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Editing gene: PPIE (CAeditome ID:10450)

Gene summary for PPIE

Gene summary

Gene information	Gene symbol	PPIE
	Gene ID	10450
	Gene name	peptidylprolyl isomerase E
	Synonyms	CYP-33\|CYP33
	Cytomap	1p34.2
	Type of gene	protein-coding
	Description	peptidyl-prolyl cis-trans isomerase EPPIase Ecyclophilin-33peptidylprolyl isomerase E (cyclophilin E)rotamase E
	Modification date	20210518
	UniProtAcc	Q9UNP9
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
PPIE	GO:0003729	Peptidyl-prolyl cis-trans isomerase E	18258190
PPIE	GO:0003755	Peptidyl-prolyl cis-trans isomerase E	18258190
PPIE	GO:0003755	Peptidyl-prolyl cis-trans isomerase E	20676357
PPIE	GO:0008143	Peptidyl-prolyl cis-trans isomerase E	18258190
PPIE	GO:0016018	Peptidyl-prolyl cis-trans isomerase E	20676357
PPIE	GO:0000398	Peptidyl-prolyl cis-trans isomerase E	28076346
PPIE	GO:0000413	Peptidyl-prolyl cis-trans isomerase E	20676357
PPIE	GO:0005634	Peptidyl-prolyl cis-trans isomerase E	11313484
PPIE	GO:0005634	Peptidyl-prolyl cis-trans isomerase E	28076346
PPIE	GO:0005829	Peptidyl-prolyl cis-trans isomerase E	0000052
PPIE	GO:0016607	Peptidyl-prolyl cis-trans isomerase E	0000052
PPIE	GO:0071007	Peptidyl-prolyl cis-trans isomerase E	28076346
PPIE	GO:0071013	Peptidyl-prolyl cis-trans isomerase E	11991638

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RNA A-to-I events for PPIE

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000084072.15

RNA A-to-I editing events in Cancer.

CAediting_50000(39739086, +), CAediting_50001(39739120, +), CAediting_50002(39739128, +), CAediting_50003(39739137, +), CAediting_50004(39739140, +), CAediting_50005(39739143, +), CAediting_50006(39739196, +), CAediting_50007(39739197, +), CAediting_50008(39739198, +), CAediting_50009(39739215, +), CAediting_50010(39739216, +), CAediting_50011(39739292, +), CAediting_50012(39739667, +), CAediting_50013(39739724, +), CAediting_50014(39739735, +), CAediting_50015(39739751, +), CAediting_50016(39739764, +), CAediting_50017(39739769, +), CAediting_50018(39739771, +), CAediting_50019(39739796, +), CAediting_50020(39739811, +), CAediting_50021(39747486, +), CAediting_50022(39747529, +), CAediting_50023(39747537, +), CAediting_50024(39747543, +), CAediting_50025(39747556, +), CAediting_50026(39747562, +), CAediting_50027(39747563, +), CAediting_50028(39747567, +), CAediting_50029(39747592, +), CAediting_50030(39747604, +), CAediting_50031(39747624, +), CAediting_50032(39747628, +), CAediting_50033(39747629, +), CAediting_50034(39747638, +), CAediting_50035(39747647, +), CAediting_50036(39747664, +), CAediting_50037(39747677, +), CAediting_50038(39747688, +), CAediting_50039(39747740, +), CAediting_50040(39747956, +), CAediting_50041(39747988, +), CAediting_50042(39748033, +), CAediting_50043(39748450, +), CAediting_50044(39748474, +), CAediting_50045(39748482, +), CAediting_50046(39748483, +), CAediting_50047(39748488, +), CAediting_50048(39748491, +), CAediting_50049(39748499, +), CAediting_50050(39748515, +), CAediting_50051(39748523, +), CAediting_50052(39748527, +), CAediting_50053(39748536, +), CAediting_50054(39748551, +), CAediting_50055(39748553, +), CAediting_50056(39748555, +), CAediting_50057(39748559, +), CAediting_50058(39748560, +), CAediting_50059(39748561, +), CAediting_50060(39748566, +), CAediting_50061(39748577, +), CAediting_50062(39748581, +), CAediting_50063(39748589, +), CAediting_50064(39748593, +), CAediting_50065(39748604, +), CAediting_50066(39748614, +), CAediting_50067(39748620, +), CAediting_50068(39748624, +), CAediting_50069(39748628, +), CAediting_50070(39748637, +), CAediting_50071(39748641, +), CAediting_50072(39748650, +), CAediting_50073(39748655, +), CAediting_50074(39748656, +), CAediting_50075(39748660, +), CAediting_50076(39748661, +), CAediting_50077(39748663, +), CAediting_50078(39748670, +), CAediting_50079(39748680, +), CAediting_50080(39748681, +), CAediting_50081(39748685, +), CAediting_50082(39748687, +), CAediting_50083(39748700, +), CAediting_50084(39748715, +), CAediting_50085(39748720, +), CAediting_50086(39748725, +), CAediting_50087(39748726, +), CAediting_50088(39748754, +), CAediting_50089(39751424, +), CAediting_50090(39751497, +), CAediting_50091(39751503, +), CAediting_50092(39751562, +), CAediting_50093(39751574, +), CAediting_50094(39751637, +), CAediting_50095(39751836, +), CAediting_50096(39751838, +), CAediting_50097(39751974, +), CAediting_50098(39752041, +), CAediting_50099(39754605, +), CAediting_50100(39754606, +), CAediting_50101(39754647, +), CAediting_50102(39754702, +), CAediting_50103(39754724, +), CAediting_50104(39754731, +), CAediting_50105(39754737, +), CAediting_50106(39754841, +),

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RNA editing positional annotations for PPIE using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_50000	chr1_39739086_+	ncRNA_exonic
CAediting_50001	chr1_39739120_+	ncRNA_exonic
CAediting_50002	chr1_39739128_+	ncRNA_exonic
CAediting_50003	chr1_39739137_+	ncRNA_exonic
CAediting_50004	chr1_39739140_+	ncRNA_exonic
CAediting_50005	chr1_39739143_+	ncRNA_exonic
CAediting_50006	chr1_39739196_+	ncRNA_exonic
CAediting_50007	chr1_39739197_+	ncRNA_exonic
CAediting_50008	chr1_39739198_+	ncRNA_exonic
CAediting_50009	chr1_39739215_+	ncRNA_exonic
CAediting_50010	chr1_39739216_+	ncRNA_exonic
CAediting_50011	chr1_39739292_+	ncRNA_exonic
CAediting_50012	chr1_39739667_+	ncRNA_intronic
CAediting_50013	chr1_39739724_+	ncRNA_intronic
CAediting_50014	chr1_39739735_+	ncRNA_intronic
CAediting_50015	chr1_39739751_+	ncRNA_intronic
CAediting_50016	chr1_39739764_+	ncRNA_intronic
CAediting_50017	chr1_39739769_+	ncRNA_intronic
CAediting_50018	chr1_39739771_+	ncRNA_intronic
CAediting_50019	chr1_39739796_+	ncRNA_intronic
CAediting_50020	chr1_39739811_+	ncRNA_intronic
CAediting_50021	chr1_39747486_+	ncRNA_intronic
CAediting_50022	chr1_39747529_+	ncRNA_intronic
CAediting_50023	chr1_39747537_+	ncRNA_intronic
CAediting_50024	chr1_39747543_+	ncRNA_intronic
CAediting_50025	chr1_39747556_+	ncRNA_intronic
CAediting_50026	chr1_39747562_+	ncRNA_intronic
CAediting_50027	chr1_39747563_+	ncRNA_intronic
CAediting_50028	chr1_39747567_+	ncRNA_intronic
CAediting_50029	chr1_39747592_+	ncRNA_intronic
CAediting_50030	chr1_39747604_+	ncRNA_intronic
CAediting_50031	chr1_39747624_+	ncRNA_intronic
CAediting_50032	chr1_39747628_+	ncRNA_intronic
CAediting_50033	chr1_39747629_+	ncRNA_intronic
CAediting_50034	chr1_39747638_+	ncRNA_intronic
CAediting_50035	chr1_39747647_+	ncRNA_intronic
CAediting_50036	chr1_39747664_+	ncRNA_intronic
CAediting_50037	chr1_39747677_+	ncRNA_intronic
CAediting_50038	chr1_39747688_+	ncRNA_intronic
CAediting_50039	chr1_39747740_+	ncRNA_intronic
CAediting_50040	chr1_39747956_+	ncRNA_intronic
CAediting_50041	chr1_39747988_+	ncRNA_intronic
CAediting_50042	chr1_39748033_+	ncRNA_intronic
CAediting_50043	chr1_39748450_+	ncRNA_intronic
CAediting_50044	chr1_39748474_+	ncRNA_intronic
CAediting_50045	chr1_39748482_+	ncRNA_intronic
CAediting_50046	chr1_39748483_+	ncRNA_intronic
CAediting_50047	chr1_39748488_+	ncRNA_intronic
CAediting_50048	chr1_39748491_+	ncRNA_intronic
CAediting_50049	chr1_39748499_+	ncRNA_intronic
CAediting_50050	chr1_39748515_+	ncRNA_intronic
CAediting_50051	chr1_39748523_+	ncRNA_intronic
CAediting_50052	chr1_39748527_+	ncRNA_intronic
CAediting_50053	chr1_39748536_+	ncRNA_intronic
CAediting_50054	chr1_39748551_+	ncRNA_intronic
CAediting_50055	chr1_39748553_+	ncRNA_intronic
CAediting_50056	chr1_39748555_+	ncRNA_intronic
CAediting_50057	chr1_39748559_+	ncRNA_intronic
CAediting_50058	chr1_39748560_+	ncRNA_intronic
CAediting_50059	chr1_39748561_+	ncRNA_intronic
CAediting_50060	chr1_39748566_+	ncRNA_intronic
CAediting_50061	chr1_39748577_+	ncRNA_intronic
CAediting_50062	chr1_39748581_+	ncRNA_intronic
CAediting_50063	chr1_39748589_+	ncRNA_intronic
CAediting_50064	chr1_39748593_+	ncRNA_intronic
CAediting_50065	chr1_39748604_+	ncRNA_intronic
CAediting_50066	chr1_39748614_+	ncRNA_intronic
CAediting_50067	chr1_39748620_+	ncRNA_intronic
CAediting_50068	chr1_39748624_+	ncRNA_intronic
CAediting_50069	chr1_39748628_+	ncRNA_intronic
CAediting_50070	chr1_39748637_+	ncRNA_intronic
CAediting_50071	chr1_39748641_+	ncRNA_intronic
CAediting_50072	chr1_39748650_+	ncRNA_intronic
CAediting_50073	chr1_39748655_+	ncRNA_intronic
CAediting_50074	chr1_39748656_+	ncRNA_intronic
CAediting_50075	chr1_39748660_+	ncRNA_intronic
CAediting_50076	chr1_39748661_+	ncRNA_intronic
CAediting_50077	chr1_39748663_+	ncRNA_intronic
CAediting_50078	chr1_39748670_+	ncRNA_intronic
CAediting_50079	chr1_39748680_+	ncRNA_intronic
CAediting_50080	chr1_39748681_+	ncRNA_intronic
CAediting_50081	chr1_39748685_+	ncRNA_intronic
CAediting_50082	chr1_39748687_+	ncRNA_intronic
CAediting_50083	chr1_39748700_+	ncRNA_intronic
CAediting_50084	chr1_39748715_+	ncRNA_intronic
CAediting_50085	chr1_39748720_+	ncRNA_intronic
CAediting_50086	chr1_39748725_+	ncRNA_intronic
CAediting_50087	chr1_39748726_+	ncRNA_intronic
CAediting_50088	chr1_39748754_+	ncRNA_intronic
CAediting_50089	chr1_39751424_+	ncRNA_intronic
CAediting_50090	chr1_39751497_+	ncRNA_intronic
CAediting_50091	chr1_39751503_+	ncRNA_intronic
CAediting_50092	chr1_39751562_+	ncRNA_intronic
CAediting_50093	chr1_39751574_+	ncRNA_intronic
CAediting_50094	chr1_39751637_+	ncRNA_intronic
CAediting_50095	chr1_39751836_+	ncRNA_intronic
CAediting_50096	chr1_39751838_+	ncRNA_intronic
CAediting_50097	chr1_39751974_+	ncRNA_intronic
CAediting_50098	chr1_39752041_+	ncRNA_intronic
CAediting_50099	chr1_39754605_+	intronic
CAediting_50100	chr1_39754606_+	intronic
CAediting_50101	chr1_39754647_+	intronic
CAediting_50102	chr1_39754702_+	intronic
CAediting_50103	chr1_39754724_+	intronic
CAediting_50104	chr1_39754731_+	intronic
CAediting_50105	chr1_39754737_+	intronic
CAediting_50106	chr1_39754841_+	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_50019	chr1_39739796_+	LINE	L2	L2
CAediting_50020	chr1_39739811_+	LINE	L2	L2
CAediting_50021	chr1_39747486_+	SINE	Alu	AluSx3
CAediting_50022	chr1_39747529_+	SINE	Alu	AluSx3
CAediting_50023	chr1_39747537_+	SINE	Alu	AluSx3
CAediting_50024	chr1_39747543_+	SINE	Alu	AluSx3
CAediting_50025	chr1_39747556_+	SINE	Alu	AluSx3
CAediting_50026	chr1_39747562_+	SINE	Alu	AluSx3
CAediting_50027	chr1_39747563_+	SINE	Alu	AluSx3
CAediting_50028	chr1_39747567_+	SINE	Alu	AluSx3
CAediting_50029	chr1_39747592_+	SINE	Alu	AluSx3
CAediting_50030	chr1_39747604_+	SINE	Alu	AluSx3
CAediting_50031	chr1_39747624_+	SINE	Alu	AluSx3
CAediting_50032	chr1_39747628_+	SINE	Alu	AluSx3
CAediting_50033	chr1_39747629_+	SINE	Alu	AluSx3
CAediting_50034	chr1_39747638_+	SINE	Alu	AluSx3
CAediting_50035	chr1_39747647_+	SINE	Alu	AluSx3
CAediting_50036	chr1_39747664_+	SINE	Alu	AluSx3
CAediting_50037	chr1_39747677_+	SINE	Alu	AluSx3
CAediting_50038	chr1_39747688_+	SINE	Alu	AluSx3
CAediting_50039	chr1_39747740_+	SINE	Alu	AluSx3
CAediting_50040	chr1_39747956_+	SINE	Alu	FRAM
CAediting_50041	chr1_39747988_+	SINE	Alu	FRAM
CAediting_50042	chr1_39748033_+	SINE	Alu	FRAM
CAediting_50044	chr1_39748474_+	SINE	Alu	AluSq2
CAediting_50045	chr1_39748482_+	SINE	Alu	AluSq2
CAediting_50046	chr1_39748483_+	SINE	Alu	AluSq2
CAediting_50047	chr1_39748488_+	SINE	Alu	AluSq2
CAediting_50048	chr1_39748491_+	SINE	Alu	AluSq2
CAediting_50049	chr1_39748499_+	SINE	Alu	AluSq2
CAediting_50050	chr1_39748515_+	SINE	Alu	AluSq2
CAediting_50051	chr1_39748523_+	SINE	Alu	AluSq2
CAediting_50052	chr1_39748527_+	SINE	Alu	AluSq2
CAediting_50053	chr1_39748536_+	SINE	Alu	AluSq2
CAediting_50054	chr1_39748551_+	SINE	Alu	AluSq2
CAediting_50055	chr1_39748553_+	SINE	Alu	AluSq2
CAediting_50056	chr1_39748555_+	SINE	Alu	AluSq2
CAediting_50057	chr1_39748559_+	SINE	Alu	AluSq2
CAediting_50058	chr1_39748560_+	SINE	Alu	AluSq2
CAediting_50059	chr1_39748561_+	SINE	Alu	AluSq2
CAediting_50060	chr1_39748566_+	SINE	Alu	AluSq2
CAediting_50061	chr1_39748577_+	SINE	Alu	AluSq2
CAediting_50062	chr1_39748581_+	SINE	Alu	AluSq2
CAediting_50063	chr1_39748589_+	SINE	Alu	AluSq2
CAediting_50064	chr1_39748593_+	SINE	Alu	AluSq2
CAediting_50065	chr1_39748604_+	SINE	Alu	AluSq2
CAediting_50066	chr1_39748614_+	SINE	Alu	AluSq2
CAediting_50067	chr1_39748620_+	SINE	Alu	AluSq2
CAediting_50068	chr1_39748624_+	SINE	Alu	AluSq2
CAediting_50069	chr1_39748628_+	SINE	Alu	AluSq2
CAediting_50070	chr1_39748637_+	SINE	Alu	AluSq2
CAediting_50071	chr1_39748641_+	SINE	Alu	AluSq2
CAediting_50072	chr1_39748650_+	SINE	Alu	AluSq2
CAediting_50073	chr1_39748655_+	SINE	Alu	AluSq2
CAediting_50074	chr1_39748656_+	SINE	Alu	AluSq2
CAediting_50075	chr1_39748660_+	SINE	Alu	AluSq2
CAediting_50076	chr1_39748661_+	SINE	Alu	AluSq2
CAediting_50077	chr1_39748663_+	SINE	Alu	AluSq2
CAediting_50078	chr1_39748670_+	SINE	Alu	AluSq2
CAediting_50079	chr1_39748680_+	SINE	Alu	AluSq2
CAediting_50080	chr1_39748681_+	SINE	Alu	AluSq2
CAediting_50081	chr1_39748685_+	SINE	Alu	AluSq2
CAediting_50082	chr1_39748687_+	SINE	Alu	AluSq2
CAediting_50083	chr1_39748700_+	SINE	Alu	AluSq2
CAediting_50084	chr1_39748715_+	SINE	Alu	AluSq2
CAediting_50085	chr1_39748720_+	SINE	Alu	AluSq2
CAediting_50086	chr1_39748725_+	SINE	Alu	AluSq2
CAediting_50087	chr1_39748726_+	SINE	Alu	AluSq2
CAediting_50089	chr1_39751424_+	SINE	Alu	AluJb
CAediting_50090	chr1_39751497_+	SINE	Alu	AluJb
CAediting_50091	chr1_39751503_+	SINE	Alu	AluJb
CAediting_50092	chr1_39751562_+	SINE	Alu	AluJb
CAediting_50093	chr1_39751574_+	SINE	Alu	AluJb
CAediting_50094	chr1_39751637_+	SINE	Alu	AluJb
CAediting_50095	chr1_39751836_+	SINE	Alu	AluJb
CAediting_50096	chr1_39751838_+	SINE	Alu	AluJb
CAediting_50097	chr1_39751974_+	SINE	Alu	AluJb
CAediting_50098	chr1_39752041_+	SINE	Alu	AluJb
CAediting_50099	chr1_39754605_+	SINE	Alu	AluJb
CAediting_50100	chr1_39754606_+	SINE	Alu	AluJb
CAediting_50101	chr1_39754647_+	SINE	Alu	AluJb
CAediting_50102	chr1_39754702_+	SINE	Alu	AluJb
CAediting_50103	chr1_39754724_+	SINE	Alu	AluJb
CAediting_50104	chr1_39754731_+	SINE	Alu	AluJb
CAediting_50105	chr1_39754737_+	SINE	Alu	AluJb
CAediting_50106	chr1_39754841_+	SINE	Alu	AluJb

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RNA A-to-I editing events in the alternative splicing sites for PPIE

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_50021	chr1_39747486_+	39747467:39747489	3SS	0+1i	TTTTTTTTTTTTTTGAGACAGAG	-13.21	TTTTTTTTTTTTTTGAGACGGAG	-4.46
IR	CAediting_50021	chr1_39747486_+	39747467:39747489	3SS	0+1i	TTTTTTTTTTTTTTGAGACAGAG	-13.21	TTTTTTTTTTTTTTGAGACGGAG	-4.46
ES	CAediting_50061	chr1_39748577_+	39748574:39748596	3SS	0+17i	TAAAAATACAAAATTAGCCAGGT	-17.21	TAAGAATACAAAATTAGCCAGGT	-19.23
IR	CAediting_50061	chr1_39748577_+	39748574:39748596	3SS	0+17i	TAAAAATACAAAATTAGCCAGGT	-17.21	TAAGAATACAAAATTAGCCAGGT	-19.23
ES	CAediting_50062	chr1_39748581_+	39748574:39748596	3SS	0+13i	TAAAAATACAAAATTAGCCAGGT	-17.21	TAAAAATGCAAAATTAGCCAGGT	-16.98
IR	CAediting_50062	chr1_39748581_+	39748574:39748596	3SS	0+13i	TAAAAATACAAAATTAGCCAGGT	-17.21	TAAAAATGCAAAATTAGCCAGGT	-16.98
ES	CAediting_50063	chr1_39748589_+	39748574:39748596	3SS	0+5i	TAAAAATACAAAATTAGCCAGGT	-17.21	TAAAAATACAAAATTGGCCAGGT	-16.12
IR	CAediting_50063	chr1_39748589_+	39748574:39748596	3SS	0+5i	TAAAAATACAAAATTAGCCAGGT	-17.21	TAAAAATACAAAATTGGCCAGGT	-16.12
ES	CAediting_50064	chr1_39748593_+	39748574:39748596	3SS	0+1i	TAAAAATACAAAATTAGCCAGGT	-17.21	TAAAAATACAAAATTAGCCGGGT	-8.46
IR	CAediting_50064	chr1_39748593_+	39748574:39748596	3SS	0+1i	TAAAAATACAAAATTAGCCAGGT	-17.21	TAAAAATACAAAATTAGCCGGGT	-8.46
ES	CAediting_50082	chr1_39748687_+	39748686:39748708	3SS	0+19i	GATTGTGCCATTGCACTGCAGCA	-25.55	GGTTGTGCCATTGCACTGCAGCA	-26.12
IR	CAediting_50082	chr1_39748687_+	39748686:39748708	3SS	0+19i	GATTGTGCCATTGCACTGCAGCA	-25.55	GGTTGTGCCATTGCACTGCAGCA	-26.12
MEX_2	CAediting_50082	chr1_39748687_+	39748686:39748708	3SS	0+19i	GATTGTGCCATTGCACTGCAGCA	-25.55	GGTTGTGCCATTGCACTGCAGCA	-26.12
ES	CAediting_50083	chr1_39748700_+	39748686:39748708	3SS	0+6i	GATTGTGCCATTGCACTGCAGCA	-25.55	GATTGTGCCATTGCGCTGCAGCA	-22
IR	CAediting_50083	chr1_39748700_+	39748686:39748708	3SS	0+6i	GATTGTGCCATTGCACTGCAGCA	-25.55	GATTGTGCCATTGCGCTGCAGCA	-22
MEX_2	CAediting_50083	chr1_39748700_+	39748686:39748708	3SS	0+6i	GATTGTGCCATTGCACTGCAGCA	-25.55	GATTGTGCCATTGCGCTGCAGCA	-22

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000084072.15.PPIE.

Correlation between RNA A-to-I editing and PSI for ENSG00000084072.15.PPIE.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PPIE

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for PPIE

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for PPIE

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_50027	chr1_39747563_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3622a-3p	39747559	39747566	8mer-1a	39747544	39747566	149.00	-18.21
CAediting_50027	chr1_39747563_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3622b-3p	39747559	39747566	8mer-1a	39747546	39747566	147.00	-18.77
CAediting_50027	chr1_39747563_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4539	39747557	39747562	6mer	39747544	39747563	141.00	-21.18
CAediting_50028	chr1_39747567_+	ENSG00000084072.15	ENST00000495526	hsa-miR-1255b-2-3p	39747561	39747567	7mer-m8	39747547	39747568	140.00	-12.20
CAediting_50028	chr1_39747567_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4511	39747566	39747571	6mer	39747550	39747572	145.00	-12.26
CAediting_50028	chr1_39747567_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548b-3p	39747565	39747571	7mer-m8	39747553	39747572	145.00	-16.71
CAediting_50029	chr1_39747592_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4691-3p	39747589	39747595	7mer-m8	39747570	39747596	153.00	-28.71
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3064-5p	39747622	39747628	7mer-m8	39747609	39747629	156.00	-25.73
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3085-3p	39747622	39747628	7mer-m8	39747608	39747629	149.00	-20.07
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548a-3p	39747626	39747632	7mer-m8	39747612	39747633	150.00	-12.26
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548a-3p	39747626	39747632	7mer-m8	39747612	39747633	150.00	-12.26
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548a-3p	39747626	39747632	7mer-m8	39747612	39747633	150.00	-12.26
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548ae-3p	39747627	39747633	7mer-m8	39747614	39747634	145.00	-6.55
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548ae-3p	39747627	39747633	7mer-m8	39747614	39747634	145.00	-6.55
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548ah-3p	39747627	39747633	7mer-m8	39747613	39747634	145.00	-6.55
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548aj-3p	39747627	39747633	7mer-m8	39747614	39747634	145.00	-7.45
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548aj-3p	39747627	39747633	7mer-m8	39747614	39747634	145.00	-7.45
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548am-3p	39747627	39747633	7mer-m8	39747613	39747634	145.00	-6.55
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548aq-3p	39747627	39747633	7mer-m8	39747613	39747634	145.00	-6.55
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548ar-3p	39747626	39747632	7mer-m8	39747613	39747633	140.00	-6.42
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548az-3p	39747626	39747632	7mer-m8	39747613	39747633	140.00	-7.15
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548bc	39747626	39747632	7mer-m8	39747613	39747633	140.00	-7.90
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548e-3p	39747626	39747632	7mer-m8	39747612	39747633	140.00	-7.93
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548f-3p	39747626	39747632	7mer-m8	39747615	39747633	140.00	-6.88
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548f-3p	39747626	39747632	7mer-m8	39747615	39747633	140.00	-6.88
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548f-3p	39747626	39747632	7mer-m8	39747615	39747633	140.00	-6.88
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548f-3p	39747626	39747632	7mer-m8	39747615	39747633	140.00	-6.88
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548f-3p	39747626	39747632	7mer-m8	39747615	39747633	140.00	-6.88
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548j-3p	39747627	39747633	7mer-m8	39747614	39747634	145.00	-6.55
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548x-3p	39747627	39747633	7mer-m8	39747615	39747634	145.00	-7.45
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548x-3p	39747627	39747633	7mer-m8	39747615	39747634	145.00	-7.45
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6504-5p	39747622	39747628	7mer-m8	39747608	39747629	148.00	-22.01
CAediting_50033	chr1_39747629_+	ENSG00000084072.15	ENST00000495526	hsa-miR-892b	39747623	39747629	7mer-m8	39747609	39747630	140.00	-16.55
CAediting_50036	chr1_39747664_+	ENSG00000084072.15	ENST00000495526	hsa-miR-433-5p	39747658	39747664	7mer-m8	39747642	39747665	162.00	-26.00
CAediting_50040	chr1_39747956_+	ENSG00000084072.15	ENST00000495526	hsa-miR-340-3p	39747950	39747956	7mer-m8	39747938	39747957	142.00	-15.89
CAediting_50040	chr1_39747956_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6827-3p	39747950	39747956	7mer-m8	39747937	39747957	150.00	-16.81
CAediting_50044	chr1_39748474_+	ENSG00000084072.15	ENST00000495526	hsa-miR-19a-3p	39748470	39748476	7mer-m8	39748457	39748477	153.00	-17.43
CAediting_50044	chr1_39748474_+	ENSG00000084072.15	ENST00000495526	hsa-miR-19b-3p	39748470	39748476	7mer-m8	39748457	39748477	157.00	-19.13
CAediting_50044	chr1_39748474_+	ENSG00000084072.15	ENST00000495526	hsa-miR-19b-3p	39748470	39748476	7mer-m8	39748457	39748477	157.00	-19.13
CAediting_50045	chr1_39748482_+	ENSG00000084072.15	ENST00000495526	hsa-miR-513a-5p	39748476	39748482	7mer-m8	39748466	39748483	140.00	-15.43
CAediting_50045	chr1_39748482_+	ENSG00000084072.15	ENST00000495526	hsa-miR-513a-5p	39748476	39748482	7mer-m8	39748466	39748483	140.00	-15.43
CAediting_50045	chr1_39748482_+	ENSG00000084072.15	ENST00000495526	hsa-miR-638	39748481	39748487	7mer-1a	39748463	39748487	143.00	-28.65
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-518a-3p	39748488	39748494	7mer-m8	39748474	39748495	145.00	-17.16
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-518a-3p	39748488	39748494	7mer-m8	39748474	39748495	145.00	-17.16
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-518b	39748488	39748494	7mer-m8	39748475	39748495	146.00	-21.80
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-518c-3p	39748488	39748494	7mer-m8	39748473	39748495	146.00	-21.31
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-518d-3p	39748488	39748494	7mer-m8	39748475	39748495	145.00	-17.84
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-518e-3p	39748487	39748493	7mer-m8	39748473	39748494	144.00	-19.12
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-518f-3p	39748488	39748494	7mer-m8	39748475	39748495	145.00	-17.49
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-526a-3p	39748488	39748494	7mer-m8	39748475	39748495	146.00	-17.72
CAediting_50052	chr1_39748527_+	ENSG00000084072.15	ENST00000495526	hsa-miR-1260a	39748523	39748529	7mer-m8	39748513	39748530	152.00	-19.24
CAediting_50052	chr1_39748527_+	ENSG00000084072.15	ENST00000495526	hsa-miR-1260b	39748523	39748529	7mer-m8	39748512	39748530	144.00	-13.95
CAediting_50052	chr1_39748527_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3156-3p	39748524	39748529	6mer	39748511	39748530	145.00	-25.21
CAediting_50052	chr1_39748527_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3156-3p	39748524	39748529	6mer	39748511	39748530	145.00	-25.21
CAediting_50052	chr1_39748527_+	ENSG00000084072.15	ENST00000495526	hsa-miR-532-3p	39748524	39748530	7mer-m8	39748510	39748531	144.00	-19.20
CAediting_50053	chr1_39748536_+	ENSG00000084072.15	ENST00000495526	hsa-miR-198	39748532	39748538	7mer-m8	39748518	39748539	141.00	-17.78
CAediting_50055	chr1_39748553_+	ENSG00000084072.15	ENST00000495526	hsa-miR-1306-3p	39748546	39748552	7mer-m8	39748536	39748553	152.00	-23.18
CAediting_50056	chr1_39748555_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4716-5p	39748549	39748555	7mer-m8	39748535	39748556	140.00	-11.30
CAediting_50059	chr1_39748561_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6837-3p	39748554	39748560	7mer-m8	39748539	39748561	151.00	-19.25
CAediting_50062	chr1_39748581_+	ENSG00000084072.15	ENST00000495526	hsa-miR-153-5p	39748574	39748580	7mer-m8	39748559	39748581	148.00	-8.16
CAediting_50062	chr1_39748581_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3680-3p	39748578	39748585	8mer-1a	39748563	39748585	140.00	-14.24
CAediting_50062	chr1_39748581_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3680-3p	39748578	39748585	8mer-1a	39748563	39748585	140.00	-14.24
CAediting_50063	chr1_39748589_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3190-5p	39748587	39748593	7mer-m8	39748575	39748594	147.00	-16.24
CAediting_50063	chr1_39748589_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548s	39748586	39748592	7mer-m8	39748571	39748593	152.00	-11.45
CAediting_50066	chr1_39748614_+	ENSG00000084072.15	ENST00000495526	hsa-miR-140-3p	39748609	39748615	7mer-m8	39748596	39748616	158.00	-19.24
CAediting_50068	chr1_39748624_+	ENSG00000084072.15	ENST00000495526	hsa-miR-1207-3p	39748617	39748623	7mer-m8	39748606	39748624	145.00	-13.53
CAediting_50068	chr1_39748624_+	ENSG00000084072.15	ENST00000495526	hsa-miR-646	39748619	39748625	7mer-m8	39748607	39748626	148.00	-21.05
CAediting_50069	chr1_39748628_+	ENSG00000084072.15	ENST00000495526	hsa-miR-516a-5p	39748624	39748630	7mer-m8	39748609	39748631	142.00	-18.01
CAediting_50069	chr1_39748628_+	ENSG00000084072.15	ENST00000495526	hsa-miR-516a-5p	39748624	39748630	7mer-m8	39748609	39748631	142.00	-18.01
CAediting_50073	chr1_39748655_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3691-3p	39748648	39748655	8mer-1a	39748633	39748655	155.00	-20.25
CAediting_50074	chr1_39748656_+	ENSG00000084072.15	ENST00000495526	hsa-miR-10400-3p	39748653	39748660	8mer-1a	39748639	39748660	140.00	-16.78
CAediting_50074	chr1_39748656_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4437	39748652	39748659	8mer-1a	39748639	39748659	149.00	-19.60
CAediting_50074	chr1_39748656_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4674	39748653	39748660	8mer-1a	39748640	39748660	150.00	-18.88
CAediting_50075	chr1_39748660_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3615	39748657	39748663	7mer-m8	39748644	39748664	144.00	-16.53
CAediting_50076	chr1_39748661_+	ENSG00000084072.15	ENST00000495526	hsa-miR-1343-3p	39748656	39748662	7mer-m8	39748640	39748663	147.00	-24.05
CAediting_50076	chr1_39748661_+	ENSG00000084072.15	ENST00000495526	hsa-miR-660-3p	39748658	39748664	7mer-m8	39748645	39748665	156.00	-18.54
CAediting_50076	chr1_39748661_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6742-3p	39748655	39748662	8mer-1a	39748638	39748662	148.00	-24.40
CAediting_50076	chr1_39748661_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6783-3p	39748656	39748662	7mer-m8	39748636	39748663	150.00	-28.05
CAediting_50087	chr1_39748726_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6837-3p	39748719	39748725	7mer-m8	39748700	39748726	159.00	-26.66
CAediting_50021	chr1_39747486_+	ENSG00000084072.15	ENST00000495526	hsa-miR-340-3p	39747480	39747487	8mer-1a	39747466	39747487	146.00	-18.22
CAediting_50021	chr1_39747486_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6827-3p	39747480	39747487	8mer-1a	39747467	39747487	140.00	-14.67
CAediting_50024	chr1_39747543_+	ENSG00000084072.15	ENST00000495526	hsa-miR-17-3p	39747536	39747542	7mer-m8	39747523	39747543	155.00	-18.01
CAediting_50024	chr1_39747543_+	ENSG00000084072.15	ENST00000495526	hsa-miR-485-5p	39747540	39747546	7mer-m8	39747526	39747547	157.00	-17.86
CAediting_50024	chr1_39747543_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6884-5p	39747540	39747546	7mer-m8	39747524	39747547	154.00	-20.16
CAediting_50025	chr1_39747556_+	ENSG00000084072.15	ENST00000495526	hsa-miR-1247-3p	39747551	39747557	7mer-m8	39747536	39747558	152.00	-25.25
CAediting_50025	chr1_39747556_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6746-5p	39747550	39747555	6mer	39747535	39747556	142.00	-31.28
CAediting_50037	chr1_39747677_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3940-3p	39747674	39747680	7mer-m8	39747663	39747681	156.00	-29.17
CAediting_50042	chr1_39748033_+	ENSG00000084072.15	ENST00000495526	hsa-miR-181d-3p	39748030	39748036	7mer-1a	39748016	39748036	142.00	-20.89
CAediting_50047	chr1_39748488_+	ENSG00000084072.15	ENST00000495526	hsa-miR-371a-3p	39748486	39748492	7mer-m8	39748471	39748493	145.00	-17.04
CAediting_50050	chr1_39748515_+	ENSG00000084072.15	ENST00000495526	hsa-miR-7108-3p	39748508	39748514	7mer-m8	39748496	39748515	152.00	-28.53
CAediting_50054	chr1_39748551_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3190-5p	39748544	39748550	7mer-m8	39748532	39748551	149.00	-19.64
CAediting_50057	chr1_39748559_+	ENSG00000084072.15	ENST00000495526	hsa-miR-23a-5p	39748557	39748563	7mer-m8	39748542	39748564	144.00	-21.43
CAediting_50057	chr1_39748559_+	ENSG00000084072.15	ENST00000495526	hsa-miR-23b-5p	39748557	39748563	7mer-m8	39748544	39748564	148.00	-16.46
CAediting_50060	chr1_39748566_+	ENSG00000084072.15	ENST00000495526	hsa-miR-483-5p	39748562	39748568	7mer-m8	39748548	39748569	140.00	-14.01
CAediting_50064	chr1_39748593_+	ENSG00000084072.15	ENST00000495526	hsa-miR-941	39748589	39748595	7mer-m8	39748572	39748596	148.00	-23.98
CAediting_50064	chr1_39748593_+	ENSG00000084072.15	ENST00000495526	hsa-miR-941	39748589	39748595	7mer-m8	39748572	39748596	148.00	-23.98
CAediting_50064	chr1_39748593_+	ENSG00000084072.15	ENST00000495526	hsa-miR-941	39748589	39748595	7mer-m8	39748572	39748596	148.00	-23.98
CAediting_50064	chr1_39748593_+	ENSG00000084072.15	ENST00000495526	hsa-miR-941	39748589	39748595	7mer-m8	39748572	39748596	148.00	-23.98
CAediting_50064	chr1_39748593_+	ENSG00000084072.15	ENST00000495526	hsa-miR-941	39748589	39748595	7mer-m8	39748572	39748596	148.00	-23.98
CAediting_50065	chr1_39748604_+	ENSG00000084072.15	ENST00000495526	hsa-miR-501-3p	39748600	39748606	7mer-m8	39748586	39748607	140.00	-14.58
CAediting_50070	chr1_39748637_+	ENSG00000084072.15	ENST00000495526	hsa-miR-1913	39748635	39748641	7mer-m8	39748621	39748642	151.00	-23.04
CAediting_50070	chr1_39748637_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6849-3p	39748630	39748636	7mer-m8	39748616	39748637	142.00	-14.48
CAediting_50079	chr1_39748680_+	ENSG00000084072.15	ENST00000495526	hsa-miR-324-3p	39748673	39748680	8mer-1a	39748658	39748680	145.00	-17.21
CAediting_50079	chr1_39748680_+	ENSG00000084072.15	ENST00000495526	hsa-miR-455-3p	39748677	39748684	8mer-1a	39748662	39748684	149.00	-21.45
CAediting_50079	chr1_39748680_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6509-3p	39748674	39748680	7mer-m8	39748660	39748681	164.00	-21.03
CAediting_50080	chr1_39748681_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6787-3p	39748679	39748686	8mer-1a	39748664	39748686	159.00	-26.40
CAediting_50085	chr1_39748720_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6780b-3p	39748714	39748720	7mer-m8	39748701	39748721	149.00	-15.58
CAediting_50022	chr1_39747529_+	ENSG00000084072.15	ENST00000495526	hsa-miR-499a-3p	39747523	39747529	7mer-m8	39747512	39747530	151.00	-22.88
CAediting_50022	chr1_39747529_+	ENSG00000084072.15	ENST00000495526	hsa-miR-499b-3p	39747523	39747529	7mer-m8	39747510	39747530	147.00	-14.49
CAediting_50043	chr1_39748450_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3619-3p	39748447	39748453	7mer-m8	39748433	39748454	148.00	-17.40
CAediting_50061	chr1_39748577_+	ENSG00000084072.15	ENST00000495526	hsa-miR-630	39748575	39748582	8mer-1a	39748562	39748582	158.00	-15.14
CAediting_50077	chr1_39748663_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3189-3p	39748656	39748662	7mer-m8	39748643	39748663	149.00	-19.95
CAediting_50086	chr1_39748725_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4294	39748723	39748729	7mer-m8	39748713	39748730	141.00	-13.39

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_50045	chr1_39748482_+	ENSG00000084072.15	ENST00000495526	hsa-miR-10399-5p	39748477	39748483	7mer-m8	39748463	39748484	144	-8.64
CAediting_50046	chr1_39748483_+	ENSG00000084072.15	ENST00000495526	hsa-miR-10399-5p	39748477	39748483	7mer-m8	39748463	39748484	144	-8.64
CAediting_50083	chr1_39748700_+	ENSG00000084072.15	ENST00000495526	hsa-miR-106a-3p	39748693	39748699	7mer-m8	39748681	39748700	147	-15.52
CAediting_50040	chr1_39747956_+	ENSG00000084072.15	ENST00000495526	hsa-miR-10a-5p	39747953	39747959	7mer-m8	39747938	39747960	141	-12.89
CAediting_50040	chr1_39747956_+	ENSG00000084072.15	ENST00000495526	hsa-miR-10b-5p	39747953	39747959	7mer-m8	39747938	39747960	140	-11.43
CAediting_50031	chr1_39747624_+	ENSG00000084072.15	ENST00000495526	hsa-miR-1285-3p	39747618	39747624	7mer-m8	39747605	39747625	142	-17.62
CAediting_50031	chr1_39747624_+	ENSG00000084072.15	ENST00000495526	hsa-miR-1285-3p	39747618	39747624	7mer-m8	39747605	39747625	142	-17.62
CAediting_50083	chr1_39748700_+	ENSG00000084072.15	ENST00000495526	hsa-miR-148a-3p	39748696	39748702	7mer-m8	39748681	39748703	151	-14.18
CAediting_50083	chr1_39748700_+	ENSG00000084072.15	ENST00000495526	hsa-miR-148b-3p	39748696	39748702	7mer-m8	39748681	39748703	151	-16.43
CAediting_50049	chr1_39748499_+	ENSG00000084072.15	ENST00000495526	hsa-miR-150-5p	39748493	39748499	7mer-m8	39748479	39748500	140	-15.8
CAediting_50022	chr1_39747529_+	ENSG00000084072.15	ENST00000495526	hsa-miR-16-2-3p	39747526	39747531	6mer	39747511	39747532	145	-19.63
CAediting_50058	chr1_39748560_+	ENSG00000084072.15	ENST00000495526	hsa-miR-193b-5p	39748558	39748565	8mer-1a	39748544	39748565	142	-15.74
CAediting_50059	chr1_39748561_+	ENSG00000084072.15	ENST00000495526	hsa-miR-193b-5p	39748558	39748565	8mer-1a	39748544	39748565	142	-15.74
CAediting_50072	chr1_39748650_+	ENSG00000084072.15	ENST00000495526	hsa-miR-224-5p	39748647	39748654	8mer-1a	39748628	39748654	154	-19.57
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-302a-3p	39748487	39748493	7mer-m8	39748473	39748494	147	-15.45
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-302b-3p	39748487	39748493	7mer-m8	39748472	39748494	141	-9.54
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-302c-3p	39748487	39748493	7mer-m8	39748474	39748494	145	-11.96
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-302d-3p	39748487	39748493	7mer-m8	39748467	39748494	144	-12.96
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-302e	39748487	39748493	7mer-m8	39748478	39748494	141	-8.62
CAediting_50063	chr1_39748589_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3064-5p	39748588	39748593	6mer	39748574	39748594	141	-16.79
CAediting_50064	chr1_39748593_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3064-5p	39748588	39748593	6mer	39748574	39748594	141	-16.79
CAediting_50059	chr1_39748561_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3170	39748559	39748565	7mer-m8	39748545	39748566	140	-11.71
CAediting_50060	chr1_39748566_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3170	39748559	39748565	7mer-m8	39748545	39748566	140	-11.71
CAediting_50037	chr1_39747677_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3190-5p	39747671	39747677	7mer-m8	39747658	39747678	154	-22.77
CAediting_50041	chr1_39747988_+	ENSG00000084072.15	ENST00000495526	hsa-miR-324-3p	39747985	39747991	7mer-m8	39747970	39747992	148	-23.92
CAediting_50040	chr1_39747956_+	ENSG00000084072.15	ENST00000495526	hsa-miR-339-5p	39747952	39747958	7mer-m8	39747936	39747959	152	-18.84
CAediting_50028	chr1_39747567_+	ENSG00000084072.15	ENST00000495526	hsa-miR-34b-3p	39747562	39747568	7mer-m8	39747546	39747569	143	-9.39
CAediting_50026	chr1_39747562_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3614-5p	39747560	39747566	7mer-1a	39747543	39747566	155	-24.76
CAediting_50027	chr1_39747563_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3614-5p	39747560	39747566	7mer-1a	39747543	39747566	155	-24.76
CAediting_50021	chr1_39747486_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3664-5p	39747483	39747489	7mer-m8	39747469	39747490	153	-15.28
CAediting_50083	chr1_39748700_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3666	39748695	39748701	7mer-m8	39748682	39748702	147	-15.71
CAediting_50025	chr1_39747556_+	ENSG00000084072.15	ENST00000495526	hsa-miR-3689a-3p	39747549	39747555	7mer-m8	39747536	39747556	150	-24.97
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-372-3p	39748487	39748493	7mer-m8	39748474	39748494	153	-14.06
CAediting_50083	chr1_39748700_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4295	39748695	39748701	7mer-m8	39748685	39748702	150	-16.43
CAediting_50051	chr1_39748523_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4330	39748517	39748523	7mer-m8	39748508	39748524	144	-18.7
CAediting_50031	chr1_39747624_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4505	39747620	39747627	8mer-1a	39747609	39747627	151	-24.95
CAediting_50021	chr1_39747486_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4522	39747484	39747490	7mer-m8	39747471	39747491	148	-12.83
CAediting_50083	chr1_39748700_+	ENSG00000084072.15	ENST00000495526	hsa-miR-454-3p	39748695	39748701	7mer-m8	39748678	39748702	147	-12.62
CAediting_50040	chr1_39747956_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4725-5p	39747954	39747960	7mer-m8	39747941	39747961	140	-16.29
CAediting_50067	chr1_39748620_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4731-5p	39748616	39748621	6mer	39748602	39748622	142	-18.49
CAediting_50063	chr1_39748589_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4735-5p	39748583	39748589	7mer-m8	39748569	39748590	140	-5.19
CAediting_50043	chr1_39748450_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4759	39748448	39748454	7mer-m8	39748435	39748455	144	-15.31
CAediting_50051	chr1_39748523_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4777-3p	39748520	39748526	7mer-m8	39748506	39748527	143	-13.62
CAediting_50052	chr1_39748527_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4777-3p	39748520	39748526	7mer-m8	39748506	39748527	143	-13.62
CAediting_50054	chr1_39748551_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4781-3p	39748547	39748554	8mer-1a	39748531	39748554	150	-16.66
CAediting_50055	chr1_39748553_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4781-3p	39748547	39748554	8mer-1a	39748531	39748554	150	-16.66
CAediting_50041	chr1_39747988_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4793-3p	39747982	39747988	7mer-m8	39747967	39747989	149	-19.2
CAediting_50063	chr1_39748589_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4794	39748587	39748593	7mer-m8	39748573	39748594	140	-12.3
CAediting_50064	chr1_39748593_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4794	39748587	39748593	7mer-m8	39748573	39748594	140	-12.3
CAediting_50025	chr1_39747556_+	ENSG00000084072.15	ENST00000495526	hsa-miR-490-3p	39747553	39747559	7mer-m8	39747538	39747560	146	-17.33
CAediting_50040	chr1_39747956_+	ENSG00000084072.15	ENST00000495526	hsa-miR-504-5p	39747954	39747960	7mer-m8	39747941	39747961	146	-18.45
CAediting_50046	chr1_39748483_+	ENSG00000084072.15	ENST00000495526	hsa-miR-5089-5p	39748481	39748487	7mer-m8	39748467	39748488	148	-12.78
CAediting_50047	chr1_39748488_+	ENSG00000084072.15	ENST00000495526	hsa-miR-5089-5p	39748481	39748487	7mer-m8	39748467	39748488	148	-12.78
CAediting_50047	chr1_39748488_+	ENSG00000084072.15	ENST00000495526	hsa-miR-512-3p	39748486	39748492	7mer-m8	39748472	39748493	149	-15.43
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-512-3p	39748486	39748492	7mer-m8	39748472	39748493	149	-15.43
CAediting_50047	chr1_39748488_+	ENSG00000084072.15	ENST00000495526	hsa-miR-512-3p	39748486	39748492	7mer-m8	39748472	39748493	149	-15.43
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-512-3p	39748486	39748492	7mer-m8	39748472	39748493	149	-15.43
CAediting_50031	chr1_39747624_+	ENSG00000084072.15	ENST00000495526	hsa-miR-5189-5p	39747618	39747624	7mer-m8	39747600	39747625	153	-27.57
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-519d-3p	39748488	39748494	7mer-m8	39748475	39748495	146	-14.54
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-520a-3p	39748487	39748493	7mer-m8	39748473	39748494	140	-11.04
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-520b-3p	39748487	39748493	7mer-m8	39748475	39748494	141	-16.53
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-520c-3p	39748487	39748493	7mer-m8	39748474	39748494	146	-16.53
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-520d-3p	39748487	39748493	7mer-m8	39748471	39748494	142	-15.59
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-520e-3p	39748487	39748493	7mer-m8	39748474	39748494	140	-13.33
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-520g-3p	39748489	39748495	7mer-m8	39748473	39748496	151	-19.1
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-520h	39748489	39748495	7mer-m8	39748475	39748496	150	-15.08
CAediting_50048	chr1_39748491_+	ENSG00000084072.15	ENST00000495526	hsa-miR-526b-3p	39748488	39748494	7mer-m8	39748475	39748495	146	-16.21
CAediting_50069	chr1_39748628_+	ENSG00000084072.15	ENST00000495526	hsa-miR-526b-5p	39748624	39748630	7mer-m8	39748609	39748631	140	-18.34
CAediting_50037	chr1_39747677_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548s	39747670	39747676	7mer-m8	39747652	39747677	143	-13.74
CAediting_50029	chr1_39747592_+	ENSG00000084072.15	ENST00000495526	hsa-miR-5690	39747589	39747595	7mer-m8	39747576	39747596	145	-16.75
CAediting_50040	chr1_39747956_+	ENSG00000084072.15	ENST00000495526	hsa-miR-5699-3p	39747951	39747957	7mer-m8	39747937	39747958	146	-17.43
CAediting_50031	chr1_39747624_+	ENSG00000084072.15	ENST00000495526	hsa-miR-5787	39747620	39747627	8mer-1a	39747609	39747627	146	-24.34
CAediting_50035	chr1_39747647_+	ENSG00000084072.15	ENST00000495526	hsa-miR-593-3p	39747646	39747651	6mer	39747634	39747652	140	-18.96
CAediting_50024	chr1_39747543_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6086	39747540	39747546	7mer-m8	39747528	39747547	148	-21.43
CAediting_50031	chr1_39747624_+	ENSG00000084072.15	ENST00000495526	hsa-miR-612	39747618	39747624	7mer-m8	39747602	39747625	153	-25.71
CAediting_50043	chr1_39748450_+	ENSG00000084072.15	ENST00000495526	hsa-miR-625-3p	39748445	39748451	7mer-m8	39748431	39748452	151	-12.2
CAediting_50045	chr1_39748482_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6504-3p	39748477	39748483	7mer-m8	39748463	39748484	141	-12.32
CAediting_50046	chr1_39748483_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6504-3p	39748477	39748483	7mer-m8	39748463	39748484	141	-12.32
CAediting_50047	chr1_39748488_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6506-5p	39748482	39748488	7mer-m8	39748466	39748489	147	-13.59
CAediting_50024	chr1_39747543_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6516-5p	39747536	39747542	7mer-m8	39747521	39747543	150	-13.09
CAediting_50063	chr1_39748589_+	ENSG00000084072.15	ENST00000495526	hsa-miR-664a-5p	39748587	39748593	7mer-m8	39748571	39748594	141	-15.45
CAediting_50064	chr1_39748593_+	ENSG00000084072.15	ENST00000495526	hsa-miR-664a-5p	39748587	39748593	7mer-m8	39748571	39748594	141	-15.45
CAediting_50071	chr1_39748641_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6747-3p	39748636	39748642	7mer-m8	39748621	39748643	153	-23.56
CAediting_50071	chr1_39748641_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6752-3p	39748637	39748643	7mer-m8	39748625	39748644	147	-21.25
CAediting_50064	chr1_39748593_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6765-3p	39748590	39748596	7mer-m8	39748577	39748597	152	-20.77
CAediting_50049	chr1_39748499_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6778-3p	39748495	39748501	7mer-m8	39748482	39748502	143	-13.97
CAediting_50025	chr1_39747556_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6779-5p	39747549	39747555	7mer-m8	39747538	39747556	152	-25.71
CAediting_50025	chr1_39747556_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6780a-5p	39747549	39747555	7mer-m8	39747532	39747556	147	-23.83
CAediting_50085	chr1_39748720_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6794-3p	39748717	39748724	8mer-1a	39748705	39748724	144	-13.38
CAediting_50071	chr1_39748641_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6801-3p	39748638	39748645	8mer-1a	39748624	39748645	149	-22.29
CAediting_50023	chr1_39747537_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6807-5p	39747530	39747536	7mer-m8	39747516	39747537	152	-23.73
CAediting_50071	chr1_39748641_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6810-3p	39748638	39748645	8mer-1a	39748621	39748645	148	-23.92
CAediting_50040	chr1_39747956_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6818-3p	39747949	39747955	7mer-m8	39747935	39747956	146	-14.99
CAediting_50031	chr1_39747624_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6842-3p	39747621	39747628	8mer-1a	39747607	39747628	142	-19.79
CAediting_50032	chr1_39747628_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6842-3p	39747621	39747628	8mer-1a	39747607	39747628	142	-19.79
CAediting_50025	chr1_39747556_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6852-5p	39747552	39747557	6mer	39747538	39747558	140	-21.22
CAediting_50059	chr1_39748561_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6855-5p	39748559	39748565	7mer-m8	39748542	39748566	145	-15.95
CAediting_50060	chr1_39748566_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6855-5p	39748559	39748565	7mer-m8	39748542	39748566	145	-15.95
CAediting_50031	chr1_39747624_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6860	39747618	39747624	7mer-m8	39747604	39747625	153	-23.24
CAediting_50068	chr1_39748624_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6869-5p	39748621	39748628	8mer-1a	39748604	39748628	153	-23.57
CAediting_50069	chr1_39748628_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6869-5p	39748621	39748628	8mer-1a	39748604	39748628	153	-23.57
CAediting_50049	chr1_39748499_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6878-3p	39748497	39748504	8mer-1a	39748484	39748504	142	-14.14
CAediting_50021	chr1_39747486_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6888-3p	39747481	39747487	7mer-m8	39747468	39747488	151	-14.42
CAediting_50060	chr1_39748566_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6890-5p	39748560	39748566	7mer-m8	39748547	39748567	142	-12.53
CAediting_50088	chr1_39748754_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6892-5p	39748747	39748753	7mer-m8	39748734	39748754	140	-10.65
CAediting_50066	chr1_39748614_+	ENSG00000084072.15	ENST00000495526	hsa-miR-7151-3p	39748607	39748613	7mer-m8	39748593	39748614	145	-19.94
CAediting_50084	chr1_39748715_+	ENSG00000084072.15	ENST00000495526	hsa-miR-744-3p	39748710	39748717	8mer-1a	39748696	39748717	140	-10.72
CAediting_50066	chr1_39748614_+	ENSG00000084072.15	ENST00000495526	hsa-miR-8052	39748613	39748619	7mer-1a	39748601	39748619	143	-23.67
CAediting_50078	chr1_39748670_+	ENSG00000084072.15	ENST00000495526	hsa-miR-891b	39748668	39748675	8mer-1a	39748652	39748675	147	-15.56

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000084072.15	ENST00000495526	hsa-miR-605-3p	39748187	39748193	7mer-m8	39748175	39748194	145	-16.2
CAediting_393	chr1_1167164_+	ENSG00000084072.15	ENST00000495526	hsa-miR-200b-3p	39746276	39746282	7mer-m8	39746261	39746283	148	-10.83
CAediting_688080	chr9_63819626_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4477b	39746427	39746433	7mer-m8	39746414	39746434	154	-12.87
CAediting_688080	chr9_63819626_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4477b	39745825	39745831	7mer-m8	39745812	39745832	146	-16.1
CAediting_688080	chr9_63819626_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4477b	39749067	39749073	7mer-m8	39749051	39749074	147	-9.21
CAediting_393	chr1_1167164_+	ENSG00000084072.15	ENST00000495526	hsa-miR-200b-3p	39753459	39753465	7mer-m8	39753445	39753466	154	-13.22
CAediting_393	chr1_1167164_+	ENSG00000084072.15	ENST00000495526	hsa-miR-200b-3p	39753617	39753623	7mer-m8	39753603	39753624	140	-9.78
CAediting_688081	chr9_63819627_+	ENSG00000084072.15	ENST00000470213	hsa-miR-4477b	39753229	39753236	8mer-1a	39753215	39753236	148	-13.09
CAediting_688080	chr9_63819626_+	ENSG00000084072.15	ENST00000474804	hsa-miR-4477b	39749067	39749073	7mer-m8	39749051	39749074	147	-9.21
CAediting_688080	chr9_63819626_+	ENSG00000084072.15	ENST00000475350	hsa-miR-4477b	39749067	39749073	7mer-m8	39749051	39749074	147	-9.21
CAediting_393	chr1_1167164_+	ENSG00000084072.15	ENST00000475350	hsa-miR-200b-3p	39753459	39753465	7mer-m8	39753445	39753466	154	-13.22
CAediting_393	chr1_1167164_+	ENSG00000084072.15	ENST00000475350	hsa-miR-200b-3p	39753617	39753623	7mer-m8	39753603	39753624	140	-9.78
CAediting_1229415	chr17_67471547_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548aa	39746719	39746725	7mer-m8	39746697	39746726	162	-22.22
CAediting_77128	chr1_85133844_+	ENSG00000084072.15	ENST00000495526	hsa-miR-4423-3p	39745482	39745488	7mer-m8	39745469	39745489	151	-15.78
CAediting_524911	chr7_5495852_-	ENSG00000084072.15	ENST00000495526	hsa-miR-589-3p	39747962	39747969	8mer-1a	39747946	39747969	156	-19.31
CAediting_1229415	chr17_67471547_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548aa	39748934	39748939	6mer	39748924	39748946	162	-12.2
CAediting_1229415	chr17_67471547_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548aa	39748939	39748946	8mer-1a	39748924	39748946	162	-12.2
CAediting_396018	chr5_1062918_-	ENSG00000084072.15	ENST00000495526	hsa-miR-4635	39749068	39749074	7mer-m8	39749055	39749075	145	-12.55
CAediting_1229415	chr17_67471547_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548aa	39753607	39753613	7mer-m8	39753591	39753614	159	-18.09
CAediting_1368054	chr19_46709310_-	ENSG00000084072.15	ENST00000495526	hsa-miR-320e	39753558	39753565	8mer-1a	39753548	39753565	143	-14.42
CAediting_604450	chr7_133034877_-	ENSG00000084072.15	ENST00000470213	hsa-miR-3654	39753157	39753163	7mer-m8	39753145	39753164	152	-20.46
CAediting_77128	chr1_85133844_+	ENSG00000084072.15	ENST00000474804	hsa-miR-4423-3p	39745482	39745488	7mer-m8	39745469	39745489	151	-15.78
CAediting_1229415	chr17_67471547_+	ENSG00000084072.15	ENST00000474804	hsa-miR-548aa	39748934	39748939	6mer	39748924	39748946	162	-12.2
CAediting_1229415	chr17_67471547_+	ENSG00000084072.15	ENST00000474804	hsa-miR-548aa	39748939	39748946	8mer-1a	39748924	39748946	162	-12.2
CAediting_396018	chr5_1062918_-	ENSG00000084072.15	ENST00000474804	hsa-miR-4635	39749068	39749074	7mer-m8	39749055	39749075	145	-12.55
CAediting_77128	chr1_85133844_+	ENSG00000084072.15	ENST00000475350	hsa-miR-4423-3p	39745482	39745488	7mer-m8	39745469	39745489	151	-15.78
CAediting_1229415	chr17_67471547_+	ENSG00000084072.15	ENST00000475350	hsa-miR-548aa	39748934	39748939	6mer	39748924	39748946	162	-12.2
CAediting_1229415	chr17_67471547_+	ENSG00000084072.15	ENST00000475350	hsa-miR-548aa	39748939	39748946	8mer-1a	39748924	39748946	162	-12.2
CAediting_396018	chr5_1062918_-	ENSG00000084072.15	ENST00000475350	hsa-miR-4635	39749068	39749074	7mer-m8	39749055	39749075	145	-12.55
CAediting_1229415	chr17_67471547_+	ENSG00000084072.15	ENST00000475350	hsa-miR-548aa	39753607	39753613	7mer-m8	39753591	39753614	159	-18.09
CAediting_1368054	chr19_46709310_-	ENSG00000084072.15	ENST00000475350	hsa-miR-320e	39753558	39753565	8mer-1a	39753548	39753565	143	-14.42
CAediting_1524209	chrX_134546392_-	ENSG00000084072.15	ENST00000495526	hsa-miR-503-5p	39746002	39746008	7mer-1a	39745985	39746008	142	-29.43

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1160181	chr17_7017644_-	ENSG00000084072.15	ENST00000495526	hsa-miR-195-3p	39745880	39745887	8mer-1a	39745866	39745887	147	-4.33
CAediting_1229413	chr17_67471544_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548aa	39748344	39748350	7mer-m8	39748328	39748351	152	-7.84
CAediting_1229414	chr17_67471546_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548aa	39748344	39748350	7mer-m8	39748328	39748351	152	-7.84
CAediting_1229415	chr17_67471547_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548aa	39748344	39748350	7mer-m8	39748328	39748351	152	-7.84
CAediting_1229413	chr17_67471544_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548aa	39746058	39746064	7mer-m8	39746042	39746065	155	-12.56
CAediting_1229414	chr17_67471546_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548aa	39746058	39746064	7mer-m8	39746042	39746065	155	-12.56
CAediting_1229415	chr17_67471547_+	ENSG00000084072.15	ENST00000495526	hsa-miR-548aa	39746058	39746064	7mer-m8	39746042	39746065	155	-12.56
CAediting_524911	chr7_5495852_-	ENSG00000084072.15	ENST00000495526	hsa-miR-589-3p	39748170	39748176	7mer-m8	39748150	39748177	153	-15.98
CAediting_580943	chr7_100356700_+	ENSG00000084072.15	ENST00000495526	hsa-miR-6840-3p	39745630	39745637	8mer-1a	39745617	39745637	149	-22.03
CAediting_468389	chr6_31355314_-	ENSG00000084072.15	ENST00000495526	hsa-miR-6891-5p	39746262	39746268	7mer-m8	39746251	39746269	140	-13.77

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for PPIE

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000480169.1	processed_transcript
ENST00000495526.4	nonsense_mediated_decay

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_50000	ENST00000480169.1	chr1_39739086_+	-282.80	-282.80	-300.80
CAediting_50001	ENST00000480169.1	chr1_39739120_+	-286.60	-282.80	-300.80
CAediting_50002	ENST00000480169.1	chr1_39739128_+	-285.40	-282.80	-300.80
CAediting_50003	ENST00000480169.1	chr1_39739137_+	-282.80	-282.80	-300.80
CAediting_50004	ENST00000480169.1	chr1_39739140_+	-282.80	-282.80	-300.80
CAediting_50005	ENST00000480169.1	chr1_39739143_+	-284.30	-282.80	-300.80
CAediting_50006	ENST00000480169.1	chr1_39739196_+	-282.80	-282.80	-300.80
CAediting_50007	ENST00000480169.1	chr1_39739197_+	-283.60	-282.80	-300.80
CAediting_50008	ENST00000480169.1	chr1_39739198_+	-282.80	-282.80	-300.80
CAediting_50009	ENST00000480169.1	chr1_39739215_+	-284.00	-282.80	-300.80
CAediting_50010	ENST00000480169.1	chr1_39739216_+	-284.70	-282.80	-300.80
CAediting_50011	ENST00000480169.1	chr1_39739292_+	-284.10	-282.80	-300.80
CAediting_50021	ENST00000495526.4	chr1_39747486_+	-1573.90	-1567.70	-1627.90
CAediting_50022	ENST00000495526.4	chr1_39747529_+	-1570.30	-1567.70	-1627.90
CAediting_50023	ENST00000495526.4	chr1_39747537_+	-1567.30	-1567.70	-1627.90
CAediting_50024	ENST00000495526.4	chr1_39747543_+	-1567.70	-1567.70	-1627.90
CAediting_50025	ENST00000495526.4	chr1_39747556_+	-1571.50	-1567.70	-1627.90
CAediting_50026	ENST00000495526.4	chr1_39747562_+	-1567.40	-1567.70	-1627.90
CAediting_50027	ENST00000495526.4	chr1_39747563_+	-1567.40	-1567.70	-1627.90
CAediting_50028	ENST00000495526.4	chr1_39747567_+	-1568.00	-1567.70	-1627.90
CAediting_50029	ENST00000495526.4	chr1_39747592_+	-1567.40	-1567.70	-1627.90
CAediting_50030	ENST00000495526.4	chr1_39747604_+	-1567.00	-1567.70	-1627.90
CAediting_50031	ENST00000495526.4	chr1_39747624_+	-1571.60	-1567.70	-1627.90
CAediting_50032	ENST00000495526.4	chr1_39747628_+	-1567.80	-1567.70	-1627.90
CAediting_50033	ENST00000495526.4	chr1_39747629_+	-1567.70	-1567.70	-1627.90
CAediting_50034	ENST00000495526.4	chr1_39747638_+	-1567.70	-1567.70	-1627.90
CAediting_50035	ENST00000495526.4	chr1_39747647_+	-1567.40	-1567.70	-1627.90
CAediting_50036	ENST00000495526.4	chr1_39747664_+	-1568.00	-1567.70	-1627.90
CAediting_50037	ENST00000495526.4	chr1_39747677_+	-1566.90	-1567.70	-1627.90
CAediting_50038	ENST00000495526.4	chr1_39747688_+	-1570.90	-1567.70	-1627.90
CAediting_50039	ENST00000495526.4	chr1_39747740_+	-1567.70	-1567.70	-1627.90
CAediting_50040	ENST00000495526.4	chr1_39747956_+	-1567.70	-1567.70	-1627.90
CAediting_50041	ENST00000495526.4	chr1_39747988_+	-1567.40	-1567.70	-1627.90
CAediting_50042	ENST00000495526.4	chr1_39748033_+	-1567.30	-1567.70	-1627.90
CAediting_50043	ENST00000495526.4	chr1_39748450_+	-1567.40	-1567.70	-1627.90
CAediting_50044	ENST00000495526.4	chr1_39748474_+	-1566.70	-1567.70	-1627.90
CAediting_50045	ENST00000495526.4	chr1_39748482_+	-1567.80	-1567.70	-1627.90
CAediting_50046	ENST00000495526.4	chr1_39748483_+	-1567.70	-1567.70	-1627.90
CAediting_50047	ENST00000495526.4	chr1_39748488_+	-1567.00	-1567.70	-1627.90
CAediting_50048	ENST00000495526.4	chr1_39748491_+	-1567.30	-1567.70	-1627.90
CAediting_50049	ENST00000495526.4	chr1_39748499_+	-1566.80	-1567.70	-1627.90
CAediting_50050	ENST00000495526.4	chr1_39748515_+	-1567.20	-1567.70	-1627.90
CAediting_50051	ENST00000495526.4	chr1_39748523_+	-1566.80	-1567.70	-1627.90
CAediting_50052	ENST00000495526.4	chr1_39748527_+	-1567.40	-1567.70	-1627.90
CAediting_50053	ENST00000495526.4	chr1_39748536_+	-1567.40	-1567.70	-1627.90
CAediting_50054	ENST00000495526.4	chr1_39748551_+	-1568.00	-1567.70	-1627.90
CAediting_50055	ENST00000495526.4	chr1_39748553_+	-1567.30	-1567.70	-1627.90
CAediting_50056	ENST00000495526.4	chr1_39748555_+	-1574.30	-1567.70	-1627.90
CAediting_50057	ENST00000495526.4	chr1_39748559_+	-1567.20	-1567.70	-1627.90
CAediting_50058	ENST00000495526.4	chr1_39748560_+	-1567.80	-1567.70	-1627.90
CAediting_50059	ENST00000495526.4	chr1_39748561_+	-1567.70	-1567.70	-1627.90
CAediting_50060	ENST00000495526.4	chr1_39748566_+	-1573.50	-1567.70	-1627.90
CAediting_50061	ENST00000495526.4	chr1_39748577_+	-1567.80	-1567.70	-1627.90
CAediting_50062	ENST00000495526.4	chr1_39748581_+	-1567.70	-1567.70	-1627.90
CAediting_50063	ENST00000495526.4	chr1_39748589_+	-1574.00	-1567.70	-1627.90
CAediting_50064	ENST00000495526.4	chr1_39748593_+	-1571.60	-1567.70	-1627.90
CAediting_50065	ENST00000495526.4	chr1_39748604_+	-1569.90	-1567.70	-1627.90
CAediting_50066	ENST00000495526.4	chr1_39748614_+	-1567.30	-1567.70	-1627.90
CAediting_50067	ENST00000495526.4	chr1_39748620_+	-1567.00	-1567.70	-1627.90
CAediting_50068	ENST00000495526.4	chr1_39748624_+	-1567.70	-1567.70	-1627.90
CAediting_50069	ENST00000495526.4	chr1_39748628_+	-1571.30	-1567.70	-1627.90
CAediting_50070	ENST00000495526.4	chr1_39748637_+	-1566.80	-1567.70	-1627.90
CAediting_50071	ENST00000495526.4	chr1_39748641_+	-1567.00	-1567.70	-1627.90
CAediting_50072	ENST00000495526.4	chr1_39748650_+	-1568.00	-1567.70	-1627.90
CAediting_50073	ENST00000495526.4	chr1_39748655_+	-1567.20	-1567.70	-1627.90
CAediting_50074	ENST00000495526.4	chr1_39748656_+	-1567.70	-1567.70	-1627.90
CAediting_50075	ENST00000495526.4	chr1_39748660_+	-1568.90	-1567.70	-1627.90
CAediting_50076	ENST00000495526.4	chr1_39748661_+	-1571.90	-1567.70	-1627.90
CAediting_50077	ENST00000495526.4	chr1_39748663_+	-1566.80	-1567.70	-1627.90
CAediting_50078	ENST00000495526.4	chr1_39748670_+	-1574.30	-1567.70	-1627.90
CAediting_50079	ENST00000495526.4	chr1_39748680_+	-1566.80	-1567.70	-1627.90
CAediting_50080	ENST00000495526.4	chr1_39748681_+	-1574.40	-1567.70	-1627.90
CAediting_50081	ENST00000495526.4	chr1_39748685_+	-1566.90	-1567.70	-1627.90
CAediting_50082	ENST00000495526.4	chr1_39748687_+	-1568.00	-1567.70	-1627.90
CAediting_50083	ENST00000495526.4	chr1_39748700_+	-1568.00	-1567.70	-1627.90
CAediting_50084	ENST00000495526.4	chr1_39748715_+	-1567.70	-1567.70	-1627.90
CAediting_50085	ENST00000495526.4	chr1_39748720_+	-1568.10	-1567.70	-1627.90
CAediting_50086	ENST00000495526.4	chr1_39748725_+	-1574.10	-1567.70	-1627.90
CAediting_50087	ENST00000495526.4	chr1_39748726_+	-1568.00	-1567.70	-1627.90
CAediting_50088	ENST00000495526.4	chr1_39748754_+	-1571.70	-1567.70	-1627.90

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Relation with ADAR for PPIE

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BLCA	CAediting_50040	chr1_39747956_+	0.00883984171394165	0.340843356523489	.	.	.	.
BRCA	CAediting_50040	chr1_39747956_+	0.000852043556869264	0.361341984109233	.	.	.	.
LUAD	CAediting_50040	chr1_39747956_+	0.000371374495385694	0.388349682370463	.	.	.	.
BLCA	CAediting_50052	chr1_39748527_+	.	.	.	.	0.0441571276661335	0.267619831069482
LUAD	CAediting_50066	chr1_39748614_+	0.0321159606288894	0.242917753269275	.	.	.	.

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Relation with cancer stages for PPIE

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
KIRC	pathologic_stage	CAediting_50066	chr1_39748614_+	0.0282902028890711	-0.301407356886197

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Relation with survival for PPIE

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for PPIE

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for PPIE

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene