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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

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Related drugs with this gene

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Related diseases with this gene

Editing gene: CALCOCO2 (CAeditome ID:10241)

Gene summary for CALCOCO2

check button Gene summary
Gene informationGene symbol

CALCOCO2

Gene ID

10241

Gene namecalcium binding and coiled-coil domain 2
SynonymsNDP52
Cytomap

17q21.32

Type of geneprotein-coding
Descriptioncalcium-binding and coiled-coil domain-containing protein 2antigen nuclear dot 52 kDa proteinnuclear domain 10 protein 52nuclear domain 10 protein NDP52nuclear dot protein 52
Modification date20210518
UniProtAcc

Q13137

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
CALCOCO2

GO:0034341

Calcium-binding and coiled-coil domain-containing protein 2

9230084

CALCOCO2

GO:0005737

Calcium-binding and coiled-coil domain-containing protein 2

9230084

CALCOCO2

GO:0005737

Calcium-binding and coiled-coil domain-containing protein 2

9230084

CALCOCO2

GO:0005776

Calcium-binding and coiled-coil domain-containing protein 2

25771791

CALCOCO2

GO:0005829

Calcium-binding and coiled-coil domain-containing protein 2

0000052

CALCOCO2

GO:0016605

Calcium-binding and coiled-coil domain-containing protein 2

7540613

CALCOCO2

GO:0043231

Calcium-binding and coiled-coil domain-containing protein 2

0000052

CALCOCO2

GO:0048471

Calcium-binding and coiled-coil domain-containing protein 2

9230084


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RNA A-to-I events for CALCOCO2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000136436.13
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1209999(48832215, +), CAediting_1210000(48832216, +), CAediting_1210001(48833352, +), CAediting_1210002(48833373, +), CAediting_1210003(48833390, +), CAediting_1210004(48833393, +), CAediting_1210005(48833394, +), CAediting_1210006(48833395, +), CAediting_1210007(48833396, +), CAediting_1210008(48833397, +), CAediting_1210009(48833399, +), CAediting_1210010(48833403, +), CAediting_1210011(48833404, +), CAediting_1210012(48833408, +), CAediting_1210013(48833927, +), CAediting_1210014(48833964, +), CAediting_1210015(48834776, +), CAediting_1210016(48834866, +), CAediting_1210017(48834877, +), CAediting_1210018(48834883, +), CAediting_1210019(48834926, +), CAediting_1210020(48834961, +), CAediting_1210021(48834966, +), CAediting_1210022(48835948, +), CAediting_1210023(48835951, +), CAediting_1210024(48836667, +), CAediting_1210025(48836680, +), CAediting_1210026(48836687, +), CAediting_1210027(48836703, +), CAediting_1210028(48836966, +), CAediting_1210029(48837197, +), CAediting_1210030(48837212, +), CAediting_1210031(48837213, +), CAediting_1210032(48837214, +), CAediting_1210033(48837223, +), CAediting_1210034(48837224, +), CAediting_1210035(48837229, +), CAediting_1210036(48837232, +), CAediting_1210037(48837233, +), CAediting_1210038(48839449, +), CAediting_1210039(48839478, +), CAediting_1210040(48840194, +), CAediting_1210041(48840247, +), CAediting_1210042(48842179, +), CAediting_1210043(48842217, +), CAediting_1210044(48842241, +), CAediting_1210045(48842289, +), CAediting_1210046(48842294, +), CAediting_1210047(48842339, +), CAediting_1210048(48842407, +), CAediting_1210049(48842425, +), CAediting_1210050(48842690, +), CAediting_1210051(48842691, +), CAediting_1210052(48842694, +), CAediting_1210053(48842715, +), CAediting_1210054(48842721, +), CAediting_1210055(48842734, +), CAediting_1210056(48842740, +), CAediting_1210057(48842741, +), CAediting_1210058(48842758, +), CAediting_1210059(48842770, +), CAediting_1210060(48842782, +), CAediting_1210061(48842787, +), CAediting_1210062(48842788, +), CAediting_1210063(48842798, +), CAediting_1210064(48842821, +), CAediting_1210065(48842824, +), CAediting_1210066(48842827, +), CAediting_1210067(48842828, +), CAediting_1210068(48842831, +), CAediting_1210069(48842838, +), CAediting_1210070(48842891, +), CAediting_1210071(48843901, +), CAediting_1210072(48843907, +), CAediting_1210073(48843927, +), CAediting_1210074(48843934, +), CAediting_1210075(48843948, +), CAediting_1210076(48843977, +), CAediting_1210077(48843983, +), CAediting_1210078(48843984, +), CAediting_1210079(48844001, +), CAediting_1210080(48844013, +), CAediting_1210081(48844023, +), CAediting_1210082(48844039, +), CAediting_1210083(48844049, +), CAediting_1210084(48844050, +), CAediting_1210085(48844057, +), CAediting_1210086(48844066, +), CAediting_1210087(48844072, +), CAediting_1210088(48844092, +), CAediting_1210089(48844117, +), CAediting_1210090(48844121, +), CAediting_1210091(48844122, +), CAediting_1210092(48844143, +), CAediting_1210093(48844144, +), CAediting_1210094(48844145, +), CAediting_1210095(48844157, +), CAediting_1210096(48844472, +), CAediting_1210097(48844473, +), CAediting_1210098(48844494, +), CAediting_1210099(48844529, +), CAediting_1210100(48844535, +), CAediting_1210101(48844554, +), CAediting_1210102(48844555, +), CAediting_1210103(48844572, +), CAediting_1210104(48844580, +), CAediting_1210105(48844589, +), CAediting_1210106(48844618, +), CAediting_1210107(48844619, +), CAediting_1210108(48844635, +), CAediting_1210109(48844667, +), CAediting_1210110(48844670, +), CAediting_1210111(48844673, +), CAediting_1210112(48844679, +), CAediting_1210113(48844683, +), CAediting_1210114(48844684, +), CAediting_1210115(48844692, +), CAediting_1210116(48844701, +), CAediting_1210117(48844707, +), CAediting_1210118(48844727, +), CAediting_1210119(48844740, +), CAediting_1210120(48844747, +), CAediting_1210121(48844752, +), CAediting_1210122(48844765, +), CAediting_1210123(48844770, +), CAediting_1210124(48844794, +), CAediting_1210125(48844902, +), CAediting_1210126(48844903, +), CAediting_1210127(48844907, +), CAediting_1210128(48844916, +), CAediting_1210129(48844920, +), CAediting_1210130(48844921, +), CAediting_1210131(48844934, +), CAediting_1210132(48844935, +), CAediting_1210133(48844960, +), CAediting_1210134(48844965, +), CAediting_1210135(48844971, +), CAediting_1210136(48844974, +), CAediting_1210137(48844980, +), CAediting_1210138(48845015, +), CAediting_1210139(48845025, +), CAediting_1210140(48845061, +), CAediting_1210141(48845062, +), CAediting_1210142(48845088, +), CAediting_1210143(48845091, +), CAediting_1210144(48845115, +), CAediting_1210145(48845124, +), CAediting_1210146(48845452, +), CAediting_1210147(48845474, +), CAediting_1210148(48845475, +), CAediting_1210149(48845480, +), CAediting_1210150(48845488, +), CAediting_1210151(48845501, +), CAediting_1210152(48845510, +), CAediting_1210153(48845519, +), CAediting_1210154(48845528, +), CAediting_1210155(48845529, +), CAediting_1210156(48845554, +), CAediting_1210157(48845565, +), CAediting_1210158(48845569, +), CAediting_1210159(48845574, +), CAediting_1210160(48845577, +), CAediting_1210161(48845579, +), CAediting_1210162(48845582, +), CAediting_1210163(48845608, +), CAediting_1210164(48845609, +), CAediting_1210165(48845614, +), CAediting_1210166(48845618, +), CAediting_1210167(48845635, +), CAediting_1210168(48845636, +), CAediting_1210169(48845641, +), CAediting_1210170(48845649, +), CAediting_1210171(48845650, +), CAediting_1210172(48845670, +), CAediting_1210173(48845674, +), CAediting_1210174(48845678, +), CAediting_1210175(48845679, +), CAediting_1210176(48845681, +), CAediting_1210177(48845684, +), CAediting_1210178(48845708, +), CAediting_1210179(48845709, +), CAediting_1210180(48845711, +), CAediting_1210181(48845746, +), CAediting_1210182(48845749, +), CAediting_1210183(48845751, +), CAediting_1210184(48846156, +), CAediting_1210185(48846160, +), CAediting_1210186(48846201, +), CAediting_1210187(48846211, +), CAediting_1210188(48846217, +), CAediting_1210189(48846237, +), CAediting_1210190(48846254, +), CAediting_1210191(48846265, +), CAediting_1210192(48846266, +), CAediting_1210193(48847687, +), CAediting_1210194(48847695, +), CAediting_1210195(48847706, +), CAediting_1210196(48847755, +), CAediting_1210197(48847756, +), CAediting_1210198(48847759, +), CAediting_1210199(48847773, +), CAediting_1210200(48847774, +), CAediting_1210201(48847830, +), CAediting_1210202(48847835, +), CAediting_1210203(48847864, +), CAediting_1210204(48847875, +), CAediting_1210205(48847876, +), CAediting_1210206(48847877, +), CAediting_1210207(48847889, +), CAediting_1210208(48847893, +), CAediting_1210209(48847902, +), CAediting_1210210(48847915, +), CAediting_1210211(48847916, +), CAediting_1210212(48847917, +), CAediting_1210213(48847923, +), CAediting_1210214(48847929, +), CAediting_1210215(48849562, +), CAediting_1210216(48849585, +), CAediting_1210217(48854061, +), CAediting_1210218(48854087, +), CAediting_1210219(48854096, +), CAediting_1210220(48854101, +), CAediting_1210221(48854120, +), CAediting_1210222(48854131, +), CAediting_1210223(48854132, +), CAediting_1210224(48854140, +), CAediting_1210225(48854151, +), CAediting_1210226(48854154, +), CAediting_1210227(48854157, +), CAediting_1210228(48854158, +), CAediting_1210229(48854164, +), CAediting_1210230(48854165, +), CAediting_1210231(48854166, +), CAediting_1210232(48854169, +), CAediting_1210233(48854666, +), CAediting_1210234(48854667, +), CAediting_1210235(48854668, +), CAediting_1210236(48856829, +), CAediting_1210237(48856938, +), CAediting_1210238(48856940, +), CAediting_1210239(48857064, +), CAediting_1210240(48858391, +), CAediting_1210241(48858423, +), CAediting_1210242(48858459, +), CAediting_1210243(48858463, +), CAediting_1210244(48858510, +), CAediting_1210245(48858513, +), CAediting_1210246(48858582, +), CAediting_1210247(48858799, +), CAediting_1210248(48858800, +), CAediting_1210249(48858852, +), CAediting_1210250(48858883, +), CAediting_1210251(48858885, +), CAediting_1210252(48858898, +), CAediting_1210253(48858902, +), CAediting_1210254(48858916, +), CAediting_1210255(48858924, +), CAediting_1210256(48858925, +), CAediting_1210257(48858938, +), CAediting_1210258(48858951, +), CAediting_1210259(48858974, +), CAediting_1210260(48858991, +), CAediting_1210261(48859003, +), CAediting_1210262(48859009, +), CAediting_1210263(48859385, +), CAediting_1210264(48861143, +), CAediting_1210265(48861148, +), CAediting_1210266(48861158, +), CAediting_1210267(48861192, +), CAediting_1210268(48861234, +), CAediting_1210269(48861357, +), CAediting_1210270(48861451, +), CAediting_1210271(48861459, +), CAediting_1210272(48861463, +), CAediting_1210273(48861468, +), CAediting_1210274(48861852, +), CAediting_1210275(48861898, +), CAediting_1210276(48864087, +), CAediting_1210277(48864088, +), CAediting_1210278(48864089, +), CAediting_1210279(48864091, +), CAediting_1210280(48864105, +), CAediting_1210281(48864109, +), CAediting_1210282(48864121, +), CAediting_1210283(48864122, +), CAediting_1210284(48864129, +), CAediting_1210285(48864134, +), CAediting_1210286(48864141, +), CAediting_1210287(48864143, +), CAediting_1210288(48864163, +), CAediting_1210289(48864164, +), CAediting_1210290(48864168, +), CAediting_1210291(48864174, +), CAediting_1210292(48864189, +), CAediting_1210293(48864190, +), CAediting_1210294(48864193, +), CAediting_1210295(48864200, +), CAediting_1210296(48864203, +), CAediting_1210297(48864205, +), CAediting_1210298(48864219, +), CAediting_1210299(48864225, +), CAediting_1210300(48864230, +), CAediting_1210301(48864244, +), CAediting_1210302(48864247, +), CAediting_1210303(48864249, +), CAediting_1210304(48864253, +), CAediting_1210305(48864261, +), CAediting_1210306(48864273, +), CAediting_1210307(48864285, +), CAediting_1210308(48864286, +), CAediting_1210309(48864303, +), CAediting_1210310(48864311, +), CAediting_1210311(48864316, +), CAediting_1210312(48864326, +), CAediting_1210313(48864338, +), CAediting_1210314(48864340, +), CAediting_1210315(48864341, +), CAediting_1210316(48864347, +), CAediting_1210317(48864351, +), CAediting_1210318(48865260, +), CAediting_1210319(48865262, +), CAediting_1210320(48865264, +), CAediting_1210321(48865266, +), CAediting_1210322(48865272, +), CAediting_1210323(48865280, +), CAediting_1210324(48865284, +), CAediting_1210325(48865289, +), CAediting_1210326(48865296, +), CAediting_1210327(48865299, +), CAediting_1210328(48865312, +), CAediting_1210329(48865313, +), CAediting_1210330(48865327, +), CAediting_1210331(48865332, +), CAediting_1210332(48865337, +), CAediting_1210333(48865350, +), CAediting_1210334(48865359, +), CAediting_1210335(48865362, +), CAediting_1210336(48865369, +), CAediting_1210337(48865372, +), CAediting_1210338(48865385, +), CAediting_1210339(48865398, +), CAediting_1210340(48865399, +), CAediting_1210341(48865408, +), CAediting_1210342(48865414, +), CAediting_1210343(48865417, +), CAediting_1210344(48865431, +), CAediting_1210345(48865439, +), CAediting_1210346(48865443, +), CAediting_1210347(48865455, +), CAediting_1210348(48865463, +), CAediting_1210349(48865471, +), CAediting_1210350(48865475, +), CAediting_1210351(48865492, +), CAediting_1210352(48865493, +), CAediting_1210353(48865494, +), CAediting_1210354(48865506, +), CAediting_1210355(48865508, +), CAediting_1210356(48865515, +), CAediting_1210357(48865528, +), CAediting_1210358(48865848, +), CAediting_1210359(48865858, +), CAediting_1210360(48865866, +), CAediting_1210361(48865867, +), CAediting_1210362(48865872, +), CAediting_1210363(48865875, +), CAediting_1210364(48865883, +), CAediting_1210365(48865889, +), CAediting_1210366(48865905, +), CAediting_1210367(48865910, +), CAediting_1210368(48865918, +), CAediting_1210369(48865919, +), CAediting_1210370(48865921, +), CAediting_1210371(48865924, +), CAediting_1210372(48865933, +), CAediting_1210373(48865934, +), CAediting_1210374(48865944, +), CAediting_1210375(48865967, +), CAediting_1210376(48865968, +), CAediting_1210377(48865969, +), CAediting_1210378(48865974, +), CAediting_1210379(48865978, +), CAediting_1210380(48865990, +), CAediting_1210381(48865994, +), CAediting_1210382(48866000, +), CAediting_1210383(48866001, +), CAediting_1210384(48866010, +), CAediting_1210385(48866027, +), CAediting_1210386(48866029, +), CAediting_1210387(48866031, +), CAediting_1210388(48866032, +), CAediting_1210389(48866040, +), CAediting_1210390(48866041, +), CAediting_1210391(48866061, +), CAediting_1210392(48866065, +), CAediting_1210393(48866070, +), CAediting_1210394(48866077, +), CAediting_1210395(48866080, +), CAediting_1210396(48866085, +), CAediting_1210397(48866090, +), CAediting_1210398(48866096, +), CAediting_1210399(48866100, +), CAediting_1210400(48866102, +), CAediting_1210401(48866104, +), CAediting_1210402(48866107, +), CAediting_1210403(48866108, +), CAediting_1210404(48866120, +), CAediting_1210405(48866121, +), CAediting_1210406(48866122, +), CAediting_1210407(48866125, +), CAediting_1210408(48866126, +), CAediting_1210409(48866127, +), CAediting_1210410(48866130, +), CAediting_1210411(48866131, +), CAediting_1210412(48866132, +), CAediting_1210413(48866134, +), CAediting_1210414(48866519, +),

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RNA editing positional annotations for CALCOCO2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1209999chr17_48832215_+ncRNA_intronic
CAediting_1210000chr17_48832216_+ncRNA_intronic
CAediting_1210001chr17_48833352_+ncRNA_intronic
CAediting_1210002chr17_48833373_+ncRNA_intronic
CAediting_1210003chr17_48833390_+ncRNA_intronic
CAediting_1210004chr17_48833393_+ncRNA_intronic
CAediting_1210005chr17_48833394_+ncRNA_intronic
CAediting_1210006chr17_48833395_+ncRNA_intronic
CAediting_1210007chr17_48833396_+ncRNA_intronic
CAediting_1210008chr17_48833397_+ncRNA_intronic
CAediting_1210009chr17_48833399_+ncRNA_intronic
CAediting_1210010chr17_48833403_+ncRNA_intronic
CAediting_1210011chr17_48833404_+ncRNA_intronic
CAediting_1210012chr17_48833408_+ncRNA_intronic
CAediting_1210013chr17_48833927_+ncRNA_intronic
CAediting_1210014chr17_48833964_+ncRNA_intronic
CAediting_1210015chr17_48834776_+ncRNA_intronic
CAediting_1210016chr17_48834866_+ncRNA_intronic
CAediting_1210017chr17_48834877_+ncRNA_intronic
CAediting_1210018chr17_48834883_+ncRNA_intronic
CAediting_1210019chr17_48834926_+ncRNA_intronic
CAediting_1210020chr17_48834961_+ncRNA_intronic
CAediting_1210021chr17_48834966_+ncRNA_intronic
CAediting_1210022chr17_48835948_+ncRNA_intronic
CAediting_1210023chr17_48835951_+ncRNA_intronic
CAediting_1210024chr17_48836667_+ncRNA_intronic
CAediting_1210025chr17_48836680_+ncRNA_intronic
CAediting_1210026chr17_48836687_+ncRNA_intronic
CAediting_1210027chr17_48836703_+ncRNA_intronic
CAediting_1210028chr17_48836966_+ncRNA_intronic
CAediting_1210029chr17_48837197_+ncRNA_intronic
CAediting_1210030chr17_48837212_+ncRNA_intronic
CAediting_1210031chr17_48837213_+ncRNA_intronic
CAediting_1210032chr17_48837214_+ncRNA_intronic
CAediting_1210033chr17_48837223_+ncRNA_intronic
CAediting_1210034chr17_48837224_+ncRNA_intronic
CAediting_1210035chr17_48837229_+ncRNA_intronic
CAediting_1210036chr17_48837232_+ncRNA_intronic
CAediting_1210037chr17_48837233_+ncRNA_intronic
CAediting_1210038chr17_48839449_+ncRNA_exonic
CAediting_1210039chr17_48839478_+ncRNA_exonic
CAediting_1210040chr17_48840194_+ncRNA_intronic
CAediting_1210041chr17_48840247_+ncRNA_intronic
CAediting_1210042chr17_48842179_+ncRNA_exonic
CAediting_1210043chr17_48842217_+ncRNA_exonic
CAediting_1210044chr17_48842241_+ncRNA_exonic
CAediting_1210045chr17_48842289_+ncRNA_exonic
CAediting_1210046chr17_48842294_+ncRNA_exonic
CAediting_1210047chr17_48842339_+ncRNA_exonic
CAediting_1210048chr17_48842407_+ncRNA_exonic
CAediting_1210049chr17_48842425_+ncRNA_exonic
CAediting_1210050chr17_48842690_+ncRNA_intronic
CAediting_1210051chr17_48842691_+ncRNA_intronic
CAediting_1210052chr17_48842694_+ncRNA_intronic
CAediting_1210053chr17_48842715_+ncRNA_intronic
CAediting_1210054chr17_48842721_+ncRNA_intronic
CAediting_1210055chr17_48842734_+ncRNA_intronic
CAediting_1210056chr17_48842740_+ncRNA_intronic
CAediting_1210057chr17_48842741_+ncRNA_intronic
CAediting_1210058chr17_48842758_+ncRNA_intronic
CAediting_1210059chr17_48842770_+ncRNA_intronic
CAediting_1210060chr17_48842782_+ncRNA_intronic
CAediting_1210061chr17_48842787_+ncRNA_intronic
CAediting_1210062chr17_48842788_+ncRNA_intronic
CAediting_1210063chr17_48842798_+ncRNA_intronic
CAediting_1210064chr17_48842821_+ncRNA_intronic
CAediting_1210065chr17_48842824_+ncRNA_intronic
CAediting_1210066chr17_48842827_+ncRNA_intronic
CAediting_1210067chr17_48842828_+ncRNA_intronic
CAediting_1210068chr17_48842831_+ncRNA_intronic
CAediting_1210069chr17_48842838_+ncRNA_intronic
CAediting_1210070chr17_48842891_+ncRNA_intronic
CAediting_1210071chr17_48843901_+splicing
CAediting_1210072chr17_48843907_+exonic
CAediting_1210073chr17_48843927_+exonic
CAediting_1210074chr17_48843934_+exonic
CAediting_1210075chr17_48843948_+exonic
CAediting_1210076chr17_48843977_+exonic
CAediting_1210077chr17_48843983_+exonic
CAediting_1210078chr17_48843984_+exonic
CAediting_1210079chr17_48844001_+exonic
CAediting_1210080chr17_48844013_+exonic
CAediting_1210081chr17_48844023_+exonic
CAediting_1210082chr17_48844039_+ncRNA_intronic
CAediting_1210083chr17_48844049_+ncRNA_intronic
CAediting_1210084chr17_48844050_+ncRNA_intronic
CAediting_1210085chr17_48844057_+ncRNA_intronic
CAediting_1210086chr17_48844066_+ncRNA_intronic
CAediting_1210087chr17_48844072_+ncRNA_intronic
CAediting_1210088chr17_48844092_+ncRNA_intronic
CAediting_1210089chr17_48844117_+ncRNA_intronic
CAediting_1210090chr17_48844121_+ncRNA_intronic
CAediting_1210091chr17_48844122_+ncRNA_intronic
CAediting_1210092chr17_48844143_+ncRNA_intronic
CAediting_1210093chr17_48844144_+ncRNA_intronic
CAediting_1210094chr17_48844145_+ncRNA_intronic
CAediting_1210095chr17_48844157_+ncRNA_intronic
CAediting_1210096chr17_48844472_+ncRNA_intronic
CAediting_1210097chr17_48844473_+ncRNA_intronic
CAediting_1210098chr17_48844494_+ncRNA_intronic
CAediting_1210099chr17_48844529_+ncRNA_intronic
CAediting_1210100chr17_48844535_+ncRNA_intronic
CAediting_1210101chr17_48844554_+ncRNA_intronic
CAediting_1210102chr17_48844555_+ncRNA_intronic
CAediting_1210103chr17_48844572_+ncRNA_intronic
CAediting_1210104chr17_48844580_+ncRNA_intronic
CAediting_1210105chr17_48844589_+ncRNA_intronic
CAediting_1210106chr17_48844618_+ncRNA_intronic
CAediting_1210107chr17_48844619_+ncRNA_intronic
CAediting_1210108chr17_48844635_+ncRNA_intronic
CAediting_1210109chr17_48844667_+ncRNA_intronic
CAediting_1210110chr17_48844670_+ncRNA_intronic
CAediting_1210111chr17_48844673_+ncRNA_intronic
CAediting_1210112chr17_48844679_+ncRNA_intronic
CAediting_1210113chr17_48844683_+ncRNA_intronic
CAediting_1210114chr17_48844684_+ncRNA_intronic
CAediting_1210115chr17_48844692_+ncRNA_intronic
CAediting_1210116chr17_48844701_+ncRNA_intronic
CAediting_1210117chr17_48844707_+ncRNA_intronic
CAediting_1210118chr17_48844727_+ncRNA_intronic
CAediting_1210119chr17_48844740_+ncRNA_intronic
CAediting_1210120chr17_48844747_+ncRNA_intronic
CAediting_1210121chr17_48844752_+ncRNA_intronic
CAediting_1210122chr17_48844765_+ncRNA_intronic
CAediting_1210123chr17_48844770_+ncRNA_intronic
CAediting_1210124chr17_48844794_+ncRNA_intronic
CAediting_1210125chr17_48844902_+ncRNA_intronic
CAediting_1210126chr17_48844903_+ncRNA_intronic
CAediting_1210127chr17_48844907_+ncRNA_intronic
CAediting_1210128chr17_48844916_+ncRNA_intronic
CAediting_1210129chr17_48844920_+ncRNA_intronic
CAediting_1210130chr17_48844921_+ncRNA_intronic
CAediting_1210131chr17_48844934_+ncRNA_intronic
CAediting_1210132chr17_48844935_+ncRNA_intronic
CAediting_1210133chr17_48844960_+ncRNA_intronic
CAediting_1210134chr17_48844965_+ncRNA_intronic
CAediting_1210135chr17_48844971_+ncRNA_intronic
CAediting_1210136chr17_48844974_+ncRNA_intronic
CAediting_1210137chr17_48844980_+ncRNA_intronic
CAediting_1210138chr17_48845015_+ncRNA_intronic
CAediting_1210139chr17_48845025_+ncRNA_intronic
CAediting_1210140chr17_48845061_+ncRNA_intronic
CAediting_1210141chr17_48845062_+ncRNA_intronic
CAediting_1210142chr17_48845088_+ncRNA_intronic
CAediting_1210143chr17_48845091_+ncRNA_intronic
CAediting_1210144chr17_48845115_+ncRNA_intronic
CAediting_1210145chr17_48845124_+ncRNA_intronic
CAediting_1210146chr17_48845452_+ncRNA_intronic
CAediting_1210147chr17_48845474_+ncRNA_intronic
CAediting_1210148chr17_48845475_+ncRNA_intronic
CAediting_1210149chr17_48845480_+ncRNA_intronic
CAediting_1210150chr17_48845488_+ncRNA_intronic
CAediting_1210151chr17_48845501_+ncRNA_intronic
CAediting_1210152chr17_48845510_+ncRNA_intronic
CAediting_1210153chr17_48845519_+ncRNA_intronic
CAediting_1210154chr17_48845528_+ncRNA_intronic
CAediting_1210155chr17_48845529_+ncRNA_intronic
CAediting_1210156chr17_48845554_+ncRNA_intronic
CAediting_1210157chr17_48845565_+ncRNA_intronic
CAediting_1210158chr17_48845569_+ncRNA_intronic
CAediting_1210159chr17_48845574_+ncRNA_intronic
CAediting_1210160chr17_48845577_+ncRNA_intronic
CAediting_1210161chr17_48845579_+ncRNA_intronic
CAediting_1210162chr17_48845582_+ncRNA_intronic
CAediting_1210163chr17_48845608_+ncRNA_intronic
CAediting_1210164chr17_48845609_+ncRNA_intronic
CAediting_1210165chr17_48845614_+ncRNA_intronic
CAediting_1210166chr17_48845618_+ncRNA_intronic
CAediting_1210167chr17_48845635_+ncRNA_intronic
CAediting_1210168chr17_48845636_+ncRNA_intronic
CAediting_1210169chr17_48845641_+ncRNA_intronic
CAediting_1210170chr17_48845649_+ncRNA_intronic
CAediting_1210171chr17_48845650_+ncRNA_intronic
CAediting_1210172chr17_48845670_+ncRNA_intronic
CAediting_1210173chr17_48845674_+ncRNA_intronic
CAediting_1210174chr17_48845678_+ncRNA_intronic
CAediting_1210175chr17_48845679_+ncRNA_intronic
CAediting_1210176chr17_48845681_+ncRNA_intronic
CAediting_1210177chr17_48845684_+ncRNA_intronic
CAediting_1210178chr17_48845708_+ncRNA_intronic
CAediting_1210179chr17_48845709_+ncRNA_intronic
CAediting_1210180chr17_48845711_+ncRNA_intronic
CAediting_1210181chr17_48845746_+ncRNA_intronic
CAediting_1210182chr17_48845749_+ncRNA_intronic
CAediting_1210183chr17_48845751_+ncRNA_intronic
CAediting_1210184chr17_48846156_+ncRNA_intronic
CAediting_1210185chr17_48846160_+ncRNA_intronic
CAediting_1210186chr17_48846201_+ncRNA_intronic
CAediting_1210187chr17_48846211_+ncRNA_intronic
CAediting_1210188chr17_48846217_+ncRNA_intronic
CAediting_1210189chr17_48846237_+ncRNA_intronic
CAediting_1210190chr17_48846254_+ncRNA_intronic
CAediting_1210191chr17_48846265_+ncRNA_intronic
CAediting_1210192chr17_48846266_+ncRNA_intronic
CAediting_1210193chr17_48847687_+ncRNA_intronic
CAediting_1210194chr17_48847695_+ncRNA_intronic
CAediting_1210195chr17_48847706_+ncRNA_intronic
CAediting_1210196chr17_48847755_+ncRNA_exonic
CAediting_1210197chr17_48847756_+ncRNA_exonic
CAediting_1210198chr17_48847759_+ncRNA_exonic
CAediting_1210199chr17_48847773_+ncRNA_exonic
CAediting_1210200chr17_48847774_+ncRNA_exonic
CAediting_1210201chr17_48847830_+ncRNA_exonic
CAediting_1210202chr17_48847835_+ncRNA_exonic
CAediting_1210203chr17_48847864_+ncRNA_exonic
CAediting_1210204chr17_48847875_+ncRNA_exonic
CAediting_1210205chr17_48847876_+ncRNA_exonic
CAediting_1210206chr17_48847877_+ncRNA_exonic
CAediting_1210207chr17_48847889_+ncRNA_exonic
CAediting_1210208chr17_48847893_+ncRNA_exonic
CAediting_1210209chr17_48847902_+ncRNA_exonic
CAediting_1210210chr17_48847915_+ncRNA_exonic
CAediting_1210211chr17_48847916_+ncRNA_exonic
CAediting_1210212chr17_48847917_+ncRNA_exonic
CAediting_1210213chr17_48847923_+ncRNA_exonic
CAediting_1210214chr17_48847929_+ncRNA_exonic
CAediting_1210215chr17_48849562_+ncRNA_intronic
CAediting_1210216chr17_48849585_+ncRNA_intronic
CAediting_1210217chr17_48854061_+ncRNA_intronic
CAediting_1210218chr17_48854087_+ncRNA_intronic
CAediting_1210219chr17_48854096_+ncRNA_intronic
CAediting_1210220chr17_48854101_+ncRNA_intronic
CAediting_1210221chr17_48854120_+ncRNA_intronic
CAediting_1210222chr17_48854131_+ncRNA_intronic
CAediting_1210223chr17_48854132_+ncRNA_intronic
CAediting_1210224chr17_48854140_+ncRNA_intronic
CAediting_1210225chr17_48854151_+ncRNA_intronic
CAediting_1210226chr17_48854154_+ncRNA_intronic
CAediting_1210227chr17_48854157_+ncRNA_intronic
CAediting_1210228chr17_48854158_+ncRNA_intronic
CAediting_1210229chr17_48854164_+ncRNA_intronic
CAediting_1210230chr17_48854165_+ncRNA_intronic
CAediting_1210231chr17_48854166_+ncRNA_intronic
CAediting_1210232chr17_48854169_+ncRNA_intronic
CAediting_1210233chr17_48854666_+ncRNA_intronic
CAediting_1210234chr17_48854667_+ncRNA_intronic
CAediting_1210235chr17_48854668_+ncRNA_intronic
CAediting_1210236chr17_48856829_+ncRNA_intronic
CAediting_1210237chr17_48856938_+ncRNA_intronic
CAediting_1210238chr17_48856940_+ncRNA_intronic
CAediting_1210239chr17_48857064_+ncRNA_intronic
CAediting_1210240chr17_48858391_+ncRNA_intronic
CAediting_1210241chr17_48858423_+ncRNA_intronic
CAediting_1210242chr17_48858459_+ncRNA_intronic
CAediting_1210243chr17_48858463_+ncRNA_intronic
CAediting_1210244chr17_48858510_+ncRNA_intronic
CAediting_1210245chr17_48858513_+ncRNA_intronic
CAediting_1210246chr17_48858582_+ncRNA_intronic
CAediting_1210247chr17_48858799_+ncRNA_intronic
CAediting_1210248chr17_48858800_+ncRNA_intronic
CAediting_1210249chr17_48858852_+ncRNA_intronic
CAediting_1210250chr17_48858883_+ncRNA_intronic
CAediting_1210251chr17_48858885_+ncRNA_intronic
CAediting_1210252chr17_48858898_+ncRNA_intronic
CAediting_1210253chr17_48858902_+ncRNA_intronic
CAediting_1210254chr17_48858916_+ncRNA_intronic
CAediting_1210255chr17_48858924_+ncRNA_intronic
CAediting_1210256chr17_48858925_+ncRNA_intronic
CAediting_1210257chr17_48858938_+ncRNA_intronic
CAediting_1210258chr17_48858951_+ncRNA_intronic
CAediting_1210259chr17_48858974_+ncRNA_intronic
CAediting_1210260chr17_48858991_+ncRNA_intronic
CAediting_1210261chr17_48859003_+ncRNA_intronic
CAediting_1210262chr17_48859009_+ncRNA_intronic
CAediting_1210263chr17_48859385_+ncRNA_intronic
CAediting_1210264chr17_48861143_+intronic
CAediting_1210265chr17_48861148_+intronic
CAediting_1210266chr17_48861158_+intronic
CAediting_1210267chr17_48861192_+intronic
CAediting_1210268chr17_48861234_+intronic
CAediting_1210269chr17_48861357_+intronic
CAediting_1210270chr17_48861451_+intronic
CAediting_1210271chr17_48861459_+intronic
CAediting_1210272chr17_48861463_+intronic
CAediting_1210273chr17_48861468_+intronic
CAediting_1210274chr17_48861852_+intronic
CAediting_1210275chr17_48861898_+intronic
CAediting_1210276chr17_48864087_+UTR3
CAediting_1210277chr17_48864088_+UTR3
CAediting_1210278chr17_48864089_+UTR3
CAediting_1210279chr17_48864091_+UTR3
CAediting_1210280chr17_48864105_+UTR3
CAediting_1210281chr17_48864109_+UTR3
CAediting_1210282chr17_48864121_+UTR3
CAediting_1210283chr17_48864122_+UTR3
CAediting_1210284chr17_48864129_+UTR3
CAediting_1210285chr17_48864134_+UTR3
CAediting_1210286chr17_48864141_+UTR3
CAediting_1210287chr17_48864143_+UTR3
CAediting_1210288chr17_48864163_+UTR3
CAediting_1210289chr17_48864164_+UTR3
CAediting_1210290chr17_48864168_+UTR3
CAediting_1210291chr17_48864174_+UTR3
CAediting_1210292chr17_48864189_+UTR3
CAediting_1210293chr17_48864190_+UTR3
CAediting_1210294chr17_48864193_+UTR3
CAediting_1210295chr17_48864200_+UTR3
CAediting_1210296chr17_48864203_+UTR3
CAediting_1210297chr17_48864205_+UTR3
CAediting_1210298chr17_48864219_+UTR3
CAediting_1210299chr17_48864225_+UTR3
CAediting_1210300chr17_48864230_+UTR3
CAediting_1210301chr17_48864244_+UTR3
CAediting_1210302chr17_48864247_+UTR3
CAediting_1210303chr17_48864249_+UTR3
CAediting_1210304chr17_48864253_+UTR3
CAediting_1210305chr17_48864261_+UTR3
CAediting_1210306chr17_48864273_+UTR3
CAediting_1210307chr17_48864285_+UTR3
CAediting_1210308chr17_48864286_+UTR3
CAediting_1210309chr17_48864303_+UTR3
CAediting_1210310chr17_48864311_+UTR3
CAediting_1210311chr17_48864316_+UTR3
CAediting_1210312chr17_48864326_+UTR3
CAediting_1210313chr17_48864338_+UTR3
CAediting_1210314chr17_48864340_+UTR3
CAediting_1210315chr17_48864341_+UTR3
CAediting_1210316chr17_48864347_+UTR3
CAediting_1210317chr17_48864351_+UTR3
CAediting_1210318chr17_48865260_+ncRNA_exonic
CAediting_1210319chr17_48865262_+ncRNA_exonic
CAediting_1210320chr17_48865264_+ncRNA_exonic
CAediting_1210321chr17_48865266_+ncRNA_exonic
CAediting_1210322chr17_48865272_+ncRNA_exonic
CAediting_1210323chr17_48865280_+ncRNA_exonic
CAediting_1210324chr17_48865284_+ncRNA_exonic
CAediting_1210325chr17_48865289_+ncRNA_intronic
CAediting_1210326chr17_48865296_+ncRNA_intronic
CAediting_1210327chr17_48865299_+ncRNA_intronic
CAediting_1210328chr17_48865312_+ncRNA_intronic
CAediting_1210329chr17_48865313_+ncRNA_intronic
CAediting_1210330chr17_48865327_+ncRNA_intronic
CAediting_1210331chr17_48865332_+ncRNA_intronic
CAediting_1210332chr17_48865337_+ncRNA_intronic
CAediting_1210333chr17_48865350_+ncRNA_intronic
CAediting_1210334chr17_48865359_+ncRNA_intronic
CAediting_1210335chr17_48865362_+ncRNA_intronic
CAediting_1210336chr17_48865369_+ncRNA_intronic
CAediting_1210337chr17_48865372_+ncRNA_intronic
CAediting_1210338chr17_48865385_+ncRNA_intronic
CAediting_1210339chr17_48865398_+ncRNA_intronic
CAediting_1210340chr17_48865399_+ncRNA_intronic
CAediting_1210341chr17_48865408_+ncRNA_intronic
CAediting_1210342chr17_48865414_+ncRNA_intronic
CAediting_1210343chr17_48865417_+ncRNA_intronic
CAediting_1210344chr17_48865431_+ncRNA_intronic
CAediting_1210345chr17_48865439_+ncRNA_intronic
CAediting_1210346chr17_48865443_+ncRNA_intronic
CAediting_1210347chr17_48865455_+ncRNA_intronic
CAediting_1210348chr17_48865463_+ncRNA_intronic
CAediting_1210349chr17_48865471_+ncRNA_intronic
CAediting_1210350chr17_48865475_+ncRNA_intronic
CAediting_1210351chr17_48865492_+ncRNA_intronic
CAediting_1210352chr17_48865493_+ncRNA_intronic
CAediting_1210353chr17_48865494_+ncRNA_intronic
CAediting_1210354chr17_48865506_+ncRNA_intronic
CAediting_1210355chr17_48865508_+ncRNA_intronic
CAediting_1210356chr17_48865515_+ncRNA_intronic
CAediting_1210357chr17_48865528_+ncRNA_intronic
CAediting_1210358chr17_48865848_+ncRNA_intronic
CAediting_1210359chr17_48865858_+ncRNA_intronic
CAediting_1210360chr17_48865866_+ncRNA_intronic
CAediting_1210361chr17_48865867_+ncRNA_intronic
CAediting_1210362chr17_48865872_+ncRNA_intronic
CAediting_1210363chr17_48865875_+ncRNA_intronic
CAediting_1210364chr17_48865883_+ncRNA_intronic
CAediting_1210365chr17_48865889_+ncRNA_intronic
CAediting_1210366chr17_48865905_+ncRNA_intronic
CAediting_1210367chr17_48865910_+ncRNA_intronic
CAediting_1210368chr17_48865918_+ncRNA_intronic
CAediting_1210369chr17_48865919_+ncRNA_intronic
CAediting_1210370chr17_48865921_+ncRNA_intronic
CAediting_1210371chr17_48865924_+ncRNA_intronic
CAediting_1210372chr17_48865933_+ncRNA_intronic
CAediting_1210373chr17_48865934_+ncRNA_intronic
CAediting_1210374chr17_48865944_+ncRNA_intronic
CAediting_1210375chr17_48865967_+ncRNA_intronic
CAediting_1210376chr17_48865968_+ncRNA_intronic
CAediting_1210377chr17_48865969_+ncRNA_intronic
CAediting_1210378chr17_48865974_+ncRNA_intronic
CAediting_1210379chr17_48865978_+ncRNA_intronic
CAediting_1210380chr17_48865990_+ncRNA_intronic
CAediting_1210381chr17_48865994_+ncRNA_intronic
CAediting_1210382chr17_48866000_+ncRNA_intronic
CAediting_1210383chr17_48866001_+ncRNA_intronic
CAediting_1210384chr17_48866010_+ncRNA_intronic
CAediting_1210385chr17_48866027_+ncRNA_intronic
CAediting_1210386chr17_48866029_+ncRNA_intronic
CAediting_1210387chr17_48866031_+ncRNA_intronic
CAediting_1210388chr17_48866032_+ncRNA_intronic
CAediting_1210389chr17_48866040_+ncRNA_intronic
CAediting_1210390chr17_48866041_+ncRNA_intronic
CAediting_1210391chr17_48866061_+ncRNA_exonic
CAediting_1210392chr17_48866065_+ncRNA_exonic
CAediting_1210393chr17_48866070_+ncRNA_exonic
CAediting_1210394chr17_48866077_+ncRNA_exonic
CAediting_1210395chr17_48866080_+ncRNA_exonic
CAediting_1210396chr17_48866085_+ncRNA_exonic
CAediting_1210397chr17_48866090_+ncRNA_exonic
CAediting_1210398chr17_48866096_+ncRNA_exonic
CAediting_1210399chr17_48866100_+ncRNA_exonic
CAediting_1210400chr17_48866102_+ncRNA_exonic
CAediting_1210401chr17_48866104_+ncRNA_exonic
CAediting_1210402chr17_48866107_+ncRNA_exonic
CAediting_1210403chr17_48866108_+ncRNA_exonic
CAediting_1210404chr17_48866120_+ncRNA_exonic
CAediting_1210405chr17_48866121_+ncRNA_exonic
CAediting_1210406chr17_48866122_+ncRNA_exonic
CAediting_1210407chr17_48866125_+ncRNA_exonic
CAediting_1210408chr17_48866126_+ncRNA_exonic
CAediting_1210409chr17_48866127_+ncRNA_exonic
CAediting_1210410chr17_48866130_+ncRNA_exonic
CAediting_1210411chr17_48866131_+ncRNA_exonic
CAediting_1210412chr17_48866132_+ncRNA_exonic
CAediting_1210413chr17_48866134_+ncRNA_exonic
CAediting_1210414chr17_48866519_+ncRNA_exonic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1209999chr17_48832215_+SINEAluAluSx1
CAediting_1210000chr17_48832216_+SINEAluAluSx1
CAediting_1210001chr17_48833352_+SINEAluAluSg
CAediting_1210002chr17_48833373_+SINEAluAluSg
CAediting_1210003chr17_48833390_+SINEAluAluSg
CAediting_1210004chr17_48833393_+SINEAluAluSg
CAediting_1210005chr17_48833394_+SINEAluAluSg
CAediting_1210006chr17_48833395_+SINEAluAluSg
CAediting_1210007chr17_48833396_+SINEAluAluSg
CAediting_1210008chr17_48833397_+SINEAluAluSg
CAediting_1210009chr17_48833399_+SINEAluAluSg
CAediting_1210010chr17_48833403_+SINEAluAluSg
CAediting_1210011chr17_48833404_+SINEAluAluSg
CAediting_1210012chr17_48833408_+SINEAluAluSg
CAediting_1210013chr17_48833927_+SINEAluAluJb
CAediting_1210014chr17_48833964_+SINEAluAluJb
CAediting_1210015chr17_48834776_+SINEAluAluJo
CAediting_1210016chr17_48834866_+SINEAluAluJo
CAediting_1210017chr17_48834877_+SINEAluAluJo
CAediting_1210018chr17_48834883_+SINEAluAluJo
CAediting_1210019chr17_48834926_+SINEAluAluJo
CAediting_1210020chr17_48834961_+SINEAluAluJo
CAediting_1210021chr17_48834966_+SINEAluAluJo
CAediting_1210022chr17_48835948_+SINEAluAluSq2
CAediting_1210023chr17_48835951_+SINEAluAluSq2
CAediting_1210028chr17_48836966_+SINEAluAluSq
CAediting_1210038chr17_48839449_+SINEAluAluSx1
CAediting_1210039chr17_48839478_+SINEAluAluSx1
CAediting_1210040chr17_48840194_+SINEAluAluJb
CAediting_1210041chr17_48840247_+SINEAluAluJb
CAediting_1210042chr17_48842179_+SINEAluAluSx1
CAediting_1210043chr17_48842217_+SINEAluAluSx1
CAediting_1210044chr17_48842241_+SINEAluAluSx1
CAediting_1210045chr17_48842289_+SINEAluAluSx1
CAediting_1210046chr17_48842294_+SINEAluAluSx1
CAediting_1210047chr17_48842339_+SINEAluAluSx1
CAediting_1210048chr17_48842407_+SINEAluAluSx1
CAediting_1210049chr17_48842425_+SINEAluAluSx1
CAediting_1210050chr17_48842690_+SINEAluAluSg
CAediting_1210051chr17_48842691_+SINEAluAluSg
CAediting_1210052chr17_48842694_+SINEAluAluSg
CAediting_1210053chr17_48842715_+SINEAluAluSg
CAediting_1210054chr17_48842721_+SINEAluAluSg
CAediting_1210055chr17_48842734_+SINEAluAluSg
CAediting_1210056chr17_48842740_+SINEAluAluSg
CAediting_1210057chr17_48842741_+SINEAluAluSg
CAediting_1210058chr17_48842758_+SINEAluAluSg
CAediting_1210059chr17_48842770_+SINEAluAluSg
CAediting_1210060chr17_48842782_+SINEAluAluSg
CAediting_1210061chr17_48842787_+SINEAluAluSg
CAediting_1210062chr17_48842788_+SINEAluAluSg
CAediting_1210063chr17_48842798_+SINEAluAluSg
CAediting_1210064chr17_48842821_+SINEAluAluSg
CAediting_1210065chr17_48842824_+SINEAluAluSg
CAediting_1210066chr17_48842827_+SINEAluAluSg
CAediting_1210067chr17_48842828_+SINEAluAluSg
CAediting_1210068chr17_48842831_+SINEAluAluSg
CAediting_1210069chr17_48842838_+SINEAluAluSg
CAediting_1210070chr17_48842891_+SINEAluAluSg
CAediting_1210071chr17_48843901_+SINEAluAluSp
CAediting_1210072chr17_48843907_+SINEAluAluSp
CAediting_1210073chr17_48843927_+SINEAluAluSp
CAediting_1210074chr17_48843934_+SINEAluAluSp
CAediting_1210075chr17_48843948_+SINEAluAluSp
CAediting_1210076chr17_48843977_+SINEAluAluSp
CAediting_1210077chr17_48843983_+SINEAluAluSp
CAediting_1210078chr17_48843984_+SINEAluAluSp
CAediting_1210079chr17_48844001_+SINEAluAluSp
CAediting_1210080chr17_48844013_+SINEAluAluSp
CAediting_1210081chr17_48844023_+SINEAluAluSp
CAediting_1210082chr17_48844039_+SINEAluAluSp
CAediting_1210083chr17_48844049_+SINEAluAluSp
CAediting_1210084chr17_48844050_+SINEAluAluSp
CAediting_1210085chr17_48844057_+SINEAluAluSp
CAediting_1210086chr17_48844066_+SINEAluAluSp
CAediting_1210087chr17_48844072_+SINEAluAluSp
CAediting_1210088chr17_48844092_+SINEAluAluSp
CAediting_1210089chr17_48844117_+SINEAluAluSp
CAediting_1210090chr17_48844121_+SINEAluAluSp
CAediting_1210091chr17_48844122_+SINEAluAluSp
CAediting_1210092chr17_48844143_+SINEAluAluSp
CAediting_1210093chr17_48844144_+SINEAluAluSp
CAediting_1210094chr17_48844145_+SINEAluAluSp
CAediting_1210095chr17_48844157_+SINEAluAluSp
CAediting_1210096chr17_48844472_+SINEAluAluSq2
CAediting_1210097chr17_48844473_+SINEAluAluSq2
CAediting_1210098chr17_48844494_+SINEAluAluSq2
CAediting_1210099chr17_48844529_+SINEAluAluSq2
CAediting_1210100chr17_48844535_+SINEAluAluSq2
CAediting_1210101chr17_48844554_+SINEAluAluSq2
CAediting_1210102chr17_48844555_+SINEAluAluSq2
CAediting_1210103chr17_48844572_+SINEAluAluSq2
CAediting_1210104chr17_48844580_+SINEAluAluSq2
CAediting_1210105chr17_48844589_+SINEAluAluSq2
CAediting_1210106chr17_48844618_+SINEAluAluSx1
CAediting_1210107chr17_48844619_+SINEAluAluSx1
CAediting_1210108chr17_48844635_+SINEAluAluSx1
CAediting_1210109chr17_48844667_+SINEAluAluSx1
CAediting_1210110chr17_48844670_+SINEAluAluSx1
CAediting_1210111chr17_48844673_+SINEAluAluSx1
CAediting_1210112chr17_48844679_+SINEAluAluSx1
CAediting_1210113chr17_48844683_+SINEAluAluSx1
CAediting_1210114chr17_48844684_+SINEAluAluSx1
CAediting_1210115chr17_48844692_+SINEAluAluSx1
CAediting_1210116chr17_48844701_+SINEAluAluSx1
CAediting_1210117chr17_48844707_+SINEAluAluSx1
CAediting_1210118chr17_48844727_+SINEAluAluSx1
CAediting_1210119chr17_48844740_+SINEAluAluSx1
CAediting_1210120chr17_48844747_+SINEAluAluSx1
CAediting_1210121chr17_48844752_+SINEAluAluSx1
CAediting_1210122chr17_48844765_+SINEAluAluSx1
CAediting_1210123chr17_48844770_+SINEAluAluSx1
CAediting_1210124chr17_48844794_+SINEAluAluSx1
CAediting_1210125chr17_48844902_+SINEAluAluSz
CAediting_1210126chr17_48844903_+SINEAluAluSz
CAediting_1210127chr17_48844907_+SINEAluAluSz
CAediting_1210128chr17_48844916_+SINEAluAluSz
CAediting_1210129chr17_48844920_+SINEAluAluSz
CAediting_1210130chr17_48844921_+SINEAluAluSz
CAediting_1210131chr17_48844934_+SINEAluAluSz
CAediting_1210132chr17_48844935_+SINEAluAluSz
CAediting_1210133chr17_48844960_+SINEAluAluSz
CAediting_1210134chr17_48844965_+SINEAluAluSz
CAediting_1210135chr17_48844971_+SINEAluAluSz
CAediting_1210136chr17_48844974_+SINEAluAluSz
CAediting_1210137chr17_48844980_+SINEAluAluSz
CAediting_1210138chr17_48845015_+SINEAluAluSz
CAediting_1210139chr17_48845025_+SINEAluAluSz
CAediting_1210140chr17_48845061_+SINEAluAluSz
CAediting_1210141chr17_48845062_+SINEAluAluSz
CAediting_1210142chr17_48845088_+SINEAluAluSz
CAediting_1210143chr17_48845091_+SINEAluAluSz
CAediting_1210144chr17_48845115_+SINEAluAluSz
CAediting_1210145chr17_48845124_+SINEAluAluSz
CAediting_1210146chr17_48845452_+SINEAluAluSp
CAediting_1210147chr17_48845474_+SINEAluAluSp
CAediting_1210148chr17_48845475_+SINEAluAluSp
CAediting_1210149chr17_48845480_+SINEAluAluSp
CAediting_1210150chr17_48845488_+SINEAluAluSp
CAediting_1210151chr17_48845501_+SINEAluAluSp
CAediting_1210152chr17_48845510_+SINEAluAluSp
CAediting_1210153chr17_48845519_+SINEAluAluSp
CAediting_1210154chr17_48845528_+SINEAluAluSp
CAediting_1210155chr17_48845529_+SINEAluAluSp
CAediting_1210156chr17_48845554_+SINEAluAluSp
CAediting_1210157chr17_48845565_+SINEAluAluSp
CAediting_1210158chr17_48845569_+SINEAluAluSp
CAediting_1210159chr17_48845574_+SINEAluAluSp
CAediting_1210160chr17_48845577_+SINEAluAluSp
CAediting_1210161chr17_48845579_+SINEAluAluSp
CAediting_1210162chr17_48845582_+SINEAluAluSp
CAediting_1210163chr17_48845608_+SINEAluAluSp
CAediting_1210164chr17_48845609_+SINEAluAluSp
CAediting_1210165chr17_48845614_+SINEAluAluSp
CAediting_1210166chr17_48845618_+SINEAluAluSp
CAediting_1210167chr17_48845635_+SINEAluAluSp
CAediting_1210168chr17_48845636_+SINEAluAluSp
CAediting_1210169chr17_48845641_+SINEAluAluSp
CAediting_1210170chr17_48845649_+SINEAluAluSp
CAediting_1210171chr17_48845650_+SINEAluAluSp
CAediting_1210172chr17_48845670_+SINEAluAluSp
CAediting_1210173chr17_48845674_+SINEAluAluSp
CAediting_1210174chr17_48845678_+SINEAluAluSp
CAediting_1210175chr17_48845679_+SINEAluAluSp
CAediting_1210176chr17_48845681_+SINEAluAluSp
CAediting_1210177chr17_48845684_+SINEAluAluSp
CAediting_1210178chr17_48845708_+SINEAluAluSp
CAediting_1210179chr17_48845709_+SINEAluAluSp
CAediting_1210180chr17_48845711_+SINEAluAluSp
CAediting_1210181chr17_48845746_+SINEAluAluSp
CAediting_1210182chr17_48845749_+SINEAluAluSp
CAediting_1210183chr17_48845751_+SINEAluAluSp
CAediting_1210184chr17_48846156_+SINEAluAluSz6
CAediting_1210185chr17_48846160_+SINEAluAluSz6
CAediting_1210186chr17_48846201_+SINEAluAluSz6
CAediting_1210187chr17_48846211_+SINEAluAluSz6
CAediting_1210188chr17_48846217_+SINEAluAluSz6
CAediting_1210189chr17_48846237_+SINEAluAluSz6
CAediting_1210190chr17_48846254_+SINEAluAluSz6
CAediting_1210191chr17_48846265_+SINEAluAluSz6
CAediting_1210192chr17_48846266_+SINEAluAluSz6
CAediting_1210193chr17_48847687_+SINEAluAluSx
CAediting_1210194chr17_48847695_+SINEAluAluSx
CAediting_1210195chr17_48847706_+SINEAluAluSx
CAediting_1210196chr17_48847755_+SINEAluAluSx
CAediting_1210197chr17_48847756_+SINEAluAluSx
CAediting_1210198chr17_48847759_+SINEAluAluSx
CAediting_1210199chr17_48847773_+SINEAluAluSx
CAediting_1210200chr17_48847774_+SINEAluAluSx
CAediting_1210201chr17_48847830_+SINEAluAluSx
CAediting_1210202chr17_48847835_+SINEAluAluSx
CAediting_1210203chr17_48847864_+SINEAluAluSx
CAediting_1210204chr17_48847875_+SINEAluAluSx
CAediting_1210205chr17_48847876_+SINEAluAluSx
CAediting_1210206chr17_48847877_+SINEAluAluSx
CAediting_1210207chr17_48847889_+SINEAluAluSx
CAediting_1210208chr17_48847893_+SINEAluAluSx
CAediting_1210209chr17_48847902_+SINEAluAluSx
CAediting_1210210chr17_48847915_+SINEAluAluSx
CAediting_1210211chr17_48847916_+SINEAluAluSx
CAediting_1210212chr17_48847917_+SINEAluAluSx
CAediting_1210213chr17_48847923_+SINEAluAluSx
CAediting_1210214chr17_48847929_+SINEAluAluSx
CAediting_1210215chr17_48849562_+SINEAluAluSx1
CAediting_1210216chr17_48849585_+SINEAluAluSx1
CAediting_1210217chr17_48854061_+SINEAluAluSx1
CAediting_1210218chr17_48854087_+SINEAluAluSx1
CAediting_1210219chr17_48854096_+SINEAluAluSx1
CAediting_1210220chr17_48854101_+SINEAluAluSx1
CAediting_1210221chr17_48854120_+SINEAluAluSx1
CAediting_1210222chr17_48854131_+SINEAluAluSx1
CAediting_1210223chr17_48854132_+SINEAluAluSx1
CAediting_1210224chr17_48854140_+SINEAluAluSx1
CAediting_1210225chr17_48854151_+SINEAluAluSx1
CAediting_1210226chr17_48854154_+SINEAluAluSx1
CAediting_1210227chr17_48854157_+SINEAluAluSx1
CAediting_1210228chr17_48854158_+SINEAluAluSx1
CAediting_1210229chr17_48854164_+SINEAluAluSx1
CAediting_1210230chr17_48854165_+SINEAluAluSx1
CAediting_1210231chr17_48854166_+SINEAluAluSx1
CAediting_1210232chr17_48854169_+SINEAluAluSx1
CAediting_1210233chr17_48854666_+SINEAluAluSx1
CAediting_1210234chr17_48854667_+SINEAluAluSx1
CAediting_1210235chr17_48854668_+SINEAluAluSx1
CAediting_1210236chr17_48856829_+SINEAluAluJo
CAediting_1210237chr17_48856938_+SINEAluAluJo
CAediting_1210238chr17_48856940_+SINEAluAluJo
CAediting_1210239chr17_48857064_+SINEAluAluJo
CAediting_1210240chr17_48858391_+SINEAluAluSz6
CAediting_1210241chr17_48858423_+SINEAluAluSz6
CAediting_1210242chr17_48858459_+SINEAluAluSz6
CAediting_1210243chr17_48858463_+SINEAluAluSz6
CAediting_1210244chr17_48858510_+SINEAluAluSz6
CAediting_1210245chr17_48858513_+SINEAluAluSz6
CAediting_1210246chr17_48858582_+SINEAluAluSz6
CAediting_1210247chr17_48858799_+SINEAluAluSx3
CAediting_1210248chr17_48858800_+SINEAluAluSx3
CAediting_1210249chr17_48858852_+SINEAluAluSx3
CAediting_1210250chr17_48858883_+SINEAluAluSx3
CAediting_1210251chr17_48858885_+SINEAluAluSx3
CAediting_1210252chr17_48858898_+SINEAluAluSx3
CAediting_1210253chr17_48858902_+SINEAluAluSx3
CAediting_1210254chr17_48858916_+SINEAluAluSx3
CAediting_1210255chr17_48858924_+SINEAluAluSx3
CAediting_1210256chr17_48858925_+SINEAluAluSx3
CAediting_1210257chr17_48858938_+SINEAluAluSx3
CAediting_1210258chr17_48858951_+SINEAluAluSx3
CAediting_1210259chr17_48858974_+SINEAluAluSx3
CAediting_1210260chr17_48858991_+SINEAluAluSx3
CAediting_1210261chr17_48859003_+SINEAluAluSx3
CAediting_1210262chr17_48859009_+SINEAluAluSx3
CAediting_1210263chr17_48859385_+SINEAluAluJr
CAediting_1210264chr17_48861143_+SINEAluAluSx
CAediting_1210265chr17_48861148_+SINEAluAluSx
CAediting_1210266chr17_48861158_+SINEAluAluSx
CAediting_1210267chr17_48861192_+SINEAluAluSx
CAediting_1210268chr17_48861234_+SINEAluAluSx
CAediting_1210269chr17_48861357_+SINEAluAluJb
CAediting_1210270chr17_48861451_+SINEAluAluJb
CAediting_1210271chr17_48861459_+SINEAluAluJb
CAediting_1210272chr17_48861463_+SINEAluAluJb
CAediting_1210273chr17_48861468_+SINEAluAluJb
CAediting_1210274chr17_48861852_+SINEAluAluSx1
CAediting_1210275chr17_48861898_+SINEAluAluSx1
CAediting_1210276chr17_48864087_+SINEAluAluSx
CAediting_1210277chr17_48864088_+SINEAluAluSx
CAediting_1210278chr17_48864089_+SINEAluAluSx
CAediting_1210279chr17_48864091_+SINEAluAluSx
CAediting_1210280chr17_48864105_+SINEAluAluSx
CAediting_1210281chr17_48864109_+SINEAluAluSx
CAediting_1210282chr17_48864121_+SINEAluAluSx
CAediting_1210283chr17_48864122_+SINEAluAluSx
CAediting_1210284chr17_48864129_+SINEAluAluSx
CAediting_1210285chr17_48864134_+SINEAluAluSx
CAediting_1210286chr17_48864141_+SINEAluAluSx
CAediting_1210287chr17_48864143_+SINEAluAluSx
CAediting_1210288chr17_48864163_+SINEAluAluSx
CAediting_1210289chr17_48864164_+SINEAluAluSx
CAediting_1210290chr17_48864168_+SINEAluAluSx
CAediting_1210291chr17_48864174_+SINEAluAluSx
CAediting_1210292chr17_48864189_+SINEAluAluSx
CAediting_1210293chr17_48864190_+SINEAluAluSx
CAediting_1210294chr17_48864193_+SINEAluAluSx
CAediting_1210295chr17_48864200_+SINEAluAluSx
CAediting_1210296chr17_48864203_+SINEAluAluSx
CAediting_1210297chr17_48864205_+SINEAluAluSx
CAediting_1210298chr17_48864219_+SINEAluAluSx
CAediting_1210299chr17_48864225_+SINEAluAluSx
CAediting_1210300chr17_48864230_+SINEAluAluSx
CAediting_1210301chr17_48864244_+SINEAluAluSx
CAediting_1210302chr17_48864247_+SINEAluAluSx
CAediting_1210303chr17_48864249_+SINEAluAluSx
CAediting_1210304chr17_48864253_+SINEAluAluSx
CAediting_1210305chr17_48864261_+SINEAluAluSx
CAediting_1210306chr17_48864273_+SINEAluAluSx
CAediting_1210307chr17_48864285_+SINEAluAluSx
CAediting_1210308chr17_48864286_+SINEAluAluSx
CAediting_1210309chr17_48864303_+SINEAluAluSx
CAediting_1210310chr17_48864311_+SINEAluAluSx
CAediting_1210311chr17_48864316_+SINEAluAluSx
CAediting_1210312chr17_48864326_+SINEAluAluSx
CAediting_1210313chr17_48864338_+SINEAluAluSx
CAediting_1210314chr17_48864340_+SINEAluAluSx
CAediting_1210315chr17_48864341_+SINEAluAluSx
CAediting_1210316chr17_48864347_+SINEAluAluSx
CAediting_1210317chr17_48864351_+SINEAluAluSx
CAediting_1210318chr17_48865260_+SINEAluAluYk3
CAediting_1210319chr17_48865262_+SINEAluAluYk3
CAediting_1210320chr17_48865264_+SINEAluAluYk3
CAediting_1210321chr17_48865266_+SINEAluAluYk3
CAediting_1210322chr17_48865272_+SINEAluAluYk3
CAediting_1210323chr17_48865280_+SINEAluAluYk3
CAediting_1210324chr17_48865284_+SINEAluAluYk3
CAediting_1210325chr17_48865289_+SINEAluAluYk3
CAediting_1210326chr17_48865296_+SINEAluAluYk3
CAediting_1210327chr17_48865299_+SINEAluAluYk3
CAediting_1210328chr17_48865312_+SINEAluAluYk3
CAediting_1210329chr17_48865313_+SINEAluAluYk3
CAediting_1210330chr17_48865327_+SINEAluAluYk3
CAediting_1210331chr17_48865332_+SINEAluAluYk3
CAediting_1210332chr17_48865337_+SINEAluAluYk3
CAediting_1210333chr17_48865350_+SINEAluAluYk3
CAediting_1210334chr17_48865359_+SINEAluAluYk3
CAediting_1210335chr17_48865362_+SINEAluAluYk3
CAediting_1210336chr17_48865369_+SINEAluAluYk3
CAediting_1210337chr17_48865372_+SINEAluAluYk3
CAediting_1210338chr17_48865385_+SINEAluAluYk3
CAediting_1210339chr17_48865398_+SINEAluAluYk3
CAediting_1210340chr17_48865399_+SINEAluAluYk3
CAediting_1210341chr17_48865408_+SINEAluAluYk3
CAediting_1210342chr17_48865414_+SINEAluAluYk3
CAediting_1210343chr17_48865417_+SINEAluAluYk3
CAediting_1210344chr17_48865431_+SINEAluAluYk3
CAediting_1210345chr17_48865439_+SINEAluAluYk3
CAediting_1210346chr17_48865443_+SINEAluAluYk3
CAediting_1210347chr17_48865455_+SINEAluAluYk3
CAediting_1210348chr17_48865463_+SINEAluAluYk3
CAediting_1210349chr17_48865471_+SINEAluAluYk3
CAediting_1210350chr17_48865475_+SINEAluAluYk3
CAediting_1210351chr17_48865492_+SINEAluAluYk3
CAediting_1210352chr17_48865493_+SINEAluAluYk3
CAediting_1210353chr17_48865494_+SINEAluAluYk3
CAediting_1210354chr17_48865506_+SINEAluAluYk3
CAediting_1210355chr17_48865508_+SINEAluAluYk3
CAediting_1210356chr17_48865515_+SINEAluAluYk3
CAediting_1210357chr17_48865528_+SINEAluAluYk3
CAediting_1210358chr17_48865848_+SINEAluAluSg7
CAediting_1210359chr17_48865858_+SINEAluAluSg7
CAediting_1210360chr17_48865866_+SINEAluAluSg7
CAediting_1210361chr17_48865867_+SINEAluAluSg7
CAediting_1210362chr17_48865872_+SINEAluAluSg7
CAediting_1210363chr17_48865875_+SINEAluAluSg7
CAediting_1210364chr17_48865883_+SINEAluAluSg7
CAediting_1210365chr17_48865889_+SINEAluAluSg7
CAediting_1210366chr17_48865905_+SINEAluAluSg7
CAediting_1210367chr17_48865910_+SINEAluAluSg7
CAediting_1210368chr17_48865918_+SINEAluAluSg7
CAediting_1210369chr17_48865919_+SINEAluAluSg7
CAediting_1210370chr17_48865921_+SINEAluAluSg7
CAediting_1210371chr17_48865924_+SINEAluAluSg7
CAediting_1210372chr17_48865933_+SINEAluAluSg7
CAediting_1210373chr17_48865934_+SINEAluAluSg7
CAediting_1210374chr17_48865944_+SINEAluAluSg7
CAediting_1210375chr17_48865967_+SINEAluAluSg7
CAediting_1210376chr17_48865968_+SINEAluAluSg7
CAediting_1210377chr17_48865969_+SINEAluAluSg7
CAediting_1210378chr17_48865974_+SINEAluAluSg7
CAediting_1210379chr17_48865978_+SINEAluAluSg7
CAediting_1210380chr17_48865990_+SINEAluAluSg7
CAediting_1210381chr17_48865994_+SINEAluAluSg7
CAediting_1210382chr17_48866000_+SINEAluAluSg7
CAediting_1210383chr17_48866001_+SINEAluAluSg7
CAediting_1210384chr17_48866010_+SINEAluAluSg7
CAediting_1210385chr17_48866027_+SINEAluAluSg7
CAediting_1210386chr17_48866029_+SINEAluAluSg7
CAediting_1210387chr17_48866031_+SINEAluAluSg7
CAediting_1210388chr17_48866032_+SINEAluAluSg7
CAediting_1210389chr17_48866040_+SINEAluAluSg7
CAediting_1210390chr17_48866041_+SINEAluAluSg7
CAediting_1210391chr17_48866061_+SINEAluAluSg7
CAediting_1210392chr17_48866065_+SINEAluAluSg7
CAediting_1210393chr17_48866070_+SINEAluAluSg7
CAediting_1210394chr17_48866077_+SINEAluAluSg7
CAediting_1210395chr17_48866080_+SINEAluAluSg7
CAediting_1210396chr17_48866085_+SINEAluAluSg7
CAediting_1210397chr17_48866090_+SINEAluAluSg7
CAediting_1210398chr17_48866096_+SINEAluAluSg7
CAediting_1210399chr17_48866100_+SINEAluAluSg7
CAediting_1210400chr17_48866102_+SINEAluAluSg7
CAediting_1210401chr17_48866104_+SINEAluAluSg7
CAediting_1210402chr17_48866107_+SINEAluAluSg7
CAediting_1210403chr17_48866108_+SINEAluAluSg7
CAediting_1210404chr17_48866120_+SINEAluAluSg7
CAediting_1210405chr17_48866121_+SINEAluAluSg7
CAediting_1210406chr17_48866122_+SINEAluAluSg7
CAediting_1210407chr17_48866125_+SINEAluAluSg7
CAediting_1210408chr17_48866126_+SINEAluAluSg7
CAediting_1210409chr17_48866127_+SINEAluAluSg7
CAediting_1210410chr17_48866130_+SINEAluAluSg7
CAediting_1210411chr17_48866131_+SINEAluAluSg7
CAediting_1210412chr17_48866132_+SINEAluAluSg7
CAediting_1210413chr17_48866134_+SINEAluAluSg7

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RNA A-to-I editing events in the alternative splicing sites for CALCOCO2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_1210042chr17_48842179_+48842160:488421823SS0+1iTTTTTTTTTTTTTTGAAATAGAG-10.41TTTTTTTTTTTTTTGAAATGGAG-1.66
IRCAediting_1210042chr17_48842179_+48842160:488421823SS0+1iTTTTTTTTTTTTTTGAAATAGAG-10.41TTTTTTTTTTTTTTGAAATGGAG-1.66
ESCAediting_1210071chr17_48843901_+48843882:488439043SS0+1iTAATTTAATTTATTTATTTAGAG-12.07TAATTTAATTTATTTATTTGGAG-3.32
MEX_1CAediting_1210071chr17_48843901_+48843882:488439043SS0+1iTAATTTAATTTATTTATTTAGAG-12.07TAATTTAATTTATTTATTTGGAG-3.32
ESCAediting_1210073chr17_48843927_+48843908:488439303SS0+1iGAGTTTCGTTCTGTTGCCCAGGC-10.32GAGTTTCGTTCTGTTGCCCGGGC-1.57
MEX_1CAediting_1210073chr17_48843927_+48843908:488439303SS0+1iGAGTTTCGTTCTGTTGCCCAGGC-10.32GAGTTTCGTTCTGTTGCCCGGGC-1.57
ESCAediting_1210076chr17_48843977_+48843976:488439845SS2+0iCAGGTTCAA1.19CGGGTTCAA-6.26
MEX_1CAediting_1210076chr17_48843977_+48843976:488439845SS2+0iCAGGTTCAA1.19CGGGTTCAA-6.26
ESCAediting_1210077chr17_48843983_+48843976:488439845SS0+5iCAGGTTCAA1.19CAGGTTCGA5.36
MEX_1CAediting_1210077chr17_48843983_+48843976:488439845SS0+5iCAGGTTCAA1.19CAGGTTCGA5.36
ESCAediting_1210078chr17_48843984_+48843976:488439845SS0+6iCAGGTTCAA1.19CAGGTTCAG2.78
MEX_1CAediting_1210078chr17_48843984_+48843976:488439845SS0+6iCAGGTTCAA1.19CAGGTTCAG2.78
IRCAediting_1210324chr17_48865284_+48865283:488652915SS2+0iCAGGCTAGA-1.82CGGGCTAGA-5.71
IRCAediting_1210325chr17_48865289_+48865283:488652915SS0+4iCAGGCTAGA-1.82CAGGCTGGA-2.16
IRCAediting_1210386chr17_48866029_+48866029:488660513SS0+20iAGAATTGCTTGAACCCGGGAGGC-28.9GGAATTGCTTGAACCCGGGAGGC-29.23
IRCAediting_1210387chr17_48866031_+48866029:488660513SS0+18iAGAATTGCTTGAACCCGGGAGGC-28.9AGGATTGCTTGAACCCGGGAGGC-29.05
IRCAediting_1210388chr17_48866032_+48866029:488660513SS0+17iAGAATTGCTTGAACCCGGGAGGC-28.9AGAGTTGCTTGAACCCGGGAGGC-29.13
IRCAediting_1210389chr17_48866040_+48866029:488660513SS0+9iAGAATTGCTTGAACCCGGGAGGC-28.9AGAATTGCTTGGACCCGGGAGGC-30.11
IRCAediting_1210390chr17_48866041_+48866029:488660513SS0+8iAGAATTGCTTGAACCCGGGAGGC-28.9AGAATTGCTTGAGCCCGGGAGGC-34.45

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000136436.13.CALCOCO2.
boxplot

check button Correlation between RNA A-to-I editing and PSI for ENSG00000136436.13.CALCOCO2.
boxplot

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CALCOCO2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CALCOCO2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for CALCOCO2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1210277chr17_48864088_+ENSG00000136436.13ENST00000258947hsa-miR-371b-5p48864081488640888mer-1a4886406748864088146.00-7.79
CAediting_1210277chr17_48864088_+ENSG00000136436.13ENST00000258947hsa-miR-373-5p48864081488640888mer-1a4886406748864088142.00-8.35
CAediting_1210277chr17_48864088_+ENSG00000136436.13ENST00000258947hsa-miR-514b-5p48864083488640886mer4886406848864089146.00-12.74
CAediting_1210277chr17_48864088_+ENSG00000136436.13ENST00000258947hsa-miR-616-5p48864081488640888mer-1a4886406748864088140.00-5.71
CAediting_1210280chr17_48864105_+ENSG00000136436.13ENST00000258947hsa-miR-1285-3p48864104488641096mer4886408948864110152.00-27.47
CAediting_1210280chr17_48864105_+ENSG00000136436.13ENST00000258947hsa-miR-1285-3p48864104488641096mer4886408948864110152.00-27.47
CAediting_1210280chr17_48864105_+ENSG00000136436.13ENST00000258947hsa-miR-448648864103488641097mer-m84886409448864110145.00-17.86
CAediting_1210286chr17_48864141_+ENSG00000136436.13ENST00000258947hsa-miR-17-3p48864137488641437mer-m84886412448864144162.00-20.97
CAediting_1210289chr17_48864164_+ENSG00000136436.13ENST00000258947hsa-miR-607848864160488641678mer-1a4886414948864167149.00-21.50
CAediting_1210292chr17_48864189_+ENSG00000136436.13ENST00000258947hsa-miR-6771-5p48864183488641897mer-m84886416948864190151.00-30.52
CAediting_1210293chr17_48864190_+ENSG00000136436.13ENST00000258947hsa-miR-619-5p48864184488641896mer4886416848864190141.00-27.75
CAediting_1210293chr17_48864190_+ENSG00000136436.13ENST00000258947hsa-miR-6852-5p48864185488641906mer4886417248864191145.00-27.18
CAediting_1210294chr17_48864193_+ENSG00000136436.13ENST00000258947hsa-miR-3614-5p48864186488641927mer-m84886416948864193154.00-24.00
CAediting_1210294chr17_48864193_+ENSG00000136436.13ENST00000258947hsa-miR-4691-3p48864190488641967mer-m84886417048864197146.00-25.53
CAediting_1210297chr17_48864205_+ENSG00000136436.13ENST00000258947hsa-miR-100-5p48864201488642077mer-m84886418548864208161.00-24.58
CAediting_1210297chr17_48864205_+ENSG00000136436.13ENST00000258947hsa-miR-99a-5p48864201488642077mer-m84886418848864208160.00-19.89
CAediting_1210297chr17_48864205_+ENSG00000136436.13ENST00000258947hsa-miR-99b-5p48864201488642077mer-m84886418548864208155.00-26.01
CAediting_1210304chr17_48864253_+ENSG00000136436.13ENST00000258947hsa-miR-340-3p48864247488642537mer-m84886423348864254149.00-18.07
CAediting_1210304chr17_48864253_+ENSG00000136436.13ENST00000258947hsa-miR-6827-3p48864247488642537mer-m84886423448864254153.00-18.20
CAediting_1210306chr17_48864273_+ENSG00000136436.13ENST00000258947hsa-miR-3940-3p48864270488642767mer-m84886425948864277144.00-24.53
CAediting_1210307chr17_48864285_+ENSG00000136436.13ENST00000258947hsa-miR-128948864283488642897mer-m84886426948864290154.00-21.53
CAediting_1210307chr17_48864285_+ENSG00000136436.13ENST00000258947hsa-miR-128948864283488642897mer-m84886426948864290154.00-21.53
CAediting_1210308chr17_48864286_+ENSG00000136436.13ENST00000258947hsa-miR-28-5p48864284488642907mer-m84886427148864291151.00-22.03
CAediting_1210308chr17_48864286_+ENSG00000136436.13ENST00000258947hsa-miR-313948864284488642907mer-m84886426948864291165.00-26.52
CAediting_1210308chr17_48864286_+ENSG00000136436.13ENST00000258947hsa-miR-708-5p48864284488642907mer-m84886427048864291150.00-22.21
CAediting_1210312chr17_48864326_+ENSG00000136436.13ENST00000258947hsa-miR-3189-3p48864321488643266mer4886430548864327141.00-20.65
CAediting_1210312chr17_48864326_+ENSG00000136436.13ENST00000258947hsa-miR-6813-3p48864321488643277mer-m84886430848864328142.00-11.15
CAediting_1210278chr17_48864089_+ENSG00000136436.13ENST00000258947hsa-miR-397748864084488640907mer-m84886406948864091146.00-7.70
CAediting_1210281chr17_48864109_+ENSG00000136436.13ENST00000258947hsa-miR-3940-3p48864106488641127mer-m84886409248864113151.00-22.47
CAediting_1210283chr17_48864122_+ENSG00000136436.13ENST00000258947hsa-miR-324-3p48864118488641247mer-m84886410348864125148.00-24.16
CAediting_1210283chr17_48864122_+ENSG00000136436.13ENST00000258947hsa-miR-425248864119488641257mer-m84886410648864126153.00-24.27
CAediting_1210283chr17_48864122_+ENSG00000136436.13ENST00000258947hsa-miR-6807-3p48864117488641226mer4886410148864123154.00-27.79
CAediting_1210285chr17_48864134_+ENSG00000136436.13ENST00000258947hsa-miR-6807-5p48864131488641377mer-m84886411748864138144.00-17.94
CAediting_1210290chr17_48864168_+ENSG00000136436.13ENST00000258947hsa-miR-589-5p48864166488641738mer-1a4886415348864173150.00-18.37
CAediting_1210291chr17_48864174_+ENSG00000136436.13ENST00000258947hsa-miR-3622a-5p48864172488641787mer-m84886415948864179154.00-22.95
CAediting_1210300chr17_48864230_+ENSG00000136436.13ENST00000258947hsa-miR-4661-5p48864224488642307mer-m84886421048864231141.00-16.07
CAediting_1210300chr17_48864230_+ENSG00000136436.13ENST00000258947hsa-miR-548ae-3p48864228488642347mer-m84886421548864235141.00-10.48
CAediting_1210300chr17_48864230_+ENSG00000136436.13ENST00000258947hsa-miR-548ae-3p48864228488642347mer-m84886421548864235141.00-10.48
CAediting_1210300chr17_48864230_+ENSG00000136436.13ENST00000258947hsa-miR-548ah-3p48864228488642347mer-m84886421348864235143.00-12.41
CAediting_1210300chr17_48864230_+ENSG00000136436.13ENST00000258947hsa-miR-548aj-3p48864228488642347mer-m84886421548864235141.00-8.37
CAediting_1210300chr17_48864230_+ENSG00000136436.13ENST00000258947hsa-miR-548aj-3p48864228488642347mer-m84886421548864235141.00-8.37
CAediting_1210300chr17_48864230_+ENSG00000136436.13ENST00000258947hsa-miR-548am-3p48864228488642347mer-m84886421348864235143.00-11.23
CAediting_1210300chr17_48864230_+ENSG00000136436.13ENST00000258947hsa-miR-548aq-3p48864228488642347mer-m84886421448864235141.00-11.55
CAediting_1210300chr17_48864230_+ENSG00000136436.13ENST00000258947hsa-miR-548j-3p48864228488642347mer-m84886421548864235141.00-11.66
CAediting_1210300chr17_48864230_+ENSG00000136436.13ENST00000258947hsa-miR-548x-3p48864228488642347mer-m84886421648864235141.00-8.37
CAediting_1210300chr17_48864230_+ENSG00000136436.13ENST00000258947hsa-miR-548x-3p48864228488642347mer-m84886421648864235141.00-8.37
CAediting_1210300chr17_48864230_+ENSG00000136436.13ENST00000258947hsa-miR-7844-5p48864226488642327mer-m84886421448864233153.00-13.12
CAediting_1210313chr17_48864338_+ENSG00000136436.13ENST00000258947hsa-miR-106a-3p48864334488643407mer-1a4886431948864340141.00-16.54
CAediting_1210313chr17_48864338_+ENSG00000136436.13ENST00000258947hsa-miR-432748864336488643427mer-m84886432548864343140.00-12.39
CAediting_1210316chr17_48864347_+ENSG00000136436.13ENST00000258947hsa-miR-66248864342488643476mer4886432648864348153.00-32.78
CAediting_1210316chr17_48864347_+ENSG00000136436.13ENST00000258947hsa-miR-663b48864345488643517mer-m84886433148864352147.00-21.17

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1210304chr17_48864253_+ENSG00000136436.13ENST00000258947hsa-miR-10a-5p48864250488642567mer-m84886423548864257145-13.67
CAediting_1210304chr17_48864253_+ENSG00000136436.13ENST00000258947hsa-miR-10b-5p48864250488642567mer-m84886423548864257140-12.49
CAediting_1210292chr17_48864189_+ENSG00000136436.13ENST00000258947hsa-miR-1212648864185488641928mer-1a4886416948864192143-12.83
CAediting_1210293chr17_48864190_+ENSG00000136436.13ENST00000258947hsa-miR-1212648864185488641928mer-1a4886416948864192143-12.83
CAediting_1210298chr17_48864219_+ENSG00000136436.13ENST00000258947hsa-miR-125648864216488642227mer-m84886420348864223147-15.44
CAediting_1210280chr17_48864105_+ENSG00000136436.13ENST00000258947hsa-miR-126248864102488641087mer-m84886408848864109140-17.9
CAediting_1210281chr17_48864109_+ENSG00000136436.13ENST00000258947hsa-miR-126248864102488641087mer-m84886408848864109140-17.9
CAediting_1210317chr17_48864351_+ENSG00000136436.13ENST00000258947hsa-miR-128-3p48864349488643557mer-m84886433648864356141-13.18
CAediting_1210317chr17_48864351_+ENSG00000136436.13ENST00000258947hsa-miR-128-3p48864349488643557mer-m84886433648864356141-13.18
CAediting_1210299chr17_48864225_+ENSG00000136436.13ENST00000258947hsa-miR-1285-3p48864219488642257mer-m84886420548864226140-14.76
CAediting_1210299chr17_48864225_+ENSG00000136436.13ENST00000258947hsa-miR-1285-3p48864219488642257mer-m84886420548864226140-14.76
CAediting_1210309chr17_48864303_+ENSG00000136436.13ENST00000258947hsa-miR-1288-5p48864300488643067mer-m84886428548864307142-12.65
CAediting_1210286chr17_48864141_+ENSG00000136436.13ENST00000258947hsa-miR-1537-5p48864139488641446mer4886412448864145142-16.24
CAediting_1210287chr17_48864143_+ENSG00000136436.13ENST00000258947hsa-miR-1537-5p48864139488641446mer4886412448864145142-16.24
CAediting_1210286chr17_48864141_+ENSG00000136436.13ENST00000258947hsa-miR-20b-3p48864137488641437mer-m84886412348864144147-13.2
CAediting_1210287chr17_48864143_+ENSG00000136436.13ENST00000258947hsa-miR-20b-3p48864137488641437mer-m84886412348864144147-13.2
CAediting_1210317chr17_48864351_+ENSG00000136436.13ENST00000258947hsa-miR-216a-3p48864349488643557mer-m84886433748864356152-19.56
CAediting_1210282chr17_48864121_+ENSG00000136436.13ENST00000258947hsa-miR-25-3p48864116488641227mer-m84886410048864123153-22.8
CAediting_1210283chr17_48864122_+ENSG00000136436.13ENST00000258947hsa-miR-25-3p48864116488641227mer-m84886410048864123153-22.8
CAediting_1210292chr17_48864189_+ENSG00000136436.13ENST00000258947hsa-miR-30b-3p48864182488641898mer-1a4886416848864189149-17.04
CAediting_1210299chr17_48864225_+ENSG00000136436.13ENST00000258947hsa-miR-3187-5p48864219488642257mer-m84886420648864226150-23.7
CAediting_1210306chr17_48864273_+ENSG00000136436.13ENST00000258947hsa-miR-3190-5p48864267488642737mer-m84886425548864274148-18.52
CAediting_1210282chr17_48864121_+ENSG00000136436.13ENST00000258947hsa-miR-32-5p48864116488641227mer-m84886410148864123147-12.85
CAediting_1210283chr17_48864122_+ENSG00000136436.13ENST00000258947hsa-miR-32-5p48864116488641227mer-m84886410148864123147-12.85
CAediting_1210305chr17_48864261_+ENSG00000136436.13ENST00000258947hsa-miR-3606-5p48864257488642637mer-m84886424348864264150-12.49
CAediting_1210282chr17_48864121_+ENSG00000136436.13ENST00000258947hsa-miR-363-3p48864116488641227mer-m84886410248864123155-17.99
CAediting_1210283chr17_48864122_+ENSG00000136436.13ENST00000258947hsa-miR-363-3p48864116488641227mer-m84886410248864123155-17.99
CAediting_1210292chr17_48864189_+ENSG00000136436.13ENST00000258947hsa-miR-3689a-3p48864182488641898mer-1a4886416748864189147-19.07
CAediting_1210292chr17_48864189_+ENSG00000136436.13ENST00000258947hsa-miR-3689b-3p48864182488641898mer-1a4886416748864189147-15.98
CAediting_1210292chr17_48864189_+ENSG00000136436.13ENST00000258947hsa-miR-3689c48864182488641898mer-1a4886416748864189147-15.98
CAediting_1210287chr17_48864143_+ENSG00000136436.13ENST00000258947hsa-miR-392948864141488641466mer4886412548864147143-25.24
CAediting_1210316chr17_48864347_+ENSG00000136436.13ENST00000258947hsa-miR-428448864343488643508mer-1a4886433348864350140-12.92
CAediting_1210304chr17_48864253_+ENSG00000136436.13ENST00000258947hsa-miR-442148864248488642547mer-m84886423448864255154-16.72
CAediting_1210278chr17_48864089_+ENSG00000136436.13ENST00000258947hsa-miR-452-5p48864086488640927mer-m84886407348864093164-14.11
CAediting_1210279chr17_48864091_+ENSG00000136436.13ENST00000258947hsa-miR-452-5p48864086488640927mer-m84886407348864093164-14.11
CAediting_1210310chr17_48864311_+ENSG00000136436.13ENST00000258947hsa-miR-4520-3p48864304488643107mer-m84886429148864311154-22.56
CAediting_1210277chr17_48864088_+ENSG00000136436.13ENST00000258947hsa-miR-4676-3p48864086488640927mer-m84886407248864093150-10.19
CAediting_1210278chr17_48864089_+ENSG00000136436.13ENST00000258947hsa-miR-4676-3p48864086488640927mer-m84886407248864093150-10.19
CAediting_1210279chr17_48864091_+ENSG00000136436.13ENST00000258947hsa-miR-4676-3p48864086488640927mer-m84886407248864093150-10.19
CAediting_1210302chr17_48864247_+ENSG00000136436.13ENST00000258947hsa-miR-4684-5p48864244488642507mer-m84886422948864251155-15.04
CAediting_1210303chr17_48864249_+ENSG00000136436.13ENST00000258947hsa-miR-4684-5p48864244488642507mer-m84886422948864251155-15.04
CAediting_1210280chr17_48864105_+ENSG00000136436.13ENST00000258947hsa-miR-4701-3p48864102488641087mer-m84886409048864109149-18.44
CAediting_1210281chr17_48864109_+ENSG00000136436.13ENST00000258947hsa-miR-4701-3p48864102488641087mer-m84886409048864109149-18.44
CAediting_1210310chr17_48864311_+ENSG00000136436.13ENST00000258947hsa-miR-4795-5p48864308488643158mer-1a4886429448864315149-10.68
CAediting_1210287chr17_48864143_+ENSG00000136436.13ENST00000258947hsa-miR-485-5p48864141488641477mer-m84886412748864148149-21.17
CAediting_1210299chr17_48864225_+ENSG00000136436.13ENST00000258947hsa-miR-5189-5p48864219488642257mer-m84886420348864226150-24.92
CAediting_1210306chr17_48864273_+ENSG00000136436.13ENST00000258947hsa-miR-548s48864266488642727mer-m84886424948864273146-13.11
CAediting_1210294chr17_48864193_+ENSG00000136436.13ENST00000258947hsa-miR-569048864190488641967mer-m84886417748864197145-16.74
CAediting_1210317chr17_48864351_+ENSG00000136436.13ENST00000258947hsa-miR-569348864347488643537mer-m84886433348864354150-20.48
CAediting_1210304chr17_48864253_+ENSG00000136436.13ENST00000258947hsa-miR-5699-3p48864248488642547mer-m84886423448864255153-18.62
CAediting_1210310chr17_48864311_+ENSG00000136436.13ENST00000258947hsa-miR-57348864309488643157mer-m84886429148864316154-18.22
CAediting_1210311chr17_48864316_+ENSG00000136436.13ENST00000258947hsa-miR-57348864309488643157mer-m84886429148864316154-18.22
CAediting_1210291chr17_48864174_+ENSG00000136436.13ENST00000258947hsa-miR-580-3p48864167488641737mer-m84886415148864174150-15.27
CAediting_1210299chr17_48864225_+ENSG00000136436.13ENST00000258947hsa-miR-61248864219488642257mer-m84886420348864226145-25.49
CAediting_1210281chr17_48864109_+ENSG00000136436.13ENST00000258947hsa-miR-66148864105488641117mer-m84886408948864112147-18.47
CAediting_1210280chr17_48864105_+ENSG00000136436.13ENST00000258947hsa-miR-6736-5p48864102488641087mer-m84886408948864109143-19.43
CAediting_1210281chr17_48864109_+ENSG00000136436.13ENST00000258947hsa-miR-6736-5p48864102488641087mer-m84886408948864109143-19.43
CAediting_1210281chr17_48864109_+ENSG00000136436.13ENST00000258947hsa-miR-6742-3p48864104488641107mer-m84886409248864111140-13.49
CAediting_1210292chr17_48864189_+ENSG00000136436.13ENST00000258947hsa-miR-6779-5p48864182488641898mer-1a4886417048864189147-19.77
CAediting_1210292chr17_48864189_+ENSG00000136436.13ENST00000258947hsa-miR-6780a-5p48864182488641898mer-1a4886416648864189152-23.85
CAediting_1210303chr17_48864249_+ENSG00000136436.13ENST00000258947hsa-miR-6818-3p48864246488642527mer-m84886423348864253146-17.27
CAediting_1210304chr17_48864253_+ENSG00000136436.13ENST00000258947hsa-miR-6818-3p48864246488642527mer-m84886423348864253146-17.27
CAediting_1210310chr17_48864311_+ENSG00000136436.13ENST00000258947hsa-miR-6849-5p48864307488643126mer4886429248864313143-28.16
CAediting_1210299chr17_48864225_+ENSG00000136436.13ENST00000258947hsa-miR-686048864219488642257mer-m84886420548864226148-21.27
CAediting_1210287chr17_48864143_+ENSG00000136436.13ENST00000258947hsa-miR-6884-5p48864141488641477mer-m84886412648864148148-20.82
CAediting_1210312chr17_48864326_+ENSG00000136436.13ENST00000258947hsa-miR-7850-5p48864319488643257mer-m84886430448864326144-15.83
CAediting_1210286chr17_48864141_+ENSG00000136436.13ENST00000258947hsa-miR-797448864140488641456mer4886412248864146145-25.03
CAediting_1210287chr17_48864143_+ENSG00000136436.13ENST00000258947hsa-miR-797448864140488641456mer4886412248864146145-25.03
CAediting_1210295chr17_48864200_+ENSG00000136436.13ENST00000258947hsa-miR-797748864193488641997mer-m84886418348864200142-12.93
CAediting_1210279chr17_48864091_+ENSG00000136436.13ENST00000258947hsa-miR-873-3p48864089488640957mer-m84886407548864096142-12.9
CAediting_1210292chr17_48864189_+ENSG00000136436.13ENST00000258947hsa-miR-887-5p48864183488641897mer-m84886417048864190142-16.26
CAediting_1210293chr17_48864190_+ENSG00000136436.13ENST00000258947hsa-miR-887-5p48864183488641897mer-m84886417048864190142-16.26
CAediting_1210277chr17_48864088_+ENSG00000136436.13ENST00000258947hsa-miR-892c-3p48864086488640927mer-m84886407248864093145-8.78
CAediting_1210278chr17_48864089_+ENSG00000136436.13ENST00000258947hsa-miR-892c-3p48864086488640927mer-m84886407248864093145-8.78
CAediting_1210279chr17_48864091_+ENSG00000136436.13ENST00000258947hsa-miR-892c-3p48864086488640927mer-m84886407248864093145-8.78
CAediting_1210286chr17_48864141_+ENSG00000136436.13ENST00000258947hsa-miR-92148864134488641407mer-m84886411648864141150-15.25
CAediting_1210282chr17_48864121_+ENSG00000136436.13ENST00000258947hsa-miR-92a-3p48864116488641227mer-m84886410648864123150-24.62
CAediting_1210283chr17_48864122_+ENSG00000136436.13ENST00000258947hsa-miR-92a-3p48864116488641227mer-m84886410648864123150-24.62
CAediting_1210282chr17_48864121_+ENSG00000136436.13ENST00000258947hsa-miR-92a-3p48864116488641227mer-m84886410648864123150-24.62
CAediting_1210283chr17_48864122_+ENSG00000136436.13ENST00000258947hsa-miR-92a-3p48864116488641227mer-m84886410648864123150-24.62
CAediting_1210282chr17_48864121_+ENSG00000136436.13ENST00000258947hsa-miR-92b-3p48864116488641227mer-m84886410148864123152-21.35
CAediting_1210283chr17_48864122_+ENSG00000136436.13ENST00000258947hsa-miR-92b-3p48864116488641227mer-m84886410148864123152-21.35
CAediting_1210285chr17_48864134_+ENSG00000136436.13ENST00000258947hsa-miR-937-5p48864131488641377mer-m84886412048864138143-18.8

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_688081chr9_63819627_+ENSG00000136436.13ENST00000258947hsa-miR-4477b48864659488646657mer-m84886464548864666142-12.06
CAediting_1229414chr17_67471546_+ENSG00000136436.13ENST00000258947hsa-miR-548aa48863873488638797mer-m84886385348863880150-9.05
CAediting_442554chr5_154685830_+ENSG00000136436.13ENST00000258947hsa-miR-130348864766488647727mer-m84886475248864773152-12.61
CAediting_442554chr5_154685830_+ENSG00000136436.13ENST00000258947hsa-miR-130348863461488634688mer-1a4886344748863468143-14.68
CAediting_468389chr6_31355314_-ENSG00000136436.13ENST00000448105hsa-miR-6891-5p48863438488634458mer-1a4886342548863445148-21.38
CAediting_1524209chrX_134546392_-ENSG00000136436.13ENST00000448105hsa-miR-503-5p48863182488631887mer-1a4886316648863188141-28.62
CAediting_1524209chrX_134546392_-ENSG00000136436.13ENST00000508679hsa-miR-503-5p48863182488631887mer-1a4886316648863188141-28.62
CAediting_468389chr6_31355314_-ENSG00000136436.13ENST00000258947hsa-miR-6891-5p48863438488634458mer-1a4886342548863445148-21.38
CAediting_1524209chrX_134546392_-ENSG00000136436.13ENST00000258947hsa-miR-503-5p48863182488631887mer-1a4886316648863188141-28.62
CAediting_1524209chrX_134546392_-ENSG00000136436.13ENST00000507306hsa-miR-503-5p48863182488631887mer-1a4886316648863188141-28.62

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_228905chr2_188297554_+ENSG00000136436.13ENST00000258947hsa-miR-561-3p48864582488645887mer-m84886456848864589140-6.44

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CALCOCO2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for CALCOCO2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
LGGCAediting_1210286chr17_48864141_+..0.04245973696639760.0938338150512808..
BRCACAediting_1210286chr17_48864141_+..0.00119240273469260.141197575701034..
LUADCAediting_1210286chr17_48864141_+....0.02192212487429020.212643586395641
STADCAediting_1210286chr17_48864141_+..3.5707765671959e-060.324950539586333..
THCACAediting_1210286chr17_48864141_+0.03276016051199330.131703726907625....
ESCACAediting_1210286chr17_48864141_+..0.003206529801863470.297841883670837..
SKCMCAediting_1210286chr17_48864141_+....0.008761813985901350.220771605455508
STADCAediting_1210289chr17_48864164_+..0.0306535933775320.249817118218757..
LGGCAediting_1210301chr17_48864244_+..0.002223669992806280.325547904636354..
LGGCAediting_1210302chr17_48864247_+0.02546253325044060.162950041417468....
BRCACAediting_1210302chr17_48864247_+..6.71727399929176e-060.374040475175771..
THCACAediting_1210302chr17_48864247_+..0.01978102903715140.297744267091889..
BRCACAediting_1210304chr17_48864253_+..0.003803561324759260.263372873782201..
STADCAediting_1210304chr17_48864253_+..9.43325610675453e-050.348838227961605..
ESCACAediting_1210304chr17_48864253_+....0.000189677158722930.460284831578511
BRCACAediting_1210311chr17_48864316_+..0.008555526132327630.139950795967013..
LUADCAediting_1210311chr17_48864316_+0.03304203980090660.226206452098223..0.04052460448706670.21759295351722
STADCAediting_1210311chr17_48864316_+..3.01490679628706e-090.395742996130438..
KIRCCAediting_1210311chr17_48864316_+0.02764631350355520.146839054635111....
ESCACAediting_1210311chr17_48864316_+..0.001874846456079760.318302134898654..
OVCAediting_1210311chr17_48864316_+....0.04826318409008060.184604308177951
PCPGCAediting_1210311chr17_48864316_+..0.005387552304458370.322527415733723..
KIRCCAediting_1210318chr17_48865260_+0.0187510483996560.278349895804915....
KIRCCAediting_1210320chr17_48865264_+0.04501475114378220.218025385025272....
BRCACAediting_1210322chr17_48865272_+0.001832679085475940.324081508842722....
STADCAediting_1210345chr17_48865439_+..0.04201360183902710.206901493597872..
STADCAediting_1210352chr17_48865493_+0.007052863021358140.333657900566792....
BRCACAediting_1210358chr17_48865848_+0.001288335727593490.308606520505102....
STADCAediting_1210358chr17_48865848_+0.006839086402596810.272912808422538....

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Relation with cancer stages for CALCOCO2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
HNSCclinical_stageCAediting_1210311chr17_48864316_+0.004956468406723230.311207207554895
HNSCpathologic_stageCAediting_1210311chr17_48864316_+0.002821842235820770.356781710264601
KIRCpathologic_stageCAediting_1210322chr17_48865272_+0.0279852880460241-0.210543630796068
LIHCpathologic_stageCAediting_1210286chr17_48864141_+0.02875229511260120.231915552792211

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Relation with survival for CALCOCO2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
LGGCAediting_1210286chr17_48864141_+0.04976660180232360.004472250.0340403
LGGCAediting_1210301chr17_48864244_+0.006710591807823740.02544358.66808e+11
LUSCCAediting_1210286chr17_48864141_+0.0007415598651312470.006755618733.65
KIRCCAediting_1210318chr17_48865260_+0.004551716440866380.023313840.7415

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RelatedDrugs for CALCOCO2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for CALCOCO2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
CALCOCO2C0009402Colorectal Carcinoma1CTD_human
CALCOCO2C0009404Colorectal Neoplasms1CTD_human