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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: B3GNT3 (CAeditome ID:10331)

Gene summary for B3GNT3

check button Gene summary
Gene informationGene symbol

B3GNT3

Gene ID

10331

Gene nameUDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3
SynonymsB3GAL-T8|B3GN-T3|B3GNT-3|HP10328|TMEM3|beta3Gn-T3
Cytomap

19p13.11

Type of geneprotein-coding
DescriptionN-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase 8UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase 8beta-1,3-GalTase 8beta-1,3-Gn-T3beta-1,3-N-acetylglucosaminyltr
Modification date20210518
UniProtAcc

Q9Y2A9

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
B3GNT3

GO:0008532

N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3

11042166

B3GNT3

GO:0030311

N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3

11042166


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RNA A-to-I events for B3GNT3

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000179913.9
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1317432(17803766, +), CAediting_1317433(17803771, +), CAediting_1317434(17803960, +), CAediting_1317435(17803980, +), CAediting_1317436(17805299, +), CAediting_1317437(17805867, +), CAediting_1317438(17805897, +), CAediting_1317439(17805910, +), CAediting_1317440(17805915, +), CAediting_1317441(17806775, +), CAediting_1317442(17806776, +), CAediting_1317443(17806858, +), CAediting_1317444(17807436, +), CAediting_1317445(17807447, +), CAediting_1317446(17808834, +), CAediting_1317447(17808860, +), CAediting_1317448(17808895, +), CAediting_1317449(17808920, +), CAediting_1317450(17808946, +), CAediting_1317451(17808954, +), CAediting_1317452(17808962, +), CAediting_1317453(17808963, +), CAediting_1317454(17808976, +), CAediting_1317455(17808989, +), CAediting_1317456(17808995, +), CAediting_1317457(17809000, +), CAediting_1317458(17809008, +), CAediting_1317459(17809014, +), CAediting_1317460(17809017, +), CAediting_1317461(17809019, +), CAediting_1317462(17809031, +), CAediting_1317463(17809043, +), CAediting_1317464(17809048, +), CAediting_1317465(17809055, +), CAediting_1317466(17809056, +), CAediting_1317467(17809063, +), CAediting_1317468(17809068, +), CAediting_1317469(17809094, +), CAediting_1317470(17809096, +), CAediting_1317471(17809108, +), CAediting_1317472(17809110, +), CAediting_1317473(17809117, +), CAediting_1317474(17809292, +), CAediting_1317475(17809318, +), CAediting_1317476(17809319, +), CAediting_1317477(17809336, +), CAediting_1317478(17809364, +), CAediting_1317479(17809448, +), CAediting_1317480(17809452, +), CAediting_1317481(17809502, +), CAediting_1317482(17809510, +), CAediting_1317483(17809511, +), CAediting_1317484(17809526, +), CAediting_1317485(17809527, +), CAediting_1317486(17809533, +), CAediting_1317487(17809546, +), CAediting_1317488(17809547, +), CAediting_1317489(17809564, +), CAediting_1317490(17809584, +), CAediting_1317491(17809586, +), CAediting_1317492(17809588, +), CAediting_1317493(17809602, +), CAediting_1317494(17809608, +), CAediting_1317495(17809613, +), CAediting_1317496(17809629, +), CAediting_1317497(17809632, +), CAediting_1317498(17809634, +), CAediting_1317499(17809646, +), CAediting_1317500(17809658, +), CAediting_1317501(17809669, +), CAediting_1317502(17809670, +), CAediting_1317503(17809671, +), CAediting_1317504(17809678, +), CAediting_1317505(17809683, +), CAediting_1317506(17809684, +), CAediting_1317507(17809688, +), CAediting_1317508(17809709, +), CAediting_1317509(17809710, +), CAediting_1317510(17809711, +), CAediting_1317511(17809723, +), CAediting_1317512(17809725, +), CAediting_1317513(17809732, +), CAediting_1317514(17809739, +), CAediting_1317515(17810213, +), CAediting_1317516(17810217, +), CAediting_1317517(17810219, +), CAediting_1317518(17810233, +), CAediting_1317519(17810235, +), CAediting_1317520(17810236, +), CAediting_1317521(17810241, +), CAediting_1317522(17810258, +), CAediting_1317523(17810271, +), CAediting_1317524(17810276, +), CAediting_1317525(17810278, +), CAediting_1317526(17810281, +), CAediting_1317527(17810311, +), CAediting_1317528(17810312, +), CAediting_1317529(17810316, +), CAediting_1317530(17810322, +), CAediting_1317531(17810330, +), CAediting_1317532(17810331, +), CAediting_1317533(17810338, +), CAediting_1317534(17810344, +), CAediting_1317535(17810351, +), CAediting_1317536(17810355, +), CAediting_1317537(17810359, +), CAediting_1317538(17810360, +), CAediting_1317539(17810362, +), CAediting_1317540(17810370, +), CAediting_1317541(17810392, +), CAediting_1317542(17810394, +), CAediting_1317543(17810604, +), CAediting_1317544(17810618, +), CAediting_1317545(17810620, +), CAediting_1317546(17810626, +), CAediting_1317547(17810627, +), CAediting_1317548(17810632, +), CAediting_1317549(17810635, +), CAediting_1317550(17810643, +), CAediting_1317551(17810649, +), CAediting_1317552(17810653, +), CAediting_1317553(17810662, +), CAediting_1317554(17810672, +), CAediting_1317555(17810680, +), CAediting_1317556(17810681, +), CAediting_1317557(17810683, +), CAediting_1317558(17810706, +), CAediting_1317559(17810717, +), CAediting_1317560(17810720, +), CAediting_1317561(17810721, +), CAediting_1317562(17810724, +), CAediting_1317563(17810734, +), CAediting_1317564(17810738, +), CAediting_1317565(17810752, +), CAediting_1317566(17810760, +), CAediting_1317567(17810766, +), CAediting_1317568(17810777, +), CAediting_1317569(17810787, +), CAediting_1317570(17810789, +), CAediting_1317571(17810790, +), CAediting_1317572(17810801, +), CAediting_1317573(17810802, +), CAediting_1317574(17810807, +), CAediting_1317575(17810808, +), CAediting_1317576(17810809, +), CAediting_1317577(17810822, +), CAediting_1317578(17810826, +), CAediting_1317579(17810831, +), CAediting_1317580(17810833, +), CAediting_1317581(17810838, +), CAediting_1317582(17810841, +), CAediting_1317583(17810872, +), CAediting_1317584(17810930, +), CAediting_1317585(17810953, +), CAediting_1317586(17810954, +), CAediting_1317587(17810994, +), CAediting_1317588(17811008, +), CAediting_1317589(17811027, +), CAediting_1317590(17811030, +), CAediting_1317591(17811031, +), CAediting_1317592(17811038, +), CAediting_1317593(17811063, +), CAediting_1317594(17811093, +), CAediting_1317595(17811103, +), CAediting_1317596(17811116, +), CAediting_1317597(17811123, +), CAediting_1317598(17811129, +), CAediting_1317599(17811134, +), CAediting_1317600(17811169, +), CAediting_1317601(17811177, +),

Top

RNA editing positional annotations for B3GNT3 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1317432chr19_17803766_+intronic
CAediting_1317433chr19_17803771_+intronic
CAediting_1317434chr19_17803960_+intronic
CAediting_1317435chr19_17803980_+intronic
CAediting_1317436chr19_17805299_+intronic
CAediting_1317437chr19_17805867_+intronic
CAediting_1317438chr19_17805897_+intronic
CAediting_1317439chr19_17805910_+intronic
CAediting_1317440chr19_17805915_+intronic
CAediting_1317441chr19_17806775_+intronic
CAediting_1317442chr19_17806776_+intronic
CAediting_1317443chr19_17806858_+intronic
CAediting_1317444chr19_17807436_+intronic
CAediting_1317445chr19_17807447_+intronic
CAediting_1317446chr19_17808834_+intronic
CAediting_1317447chr19_17808860_+intronic
CAediting_1317448chr19_17808895_+intronic
CAediting_1317449chr19_17808920_+intronic
CAediting_1317450chr19_17808946_+intronic
CAediting_1317451chr19_17808954_+intronic
CAediting_1317452chr19_17808962_+intronic
CAediting_1317453chr19_17808963_+intronic
CAediting_1317454chr19_17808976_+intronic
CAediting_1317455chr19_17808989_+intronic
CAediting_1317456chr19_17808995_+intronic
CAediting_1317457chr19_17809000_+intronic
CAediting_1317458chr19_17809008_+intronic
CAediting_1317459chr19_17809014_+intronic
CAediting_1317460chr19_17809017_+intronic
CAediting_1317461chr19_17809019_+intronic
CAediting_1317462chr19_17809031_+intronic
CAediting_1317463chr19_17809043_+intronic
CAediting_1317464chr19_17809048_+intronic
CAediting_1317465chr19_17809055_+intronic
CAediting_1317466chr19_17809056_+intronic
CAediting_1317467chr19_17809063_+intronic
CAediting_1317468chr19_17809068_+intronic
CAediting_1317469chr19_17809094_+intronic
CAediting_1317470chr19_17809096_+intronic
CAediting_1317471chr19_17809108_+intronic
CAediting_1317472chr19_17809110_+intronic
CAediting_1317473chr19_17809117_+intronic
CAediting_1317474chr19_17809292_+intronic
CAediting_1317475chr19_17809318_+intronic
CAediting_1317476chr19_17809319_+intronic
CAediting_1317477chr19_17809336_+intronic
CAediting_1317478chr19_17809364_+intronic
CAediting_1317479chr19_17809448_+intronic
CAediting_1317480chr19_17809452_+intronic
CAediting_1317481chr19_17809502_+intronic
CAediting_1317482chr19_17809510_+intronic
CAediting_1317483chr19_17809511_+intronic
CAediting_1317484chr19_17809526_+intronic
CAediting_1317485chr19_17809527_+intronic
CAediting_1317486chr19_17809533_+intronic
CAediting_1317487chr19_17809546_+intronic
CAediting_1317488chr19_17809547_+intronic
CAediting_1317489chr19_17809564_+intronic
CAediting_1317490chr19_17809584_+intronic
CAediting_1317491chr19_17809586_+intronic
CAediting_1317492chr19_17809588_+intronic
CAediting_1317493chr19_17809602_+intronic
CAediting_1317494chr19_17809608_+intronic
CAediting_1317495chr19_17809613_+intronic
CAediting_1317496chr19_17809629_+intronic
CAediting_1317497chr19_17809632_+intronic
CAediting_1317498chr19_17809634_+intronic
CAediting_1317499chr19_17809646_+intronic
CAediting_1317500chr19_17809658_+intronic
CAediting_1317501chr19_17809669_+intronic
CAediting_1317502chr19_17809670_+intronic
CAediting_1317503chr19_17809671_+intronic
CAediting_1317504chr19_17809678_+intronic
CAediting_1317505chr19_17809683_+intronic
CAediting_1317506chr19_17809684_+intronic
CAediting_1317507chr19_17809688_+intronic
CAediting_1317508chr19_17809709_+intronic
CAediting_1317509chr19_17809710_+intronic
CAediting_1317510chr19_17809711_+intronic
CAediting_1317511chr19_17809723_+intronic
CAediting_1317512chr19_17809725_+intronic
CAediting_1317513chr19_17809732_+intronic
CAediting_1317514chr19_17809739_+intronic
CAediting_1317515chr19_17810213_+intronic
CAediting_1317516chr19_17810217_+intronic
CAediting_1317517chr19_17810219_+intronic
CAediting_1317518chr19_17810233_+intronic
CAediting_1317519chr19_17810235_+intronic
CAediting_1317520chr19_17810236_+intronic
CAediting_1317521chr19_17810241_+intronic
CAediting_1317522chr19_17810258_+intronic
CAediting_1317523chr19_17810271_+intronic
CAediting_1317524chr19_17810276_+intronic
CAediting_1317525chr19_17810278_+intronic
CAediting_1317526chr19_17810281_+intronic
CAediting_1317527chr19_17810311_+intronic
CAediting_1317528chr19_17810312_+intronic
CAediting_1317529chr19_17810316_+intronic
CAediting_1317530chr19_17810322_+intronic
CAediting_1317531chr19_17810330_+intronic
CAediting_1317532chr19_17810331_+intronic
CAediting_1317533chr19_17810338_+intronic
CAediting_1317534chr19_17810344_+intronic
CAediting_1317535chr19_17810351_+intronic
CAediting_1317536chr19_17810355_+intronic
CAediting_1317537chr19_17810359_+intronic
CAediting_1317538chr19_17810360_+intronic
CAediting_1317539chr19_17810362_+intronic
CAediting_1317540chr19_17810370_+intronic
CAediting_1317541chr19_17810392_+intronic
CAediting_1317542chr19_17810394_+intronic
CAediting_1317543chr19_17810604_+intronic
CAediting_1317544chr19_17810618_+intronic
CAediting_1317545chr19_17810620_+intronic
CAediting_1317546chr19_17810626_+intronic
CAediting_1317547chr19_17810627_+intronic
CAediting_1317548chr19_17810632_+intronic
CAediting_1317549chr19_17810635_+intronic
CAediting_1317550chr19_17810643_+intronic
CAediting_1317551chr19_17810649_+intronic
CAediting_1317552chr19_17810653_+intronic
CAediting_1317553chr19_17810662_+intronic
CAediting_1317554chr19_17810672_+intronic
CAediting_1317555chr19_17810680_+intronic
CAediting_1317556chr19_17810681_+intronic
CAediting_1317557chr19_17810683_+intronic
CAediting_1317558chr19_17810706_+intronic
CAediting_1317559chr19_17810717_+intronic
CAediting_1317560chr19_17810720_+intronic
CAediting_1317561chr19_17810721_+intronic
CAediting_1317562chr19_17810724_+intronic
CAediting_1317563chr19_17810734_+intronic
CAediting_1317564chr19_17810738_+intronic
CAediting_1317565chr19_17810752_+intronic
CAediting_1317566chr19_17810760_+intronic
CAediting_1317567chr19_17810766_+intronic
CAediting_1317568chr19_17810777_+intronic
CAediting_1317569chr19_17810787_+intronic
CAediting_1317570chr19_17810789_+intronic
CAediting_1317571chr19_17810790_+intronic
CAediting_1317572chr19_17810801_+intronic
CAediting_1317573chr19_17810802_+intronic
CAediting_1317574chr19_17810807_+intronic
CAediting_1317575chr19_17810808_+intronic
CAediting_1317576chr19_17810809_+intronic
CAediting_1317577chr19_17810822_+intronic
CAediting_1317578chr19_17810826_+intronic
CAediting_1317579chr19_17810831_+intronic
CAediting_1317580chr19_17810833_+intronic
CAediting_1317581chr19_17810838_+intronic
CAediting_1317582chr19_17810841_+intronic
CAediting_1317583chr19_17810872_+intronic
CAediting_1317584chr19_17810930_+intronic
CAediting_1317585chr19_17810953_+intronic
CAediting_1317586chr19_17810954_+intronic
CAediting_1317587chr19_17810994_+intronic
CAediting_1317588chr19_17811008_+intronic
CAediting_1317589chr19_17811027_+intronic
CAediting_1317590chr19_17811030_+intronic
CAediting_1317591chr19_17811031_+intronic
CAediting_1317592chr19_17811038_+intronic
CAediting_1317593chr19_17811063_+intronic
CAediting_1317594chr19_17811093_+intronic
CAediting_1317595chr19_17811103_+intronic
CAediting_1317596chr19_17811116_+intronic
CAediting_1317597chr19_17811123_+intronic
CAediting_1317598chr19_17811129_+intronic
CAediting_1317599chr19_17811134_+intronic
CAediting_1317600chr19_17811169_+intronic
CAediting_1317601chr19_17811177_+intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1317432chr19_17803766_+SINEAluAluJo
CAediting_1317433chr19_17803771_+SINEAluAluJo
CAediting_1317434chr19_17803960_+SINEAluAluJr
CAediting_1317435chr19_17803980_+SINEAluAluJr
CAediting_1317436chr19_17805299_+SINEAluAluJo
CAediting_1317437chr19_17805867_+SINEAluAluJo
CAediting_1317438chr19_17805897_+SINEAluAluJo
CAediting_1317439chr19_17805910_+SINEAluAluJo
CAediting_1317440chr19_17805915_+SINEAluAluJo
CAediting_1317441chr19_17806775_+SINEAluAluSc
CAediting_1317442chr19_17806776_+SINEAluAluSc
CAediting_1317443chr19_17806858_+SINEAluAluSc
CAediting_1317444chr19_17807436_+SINEAluAluSz
CAediting_1317445chr19_17807447_+SINEAluAluSz
CAediting_1317446chr19_17808834_+SINEAluAluSx1
CAediting_1317447chr19_17808860_+SINEAluAluSx1
CAediting_1317448chr19_17808895_+SINEAluAluSx1
CAediting_1317449chr19_17808920_+SINEAluAluSx1
CAediting_1317450chr19_17808946_+SINEAluAluSx1
CAediting_1317451chr19_17808954_+SINEAluAluSx1
CAediting_1317452chr19_17808962_+SINEAluAluSx1
CAediting_1317453chr19_17808963_+SINEAluAluSx1
CAediting_1317454chr19_17808976_+SINEAluAluSx1
CAediting_1317455chr19_17808989_+SINEAluAluSx1
CAediting_1317456chr19_17808995_+SINEAluAluSx1
CAediting_1317457chr19_17809000_+SINEAluAluSx1
CAediting_1317458chr19_17809008_+SINEAluAluSx1
CAediting_1317459chr19_17809014_+SINEAluAluSx1
CAediting_1317460chr19_17809017_+SINEAluAluSx1
CAediting_1317461chr19_17809019_+SINEAluAluSx1
CAediting_1317462chr19_17809031_+SINEAluAluSx1
CAediting_1317463chr19_17809043_+SINEAluAluSx1
CAediting_1317464chr19_17809048_+SINEAluAluSx1
CAediting_1317465chr19_17809055_+SINEAluAluSx1
CAediting_1317466chr19_17809056_+SINEAluAluSx1
CAediting_1317467chr19_17809063_+SINEAluAluSx1
CAediting_1317468chr19_17809068_+SINEAluAluSx1
CAediting_1317469chr19_17809094_+SINEAluAluSx1
CAediting_1317470chr19_17809096_+SINEAluAluSx1
CAediting_1317471chr19_17809108_+SINEAluAluSx1
CAediting_1317472chr19_17809110_+SINEAluAluSx1
CAediting_1317473chr19_17809117_+SINEAluAluSx1
CAediting_1317475chr19_17809318_+SINEAluFLAM_C
CAediting_1317476chr19_17809319_+SINEAluFLAM_C
CAediting_1317477chr19_17809336_+SINEAluFLAM_C
CAediting_1317478chr19_17809364_+SINEAluFLAM_C
CAediting_1317479chr19_17809448_+SINEAluAluSz
CAediting_1317480chr19_17809452_+SINEAluAluSz
CAediting_1317481chr19_17809502_+SINEAluAluSz
CAediting_1317482chr19_17809510_+SINEAluAluSz
CAediting_1317483chr19_17809511_+SINEAluAluSz
CAediting_1317484chr19_17809526_+SINEAluAluSz
CAediting_1317485chr19_17809527_+SINEAluAluSz
CAediting_1317486chr19_17809533_+SINEAluAluSz
CAediting_1317487chr19_17809546_+SINEAluAluSz
CAediting_1317488chr19_17809547_+SINEAluAluSz
CAediting_1317489chr19_17809564_+SINEAluAluSz
CAediting_1317490chr19_17809584_+SINEAluAluSz
CAediting_1317491chr19_17809586_+SINEAluAluSz
CAediting_1317492chr19_17809588_+SINEAluAluSz
CAediting_1317493chr19_17809602_+SINEAluAluSz
CAediting_1317494chr19_17809608_+SINEAluAluSz
CAediting_1317495chr19_17809613_+SINEAluAluSz
CAediting_1317496chr19_17809629_+SINEAluAluSz
CAediting_1317497chr19_17809632_+SINEAluAluSz
CAediting_1317498chr19_17809634_+SINEAluAluSz
CAediting_1317499chr19_17809646_+SINEAluAluSz
CAediting_1317500chr19_17809658_+SINEAluAluSz
CAediting_1317501chr19_17809669_+SINEAluAluSz
CAediting_1317502chr19_17809670_+SINEAluAluSz
CAediting_1317503chr19_17809671_+SINEAluAluSz
CAediting_1317504chr19_17809678_+SINEAluAluSz
CAediting_1317505chr19_17809683_+SINEAluAluSz
CAediting_1317506chr19_17809684_+SINEAluAluSz
CAediting_1317507chr19_17809688_+SINEAluAluSz
CAediting_1317508chr19_17809709_+SINEAluAluSz
CAediting_1317509chr19_17809710_+SINEAluAluSz
CAediting_1317510chr19_17809711_+SINEAluAluSz
CAediting_1317511chr19_17809723_+SINEAluAluSz
CAediting_1317512chr19_17809725_+SINEAluAluSz
CAediting_1317513chr19_17809732_+SINEAluAluSz
CAediting_1317514chr19_17809739_+SINEAluAluSz
CAediting_1317515chr19_17810213_+SINEAluAluSz6
CAediting_1317516chr19_17810217_+SINEAluAluSz6
CAediting_1317517chr19_17810219_+SINEAluAluSz6
CAediting_1317518chr19_17810233_+SINEAluAluSz6
CAediting_1317519chr19_17810235_+SINEAluAluSz6
CAediting_1317520chr19_17810236_+SINEAluAluSz6
CAediting_1317521chr19_17810241_+SINEAluAluSz6
CAediting_1317522chr19_17810258_+SINEAluAluSz6
CAediting_1317523chr19_17810271_+SINEAluAluSz6
CAediting_1317524chr19_17810276_+SINEAluAluSz6
CAediting_1317525chr19_17810278_+SINEAluAluSz6
CAediting_1317526chr19_17810281_+SINEAluAluSz6
CAediting_1317527chr19_17810311_+SINEAluAluSz6
CAediting_1317528chr19_17810312_+SINEAluAluSz6
CAediting_1317529chr19_17810316_+SINEAluAluSz6
CAediting_1317530chr19_17810322_+SINEAluAluSz6
CAediting_1317531chr19_17810330_+SINEAluAluSz6
CAediting_1317532chr19_17810331_+SINEAluAluSz6
CAediting_1317533chr19_17810338_+SINEAluAluSz6
CAediting_1317534chr19_17810344_+SINEAluAluSz6
CAediting_1317535chr19_17810351_+SINEAluAluSz6
CAediting_1317536chr19_17810355_+SINEAluAluSz6
CAediting_1317537chr19_17810359_+SINEAluAluSz6
CAediting_1317538chr19_17810360_+SINEAluAluSz6
CAediting_1317539chr19_17810362_+SINEAluAluSz6
CAediting_1317540chr19_17810370_+SINEAluAluSz6
CAediting_1317541chr19_17810392_+SINEAluAluSz6
CAediting_1317542chr19_17810394_+SINEAluAluSz6
CAediting_1317543chr19_17810604_+SINEAluAluSq
CAediting_1317544chr19_17810618_+SINEAluAluSq
CAediting_1317545chr19_17810620_+SINEAluAluSq
CAediting_1317546chr19_17810626_+SINEAluAluSq
CAediting_1317547chr19_17810627_+SINEAluAluSq
CAediting_1317548chr19_17810632_+SINEAluAluSq
CAediting_1317549chr19_17810635_+SINEAluAluSq
CAediting_1317550chr19_17810643_+SINEAluAluSq
CAediting_1317551chr19_17810649_+SINEAluAluSq
CAediting_1317552chr19_17810653_+SINEAluAluSq
CAediting_1317553chr19_17810662_+SINEAluAluSq
CAediting_1317554chr19_17810672_+SINEAluAluSq
CAediting_1317555chr19_17810680_+SINEAluAluSq
CAediting_1317556chr19_17810681_+SINEAluAluSq
CAediting_1317557chr19_17810683_+SINEAluAluSq
CAediting_1317558chr19_17810706_+SINEAluAluSq
CAediting_1317559chr19_17810717_+SINEAluAluSq
CAediting_1317560chr19_17810720_+SINEAluAluSq
CAediting_1317561chr19_17810721_+SINEAluAluSq
CAediting_1317562chr19_17810724_+SINEAluAluSq
CAediting_1317563chr19_17810734_+SINEAluAluSq
CAediting_1317564chr19_17810738_+SINEAluAluSq
CAediting_1317565chr19_17810752_+SINEAluAluSq
CAediting_1317566chr19_17810760_+SINEAluAluSq
CAediting_1317567chr19_17810766_+SINEAluAluSq
CAediting_1317568chr19_17810777_+SINEAluAluSq
CAediting_1317569chr19_17810787_+SINEAluAluSq
CAediting_1317570chr19_17810789_+SINEAluAluSq
CAediting_1317571chr19_17810790_+SINEAluAluSq
CAediting_1317572chr19_17810801_+SINEAluAluSq
CAediting_1317573chr19_17810802_+SINEAluAluSq
CAediting_1317574chr19_17810807_+SINEAluAluSq
CAediting_1317575chr19_17810808_+SINEAluAluSq
CAediting_1317576chr19_17810809_+SINEAluAluSq
CAediting_1317577chr19_17810822_+SINEAluAluSq
CAediting_1317578chr19_17810826_+SINEAluAluSq
CAediting_1317579chr19_17810831_+SINEAluAluSq
CAediting_1317580chr19_17810833_+SINEAluAluSq
CAediting_1317581chr19_17810838_+SINEAluAluSq
CAediting_1317582chr19_17810841_+SINEAluAluSq
CAediting_1317583chr19_17810872_+SINEAluAluSq
CAediting_1317584chr19_17810930_+SINEAluAluJr
CAediting_1317585chr19_17810953_+SINEAluAluJr
CAediting_1317586chr19_17810954_+SINEAluAluJr
CAediting_1317587chr19_17810994_+SINEAluAluJr
CAediting_1317588chr19_17811008_+SINEAluAluJr
CAediting_1317589chr19_17811027_+SINEAluAluJr
CAediting_1317590chr19_17811030_+SINEAluAluJr
CAediting_1317591chr19_17811031_+SINEAluAluJr
CAediting_1317592chr19_17811038_+SINEAluAluJr
CAediting_1317593chr19_17811063_+SINEAluAluJr
CAediting_1317594chr19_17811093_+SINEAluAluJr
CAediting_1317595chr19_17811103_+SINEAluAluJr
CAediting_1317596chr19_17811116_+SINEAluAluJr
CAediting_1317597chr19_17811123_+SINEAluAluJr
CAediting_1317598chr19_17811129_+SINEAluAluJr
CAediting_1317599chr19_17811134_+SINEAluAluJr
CAediting_1317600chr19_17811169_+SINEAluAluJr
CAediting_1317601chr19_17811177_+SINEAluAluJr

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RNA A-to-I editing events in the alternative splicing sites for B3GNT3

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000179913.9.B3GNT3.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000179913.9.B3GNT3.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for B3GNT3

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for B3GNT3

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for B3GNT3

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for B3GNT3

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for B3GNT3

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
COADCAediting_1317450chr19_17808946_+0.04822081166269720.198070191966185....
STADCAediting_1317451chr19_17808954_+0.01819616952428930.287798495295720.02206108712360540.2793482533293420.0008469921578464160.398170214985331
BLCACAediting_1317454chr19_17808976_+..0.01073939536489810.35433226604458..
BLCACAediting_1317470chr19_17809096_+0.001467403164800970.349848128416363....
STADCAediting_1317470chr19_17809096_+0.03078481280518280.221763934839714....
PAADCAediting_1317470chr19_17809096_+0.02893251104469470.297455657318822....
BLCACAediting_1317474chr19_17809292_+0.003400414767786960.398872075981889....
STADCAediting_1317474chr19_17809292_+..0.02881393316585560.30934768518801..
STADCAediting_1317476chr19_17809319_+0.04156669568715680.249701219707466....
STADCAediting_1317477chr19_17809336_+0.005537237892671810.22471728447679..0.005145392962547640.226594458884688
BLCACAediting_1317497chr19_17809632_+0.02802649988429570.2114621980452390.002221539165318210.291320240290712..
COADCAediting_1317497chr19_17809632_+0.0002118080938292710.330679930006020.01718303665998310.21628970111785..
STADCAediting_1317509chr19_17809710_+0.002353213741471580.3023444246243420.04631942753016660.20075683740311..
STADCAediting_1317510chr19_17809711_+0.000100690839465230.315226917433661..0.02707100788925830.18234365817502
STADCAediting_1317518chr19_17810233_+1.47742330953279e-050.315065519164359....
OVCAediting_1317518chr19_17810233_+....0.019820125741280.3133809949656
BLCACAediting_1317527chr19_17810311_+1.02609892701127e-060.33120633082241....
BRCACAediting_1317527chr19_17810311_+0.002612321455135520.398093848382364....
LUADCAediting_1317527chr19_17810311_+0.0002648827506679880.258408443628619..0.03449855136232060.151499723523228
HNSCCAediting_1317527chr19_17810311_+....0.02407849881015820.256950681597853
UCECCAediting_1317527chr19_17810311_+0.03256854325683170.223069381370274....
PAADCAediting_1317527chr19_17810311_+0.002701735728117930.280874545444641....
READCAediting_1317527chr19_17810311_+....0.04238399712296510.25863536168664
BLCACAediting_1317545chr19_17810620_+0.000392734011819290.315933434242611....
LUADCAediting_1317545chr19_17810620_+0.007506083839414580.339116391256062....
COADCAediting_1317545chr19_17810620_+0.0007323007865887560.3338664621374....
THCACAediting_1317545chr19_17810620_+0.02354659106037370.280645035434609....
PAADCAediting_1317545chr19_17810620_+0.002132018735408340.3770540164925590.009523481100725630.3217572056111..
STADCAediting_1317594chr19_17811093_+..0.01976711526340950.293035412083917..

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Relation with cancer stages for B3GNT3

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BLCApathologic_stageCAediting_1317545chr19_17810620_+0.03929652964502670.186876956496834
COADpathologic_stageCAediting_1317545chr19_17810620_+0.0134870228619890.255384245503566
LUADpathologic_stageCAediting_1317515chr19_17810213_+0.0102585515920657-0.313940680087233
PAADpathologic_stageCAediting_1317454chr19_17808976_+0.0199234097864995-0.328319538137032
STADpathologic_stageCAediting_1317451chr19_17808954_+0.009353722994711650.32003110183966
STADpathologic_stageCAediting_1317497chr19_17809632_+0.007350131416370920.292208784229029

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Relation with survival for B3GNT3

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
COADCAediting_1317454chr19_17808976_+0.003192809869506430.01102241129990

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RelatedDrugs for B3GNT3

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for B3GNT3

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource