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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: STAM2 (CAeditome ID:10254)

Gene summary for STAM2

check button Gene summary
Gene informationGene symbol

STAM2

Gene ID

10254

Gene namesignal transducing adaptor molecule 2
SynonymsHbp|STAM2A|STAM2B
Cytomap

2q23.3

Type of geneprotein-coding
Descriptionsignal transducing adapter molecule 2HSE1 homologHrs-binding proteinSTAM-2STAM-like protein containing SH3 and ITAM domains 2signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
Modification date20210518
UniProtAcc

O75886

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
STAM2

GO:0005654

Signal transducing adapter molecule 2

0000052

STAM2

GO:0005737

Signal transducing adapter molecule 2

0000054

STAM2

GO:0005829

Signal transducing adapter molecule 2

0000052

STAM2

GO:0043231

Signal transducing adapter molecule 2

0000052


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RNA A-to-I events for STAM2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000115145.8
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_218435(152117213, -), CAediting_218436(152117300, -), CAediting_218437(152117311, -), CAediting_218438(152117320, -), CAediting_218439(152117338, -), CAediting_218440(152117342, -), CAediting_218441(152117356, -), CAediting_218442(152117383, -), CAediting_218443(152117402, -), CAediting_218444(152117405, -), CAediting_218445(152117431, -), CAediting_218446(152117432, -), CAediting_218447(152117454, -), CAediting_218448(152120204, -), CAediting_218449(152120210, -), CAediting_218450(152120213, -), CAediting_218451(152120235, -), CAediting_218452(152121170, -), CAediting_218453(152122384, -), CAediting_218454(152123940, -), CAediting_218455(152129423, -), CAediting_218456(152130324, -), CAediting_218457(152130380, -), CAediting_218458(152130390, -), CAediting_218459(152130809, -), CAediting_218460(152136271, -), CAediting_218461(152136343, -), CAediting_218462(152136433, -), CAediting_218463(152136962, -), CAediting_218464(152136963, -), CAediting_218465(152136967, -), CAediting_218466(152136980, -), CAediting_218467(152136992, -), CAediting_218468(152137000, -), CAediting_218469(152137006, -), CAediting_218470(152137008, -), CAediting_218471(152137023, -), CAediting_218472(152137033, -), CAediting_218473(152137041, -), CAediting_218474(152137078, -), CAediting_218475(152137083, -), CAediting_218476(152137085, -), CAediting_218477(152137086, -), CAediting_218478(152137088, -), CAediting_218479(152137103, -), CAediting_218480(152137134, -), CAediting_218481(152137152, -), CAediting_218482(152137167, -), CAediting_218483(152141291, -), CAediting_218484(152141390, -), CAediting_218485(152141399, -), CAediting_218486(152141406, -), CAediting_218487(152141482, -), CAediting_218488(152141487, -), CAediting_218489(152141515, -), CAediting_218490(152146025, -), CAediting_218491(152148467, -), CAediting_218492(152149604, -), CAediting_218493(152149605, -), CAediting_218494(152149609, -), CAediting_218495(152149613, -), CAediting_218496(152150582, -), CAediting_218497(152150616, -), CAediting_218498(152150737, -), CAediting_218499(152150744, -), CAediting_218500(152150807, -), CAediting_218501(152151306, -), CAediting_218502(152151330, -), CAediting_218503(152151457, -), CAediting_218504(152152117, -), CAediting_218505(152152118, -), CAediting_218506(152157663, -), CAediting_218507(152159254, -), CAediting_218508(152161890, -), CAediting_218509(152161891, -), CAediting_218510(152161915, -), CAediting_218511(152161919, -), CAediting_218512(152161920, -), CAediting_218513(152161955, -), CAediting_218514(152161960, -), CAediting_218515(152161961, -), CAediting_218516(152162104, -), CAediting_218517(152162321, -), CAediting_218518(152162327, -), CAediting_218519(152162354, -), CAediting_218520(152162464, -), CAediting_218521(152162468, -), CAediting_218522(152162527, -), CAediting_218523(152162535, -), CAediting_218524(152162541, -), CAediting_218525(152162543, -), CAediting_218526(152162710, -), CAediting_218527(152162774, -), CAediting_218528(152164410, -), CAediting_218529(152164466, -), CAediting_218530(152165258, -), CAediting_218531(152165938, -), CAediting_218532(152165982, -), CAediting_218533(152166098, -), CAediting_218534(152166117, -), CAediting_218535(152166140, -), CAediting_218536(152168324, -), CAediting_218537(152169405, -), CAediting_218538(152169415, -), CAediting_218539(152169441, -), CAediting_218540(152169450, -), CAediting_218541(152169892, -), CAediting_218542(152169935, -), CAediting_218543(152169946, -), CAediting_218544(152169953, -), CAediting_218545(152170002, -), CAediting_218546(152170011, -), CAediting_218547(152170909, -), CAediting_218548(152172807, -),

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RNA editing positional annotations for STAM2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_218435chr2_152117213_-UTR3
CAediting_218436chr2_152117300_-UTR3
CAediting_218437chr2_152117311_-UTR3
CAediting_218438chr2_152117320_-UTR3
CAediting_218439chr2_152117338_-UTR3
CAediting_218440chr2_152117342_-UTR3
CAediting_218441chr2_152117356_-UTR3
CAediting_218442chr2_152117383_-UTR3
CAediting_218443chr2_152117402_-UTR3
CAediting_218444chr2_152117405_-UTR3
CAediting_218445chr2_152117431_-UTR3
CAediting_218446chr2_152117432_-UTR3
CAediting_218447chr2_152117454_-UTR3
CAediting_218448chr2_152120204_-UTR3
CAediting_218449chr2_152120210_-UTR3
CAediting_218450chr2_152120213_-UTR3
CAediting_218451chr2_152120235_-UTR3
CAediting_218452chr2_152121170_-ncRNA_intronic
CAediting_218453chr2_152122384_-ncRNA_intronic
CAediting_218454chr2_152123940_-ncRNA_exonic
CAediting_218455chr2_152129423_-ncRNA_intronic
CAediting_218456chr2_152130324_-ncRNA_intronic
CAediting_218457chr2_152130380_-ncRNA_intronic
CAediting_218458chr2_152130390_-ncRNA_intronic
CAediting_218459chr2_152130809_-ncRNA_intronic
CAediting_218460chr2_152136271_-ncRNA_intronic
CAediting_218461chr2_152136343_-ncRNA_intronic
CAediting_218462chr2_152136433_-ncRNA_intronic
CAediting_218463chr2_152136962_-ncRNA_intronic
CAediting_218464chr2_152136963_-ncRNA_intronic
CAediting_218465chr2_152136967_-ncRNA_intronic
CAediting_218466chr2_152136980_-ncRNA_intronic
CAediting_218467chr2_152136992_-ncRNA_intronic
CAediting_218468chr2_152137000_-ncRNA_intronic
CAediting_218469chr2_152137006_-ncRNA_intronic
CAediting_218470chr2_152137008_-ncRNA_intronic
CAediting_218471chr2_152137023_-ncRNA_intronic
CAediting_218472chr2_152137033_-ncRNA_intronic
CAediting_218473chr2_152137041_-ncRNA_intronic
CAediting_218474chr2_152137078_-ncRNA_intronic
CAediting_218475chr2_152137083_-ncRNA_intronic
CAediting_218476chr2_152137085_-ncRNA_intronic
CAediting_218477chr2_152137086_-ncRNA_intronic
CAediting_218478chr2_152137088_-ncRNA_intronic
CAediting_218479chr2_152137103_-ncRNA_intronic
CAediting_218480chr2_152137134_-ncRNA_intronic
CAediting_218481chr2_152137152_-ncRNA_intronic
CAediting_218482chr2_152137167_-ncRNA_intronic
CAediting_218483chr2_152141291_-ncRNA_intronic
CAediting_218484chr2_152141390_-ncRNA_intronic
CAediting_218485chr2_152141399_-ncRNA_intronic
CAediting_218486chr2_152141406_-ncRNA_intronic
CAediting_218487chr2_152141482_-ncRNA_intronic
CAediting_218488chr2_152141487_-ncRNA_intronic
CAediting_218489chr2_152141515_-ncRNA_intronic
CAediting_218490chr2_152146025_-ncRNA_intronic
CAediting_218491chr2_152148467_-ncRNA_intronic
CAediting_218492chr2_152149604_-ncRNA_intronic
CAediting_218493chr2_152149605_-ncRNA_intronic
CAediting_218494chr2_152149609_-ncRNA_intronic
CAediting_218495chr2_152149613_-ncRNA_intronic
CAediting_218496chr2_152150582_-ncRNA_intronic
CAediting_218497chr2_152150616_-ncRNA_intronic
CAediting_218498chr2_152150737_-ncRNA_intronic
CAediting_218499chr2_152150744_-ncRNA_intronic
CAediting_218500chr2_152150807_-ncRNA_intronic
CAediting_218501chr2_152151306_-ncRNA_intronic
CAediting_218502chr2_152151330_-ncRNA_intronic
CAediting_218503chr2_152151457_-ncRNA_intronic
CAediting_218504chr2_152152117_-ncRNA_intronic
CAediting_218505chr2_152152118_-ncRNA_intronic
CAediting_218506chr2_152157663_-ncRNA_intronic
CAediting_218507chr2_152159254_-ncRNA_intronic
CAediting_218508chr2_152161890_-ncRNA_intronic
CAediting_218509chr2_152161891_-ncRNA_intronic
CAediting_218510chr2_152161915_-ncRNA_intronic
CAediting_218511chr2_152161919_-ncRNA_intronic
CAediting_218512chr2_152161920_-ncRNA_intronic
CAediting_218513chr2_152161955_-ncRNA_intronic
CAediting_218514chr2_152161960_-ncRNA_intronic
CAediting_218515chr2_152161961_-ncRNA_intronic
CAediting_218516chr2_152162104_-ncRNA_intronic
CAediting_218517chr2_152162321_-ncRNA_intronic
CAediting_218518chr2_152162327_-ncRNA_intronic
CAediting_218519chr2_152162354_-ncRNA_intronic
CAediting_218520chr2_152162464_-ncRNA_intronic
CAediting_218521chr2_152162468_-ncRNA_intronic
CAediting_218522chr2_152162527_-ncRNA_intronic
CAediting_218523chr2_152162535_-ncRNA_intronic
CAediting_218524chr2_152162541_-ncRNA_intronic
CAediting_218525chr2_152162543_-ncRNA_intronic
CAediting_218526chr2_152162710_-ncRNA_intronic
CAediting_218527chr2_152162774_-ncRNA_intronic
CAediting_218528chr2_152164410_-ncRNA_intronic
CAediting_218529chr2_152164466_-ncRNA_intronic
CAediting_218530chr2_152165258_-ncRNA_intronic
CAediting_218531chr2_152165938_-ncRNA_intronic
CAediting_218532chr2_152165982_-ncRNA_intronic
CAediting_218533chr2_152166098_-ncRNA_intronic
CAediting_218534chr2_152166117_-ncRNA_intronic
CAediting_218535chr2_152166140_-ncRNA_intronic
CAediting_218536chr2_152168324_-ncRNA_intronic
CAediting_218537chr2_152169405_-ncRNA_intronic
CAediting_218538chr2_152169415_-ncRNA_intronic
CAediting_218539chr2_152169441_-ncRNA_intronic
CAediting_218540chr2_152169450_-ncRNA_intronic
CAediting_218541chr2_152169892_-ncRNA_intronic
CAediting_218542chr2_152169935_-ncRNA_intronic
CAediting_218543chr2_152169946_-ncRNA_intronic
CAediting_218544chr2_152169953_-ncRNA_intronic
CAediting_218545chr2_152170002_-ncRNA_intronic
CAediting_218546chr2_152170011_-ncRNA_intronic
CAediting_218547chr2_152170909_-ncRNA_intronic
CAediting_218548chr2_152172807_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_218435chr2_152117213_-SINEAluAluJr
CAediting_218436chr2_152117300_-SINEAluAluJr
CAediting_218437chr2_152117311_-SINEAluAluJr
CAediting_218438chr2_152117320_-SINEAluAluJr
CAediting_218439chr2_152117338_-SINEAluAluJr
CAediting_218440chr2_152117342_-SINEAluAluJr
CAediting_218441chr2_152117356_-SINEAluAluJr
CAediting_218442chr2_152117383_-SINEAluAluJr
CAediting_218443chr2_152117402_-SINEAluAluJr
CAediting_218444chr2_152117405_-SINEAluAluJr
CAediting_218445chr2_152117431_-SINEAluAluJr
CAediting_218446chr2_152117432_-SINEAluAluJr
CAediting_218447chr2_152117454_-SINEAluAluJr
CAediting_218449chr2_152120210_-SINEAluAluYj4
CAediting_218450chr2_152120213_-SINEAluAluYj4
CAediting_218451chr2_152120235_-SINEAluAluYj4
CAediting_218452chr2_152121170_-SINEAluAluJo
CAediting_218453chr2_152122384_-SINEAluAluJr
CAediting_218455chr2_152129423_-SINEAluAluJb
CAediting_218456chr2_152130324_-SINEAluAluYm1
CAediting_218457chr2_152130380_-SINEAluAluYm1
CAediting_218458chr2_152130390_-SINEAluAluYm1
CAediting_218459chr2_152130809_-SINEAluAluSg7
CAediting_218460chr2_152136271_-SINEAluAluSx1
CAediting_218461chr2_152136343_-SINEAluAluSx1
CAediting_218462chr2_152136433_-SINEAluAluSx1
CAediting_218463chr2_152136962_-SINEAluAluSz
CAediting_218464chr2_152136963_-SINEAluAluSz
CAediting_218465chr2_152136967_-SINEAluAluSz
CAediting_218466chr2_152136980_-SINEAluAluSz
CAediting_218467chr2_152136992_-SINEAluAluSz
CAediting_218468chr2_152137000_-SINEAluAluSz
CAediting_218469chr2_152137006_-SINEAluAluSz
CAediting_218470chr2_152137008_-SINEAluAluSz
CAediting_218471chr2_152137023_-SINEAluAluSz
CAediting_218472chr2_152137033_-SINEAluAluSz
CAediting_218473chr2_152137041_-SINEAluAluSz
CAediting_218474chr2_152137078_-SINEAluAluSz
CAediting_218475chr2_152137083_-SINEAluAluSz
CAediting_218476chr2_152137085_-SINEAluAluSz
CAediting_218477chr2_152137086_-SINEAluAluSz
CAediting_218478chr2_152137088_-SINEAluAluSz
CAediting_218479chr2_152137103_-SINEAluAluSz
CAediting_218480chr2_152137134_-SINEAluAluSz
CAediting_218481chr2_152137152_-SINEAluAluSz
CAediting_218482chr2_152137167_-SINEAluAluSz
CAediting_218483chr2_152141291_-SINEAluAluSx
CAediting_218484chr2_152141390_-SINEAluAluSx
CAediting_218485chr2_152141399_-SINEAluAluSx
CAediting_218486chr2_152141406_-SINEAluAluSx
CAediting_218487chr2_152141482_-SINEAluAluSx
CAediting_218488chr2_152141487_-SINEAluAluSx
CAediting_218489chr2_152141515_-SINEAluAluSx
CAediting_218490chr2_152146025_-SINEAluAluSq
CAediting_218491chr2_152148467_-SINEAluAluJo
CAediting_218492chr2_152149604_-SINEAluAluSz
CAediting_218493chr2_152149605_-SINEAluAluSz
CAediting_218494chr2_152149609_-SINEAluAluSz
CAediting_218495chr2_152149613_-SINEAluAluSz
CAediting_218496chr2_152150582_-SINEAluAluJr
CAediting_218497chr2_152150616_-SINEAluAluJr
CAediting_218498chr2_152150737_-SINEAluAluJr
CAediting_218499chr2_152150744_-SINEAluAluJr
CAediting_218500chr2_152150807_-SINEAluAluJr
CAediting_218501chr2_152151306_-SINEAluAluSx4
CAediting_218502chr2_152151330_-SINEAluAluSx4
CAediting_218503chr2_152151457_-SINEAluAluSx4
CAediting_218504chr2_152152117_-SINEAluAluJb
CAediting_218505chr2_152152118_-SINEAluAluJb
CAediting_218506chr2_152157663_-LTRERVL-MaLRMLT1A
CAediting_218507chr2_152159254_-SINEAluAluJr
CAediting_218508chr2_152161890_-SINEAluAluSq2
CAediting_218509chr2_152161891_-SINEAluAluSq2
CAediting_218510chr2_152161915_-SINEAluAluSq2
CAediting_218511chr2_152161919_-SINEAluAluSq2
CAediting_218512chr2_152161920_-SINEAluAluSq2
CAediting_218513chr2_152161955_-SINEAluAluSq2
CAediting_218514chr2_152161960_-SINEAluAluSq2
CAediting_218515chr2_152161961_-SINEAluAluSq2
CAediting_218516chr2_152162104_-SINEAluAluSq2
CAediting_218517chr2_152162321_-SINEAluAluJr4
CAediting_218518chr2_152162327_-SINEAluAluJr4
CAediting_218519chr2_152162354_-SINEAluAluJr4
CAediting_218520chr2_152162464_-SINEAluAluJr4
CAediting_218521chr2_152162468_-SINEAluAluJr4
CAediting_218522chr2_152162527_-SINEAluAluJr4
CAediting_218523chr2_152162535_-SINEAluAluJr4
CAediting_218524chr2_152162541_-SINEAluAluJr4
CAediting_218525chr2_152162543_-SINEAluAluJr4
CAediting_218526chr2_152162710_-SINEAluAluSx
CAediting_218527chr2_152162774_-SINEAluAluSx
CAediting_218528chr2_152164410_-SINEAluAluSp
CAediting_218529chr2_152164466_-SINEAluAluSp
CAediting_218530chr2_152165258_-SINEAluAluSc8
CAediting_218531chr2_152165938_-SINEAluAluSz6
CAediting_218532chr2_152165982_-SINEAluAluSz6
CAediting_218533chr2_152166098_-SINEAluAluSz6
CAediting_218534chr2_152166117_-SINEAluAluSz6
CAediting_218535chr2_152166140_-SINEAluAluSz6
CAediting_218536chr2_152168324_-SINEAluAluSg
CAediting_218537chr2_152169405_-SINEAluAluJb
CAediting_218538chr2_152169415_-SINEAluAluJb
CAediting_218539chr2_152169441_-SINEAluAluJb
CAediting_218540chr2_152169450_-SINEAluAluJb
CAediting_218541chr2_152169892_-SINEAluAluSx1
CAediting_218542chr2_152169935_-SINEAluAluSx1
CAediting_218543chr2_152169946_-SINEAluAluSx1
CAediting_218544chr2_152169953_-SINEAluAluSx1
CAediting_218545chr2_152170002_-SINEAluAluSx1
CAediting_218546chr2_152170011_-SINEAluAluSx1
CAediting_218547chr2_152170909_-SINEAluAluSx
CAediting_218548chr2_152172807_-SINEAluAluSz

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RNA A-to-I editing events in the alternative splicing sites for STAM2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
IRCAediting_218442chr2_152117383_-152117383:1521173915SS0+6iAGGCTAGGA-1.82AGGCTAGGG-2.51
ESCAediting_218454chr2_152123940_-152123933:1521239553SS0+5iTTTTTCTTTCTGATTAATAGACA6.9TTTTTCTTTCTGATTGATAGACA6.55

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000115145.8.STAM2.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000115145.8.STAM2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for STAM2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for STAM2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for STAM2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_218435chr2_152117213_-ENSG00000115145.8ENST00000263904hsa-miR-4793-5p1521172091521172168mer-1a152117209152117235152.00-23.04
CAediting_218435chr2_152117213_-ENSG00000115145.8ENST00000263904hsa-miR-6870-3p1521172071521172148mer-1a152117207152117228140.00-13.24
CAediting_218438chr2_152117320_-ENSG00000115145.8ENST00000263904hsa-miR-9411521173171521173237mer-m8152117316152117338153.00-24.09
CAediting_218438chr2_152117320_-ENSG00000115145.8ENST00000263904hsa-miR-9411521173171521173237mer-m8152117316152117338153.00-24.09
CAediting_218438chr2_152117320_-ENSG00000115145.8ENST00000263904hsa-miR-9411521173171521173237mer-m8152117316152117338153.00-24.09
CAediting_218438chr2_152117320_-ENSG00000115145.8ENST00000263904hsa-miR-9411521173171521173237mer-m8152117316152117338153.00-24.09
CAediting_218438chr2_152117320_-ENSG00000115145.8ENST00000263904hsa-miR-9411521173171521173237mer-m8152117316152117338153.00-24.09
CAediting_218439chr2_152117338_-ENSG00000115145.8ENST00000263904hsa-miR-5781521173361521173427mer-m8152117335152117356150.00-11.67
CAediting_218440chr2_152117342_-ENSG00000115145.8ENST00000263904hsa-miR-3678-3p1521173391521173468mer-1a152117339152117360144.00-13.72
CAediting_218440chr2_152117342_-ENSG00000115145.8ENST00000263904hsa-miR-4756-3p1521173421521173487mer-m8152117341152117361154.00-17.88
CAediting_218440chr2_152117342_-ENSG00000115145.8ENST00000263904hsa-miR-5571521173371521173437mer-1a152117337152117360144.00-24.06
CAediting_218442chr2_152117383_-ENSG00000115145.8ENST00000263904hsa-miR-5195-5p1521173811521173877mer-m8152117380152117406141.00-17.41
CAediting_218442chr2_152117383_-ENSG00000115145.8ENST00000263904hsa-miR-6771-3p1521173791521173857mer-m8152117378152117398155.00-25.85
CAediting_218443chr2_152117402_-ENSG00000115145.8ENST00000263904hsa-miR-454-5p1521174021521174087mer-m8152117401152117421141.00-13.90
CAediting_218443chr2_152117402_-ENSG00000115145.8ENST00000263904hsa-miR-5195-5p1521173991521174068mer-1a152117399152117424146.00-19.32
CAediting_218445chr2_152117431_-ENSG00000115145.8ENST00000263904hsa-miR-625-3p1521174301521174367mer-m8152117429152117450144.00-12.62
CAediting_218445chr2_152117431_-ENSG00000115145.8ENST00000263904hsa-miR-80521521174261521174327mer-1a152117426152117444152.00-29.37
CAediting_218446chr2_152117432_-ENSG00000115145.8ENST00000263904hsa-miR-6381521174261521174327mer-1a152117426152117450145.00-26.60
CAediting_218449chr2_152120210_-ENSG00000115145.8ENST00000263904hsa-miR-5911521202081521202147mer-m8152120207152120226147.00-14.78
CAediting_218451chr2_152120235_-ENSG00000115145.8ENST00000263904hsa-miR-1228-5p1521202311521202366mer152120230152120252142.00-23.63
CAediting_218451chr2_152120235_-ENSG00000115145.8ENST00000263904hsa-miR-1285-3p1521202301521202356mer152120229152120250146.00-27.47
CAediting_218451chr2_152120235_-ENSG00000115145.8ENST00000263904hsa-miR-1285-3p1521202301521202356mer152120229152120250146.00-27.47
CAediting_218451chr2_152120235_-ENSG00000115145.8ENST00000263904hsa-miR-44861521202301521202367mer-m8152120229152120245145.00-18.64

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_218451chr2_152120235_-ENSG00000115145.8ENST00000263904hsa-miR-12621521202311521202377mer-m8152120230152120251140-14.05
CAediting_218447chr2_152117454_-ENSG00000115145.8ENST00000263904hsa-miR-3126-3p1521174501521174578mer-1a152117450152117471149-11.4
CAediting_218447chr2_152117454_-ENSG00000115145.8ENST00000263904hsa-miR-31761521174521521174598mer-1a152117452152117473147-20.58
CAediting_218448chr2_152120204_-ENSG00000115145.8ENST00000263904hsa-miR-3664-5p1521202001521202067mer-m8152120199152120217150-17.38
CAediting_218440chr2_152117342_-ENSG00000115145.8ENST00000263904hsa-miR-36741521173381521173458mer-1a152117338152117359140-9.69
CAediting_218447chr2_152117454_-ENSG00000115145.8ENST00000263904hsa-miR-3922-3p1521174521521174598mer-1a152117452152117473141-18.25
CAediting_218441chr2_152117356_-ENSG00000115145.8ENST00000263904hsa-miR-431-5p1521173521521173587mer-m8152117351152117372150-14.92
CAediting_218441chr2_152117356_-ENSG00000115145.8ENST00000263904hsa-miR-4659a-5p1521173551521173628mer-1a152117355152117376145-13.59
CAediting_218441chr2_152117356_-ENSG00000115145.8ENST00000263904hsa-miR-4659b-5p1521173551521173628mer-1a152117355152117373145-14.24
CAediting_218451chr2_152120235_-ENSG00000115145.8ENST00000263904hsa-miR-4701-3p1521202311521202377mer-m8152120230152120250153-22.38
CAediting_218435chr2_152117213_-ENSG00000115145.8ENST00000263904hsa-miR-4743-3p1521172121521172187mer-m8152117211152117232142-16.76
CAediting_218435chr2_152117213_-ENSG00000115145.8ENST00000263904hsa-miR-4778-5p1521172111521172177mer-m8152117210152117230149-14.58
CAediting_218438chr2_152117320_-ENSG00000115145.8ENST00000263904hsa-miR-47941521173191521173257mer-m8152117318152117339144-12.26
CAediting_218437chr2_152117311_-ENSG00000115145.8ENST00000263904hsa-miR-4999-3p1521173081521173147mer-m8152117307152117326144-12.81
CAediting_218450chr2_152120213_-ENSG00000115145.8ENST00000263904hsa-miR-5089-3p1521202131521202197mer-m8152120212152120232146-18.26
CAediting_218445chr2_152117431_-ENSG00000115145.8ENST00000263904hsa-miR-5089-5p1521174261521174327mer-m8152117425152117447144-13.6
CAediting_218451chr2_152120235_-ENSG00000115145.8ENST00000263904hsa-miR-542-3p1521202341521202407mer-m8152120233152120254153-15.36
CAediting_218438chr2_152117320_-ENSG00000115145.8ENST00000263904hsa-miR-6504-5p1521173191521173246mer152117318152117338140-14.86
CAediting_218451chr2_152120235_-ENSG00000115145.8ENST00000263904hsa-miR-6736-5p1521202311521202377mer-m8152120230152120254147-21.24
CAediting_218435chr2_152117213_-ENSG00000115145.8ENST00000263904hsa-miR-6758-3p1521172071521172148mer-1a152117207152117225152-13.45
CAediting_218438chr2_152117320_-ENSG00000115145.8ENST00000263904hsa-miR-6765-3p1521173161521173227mer-m8152117315152117335152-20.07
CAediting_218440chr2_152117342_-ENSG00000115145.8ENST00000263904hsa-miR-6832-5p1521173401521173478mer-1a152117340152117362140-19.45
CAediting_218447chr2_152117454_-ENSG00000115145.8ENST00000263904hsa-miR-6878-3p1521174541521174607mer-m8152117453152117473145-18.37
CAediting_218436chr2_152117300_-ENSG00000115145.8ENST00000263904hsa-miR-80521521172941521173007mer-1a152117294152117314146-20.97

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_228905chr2_188297554_+ENSG00000115145.8ENST00000263904hsa-miR-561-3p1521186261521186338mer-1a152118626152118647144-9.94

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_573001chr7_92204086_-ENSG00000115145.8ENST00000263904hsa-miR-1285-5p1521195491521195568mer-1a152119549152119569140-10.69
CAediting_442554chr5_154685830_+ENSG00000115145.8ENST00000263904hsa-miR-13031521196721521196787mer-m8152119671152119691141-11.55
CAediting_393chr1_1167164_+ENSG00000115145.8ENST00000263904hsa-miR-200b-3p1521189081521189147mer-m8152118907152118927148-11.6
CAediting_393chr1_1167164_+ENSG00000115145.8ENST00000263904hsa-miR-200b-3p1521188081521188147mer-m8152118807152118828148-7.55
CAediting_393chr1_1167164_+ENSG00000115145.8ENST00000263904hsa-miR-200b-3p1521199661521199727mer-m8152119965152119986145-13.95
CAediting_688081chr9_63819627_+ENSG00000115145.8ENST00000263904hsa-miR-4477b1521199881521199958mer-1a152119988152120009140-6.6
CAediting_228905chr2_188297554_+ENSG00000115145.8ENST00000263904hsa-miR-561-3p1521189711521189788mer-1a152118971152118987142-6.31
CAediting_228905chr2_188297554_+ENSG00000115145.8ENST00000263904hsa-miR-561-3p1521204911521204977mer-m8152120490152120512149-4.21
CAediting_524911chr7_5495852_-ENSG00000115145.8ENST00000263904hsa-miR-589-3p1521188241521188307mer-m8152118823152118846140-9.96
CAediting_1351755chr19_40282625_-ENSG00000115145.8ENST00000263904hsa-miR-6411521185461521185527mer-m8152118545152118570145-10.94

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for STAM2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000263904.4protein_codingSoverviewSoverview
ENST00000489389.1retained_intronSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_218435ENST00000263904.4chr2_152117213_--1499.10-1493.30-1516.90
CAediting_218436ENST00000263904.4chr2_152117300_--1493.00-1493.30-1516.90
CAediting_218437ENST00000263904.4chr2_152117311_--1493.30-1493.30-1516.90
CAediting_218438ENST00000263904.4chr2_152117320_--1492.60-1493.30-1516.90
CAediting_218439ENST00000263904.4chr2_152117338_--1493.40-1493.30-1516.90
CAediting_218440ENST00000263904.4chr2_152117342_--1493.30-1493.30-1516.90
CAediting_218441ENST00000263904.4chr2_152117356_--1493.00-1493.30-1516.90
CAediting_218442ENST00000263904.4chr2_152117383_--1496.10-1493.30-1516.90
CAediting_218443ENST00000263904.4chr2_152117402_--1495.80-1493.30-1516.90
CAediting_218444ENST00000263904.4chr2_152117405_--1493.00-1493.30-1516.90
CAediting_218445ENST00000263904.4chr2_152117431_--1493.30-1493.30-1516.90
CAediting_218446ENST00000263904.4chr2_152117432_--1495.30-1493.30-1516.90
CAediting_218447ENST00000263904.4chr2_152117454_--1495.00-1493.30-1516.90
CAediting_218448ENST00000263904.4chr2_152120204_--1492.60-1493.30-1516.90
CAediting_218449ENST00000263904.4chr2_152120210_--1497.10-1493.30-1516.90
CAediting_218450ENST00000263904.4chr2_152120213_--1495.90-1493.30-1516.90
CAediting_218451ENST00000263904.4chr2_152120235_--1496.70-1493.30-1516.90
CAediting_218454ENST00000489389.1chr2_152123940_--325.80-322.60-325.80

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Relation with ADAR for STAM2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_218448chr2_152120204_-..2.41244575081042e-050.478709775504289..

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Relation with cancer stages for STAM2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for STAM2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
BRCACAediting_218448chr2_152120204_-0.02048513043674330.0363093137603

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RelatedDrugs for STAM2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for STAM2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource