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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: TNIP1 (CAeditome ID:10318)

Gene summary for TNIP1

check button Gene summary
Gene informationGene symbol

TNIP1

Gene ID

10318

Gene nameTNFAIP3 interacting protein 1
SynonymsABIN-1|NAF1|VAN|nip40-1
Cytomap

5q33.1

Type of geneprotein-coding
DescriptionTNFAIP3-interacting protein 1A20-binding inhibitor of NF-kappa-B activation 1HIV-1 Nef-interacting proteinNef-associated factor 1 SNPvirion-associated nuclear shuttling protein
Modification date20210524
UniProtAcc

Q15025

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
TNIP1

GO:0051019

TNFAIP3-interacting protein 1

12220502

TNIP1

GO:0009101

TNFAIP3-interacting protein 1

9923610

TNIP1

GO:0043124

TNFAIP3-interacting protein 1

16684768

TNIP1

GO:0070373

TNFAIP3-interacting protein 1

12220502

TNIP1

GO:0085032

TNFAIP3-interacting protein 1

20010814

TNIP1

GO:1903003

TNFAIP3-interacting protein 1

16684768

TNIP1

GO:0005654

TNFAIP3-interacting protein 1

0000052

TNIP1

GO:0005829

TNFAIP3-interacting protein 1

0000052


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RNA A-to-I events for TNIP1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000145901.13

check button RNA A-to-I editing events in Cancer.
CAediting_441719(151033014, -), CAediting_441720(151043512, -), CAediting_441721(151043532, -), CAediting_441722(151043545, -), CAediting_441723(151043553, -), CAediting_441724(151043554, -), CAediting_441725(151043557, -), CAediting_441726(151043558, -), CAediting_441727(151043583, -), CAediting_441728(151043590, -), CAediting_441729(151043592, -), CAediting_441730(151043607, -), CAediting_441731(151043626, -), CAediting_441732(151043627, -), CAediting_441733(151043653, -), CAediting_441734(151043656, -), CAediting_441735(151043658, -), CAediting_441736(151043663, -), CAediting_441737(151043675, -), CAediting_441738(151043693, -), CAediting_441739(151043706, -), CAediting_441740(151043713, -), CAediting_441741(151043728, -), CAediting_441742(151043737, -), CAediting_441743(151043744, -), CAediting_441744(151043762, -), CAediting_441745(151043770, -), CAediting_441746(151043774, -), CAediting_441747(151043775, -), CAediting_441748(151044093, -), CAediting_441749(151044111, -), CAediting_441750(151044174, -), CAediting_441751(151044184, -), CAediting_441752(151044192, -), CAediting_441753(151044197, -), CAediting_441754(151044237, -), CAediting_441755(151044238, -), CAediting_441756(151044241, -), CAediting_441757(151044243, -), CAediting_441758(151044284, -), CAediting_441759(151044314, -), CAediting_441760(151044337, -), CAediting_441761(151045122, -), CAediting_441762(151045127, -), CAediting_441763(151045129, -), CAediting_441764(151045159, -), CAediting_441765(151045175, -), CAediting_441766(151045188, -), CAediting_441767(151045227, -), CAediting_441768(151045236, -), CAediting_441769(151045253, -), CAediting_441770(151045261, -), CAediting_441771(151045263, -), CAediting_441772(151045268, -), CAediting_441773(151045272, -), CAediting_441774(151045283, -), CAediting_441775(151045291, -), CAediting_441776(151045302, -), CAediting_441777(151045327, -), CAediting_441778(151045357, -), CAediting_441779(151045362, -), CAediting_441780(151053172, -), CAediting_441781(151053177, -), CAediting_441782(151053186, -), CAediting_441783(151053206, -), CAediting_441784(151053234, -), CAediting_441785(151053242, -), CAediting_441786(151053248, -), CAediting_441787(151053258, -), CAediting_441788(151053270, -), CAediting_441789(151053274, -), CAediting_441790(151053283, -), CAediting_441791(151053285, -), CAediting_441792(151053286, -), CAediting_441793(151053287, -), CAediting_441794(151053292, -), CAediting_441795(151053313, -), CAediting_441796(151053374, -), CAediting_441797(151053382, -), CAediting_441798(151053383, -), CAediting_441799(151053405, -), CAediting_441800(151054424, -), CAediting_441801(151054436, -), CAediting_441802(151054464, -), CAediting_441803(151054524, -), CAediting_441804(151054555, -), CAediting_441805(151054561, -), CAediting_441806(151054566, -), CAediting_441807(151054573, -), CAediting_441808(151054574, -), CAediting_441809(151054588, -), CAediting_441810(151054627, -), CAediting_441811(151054629, -), CAediting_441812(151054919, -), CAediting_441813(151057467, -), CAediting_441814(151057551, -), CAediting_441815(151057617, -), CAediting_441816(151058058, -), CAediting_441817(151058085, -), CAediting_441818(151058088, -), CAediting_441819(151058094, -), CAediting_441820(151058098, -), CAediting_441821(151058193, -), CAediting_441822(151058194, -), CAediting_441823(151058216, -), CAediting_441824(151061724, -), CAediting_441825(151061742, -), CAediting_441826(151061753, -), CAediting_441827(151074894, -), CAediting_441828(151092315, -), CAediting_441829(151092319, -), CAediting_441830(151092321, -), CAediting_441831(151092333, -), CAediting_441832(151092335, -), CAediting_441833(151092388, -), CAediting_441834(151092410, -), CAediting_441835(151092413, -), CAediting_441836(151092478, -),

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RNA editing positional annotations for TNIP1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_441719chr5_151033014_-ncRNA_intronic
CAediting_441720chr5_151043512_-ncRNA_intronic
CAediting_441721chr5_151043532_-ncRNA_intronic
CAediting_441722chr5_151043545_-ncRNA_intronic
CAediting_441723chr5_151043553_-ncRNA_intronic
CAediting_441724chr5_151043554_-ncRNA_intronic
CAediting_441725chr5_151043557_-ncRNA_intronic
CAediting_441726chr5_151043558_-ncRNA_intronic
CAediting_441727chr5_151043583_-ncRNA_intronic
CAediting_441728chr5_151043590_-ncRNA_intronic
CAediting_441729chr5_151043592_-ncRNA_intronic
CAediting_441730chr5_151043607_-ncRNA_intronic
CAediting_441731chr5_151043626_-ncRNA_intronic
CAediting_441732chr5_151043627_-ncRNA_intronic
CAediting_441733chr5_151043653_-ncRNA_intronic
CAediting_441734chr5_151043656_-ncRNA_intronic
CAediting_441735chr5_151043658_-ncRNA_intronic
CAediting_441736chr5_151043663_-ncRNA_intronic
CAediting_441737chr5_151043675_-ncRNA_intronic
CAediting_441738chr5_151043693_-ncRNA_intronic
CAediting_441739chr5_151043706_-ncRNA_intronic
CAediting_441740chr5_151043713_-ncRNA_intronic
CAediting_441741chr5_151043728_-ncRNA_intronic
CAediting_441742chr5_151043737_-ncRNA_intronic
CAediting_441743chr5_151043744_-ncRNA_intronic
CAediting_441744chr5_151043762_-ncRNA_intronic
CAediting_441745chr5_151043770_-ncRNA_intronic
CAediting_441746chr5_151043774_-ncRNA_intronic
CAediting_441747chr5_151043775_-ncRNA_intronic
CAediting_441748chr5_151044093_-ncRNA_intronic
CAediting_441749chr5_151044111_-ncRNA_intronic
CAediting_441750chr5_151044174_-ncRNA_intronic
CAediting_441751chr5_151044184_-ncRNA_intronic
CAediting_441752chr5_151044192_-ncRNA_intronic
CAediting_441753chr5_151044197_-ncRNA_intronic
CAediting_441754chr5_151044237_-ncRNA_intronic
CAediting_441755chr5_151044238_-ncRNA_intronic
CAediting_441756chr5_151044241_-ncRNA_intronic
CAediting_441757chr5_151044243_-ncRNA_intronic
CAediting_441758chr5_151044284_-ncRNA_intronic
CAediting_441759chr5_151044314_-ncRNA_intronic
CAediting_441760chr5_151044337_-ncRNA_intronic
CAediting_441761chr5_151045122_-ncRNA_intronic
CAediting_441762chr5_151045127_-ncRNA_intronic
CAediting_441763chr5_151045129_-ncRNA_intronic
CAediting_441764chr5_151045159_-ncRNA_intronic
CAediting_441765chr5_151045175_-ncRNA_intronic
CAediting_441766chr5_151045188_-ncRNA_intronic
CAediting_441767chr5_151045227_-ncRNA_intronic
CAediting_441768chr5_151045236_-ncRNA_intronic
CAediting_441769chr5_151045253_-ncRNA_intronic
CAediting_441770chr5_151045261_-ncRNA_intronic
CAediting_441771chr5_151045263_-ncRNA_intronic
CAediting_441772chr5_151045268_-ncRNA_intronic
CAediting_441773chr5_151045272_-ncRNA_intronic
CAediting_441774chr5_151045283_-ncRNA_intronic
CAediting_441775chr5_151045291_-ncRNA_intronic
CAediting_441776chr5_151045302_-ncRNA_intronic
CAediting_441777chr5_151045327_-ncRNA_intronic
CAediting_441778chr5_151045357_-ncRNA_intronic
CAediting_441779chr5_151045362_-ncRNA_intronic
CAediting_441780chr5_151053172_-intronic
CAediting_441781chr5_151053177_-intronic
CAediting_441782chr5_151053186_-intronic
CAediting_441783chr5_151053206_-intronic
CAediting_441784chr5_151053234_-intronic
CAediting_441785chr5_151053242_-intronic
CAediting_441786chr5_151053248_-intronic
CAediting_441787chr5_151053258_-intronic
CAediting_441788chr5_151053270_-intronic
CAediting_441789chr5_151053274_-intronic
CAediting_441790chr5_151053283_-intronic
CAediting_441791chr5_151053285_-intronic
CAediting_441792chr5_151053286_-intronic
CAediting_441793chr5_151053287_-intronic
CAediting_441794chr5_151053292_-intronic
CAediting_441795chr5_151053313_-intronic
CAediting_441796chr5_151053374_-intronic
CAediting_441797chr5_151053382_-intronic
CAediting_441798chr5_151053383_-intronic
CAediting_441799chr5_151053405_-intronic
CAediting_441800chr5_151054424_-intronic
CAediting_441801chr5_151054436_-intronic
CAediting_441802chr5_151054464_-intronic
CAediting_441803chr5_151054524_-intronic
CAediting_441804chr5_151054555_-intronic
CAediting_441805chr5_151054561_-intronic
CAediting_441806chr5_151054566_-intronic
CAediting_441807chr5_151054573_-intronic
CAediting_441808chr5_151054574_-intronic
CAediting_441809chr5_151054588_-intronic
CAediting_441810chr5_151054627_-intronic
CAediting_441811chr5_151054629_-intronic
CAediting_441812chr5_151054919_-intronic
CAediting_441813chr5_151057467_-intronic
CAediting_441814chr5_151057551_-intronic
CAediting_441815chr5_151057617_-intronic
CAediting_441816chr5_151058058_-intronic
CAediting_441817chr5_151058085_-intronic
CAediting_441818chr5_151058088_-intronic
CAediting_441819chr5_151058094_-intronic
CAediting_441820chr5_151058098_-intronic
CAediting_441821chr5_151058193_-intronic
CAediting_441822chr5_151058194_-intronic
CAediting_441823chr5_151058216_-intronic
CAediting_441824chr5_151061724_-intronic
CAediting_441825chr5_151061742_-intronic
CAediting_441826chr5_151061753_-intronic
CAediting_441827chr5_151074894_-intronic
CAediting_441828chr5_151092315_-intronic
CAediting_441829chr5_151092319_-intronic
CAediting_441830chr5_151092321_-intronic
CAediting_441831chr5_151092333_-intronic
CAediting_441832chr5_151092335_-intronic
CAediting_441833chr5_151092388_-intronic
CAediting_441834chr5_151092410_-intronic
CAediting_441835chr5_151092413_-intronic
CAediting_441836chr5_151092478_-intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_441719chr5_151033014_-SINEAluAluSq
CAediting_441720chr5_151043512_-SINEAluAluJb
CAediting_441721chr5_151043532_-SINEAluAluJb
CAediting_441722chr5_151043545_-SINEAluAluJb
CAediting_441723chr5_151043553_-SINEAluAluJb
CAediting_441724chr5_151043554_-SINEAluAluJb
CAediting_441725chr5_151043557_-SINEAluAluJb
CAediting_441726chr5_151043558_-SINEAluAluJb
CAediting_441727chr5_151043583_-SINEAluAluJb
CAediting_441728chr5_151043590_-SINEAluAluJb
CAediting_441729chr5_151043592_-SINEAluAluJb
CAediting_441730chr5_151043607_-SINEAluAluJb
CAediting_441731chr5_151043626_-SINEAluAluJb
CAediting_441732chr5_151043627_-SINEAluAluJb
CAediting_441733chr5_151043653_-SINEAluAluJb
CAediting_441734chr5_151043656_-SINEAluAluJb
CAediting_441735chr5_151043658_-SINEAluAluJb
CAediting_441736chr5_151043663_-SINEAluAluJb
CAediting_441737chr5_151043675_-SINEAluAluJb
CAediting_441738chr5_151043693_-SINEAluAluJb
CAediting_441739chr5_151043706_-SINEAluAluJb
CAediting_441740chr5_151043713_-SINEAluAluJb
CAediting_441741chr5_151043728_-SINEAluAluJb
CAediting_441742chr5_151043737_-SINEAluAluJb
CAediting_441743chr5_151043744_-SINEAluAluJb
CAediting_441744chr5_151043762_-SINEAluAluJb
CAediting_441745chr5_151043770_-SINEAluAluJb
CAediting_441746chr5_151043774_-SINEAluAluJb
CAediting_441747chr5_151043775_-SINEAluAluJb
CAediting_441748chr5_151044093_-SINEAluAluJr
CAediting_441749chr5_151044111_-SINEAluAluJr
CAediting_441750chr5_151044174_-SINEAluAluJr
CAediting_441751chr5_151044184_-SINEAluAluJr
CAediting_441752chr5_151044192_-SINEAluAluJr
CAediting_441753chr5_151044197_-SINEAluAluJr
CAediting_441754chr5_151044237_-SINEAluAluJr
CAediting_441755chr5_151044238_-SINEAluAluJr
CAediting_441756chr5_151044241_-SINEAluAluJr
CAediting_441757chr5_151044243_-SINEAluAluJr
CAediting_441758chr5_151044284_-SINEAluAluJr
CAediting_441759chr5_151044314_-SINEAluAluJr
CAediting_441760chr5_151044337_-SINEAluAluJr
CAediting_441761chr5_151045122_-SINEAluAluSx
CAediting_441762chr5_151045127_-SINEAluAluSx
CAediting_441763chr5_151045129_-SINEAluAluSx
CAediting_441764chr5_151045159_-SINEAluAluSx
CAediting_441765chr5_151045175_-SINEAluAluSx
CAediting_441766chr5_151045188_-SINEAluAluSx
CAediting_441767chr5_151045227_-SINEAluAluSx
CAediting_441768chr5_151045236_-SINEAluAluSx
CAediting_441769chr5_151045253_-SINEAluAluSx
CAediting_441770chr5_151045261_-SINEAluAluSx
CAediting_441771chr5_151045263_-SINEAluAluSx
CAediting_441772chr5_151045268_-SINEAluAluSx
CAediting_441773chr5_151045272_-SINEAluAluSx
CAediting_441774chr5_151045283_-SINEAluAluSx
CAediting_441775chr5_151045291_-SINEAluAluSx
CAediting_441776chr5_151045302_-SINEAluAluSx
CAediting_441777chr5_151045327_-SINEAluAluSx
CAediting_441778chr5_151045357_-SINEAluAluSx
CAediting_441779chr5_151045362_-SINEAluAluSx
CAediting_441780chr5_151053172_-SINEAluAluSz
CAediting_441781chr5_151053177_-SINEAluAluSz
CAediting_441782chr5_151053186_-SINEAluAluSz
CAediting_441783chr5_151053206_-SINEAluAluSz
CAediting_441784chr5_151053234_-SINEAluAluSz
CAediting_441785chr5_151053242_-SINEAluAluSz
CAediting_441786chr5_151053248_-SINEAluAluSz
CAediting_441787chr5_151053258_-SINEAluAluSz
CAediting_441788chr5_151053270_-SINEAluAluSz
CAediting_441789chr5_151053274_-SINEAluAluSz
CAediting_441790chr5_151053283_-SINEAluAluSz
CAediting_441791chr5_151053285_-SINEAluAluSz
CAediting_441792chr5_151053286_-SINEAluAluSz
CAediting_441793chr5_151053287_-SINEAluAluSz
CAediting_441794chr5_151053292_-SINEAluAluSz
CAediting_441795chr5_151053313_-SINEAluAluSz
CAediting_441796chr5_151053374_-SINEAluAluSz
CAediting_441797chr5_151053382_-SINEAluAluSz
CAediting_441798chr5_151053383_-SINEAluAluSz
CAediting_441799chr5_151053405_-SINEAluAluSz
CAediting_441800chr5_151054424_-SINEAluAluJb
CAediting_441801chr5_151054436_-SINEAluAluJb
CAediting_441802chr5_151054464_-SINEAluAluJb
CAediting_441803chr5_151054524_-SINEAluAluJb
CAediting_441804chr5_151054555_-SINEAluAluJb
CAediting_441805chr5_151054561_-SINEAluAluJb
CAediting_441806chr5_151054566_-SINEAluAluJb
CAediting_441807chr5_151054573_-SINEAluAluJb
CAediting_441808chr5_151054574_-SINEAluAluJb
CAediting_441809chr5_151054588_-SINEAluAluJb
CAediting_441810chr5_151054627_-SINEAluAluJb
CAediting_441811chr5_151054629_-SINEAluAluJb
CAediting_441813chr5_151057467_-SINEAluAluSc5
CAediting_441814chr5_151057551_-SINEAluAluSc5
CAediting_441815chr5_151057617_-SINEAluAluSc5
CAediting_441816chr5_151058058_-SINEAluAluSx
CAediting_441817chr5_151058085_-SINEAluAluSx
CAediting_441818chr5_151058088_-SINEAluAluSx
CAediting_441819chr5_151058094_-SINEAluAluSx
CAediting_441820chr5_151058098_-SINEAluAluSx
CAediting_441821chr5_151058193_-SINEAluAluSx
CAediting_441822chr5_151058194_-SINEAluAluSx
CAediting_441823chr5_151058216_-SINEAluAluSx
CAediting_441824chr5_151061724_-SINEAluAluJo
CAediting_441825chr5_151061742_-SINEAluAluJo
CAediting_441826chr5_151061753_-SINEAluAluJo
CAediting_441827chr5_151074894_-SINEAluAluJb
CAediting_441828chr5_151092315_-SINEAluAluY
CAediting_441829chr5_151092319_-SINEAluAluY
CAediting_441830chr5_151092321_-SINEAluAluY
CAediting_441831chr5_151092333_-SINEAluAluY
CAediting_441832chr5_151092335_-SINEAluAluY
CAediting_441833chr5_151092388_-SINEAluAluY
CAediting_441834chr5_151092410_-SINEAluAluY
CAediting_441835chr5_151092413_-SINEAluAluY
CAediting_441836chr5_151092478_-SINEAluAluY

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RNA A-to-I editing events in the alternative splicing sites for TNIP1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000145901.13.TNIP1.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000145901.13.TNIP1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TNIP1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
KIRC.CAediting_441743.ENSG00000145901.TNIP1.png
Soverview
KIRC.CAediting_441753.ENSG00000145901.TNIP1.png
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Protein coding region RNA A-to-I editings for TNIP1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for TNIP1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000145901.13ENST00000519339hsa-miR-624-3p1510323571510323637mer-m8151032356151032376145-18.68
CAediting_1229413chr17_67471544_+ENSG00000145901.13ENST00000520931hsa-miR-548aa1510303431510303508mer-1a151030343151030367145-13.47
CAediting_86358chr1_109598906_+ENSG00000145901.13ENST00000520931hsa-miR-197-5p1510305261510305338mer-1a151030526151030548145-21.11
CAediting_1229413chr17_67471544_+ENSG00000145901.13ENST00000389378hsa-miR-548aa1510303431510303508mer-1a151030343151030367145-13.47
CAediting_1306323chr19_13836462_-ENSG00000145901.13ENST00000389378hsa-miR-27a-3p1510307261510307327mer-m8151030725151030745140-14.03
CAediting_86358chr1_109598906_+ENSG00000145901.13ENST00000389378hsa-miR-197-5p1510305261510305338mer-1a151030526151030548145-21.11
CAediting_573001chr7_92204086_-ENSG00000145901.13ENST00000389378hsa-miR-1285-5p1510307101510307167mer-m8151030709151030727151-24.56
CAediting_1229413chr17_67471544_+ENSG00000145901.13ENST00000610874hsa-miR-548aa1510303431510303508mer-1a151030343151030367145-13.47
CAediting_86358chr1_109598906_+ENSG00000145901.13ENST00000610874hsa-miR-197-5p1510305261510305338mer-1a151030526151030548145-21.11
CAediting_1229413chr17_67471544_+ENSG00000145901.13ENST00000315050hsa-miR-548aa1510303431510303508mer-1a151030343151030367145-13.47
CAediting_86358chr1_109598906_+ENSG00000145901.13ENST00000315050hsa-miR-197-5p1510305261510305338mer-1a151030526151030548145-21.11
CAediting_1229413chr17_67471544_+ENSG00000145901.13ENST00000523338hsa-miR-548aa1510303431510303508mer-1a151030343151030367145-13.47
CAediting_86358chr1_109598906_+ENSG00000145901.13ENST00000523338hsa-miR-197-5p1510305261510305338mer-1a151030526151030548145-21.11
CAediting_86358chr1_109598906_+ENSG00000145901.13ENST00000522226hsa-miR-197-5p1510305261510305338mer-1a151030526151030548145-21.11
CAediting_1306323chr19_13836462_-ENSG00000145901.13ENST00000519339hsa-miR-27a-3p1510307261510307327mer-m8151030725151030745140-14.03
CAediting_573001chr7_92204086_-ENSG00000145901.13ENST00000519339hsa-miR-1285-5p1510307101510307167mer-m8151030709151030727151-24.56

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1054808chr15_66496985_-ENSG00000145901.13ENST00000520931hsa-miR-45121510303371510303437mer-m8151030336151030357144-19.76
CAediting_1054808chr15_66496985_-ENSG00000145901.13ENST00000520931hsa-miR-45121510300721510300787mer-m8151030071151030092150-20.41
CAediting_1524209chrX_134546392_-ENSG00000145901.13ENST00000520931hsa-miR-503-5p1510304681510304736mer151030467151030491147-22.32
CAediting_1054808chr15_66496985_-ENSG00000145901.13ENST00000389378hsa-miR-45121510303371510303437mer-m8151030336151030357144-19.76
CAediting_1054808chr15_66496985_-ENSG00000145901.13ENST00000389378hsa-miR-45121510300721510300787mer-m8151030071151030092150-20.41
CAediting_1524209chrX_134546392_-ENSG00000145901.13ENST00000389378hsa-miR-503-5p1510304681510304736mer151030467151030491147-22.32
CAediting_1054808chr15_66496985_-ENSG00000145901.13ENST00000610874hsa-miR-45121510303371510303437mer-m8151030336151030357144-19.76
CAediting_1054808chr15_66496985_-ENSG00000145901.13ENST00000610874hsa-miR-45121510300721510300787mer-m8151030071151030092150-20.41
CAediting_1524209chrX_134546392_-ENSG00000145901.13ENST00000610874hsa-miR-503-5p1510304681510304736mer151030467151030491147-22.32
CAediting_1054808chr15_66496985_-ENSG00000145901.13ENST00000315050hsa-miR-45121510303371510303437mer-m8151030336151030357144-19.76
CAediting_1054808chr15_66496985_-ENSG00000145901.13ENST00000315050hsa-miR-45121510300721510300787mer-m8151030071151030092150-20.41
CAediting_1524209chrX_134546392_-ENSG00000145901.13ENST00000315050hsa-miR-503-5p1510304681510304736mer151030467151030491147-22.32
CAediting_1054808chr15_66496985_-ENSG00000145901.13ENST00000523338hsa-miR-45121510303371510303437mer-m8151030336151030357144-19.76
CAediting_1054808chr15_66496985_-ENSG00000145901.13ENST00000523338hsa-miR-45121510300721510300787mer-m8151030071151030092150-20.41
CAediting_1524209chrX_134546392_-ENSG00000145901.13ENST00000523338hsa-miR-503-5p1510304681510304736mer151030467151030491147-22.32

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TNIP1

check button - RNA A-to-I editing in mRNA.
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ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for TNIP1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for TNIP1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for TNIP1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for TNIP1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for TNIP1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
TNIP1C0024141Lupus Erythematosus, Systemic7CTD_human;ORPHANET
TNIP1C0030246Pustulosis of Palms and Soles2CTD_human
TNIP1C0033860Psoriasis2CTD_human
TNIP1C0242380Libman-Sacks Disease2CTD_human
TNIP1C0004096Asthma1CTD_human
TNIP1C0006142Malignant neoplasm of breast1CTD_human
TNIP1C0036421Systemic Scleroderma1CTD_human
TNIP1C0086981Sicca Syndrome1CTD_human
TNIP1C0678222Breast Carcinoma1CTD_human
TNIP1C1257931Mammary Neoplasms, Human1CTD_human
TNIP1C1458155Mammary Neoplasms1CTD_human
TNIP1C1527336Sjogren's Syndrome1CTD_human
TNIP1C4704874Mammary Carcinoma, Human1CTD_human