7mer-m8 | 651174 | 651194 | 140 | -24.15 |
CAediting_791274 | chr11_651181_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-371a-5p | 651179 | 651186 | 8mer-1a | 651179 | 651198 | 146 | -15.8 |
CAediting_791281 | chr11_651249_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-4252 | 651244 | 651250 | 7mer-m8 | 651243 | 651262 | 154 | -21.36 |
CAediting_791272 | chr11_651167_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-4662a-5p | 651166 | 651173 | 8mer-1a | 651166 | 651191 | 146 | -17.07 |
CAediting_791279 | chr11_651232_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-5187-5p | 651227 | 651234 | 8mer-1a | 651227 | 651249 | 151 | -20.8 |
CAediting_791281 | chr11_651249_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-550b-2-5p | 651249 | 651254 | 6mer | 651248 | 651268 | 142 | -18.41 |
CAediting_791282 | chr11_651251_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-550b-2-5p | 651249 | 651254 | 6mer | 651248 | 651268 | 142 | -18.41 |
CAediting_791281 | chr11_651249_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-550b-2-5p | 651249 | 651254 | 6mer | 651248 | 651268 | 142 | -18.41 |
CAediting_791282 | chr11_651251_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-550b-2-5p | 651249 | 651254 | 6mer | 651248 | 651268 | 142 | -18.41 |
CAediting_791276 | chr11_651197_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-598-5p | 651194 | 651200 | 7mer-m8 | 651193 | 651215 | 151 | -24.59 |
CAediting_791273 | chr11_651176_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-6131 | 651174 | 651180 | 7mer-m8 | 651173 | 651191 | 140 | -13.79 |
CAediting_791276 | chr11_651197_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-640 | 651197 | 651203 | 7mer-m8 | 651196 | 651212 | 154 | -24.81 |
CAediting_791277 | chr11_651200_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-640 | 651197 | 651203 | 7mer-m8 | 651196 | 651212 | 154 | -24.81 |
CAediting_791283 | chr11_651259_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-6508-5p | 651258 | 651264 | 7mer-m8 | 651257 | 651277 | 140 | -6.48 |
CAediting_791281 | chr11_651249_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-6529-3p | 651248 | 651254 | 7mer-m8 | 651247 | 651268 | 141 | -13.05 |
CAediting_791282 | chr11_651251_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-6529-3p | 651248 | 651254 | 7mer-m8 | 651247 | 651268 | 141 | -13.05 |
CAediting_791279 | chr11_651232_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-6744-5p | 651229 | 651235 | 7mer-m8 | 651228 | 651248 | 155 | -22.58 |
CAediting_791278 | chr11_651206_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-6747-3p | 651204 | 651210 | 7mer-m8 | 651203 | 651224 | 150 | -22.65 |
CAediting_791280 | chr11_651241_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-6807-5p | 651241 | 651247 | 7mer-m8 | 651240 | 651261 | 147 | -20.75 |
CAediting_791284 | chr11_651293_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-6842-3p | 651292 | 651299 | 8mer-1a | 651292 | 651314 | 154 | -21.69 |
CAediting_791273 | chr11_651176_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-6843-3p | 651176 | 651182 | 7mer-m8 | 651175 | 651195 | 155 | -20.38 |
CAediting_791274 | chr11_651181_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-6843-3p | 651176 | 651182 | 7mer-m8 | 651175 | 651195 | 155 | -20.38 |
CAediting_791273 | chr11_651176_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-6848-3p | 651176 | 651182 | 7mer-m8 | 651175 | 651192 | 147 | -18.57 |
CAediting_791274 | chr11_651181_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-6848-3p | 651176 | 651182 | 7mer-m8 | 651175 | 651192 | 147 | -18.57 |
CAediting_791281 | chr11_651249_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-6889-3p | 651248 | 651254 | 7mer-m8 | 651247 | 651268 | 147 | -16.7 |
CAediting_791282 | chr11_651251_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-6889-3p | 651248 | 651254 | 7mer-m8 | 651247 | 651268 | 147 | -16.7 |
CAediting_791281 | chr11_651249_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-7157-3p | 651248 | 651253 | 6mer | 651247 | 651270 | 145 | -20.71 |
CAediting_791282 | chr11_651251_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-7157-3p | 651248 | 651253 | 6mer | 651247 | 651270 | 145 | -20.71 |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1054808 | chr15_66496985_- | ENSG00000177030.15 | ENST00000527170 | hsa-miR-4512 | 644480 | 644486 | 7mer-m8 | 644479 | 644503 | 144 | -24.69 |
CAediting_1054808 | chr15_66496985_- | ENSG00000177030.15 | ENST00000382409 | hsa-miR-4512 | 644480 | 644486 | 7mer-m8 | 644479 | 644503 | 144 | -24.69 |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for DEAF1 |
- RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
RNA A-to-I editing in RNA structures for Minimum free energy (MFE). |
CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for DEAF1 |
Correlation between ADAR gene expression and RNA editing frequency |
Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
BRCA | CAediting_791288 | chr11_651324_- | 0.000551250524171799 | 0.419944196946322 | . | . | . | . |
THCA | CAediting_791288 | chr11_651324_- | 0.0431204376702664 | 0.251694705511757 | . | . | . | . |
OV | CAediting_791288 | chr11_651324_- | 0.035143058443522 | 0.178219003443701 | . | . | . | . |
BRCA | CAediting_791289 | chr11_651330_- | 0.00050695226945265 | 0.375583097395526 | . | . | . | . |
OV | CAediting_791289 | chr11_651330_- | 0.0461387343396462 | 0.17130954475335 | . | . | . | . |
LGG | CAediting_791295 | chr11_651383_- | . | . | 0.000109339295640629 | 0.322264813402425 | . | . |
BRCA | CAediting_791295 | chr11_651383_- | 0.0225607339550792 | 0.264891068860593 | . | . | . | . |
Top |
Relation with cancer stages for DEAF1 |
Correlation between Cancer stages and RNA editing frequency |
Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
BRCA | pathologic_stage | CAediting_791295 | chr11_651383_- | 0.0445930611073693 | 0.235817534094209 |
OV | clinical_stage | CAediting_791198 | chr11_650694_- | 0.0118767087313712 | 0.343187597671399 |
OV | clinical_stage | CAediting_791205 | chr11_650736_- | 0.0289511232889531 | 0.202007201910306 |
OV | clinical_stage | CAediting_791212 | chr11_650797_- | 0.00118328597665357 | 0.282432477549245 |
OV | clinical_stage | CAediting_791228 | chr11_650879_- | 0.0123692191269232 | 0.167641690739771 |
OV | clinical_stage | CAediting_791269 | chr11_651158_- | 0.0471915415980174 | 0.279263520733509 |
STAD | pathologic_stage | CAediting_791212 | chr11_650797_- | 0.0131655813191565 | 0.318391243043955 |
Top |
Relation with survival for DEAF1 |
Correlation between RNA editing and survival |
Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
LGG | CAediting_791229 | chr11_650887_- | 0.00210988593854899 | 0.0282486 | 3218.9 |
Top |
RelatedDrugs for DEAF1 |
Approved drugs targeting this gene. (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for DEAF1 |
Diseases associated with this gene. (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
DEAF1 | C0041696 | Unipolar Depression | 5 | PSYGENET |
DEAF1 | C1269683 | Major Depressive Disorder | 5 | PSYGENET |
DEAF1 | C0011570 | Mental Depression | 4 | PSYGENET |
DEAF1 | C0011581 | Depressive disorder | 4 | PSYGENET |
DEAF1 | C4014414 | MENTAL RETARDATION, AUTOSOMAL DOMINANT 24 | 3 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
DEAF1 | C4310683 | DYSKINESIA, SEIZURES, AND INTELLECTUAL DEVELOPMENTAL DISORDER | 3 | CTD_human;GENOMICS_ENGLAND;ORPHANET |
DEAF1 | C0020796 | Profound Mental Retardation | 1 | CTD_human |
DEAF1 | C0025363 | Mental Retardation, Psychosocial | 1 | CTD_human |
DEAF1 | C0795864 | Smith-Magenis syndrome | 1 | ORPHANET |
DEAF1 | C0917816 | Mental deficiency | 1 | CTD_human |
DEAF1 | C3714756 | Intellectual Disability | 1 | CTD_human |