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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: CEACAM5 (CAeditome ID:1048)

Gene summary for CEACAM5

check button Gene summary
Gene informationGene symbol

CEACAM5

Gene ID

1048

Gene nameCEA cell adhesion molecule 5
SynonymsCD66e|CEA
Cytomap

19q13.2

Type of geneprotein-coding
Descriptioncarcinoembryonic antigen-related cell adhesion molecule 5carcinoembryonic antigen related cell adhesion molecule 5meconium antigen 100
Modification date20210518
UniProtAcc

P06731

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
CEACAM5

GO:0042802

Carcinoembryonic antigen-related cell adhesion molecule 5

26483485

CEACAM5

GO:0042803

Carcinoembryonic antigen-related cell adhesion molecule 5

18086185

CEACAM5

GO:0010832

Carcinoembryonic antigen-related cell adhesion molecule 5

10931872

CEACAM5

GO:0010832

Carcinoembryonic antigen-related cell adhesion molecule 5

8408226

CEACAM5

GO:0034109

Carcinoembryonic antigen-related cell adhesion molecule 5

10864933

CEACAM5

GO:0043066

Carcinoembryonic antigen-related cell adhesion molecule 5

11448920

CEACAM5

GO:2000811

Carcinoembryonic antigen-related cell adhesion molecule 5

10910050

CEACAM5

GO:0005886

Carcinoembryonic antigen-related cell adhesion molecule 5

0000052

CEACAM5

GO:0005887

Carcinoembryonic antigen-related cell adhesion molecule 5

10931872

CEACAM5

GO:0009986

Carcinoembryonic antigen-related cell adhesion molecule 5

2317824

CEACAM5

GO:0016323

Carcinoembryonic antigen-related cell adhesion molecule 5

15052268

CEACAM5

GO:0016324

Carcinoembryonic antigen-related cell adhesion molecule 5

10436421

CEACAM5

GO:0031225

Carcinoembryonic antigen-related cell adhesion molecule 5

2317824

CEACAM5

GO:0071575

Carcinoembryonic antigen-related cell adhesion molecule 5

10864933


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RNA A-to-I events for CEACAM5

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000105388.13
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1356323(41616123, +), CAediting_1356324(41641423, +), CAediting_1356325(41713182, +), CAediting_1356326(41713324, +), CAediting_1356327(41714025, +), CAediting_1356328(41714050, +), CAediting_1356329(41720562, +), CAediting_1356330(41720571, +), CAediting_1356331(41720600, +), CAediting_1356332(41720608, +), CAediting_1356333(41720636, +), CAediting_1356334(41720646, +), CAediting_1356335(41720650, +), CAediting_1356336(41720652, +), CAediting_1356337(41720684, +), CAediting_1356338(41720690, +), CAediting_1356339(41720707, +), CAediting_1356340(41720710, +), CAediting_1356341(41720761, +), CAediting_1356342(41720762, +), CAediting_1356343(41720774, +), CAediting_1356344(41720792, +), CAediting_1356345(41722142, +), CAediting_1356346(41722143, +), CAediting_1356347(41722164, +), CAediting_1356348(41722165, +), CAediting_1356349(41722170, +), CAediting_1356350(41722178, +), CAediting_1356351(41722221, +), CAediting_1356352(41722243, +), CAediting_1356353(41722244, +), CAediting_1356354(41722249, +), CAediting_1356355(41722253, +), CAediting_1356356(41722284, +), CAediting_1356357(41722285, +), CAediting_1356358(41722314, +), CAediting_1356359(41722329, +), CAediting_1356360(41722927, +), CAediting_1356361(41722958, +), CAediting_1356362(41722963, +), CAediting_1356363(41722972, +), CAediting_1356364(41722982, +), CAediting_1356365(41722987, +), CAediting_1356366(41722988, +), CAediting_1356367(41723012, +), CAediting_1356368(41723025, +), CAediting_1356369(41723034, +), CAediting_1356370(41723049, +), CAediting_1356371(41723094, +), CAediting_1356372(41723097, +), CAediting_1356373(41723111, +), CAediting_1356374(41723123, +), CAediting_1356375(41723173, +), CAediting_1356376(41723174, +), CAediting_1356377(41723186, +), CAediting_1356378(41723692, +), CAediting_1356379(41723693, +), CAediting_1356380(41723719, +), CAediting_1356381(41723730, +), CAediting_1356382(41723731, +), CAediting_1356383(41723736, +), CAediting_1356384(41723744, +), CAediting_1356385(41723759, +), CAediting_1356386(41723760, +), CAediting_1356387(41723762, +), CAediting_1356388(41723764, +), CAediting_1356389(41723770, +), CAediting_1356390(41723806, +), CAediting_1356391(41723828, +), CAediting_1356392(41723834, +), CAediting_1356393(41723838, +), CAediting_1356394(41723842, +), CAediting_1356395(41723843, +), CAediting_1356396(41723845, +), CAediting_1356397(41723851, +), CAediting_1356398(41723855, +), CAediting_1356399(41723861, +), CAediting_1356400(41723866, +), CAediting_1356401(41723870, +), CAediting_1356402(41723874, +), CAediting_1356403(41723877, +), CAediting_1356404(41723881, +), CAediting_1356405(41723890, +), CAediting_1356406(41723894, +), CAediting_1356407(41723901, +), CAediting_1356408(41723906, +), CAediting_1356409(41725419, +), CAediting_1356410(41725426, +), CAediting_1356411(41725440, +), CAediting_1356412(41725445, +), CAediting_1356413(41725450, +), CAediting_1356414(41725457, +), CAediting_1356415(41725464, +), CAediting_1356416(41725470, +), CAediting_1356417(41725471, +), CAediting_1356418(41725499, +), CAediting_1356419(41725509, +), CAediting_1356420(41725513, +), CAediting_1356421(41725535, +), CAediting_1356422(41725608, +), CAediting_1356423(41725611, +), CAediting_1356424(41725612, +), CAediting_1356425(41725625, +), CAediting_1356426(41725634, +), CAediting_1356427(41725647, +), CAediting_1356428(41728521, +), CAediting_1356429(41728531, +), CAediting_1356430(41728537, +), CAediting_1356431(41728599, +), CAediting_1356432(41728629, +), CAediting_1356433(41728667, +), CAediting_1356434(41728680, +), CAediting_1356435(41728682, +), CAediting_1356436(41728715, +), CAediting_1356437(41728728, +), CAediting_1356438(41729284, +), CAediting_1356439(41729294, +), CAediting_1356440(41729299, +), CAediting_1356441(41729308, +), CAediting_1356442(41729314, +), CAediting_1356443(41729323, +), CAediting_1356444(41729325, +), CAediting_1356445(41729329, +), CAediting_1356446(41729358, +), CAediting_1356447(41729397, +), CAediting_1356448(41729405, +), CAediting_1356449(41729406, +), CAediting_1356450(41729487, +), CAediting_1356451(41729492, +), CAediting_1356452(41729496, +), CAediting_1356453(41729497, +),

Top

RNA editing positional annotations for CEACAM5 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1356323chr19_41616123_+intronic
CAediting_1356324chr19_41641423_+intronic
CAediting_1356325chr19_41713182_+ncRNA_intronic
CAediting_1356326chr19_41713324_+ncRNA_intronic
CAediting_1356327chr19_41714025_+ncRNA_intronic
CAediting_1356328chr19_41714050_+ncRNA_intronic
CAediting_1356329chr19_41720562_+intronic
CAediting_1356330chr19_41720571_+intronic
CAediting_1356331chr19_41720600_+intronic
CAediting_1356332chr19_41720608_+intronic
CAediting_1356333chr19_41720636_+intronic
CAediting_1356334chr19_41720646_+intronic
CAediting_1356335chr19_41720650_+intronic
CAediting_1356336chr19_41720652_+intronic
CAediting_1356337chr19_41720684_+intronic
CAediting_1356338chr19_41720690_+intronic
CAediting_1356339chr19_41720707_+intronic
CAediting_1356340chr19_41720710_+intronic
CAediting_1356341chr19_41720761_+intronic
CAediting_1356342chr19_41720762_+intronic
CAediting_1356343chr19_41720774_+intronic
CAediting_1356344chr19_41720792_+intronic
CAediting_1356345chr19_41722142_+intronic
CAediting_1356346chr19_41722143_+intronic
CAediting_1356347chr19_41722164_+intronic
CAediting_1356348chr19_41722165_+intronic
CAediting_1356349chr19_41722170_+intronic
CAediting_1356350chr19_41722178_+intronic
CAediting_1356351chr19_41722221_+intronic
CAediting_1356352chr19_41722243_+intronic
CAediting_1356353chr19_41722244_+intronic
CAediting_1356354chr19_41722249_+intronic
CAediting_1356355chr19_41722253_+intronic
CAediting_1356356chr19_41722284_+intronic
CAediting_1356357chr19_41722285_+intronic
CAediting_1356358chr19_41722314_+intronic
CAediting_1356359chr19_41722329_+intronic
CAediting_1356360chr19_41722927_+intronic
CAediting_1356361chr19_41722958_+intronic
CAediting_1356362chr19_41722963_+intronic
CAediting_1356363chr19_41722972_+intronic
CAediting_1356364chr19_41722982_+intronic
CAediting_1356365chr19_41722987_+intronic
CAediting_1356366chr19_41722988_+intronic
CAediting_1356367chr19_41723012_+intronic
CAediting_1356368chr19_41723025_+intronic
CAediting_1356369chr19_41723034_+intronic
CAediting_1356370chr19_41723049_+intronic
CAediting_1356371chr19_41723094_+intronic
CAediting_1356372chr19_41723097_+intronic
CAediting_1356373chr19_41723111_+intronic
CAediting_1356374chr19_41723123_+intronic
CAediting_1356375chr19_41723173_+intronic
CAediting_1356376chr19_41723174_+intronic
CAediting_1356377chr19_41723186_+intronic
CAediting_1356378chr19_41723692_+intronic
CAediting_1356379chr19_41723693_+intronic
CAediting_1356380chr19_41723719_+intronic
CAediting_1356381chr19_41723730_+intronic
CAediting_1356382chr19_41723731_+intronic
CAediting_1356383chr19_41723736_+intronic
CAediting_1356384chr19_41723744_+intronic
CAediting_1356385chr19_41723759_+intronic
CAediting_1356386chr19_41723760_+intronic
CAediting_1356387chr19_41723762_+intronic
CAediting_1356388chr19_41723764_+intronic
CAediting_1356389chr19_41723770_+intronic
CAediting_1356390chr19_41723806_+intronic
CAediting_1356391chr19_41723828_+intronic
CAediting_1356392chr19_41723834_+intronic
CAediting_1356393chr19_41723838_+intronic
CAediting_1356394chr19_41723842_+intronic
CAediting_1356395chr19_41723843_+intronic
CAediting_1356396chr19_41723845_+intronic
CAediting_1356397chr19_41723851_+intronic
CAediting_1356398chr19_41723855_+intronic
CAediting_1356399chr19_41723861_+intronic
CAediting_1356400chr19_41723866_+intronic
CAediting_1356401chr19_41723870_+intronic
CAediting_1356402chr19_41723874_+intronic
CAediting_1356403chr19_41723877_+intronic
CAediting_1356404chr19_41723881_+intronic
CAediting_1356405chr19_41723890_+intronic
CAediting_1356406chr19_41723894_+intronic
CAediting_1356407chr19_41723901_+intronic
CAediting_1356408chr19_41723906_+intronic
CAediting_1356409chr19_41725419_+intronic
CAediting_1356410chr19_41725426_+intronic
CAediting_1356411chr19_41725440_+intronic
CAediting_1356412chr19_41725445_+intronic
CAediting_1356413chr19_41725450_+intronic
CAediting_1356414chr19_41725457_+intronic
CAediting_1356415chr19_41725464_+intronic
CAediting_1356416chr19_41725470_+intronic
CAediting_1356417chr19_41725471_+intronic
CAediting_1356418chr19_41725499_+intronic
CAediting_1356419chr19_41725509_+intronic
CAediting_1356420chr19_41725513_+intronic
CAediting_1356421chr19_41725535_+intronic
CAediting_1356422chr19_41725608_+intronic
CAediting_1356423chr19_41725611_+intronic
CAediting_1356424chr19_41725612_+intronic
CAediting_1356425chr19_41725625_+intronic
CAediting_1356426chr19_41725634_+intronic
CAediting_1356427chr19_41725647_+intronic
CAediting_1356428chr19_41728521_+intronic
CAediting_1356429chr19_41728531_+intronic
CAediting_1356430chr19_41728537_+intronic
CAediting_1356431chr19_41728599_+intronic
CAediting_1356432chr19_41728629_+intronic
CAediting_1356433chr19_41728667_+intronic
CAediting_1356434chr19_41728680_+intronic
CAediting_1356435chr19_41728682_+intronic
CAediting_1356436chr19_41728715_+intronic
CAediting_1356437chr19_41728728_+intronic
CAediting_1356438chr19_41729284_+UTR3
CAediting_1356439chr19_41729294_+UTR3
CAediting_1356440chr19_41729299_+UTR3
CAediting_1356441chr19_41729308_+UTR3
CAediting_1356442chr19_41729314_+UTR3
CAediting_1356443chr19_41729323_+UTR3
CAediting_1356444chr19_41729325_+UTR3
CAediting_1356445chr19_41729329_+UTR3
CAediting_1356446chr19_41729358_+UTR3
CAediting_1356447chr19_41729397_+UTR3
CAediting_1356448chr19_41729405_+UTR3
CAediting_1356449chr19_41729406_+UTR3
CAediting_1356450chr19_41729487_+UTR3
CAediting_1356451chr19_41729492_+UTR3
CAediting_1356452chr19_41729496_+UTR3
CAediting_1356453chr19_41729497_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1356323chr19_41616123_+SINEAluAluSz
CAediting_1356324chr19_41641423_+SINEAluAluSz6
CAediting_1356325chr19_41713182_+SINEAluAluSc
CAediting_1356326chr19_41713324_+SINEAluAluSc
CAediting_1356327chr19_41714025_+SINEAluAluSx1
CAediting_1356328chr19_41714050_+SINEAluAluSx1
CAediting_1356329chr19_41720562_+SINEAluAluSx3
CAediting_1356330chr19_41720571_+SINEAluAluSx3
CAediting_1356331chr19_41720600_+SINEAluAluSx3
CAediting_1356332chr19_41720608_+SINEAluAluSx3
CAediting_1356333chr19_41720636_+SINEAluAluSx3
CAediting_1356334chr19_41720646_+SINEAluAluSx3
CAediting_1356335chr19_41720650_+SINEAluAluSx3
CAediting_1356336chr19_41720652_+SINEAluAluSx3
CAediting_1356337chr19_41720684_+SINEAluAluSx3
CAediting_1356338chr19_41720690_+SINEAluAluSx3
CAediting_1356339chr19_41720707_+SINEAluAluSx3
CAediting_1356340chr19_41720710_+SINEAluAluSx3
CAediting_1356341chr19_41720761_+SINEAluAluSx3
CAediting_1356342chr19_41720762_+SINEAluAluSx3
CAediting_1356343chr19_41720774_+SINEAluAluSx3
CAediting_1356344chr19_41720792_+SINEAluAluSx3
CAediting_1356345chr19_41722142_+SINEAluAluSx1
CAediting_1356346chr19_41722143_+SINEAluAluSx1
CAediting_1356347chr19_41722164_+SINEAluAluSx1
CAediting_1356348chr19_41722165_+SINEAluAluSx1
CAediting_1356349chr19_41722170_+SINEAluAluSx1
CAediting_1356350chr19_41722178_+SINEAluAluSx1
CAediting_1356351chr19_41722221_+SINEAluAluSx1
CAediting_1356352chr19_41722243_+SINEAluAluSx1
CAediting_1356353chr19_41722244_+SINEAluAluSx1
CAediting_1356354chr19_41722249_+SINEAluAluSx1
CAediting_1356355chr19_41722253_+SINEAluAluSx1
CAediting_1356356chr19_41722284_+SINEAluAluSx1
CAediting_1356357chr19_41722285_+SINEAluAluSx1
CAediting_1356358chr19_41722314_+SINEAluAluSx1
CAediting_1356359chr19_41722329_+SINEAluAluSx1
CAediting_1356360chr19_41722927_+SINEAluAluY
CAediting_1356361chr19_41722958_+SINEAluAluY
CAediting_1356362chr19_41722963_+SINEAluAluY
CAediting_1356363chr19_41722972_+SINEAluAluY
CAediting_1356364chr19_41722982_+SINEAluAluY
CAediting_1356365chr19_41722987_+SINEAluAluY
CAediting_1356366chr19_41722988_+SINEAluAluY
CAediting_1356367chr19_41723012_+SINEAluAluY
CAediting_1356368chr19_41723025_+SINEAluAluY
CAediting_1356369chr19_41723034_+SINEAluAluY
CAediting_1356370chr19_41723049_+SINEAluAluY
CAediting_1356371chr19_41723094_+SINEAluAluY
CAediting_1356372chr19_41723097_+SINEAluAluY
CAediting_1356373chr19_41723111_+SINEAluAluY
CAediting_1356374chr19_41723123_+SINEAluAluY
CAediting_1356375chr19_41723173_+SINEAluAluY
CAediting_1356376chr19_41723174_+SINEAluAluY
CAediting_1356377chr19_41723186_+SINEAluAluY
CAediting_1356378chr19_41723692_+SINEAluAluY
CAediting_1356379chr19_41723693_+SINEAluAluY
CAediting_1356380chr19_41723719_+SINEAluAluY
CAediting_1356381chr19_41723730_+SINEAluAluY
CAediting_1356382chr19_41723731_+SINEAluAluY
CAediting_1356383chr19_41723736_+SINEAluAluY
CAediting_1356384chr19_41723744_+SINEAluAluY
CAediting_1356385chr19_41723759_+SINEAluAluY
CAediting_1356386chr19_41723760_+SINEAluAluY
CAediting_1356387chr19_41723762_+SINEAluAluY
CAediting_1356388chr19_41723764_+SINEAluAluY
CAediting_1356389chr19_41723770_+SINEAluAluY
CAediting_1356390chr19_41723806_+SINEAluAluY
CAediting_1356391chr19_41723828_+SINEAluAluY
CAediting_1356392chr19_41723834_+SINEAluAluY
CAediting_1356393chr19_41723838_+SINEAluAluY
CAediting_1356394chr19_41723842_+SINEAluAluY
CAediting_1356395chr19_41723843_+SINEAluAluY
CAediting_1356396chr19_41723845_+SINEAluAluY
CAediting_1356397chr19_41723851_+SINEAluAluY
CAediting_1356398chr19_41723855_+SINEAluAluY
CAediting_1356399chr19_41723861_+SINEAluAluY
CAediting_1356400chr19_41723866_+SINEAluAluY
CAediting_1356401chr19_41723870_+SINEAluAluY
CAediting_1356402chr19_41723874_+SINEAluAluY
CAediting_1356403chr19_41723877_+SINEAluAluY
CAediting_1356404chr19_41723881_+SINEAluAluY
CAediting_1356405chr19_41723890_+SINEAluAluY
CAediting_1356406chr19_41723894_+SINEAluAluY
CAediting_1356407chr19_41723901_+SINEAluAluY
CAediting_1356408chr19_41723906_+SINEAluAluY
CAediting_1356409chr19_41725419_+SINEAluAluJr
CAediting_1356410chr19_41725426_+SINEAluAluJr
CAediting_1356411chr19_41725440_+SINEAluAluJr
CAediting_1356412chr19_41725445_+SINEAluAluJr
CAediting_1356413chr19_41725450_+SINEAluAluJr
CAediting_1356414chr19_41725457_+SINEAluAluJr
CAediting_1356415chr19_41725464_+SINEAluAluJr
CAediting_1356416chr19_41725470_+SINEAluAluJr
CAediting_1356417chr19_41725471_+SINEAluAluJr
CAediting_1356418chr19_41725499_+SINEAluAluJr
CAediting_1356419chr19_41725509_+SINEAluAluJr
CAediting_1356420chr19_41725513_+SINEAluAluJr
CAediting_1356421chr19_41725535_+SINEAluAluJr
CAediting_1356422chr19_41725608_+SINEAluAluJr
CAediting_1356423chr19_41725611_+SINEAluAluJr
CAediting_1356424chr19_41725612_+SINEAluAluJr
CAediting_1356425chr19_41725625_+SINEAluAluJr
CAediting_1356426chr19_41725634_+SINEAluAluJr
CAediting_1356427chr19_41725647_+SINEAluAluJr
CAediting_1356428chr19_41728521_+SINEAluAluSx3
CAediting_1356429chr19_41728531_+SINEAluAluSx3
CAediting_1356430chr19_41728537_+SINEAluAluSx3
CAediting_1356431chr19_41728599_+SINEAluAluSx3
CAediting_1356432chr19_41728629_+SINEAluAluSx3
CAediting_1356433chr19_41728667_+SINEAluAluSx3
CAediting_1356434chr19_41728680_+SINEAluAluSx3
CAediting_1356435chr19_41728682_+SINEAluAluSx3
CAediting_1356436chr19_41728715_+SINEAluAluSx3
CAediting_1356437chr19_41728728_+SINEAluAluSx3
CAediting_1356438chr19_41729284_+SINEAluAluSc
CAediting_1356439chr19_41729294_+SINEAluAluSc
CAediting_1356440chr19_41729299_+SINEAluAluSc
CAediting_1356441chr19_41729308_+SINEAluAluSc
CAediting_1356442chr19_41729314_+SINEAluAluSc
CAediting_1356443chr19_41729323_+SINEAluAluSc
CAediting_1356444chr19_41729325_+SINEAluAluSc
CAediting_1356445chr19_41729329_+SINEAluAluSc
CAediting_1356446chr19_41729358_+SINEAluAluSc
CAediting_1356447chr19_41729397_+SINEAluAluSc
CAediting_1356448chr19_41729405_+SINEAluAluSc
CAediting_1356449chr19_41729406_+SINEAluAluSc
CAediting_1356450chr19_41729487_+SINEAluAluSc
CAediting_1356451chr19_41729492_+SINEAluAluSc
CAediting_1356452chr19_41729496_+SINEAluAluSc
CAediting_1356453chr19_41729497_+SINEAluAluSc

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RNA A-to-I editing events in the alternative splicing sites for CEACAM5

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000105388.13.CEACAM5.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000105388.13.CEACAM5.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CEACAM5

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CEACAM5

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for CEACAM5

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1356442chr19_41729314_+ENSG00000105388.13ENST00000398599hsa-miR-483-5p41729310417293167mer-m84172929641729317140.00-14.55
CAediting_1356442chr19_41729314_+ENSG00000105388.13ENST00000405816hsa-miR-483-5p41729310417293167mer-m84172929641729317140.00-14.55
CAediting_1356443chr19_41729323_+ENSG00000105388.13ENST00000398599hsa-miR-222-5p41729317417293248mer-1a4172930441729324141.00-9.81
CAediting_1356443chr19_41729323_+ENSG00000105388.13ENST00000398599hsa-miR-30a-3p41729319417293268mer-1a4172930241729326154.00-11.65
CAediting_1356443chr19_41729323_+ENSG00000105388.13ENST00000398599hsa-miR-30d-3p41729319417293268mer-1a4172930441729326153.00-12.10
CAediting_1356443chr19_41729323_+ENSG00000105388.13ENST00000398599hsa-miR-30e-3p41729319417293268mer-1a4172930241729326154.00-13.04
CAediting_1356443chr19_41729323_+ENSG00000105388.13ENST00000398599hsa-miR-93641729316417293238mer-1a4172930141729323159.00-22.08
CAediting_1356443chr19_41729323_+ENSG00000105388.13ENST00000405816hsa-miR-222-5p41729317417293248mer-1a4172930441729324141.00-9.81
CAediting_1356443chr19_41729323_+ENSG00000105388.13ENST00000405816hsa-miR-30a-3p41729319417293268mer-1a4172930241729326154.00-11.65
CAediting_1356443chr19_41729323_+ENSG00000105388.13ENST00000405816hsa-miR-30d-3p41729319417293268mer-1a4172930441729326153.00-12.10
CAediting_1356443chr19_41729323_+ENSG00000105388.13ENST00000405816hsa-miR-30e-3p41729319417293268mer-1a4172930241729326154.00-13.04
CAediting_1356443chr19_41729323_+ENSG00000105388.13ENST00000405816hsa-miR-93641729316417293238mer-1a4172930141729323159.00-22.08
CAediting_1356444chr19_41729325_+ENSG00000105388.13ENST00000398599hsa-miR-63041729323417293308mer-1a4172931041729330158.00-15.14
CAediting_1356444chr19_41729325_+ENSG00000105388.13ENST00000405816hsa-miR-63041729323417293308mer-1a4172931041729330158.00-15.14
CAediting_1356438chr19_41729284_+ENSG00000105388.13ENST00000398599hsa-miR-428141729281417292888mer-1a4172927141729288141.00-22.21
CAediting_1356438chr19_41729284_+ENSG00000105388.13ENST00000405816hsa-miR-428141729281417292888mer-1a4172927141729288141.00-22.21
CAediting_1356439chr19_41729294_+ENSG00000105388.13ENST00000398599hsa-miR-443541729291417292988mer-1a4172927541729298141.00-15.03
CAediting_1356439chr19_41729294_+ENSG00000105388.13ENST00000398599hsa-miR-443541729291417292988mer-1a4172927541729298141.00-15.03
CAediting_1356439chr19_41729294_+ENSG00000105388.13ENST00000405816hsa-miR-443541729291417292988mer-1a4172927541729298141.00-15.03
CAediting_1356439chr19_41729294_+ENSG00000105388.13ENST00000405816hsa-miR-443541729291417292988mer-1a4172927541729298141.00-15.03
CAediting_1356440chr19_41729299_+ENSG00000105388.13ENST00000398599hsa-miR-3064-5p41729293417292986mer4172927941729299141.00-20.34
CAediting_1356440chr19_41729299_+ENSG00000105388.13ENST00000398599hsa-miR-3085-3p41729293417292986mer4172927941729299142.00-18.16
CAediting_1356440chr19_41729299_+ENSG00000105388.13ENST00000398599hsa-miR-479441729292417292987mer-m84172927841729299140.00-13.44
CAediting_1356440chr19_41729299_+ENSG00000105388.13ENST00000398599hsa-miR-5580-5p41729293417293008mer-1a4172927941729300140.00-14.13
CAediting_1356440chr19_41729299_+ENSG00000105388.13ENST00000398599hsa-miR-664a-5p41729292417292987mer-m84172927641729299151.00-22.14
CAediting_1356440chr19_41729299_+ENSG00000105388.13ENST00000405816hsa-miR-3064-5p41729293417292986mer4172927941729299141.00-20.34
CAediting_1356440chr19_41729299_+ENSG00000105388.13ENST00000405816hsa-miR-3085-3p41729293417292986mer4172927941729299142.00-18.16
CAediting_1356440chr19_41729299_+ENSG00000105388.13ENST00000405816hsa-miR-479441729292417292987mer-m84172927841729299140.00-13.44
CAediting_1356440chr19_41729299_+ENSG00000105388.13ENST00000405816hsa-miR-5580-5p41729293417293008mer-1a4172927941729300140.00-14.13
CAediting_1356440chr19_41729299_+ENSG00000105388.13ENST00000405816hsa-miR-664a-5p41729292417292987mer-m84172927641729299151.00-22.14
CAediting_1356445chr19_41729329_+ENSG00000105388.13ENST00000398599hsa-miR-3680-3p41729326417293338mer-1a4172931141729333140.00-14.24
CAediting_1356445chr19_41729329_+ENSG00000105388.13ENST00000398599hsa-miR-3680-3p41729326417293338mer-1a4172931141729333140.00-14.24
CAediting_1356445chr19_41729329_+ENSG00000105388.13ENST00000405816hsa-miR-153-5p41729322417293287mer-m84172930741729329148.00-8.16
CAediting_1356445chr19_41729329_+ENSG00000105388.13ENST00000405816hsa-miR-3680-3p41729326417293338mer-1a4172931141729333140.00-14.24
CAediting_1356445chr19_41729329_+ENSG00000105388.13ENST00000405816hsa-miR-3680-3p41729326417293338mer-1a4172931141729333140.00-14.24

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1356441chr19_41729308_+ENSG00000105388.13ENST00000398599hsa-miR-193b-5p41729306417293138mer-1a4172929241729313145-17.29
CAediting_1356442chr19_41729314_+ENSG00000105388.13ENST00000398599hsa-miR-317041729307417293137mer-m84172929341729314146-12.57
CAediting_1356440chr19_41729299_+ENSG00000105388.13ENST00000398599hsa-miR-4781-3p41729295417293017mer-m84172928141729302140-11.98
CAediting_1356439chr19_41729294_+ENSG00000105388.13ENST00000398599hsa-miR-606941729290417292978mer-1a4172927741729297141-16.47
CAediting_1356438chr19_41729284_+ENSG00000105388.13ENST00000398599hsa-miR-6848-3p41729282417292887mer-m84172927141729289140-16.39
CAediting_1356442chr19_41729314_+ENSG00000105388.13ENST00000398599hsa-miR-6855-5p41729307417293137mer-m84172928941729314151-18.66
CAediting_1356442chr19_41729314_+ENSG00000105388.13ENST00000398599hsa-miR-6890-5p41729308417293147mer-m84172929541729315142-15.69
CAediting_1356441chr19_41729308_+ENSG00000105388.13ENST00000405816hsa-miR-193b-5p41729306417293138mer-1a4172929241729313145-17.29
CAediting_1356442chr19_41729314_+ENSG00000105388.13ENST00000405816hsa-miR-317041729307417293137mer-m84172929341729314146-12.57
CAediting_1356440chr19_41729299_+ENSG00000105388.13ENST00000405816hsa-miR-4781-3p41729295417293017mer-m84172928141729302140-11.98
CAediting_1356439chr19_41729294_+ENSG00000105388.13ENST00000405816hsa-miR-606941729290417292978mer-1a4172927741729297141-16.47
CAediting_1356438chr19_41729284_+ENSG00000105388.13ENST00000405816hsa-miR-6848-3p41729282417292887mer-m84172927141729289140-16.39
CAediting_1356442chr19_41729314_+ENSG00000105388.13ENST00000405816hsa-miR-6855-5p41729307417293137mer-m84172928941729314151-18.66
CAediting_1356442chr19_41729314_+ENSG00000105388.13ENST00000405816hsa-miR-6890-5p41729308417293147mer-m84172929541729315142-15.69

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CEACAM5

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for CEACAM5

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for CEACAM5

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
COADpathologic_stageCAediting_1356416chr19_41725470_+0.04313154272309360.204753904294847

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Relation with survival for CEACAM5

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for CEACAM5

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for CEACAM5

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
CEACAM5C0000786Spontaneous abortion1CTD_human
CEACAM5C0000822Abortion, Tubal1CTD_human
CEACAM5C3830362Early Pregnancy Loss1CTD_human
CEACAM5C4552766Miscarriage1CTD_human