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Editing gene: CEBPB-AS1 (CAeditome ID:101927559)

Gene summary for CEBPB-AS1

Gene summary

Gene information	Gene symbol	CEBPB-AS1
	Gene ID	101927559
	Gene name	CEBPB antisense RNA 1
	Synonyms	-
	Cytomap	20q13.13
	Type of gene	ncRNA
	Description	-
	Modification date	20210518
	UniProtAcc	.
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for CEBPB-AS1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000277449.1

RNA A-to-I editing events in Cancer.

CAediting_1437603(50184697, -), CAediting_1437604(50184714, -), CAediting_1437605(50184793, -), CAediting_1437606(50184799, -), CAediting_1437607(50184810, -), CAediting_1437608(50184850, -), CAediting_1437609(50184855, -), CAediting_1437610(50184856, -), CAediting_1437611(50184861, -), CAediting_1437612(50184864, -), CAediting_1437613(50184884, -), CAediting_1437614(50184893, -), CAediting_1437615(50184896, -), CAediting_1437616(50184899, -), CAediting_1437617(50184903, -), CAediting_1437618(50184916, -), CAediting_1437619(50184928, -), CAediting_1437620(50184936, -), CAediting_1437621(50184952, -), CAediting_1437622(50184961, -), CAediting_1437623(50184965, -), CAediting_1437624(50184966, -), CAediting_1437625(50184967, -), CAediting_1437626(50184981, -), CAediting_1437627(50184982, -), CAediting_1437628(50184989, -), CAediting_1437629(50185314, -), CAediting_1437630(50185349, -), CAediting_1437631(50185350, -), CAediting_1437632(50185356, -), CAediting_1437633(50185380, -), CAediting_1437634(50185408, -), CAediting_1437635(50185416, -), CAediting_1437636(50185421, -), CAediting_1437637(50185422, -), CAediting_1437638(50185428, -), CAediting_1437639(50185444, -), CAediting_1437640(50185484, -), CAediting_1437641(50185563, -), CAediting_1437642(50185579, -), CAediting_1437643(50185581, -), CAediting_1437644(50185585, -), CAediting_1437645(50185831, -), CAediting_1437646(50185843, -), CAediting_1437647(50185855, -), CAediting_1437648(50185859, -), CAediting_1437649(50185869, -), CAediting_1437650(50185875, -), CAediting_1437651(50185877, -), CAediting_1437652(50185890, -), CAediting_1437653(50185891, -), CAediting_1437654(50185898, -), CAediting_1437655(50185899, -), CAediting_1437656(50185904, -), CAediting_1437657(50185912, -), CAediting_1437658(50185917, -), CAediting_1437659(50185937, -), CAediting_1437660(50185942, -), CAediting_1437661(50185952, -), CAediting_1437662(50185955, -), CAediting_1437663(50185961, -), CAediting_1437664(50185982, -),

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RNA editing positional annotations for CEBPB-AS1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1437603	chr20_50184697_-	ncRNA_exonic
CAediting_1437604	chr20_50184714_-	ncRNA_exonic
CAediting_1437605	chr20_50184793_-	ncRNA_exonic
CAediting_1437606	chr20_50184799_-	ncRNA_exonic
CAediting_1437607	chr20_50184810_-	ncRNA_exonic
CAediting_1437608	chr20_50184850_-	ncRNA_exonic
CAediting_1437609	chr20_50184855_-	ncRNA_exonic
CAediting_1437610	chr20_50184856_-	ncRNA_exonic
CAediting_1437611	chr20_50184861_-	ncRNA_exonic
CAediting_1437612	chr20_50184864_-	ncRNA_exonic
CAediting_1437613	chr20_50184884_-	ncRNA_exonic
CAediting_1437614	chr20_50184893_-	ncRNA_exonic
CAediting_1437615	chr20_50184896_-	ncRNA_exonic
CAediting_1437616	chr20_50184899_-	ncRNA_exonic
CAediting_1437617	chr20_50184903_-	ncRNA_exonic
CAediting_1437618	chr20_50184916_-	ncRNA_exonic
CAediting_1437619	chr20_50184928_-	ncRNA_exonic
CAediting_1437620	chr20_50184936_-	ncRNA_exonic
CAediting_1437621	chr20_50184952_-	ncRNA_exonic
CAediting_1437622	chr20_50184961_-	ncRNA_exonic
CAediting_1437623	chr20_50184965_-	ncRNA_exonic
CAediting_1437624	chr20_50184966_-	ncRNA_exonic
CAediting_1437625	chr20_50184967_-	ncRNA_exonic
CAediting_1437626	chr20_50184981_-	ncRNA_exonic
CAediting_1437627	chr20_50184982_-	ncRNA_exonic
CAediting_1437628	chr20_50184989_-	ncRNA_exonic
CAediting_1437629	chr20_50185314_-	ncRNA_exonic
CAediting_1437630	chr20_50185349_-	ncRNA_exonic
CAediting_1437631	chr20_50185350_-	ncRNA_exonic
CAediting_1437632	chr20_50185356_-	ncRNA_exonic
CAediting_1437633	chr20_50185380_-	ncRNA_exonic
CAediting_1437634	chr20_50185408_-	ncRNA_exonic
CAediting_1437635	chr20_50185416_-	ncRNA_exonic
CAediting_1437636	chr20_50185421_-	ncRNA_exonic
CAediting_1437637	chr20_50185422_-	ncRNA_exonic
CAediting_1437638	chr20_50185428_-	ncRNA_exonic
CAediting_1437639	chr20_50185444_-	ncRNA_exonic
CAediting_1437640	chr20_50185484_-	ncRNA_exonic
CAediting_1437641	chr20_50185563_-	ncRNA_exonic
CAediting_1437642	chr20_50185579_-	ncRNA_exonic
CAediting_1437643	chr20_50185581_-	ncRNA_exonic
CAediting_1437644	chr20_50185585_-	ncRNA_exonic
CAediting_1437645	chr20_50185831_-	ncRNA_exonic
CAediting_1437646	chr20_50185843_-	ncRNA_exonic
CAediting_1437647	chr20_50185855_-	ncRNA_exonic
CAediting_1437648	chr20_50185859_-	ncRNA_exonic
CAediting_1437649	chr20_50185869_-	ncRNA_exonic
CAediting_1437650	chr20_50185875_-	ncRNA_exonic
CAediting_1437651	chr20_50185877_-	ncRNA_exonic
CAediting_1437652	chr20_50185890_-	ncRNA_exonic
CAediting_1437653	chr20_50185891_-	ncRNA_exonic
CAediting_1437654	chr20_50185898_-	ncRNA_exonic
CAediting_1437655	chr20_50185899_-	ncRNA_exonic
CAediting_1437656	chr20_50185904_-	ncRNA_exonic
CAediting_1437657	chr20_50185912_-	ncRNA_exonic
CAediting_1437658	chr20_50185917_-	ncRNA_exonic
CAediting_1437659	chr20_50185937_-	ncRNA_exonic
CAediting_1437660	chr20_50185942_-	ncRNA_exonic
CAediting_1437661	chr20_50185952_-	ncRNA_exonic
CAediting_1437662	chr20_50185955_-	ncRNA_exonic
CAediting_1437663	chr20_50185961_-	ncRNA_exonic
CAediting_1437664	chr20_50185982_-	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1437603	chr20_50184697_-	LINE	L1	L1MA5
CAediting_1437604	chr20_50184714_-	LINE	L1	L1MA5
CAediting_1437605	chr20_50184793_-	SINE	Alu	AluSx
CAediting_1437606	chr20_50184799_-	SINE	Alu	AluSx
CAediting_1437607	chr20_50184810_-	SINE	Alu	AluSx
CAediting_1437608	chr20_50184850_-	SINE	Alu	AluSx
CAediting_1437609	chr20_50184855_-	SINE	Alu	AluSx
CAediting_1437610	chr20_50184856_-	SINE	Alu	AluSx
CAediting_1437611	chr20_50184861_-	SINE	Alu	AluSx
CAediting_1437612	chr20_50184864_-	SINE	Alu	AluSx
CAediting_1437613	chr20_50184884_-	SINE	Alu	AluSx
CAediting_1437614	chr20_50184893_-	SINE	Alu	AluSx
CAediting_1437615	chr20_50184896_-	SINE	Alu	AluSx
CAediting_1437616	chr20_50184899_-	SINE	Alu	AluSx
CAediting_1437617	chr20_50184903_-	SINE	Alu	AluSx
CAediting_1437618	chr20_50184916_-	SINE	Alu	AluSx
CAediting_1437619	chr20_50184928_-	SINE	Alu	AluSx
CAediting_1437620	chr20_50184936_-	SINE	Alu	AluSx
CAediting_1437621	chr20_50184952_-	SINE	Alu	AluSx
CAediting_1437622	chr20_50184961_-	SINE	Alu	AluSx
CAediting_1437623	chr20_50184965_-	SINE	Alu	AluSx
CAediting_1437624	chr20_50184966_-	SINE	Alu	AluSx
CAediting_1437625	chr20_50184967_-	SINE	Alu	AluSx
CAediting_1437626	chr20_50184981_-	SINE	Alu	AluSx
CAediting_1437627	chr20_50184982_-	SINE	Alu	AluSx
CAediting_1437628	chr20_50184989_-	SINE	Alu	AluSx
CAediting_1437629	chr20_50185314_-	SINE	Alu	AluSz
CAediting_1437630	chr20_50185349_-	SINE	Alu	AluSz
CAediting_1437631	chr20_50185350_-	SINE	Alu	AluSz
CAediting_1437632	chr20_50185356_-	SINE	Alu	AluSz
CAediting_1437633	chr20_50185380_-	SINE	Alu	AluSz
CAediting_1437634	chr20_50185408_-	SINE	Alu	AluSz
CAediting_1437635	chr20_50185416_-	SINE	Alu	AluSz
CAediting_1437636	chr20_50185421_-	SINE	Alu	AluSz
CAediting_1437637	chr20_50185422_-	SINE	Alu	AluSz
CAediting_1437638	chr20_50185428_-	SINE	Alu	AluSz
CAediting_1437639	chr20_50185444_-	SINE	Alu	AluSz
CAediting_1437640	chr20_50185484_-	SINE	Alu	AluSz
CAediting_1437641	chr20_50185563_-	SINE	Alu	AluSz
CAediting_1437642	chr20_50185579_-	SINE	Alu	AluSz
CAediting_1437643	chr20_50185581_-	SINE	Alu	AluSz
CAediting_1437644	chr20_50185585_-	SINE	Alu	AluSz
CAediting_1437645	chr20_50185831_-	SINE	Alu	AluJb
CAediting_1437646	chr20_50185843_-	SINE	Alu	AluJb
CAediting_1437647	chr20_50185855_-	SINE	Alu	AluJb
CAediting_1437648	chr20_50185859_-	SINE	Alu	AluJb
CAediting_1437649	chr20_50185869_-	SINE	Alu	AluJb
CAediting_1437650	chr20_50185875_-	SINE	Alu	AluJb
CAediting_1437651	chr20_50185877_-	SINE	Alu	AluJb
CAediting_1437652	chr20_50185890_-	SINE	Alu	AluJb
CAediting_1437653	chr20_50185891_-	SINE	Alu	AluJb
CAediting_1437654	chr20_50185898_-	SINE	Alu	AluJb
CAediting_1437655	chr20_50185899_-	SINE	Alu	AluJb
CAediting_1437656	chr20_50185904_-	SINE	Alu	AluJb
CAediting_1437657	chr20_50185912_-	SINE	Alu	AluJb
CAediting_1437658	chr20_50185917_-	SINE	Alu	AluJb
CAediting_1437659	chr20_50185937_-	SINE	Alu	AluJb
CAediting_1437660	chr20_50185942_-	SINE	Alu	AluJb
CAediting_1437661	chr20_50185952_-	SINE	Alu	AluJb
CAediting_1437662	chr20_50185955_-	SINE	Alu	AluJb
CAediting_1437663	chr20_50185961_-	SINE	Alu	AluJb
CAediting_1437664	chr20_50185982_-	SINE	Alu	AluJb

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RNA A-to-I editing events in the alternative splicing sites for CEBPB-AS1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000277449.1.CEBPB-AS1.

Correlation between RNA A-to-I editing and PSI for ENSG00000277449.1.CEBPB-AS1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CEBPB-AS1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CEBPB-AS1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for CEBPB-AS1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1437611	chr20_50184861_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-639	50184860	50184866	7mer-m8	50184859	50184881	153	-20.02
CAediting_1437623	chr20_50184965_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-630	50184959	50184966	8mer-1a	50184959	50184979	158	-15.14
CAediting_1437624	chr20_50184966_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-325	50184965	50184972	8mer-1a	50184965	50184987	141	-10.26
CAediting_1437625	chr20_50184967_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-222-5p	50184965	50184972	8mer-1a	50184965	50184986	140	-9.13
CAediting_1437625	chr20_50184967_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-30a-3p	50184963	50184970	8mer-1a	50184963	50184987	150	-12.52
CAediting_1437625	chr20_50184967_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-30d-3p	50184963	50184970	8mer-1a	50184963	50184985	149	-12.11
CAediting_1437625	chr20_50184967_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-30e-3p	50184963	50184970	8mer-1a	50184963	50184987	150	-14.55
CAediting_1437625	chr20_50184967_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-936	50184966	50184973	8mer-1a	50184966	50184988	159	-22.47
CAediting_1437632	chr20_50185356_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-324-3p	50185356	50185362	7mer-m8	50185355	50185377	145	-24.59
CAediting_1437632	chr20_50185356_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6075	50185351	50185358	8mer-1a	50185351	50185372	150	-25.04
CAediting_1437636	chr20_50185421_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-8052	50185416	50185422	7mer-1a	50185416	50185436	149	-27.24
CAediting_1437637	chr20_50185422_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-638	50185416	50185422	7mer-1a	50185416	50185440	147	-28.23
CAediting_1437651	chr20_50185877_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-4746-5p	50185877	50185883	7mer-m8	50185876	50185898	150	-21.67
CAediting_1437652	chr20_50185890_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6852-5p	50185889	50185894	6mer	50185888	50185908	140	-22.39
CAediting_1437653	chr20_50185891_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6771-5p	50185890	50185896	7mer-m8	50185889	50185910	145	-29.62
CAediting_1437654	chr20_50185898_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-3929	50185895	50185901	7mer-m8	50185894	50185916	165	-24.87
CAediting_1437654	chr20_50185898_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-4478	50185895	50185901	7mer-m8	50185894	50185910	155	-27.09
CAediting_1437654	chr20_50185898_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-485-5p	50185894	50185900	7mer-m8	50185893	50185915	149	-16.49
CAediting_1437654	chr20_50185898_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6884-5p	50185894	50185900	7mer-m8	50185893	50185913	157	-21.18
CAediting_1437654	chr20_50185898_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-7160-5p	50185897	50185903	7mer-m8	50185896	50185916	150	-19.69
CAediting_1437654	chr20_50185898_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-7162-3p	50185898	50185904	7mer-m8	50185897	50185915	152	-18.37
CAediting_1437656	chr20_50185904_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6765-5p	50185898	50185905	8mer-1a	50185898	50185919	153	-27.52
CAediting_1437658	chr20_50185917_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-615-3p	50185916	50185922	7mer-m8	50185915	50185936	148	-21.49
CAediting_1437606	chr20_50184799_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-375-3p	50184793	50184800	8mer-1a	50184793	50184814	150	-12.78
CAediting_1437608	chr20_50184850_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-4634	50184845	50184852	8mer-1a	50184845	50184865	144	-17.5
CAediting_1437610	chr20_50184856_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-4638-5p	50184853	50184860	8mer-1a	50184853	50184874	148	-17.53
CAediting_1437613	chr20_50184884_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-3155a	50184880	50184886	7mer-m8	50184879	50184897	145	-24.35
CAediting_1437613	chr20_50184884_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-3155b	50184880	50184886	7mer-m8	50184879	50184894	145	-23.45
CAediting_1437613	chr20_50184884_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-484	50184880	50184886	7mer-m8	50184879	50184905	150	-24.63
CAediting_1437615	chr20_50184896_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6752-3p	50184896	50184902	7mer-m8	50184895	50184914	157	-30.29
CAediting_1437615	chr20_50184896_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6801-3p	50184894	50184901	8mer-1a	50184894	50184913	148	-22.9
CAediting_1437615	chr20_50184896_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6810-3p	50184894	50184901	8mer-1a	50184894	50184916	151	-28.6
CAediting_1437617	chr20_50184903_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-1913	50184898	50184904	7mer-m8	50184897	50184918	147	-22.1
CAediting_1437617	chr20_50184903_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6849-3p	50184903	50184909	7mer-m8	50184902	50184923	140	-18.03
CAediting_1437618	chr20_50184916_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-1207-3p	50184916	50184922	7mer-m8	50184915	50184931	145	-12.96
CAediting_1437618	chr20_50184916_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-646	50184914	50184920	7mer-m8	50184913	50184931	147	-17.24
CAediting_1437620	chr20_50184936_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-767-5p	50184935	50184941	7mer-m8	50184934	50184954	148	-22.42
CAediting_1437622	chr20_50184961_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-3680-3p	50184956	50184963	8mer-1a	50184956	50184978	140	-14.25
CAediting_1437626	chr20_50184981_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-4508	50184976	50184982	7mer-m8	50184975	50184990	141	-24.29
CAediting_1437626	chr20_50184981_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6754-3p	50184981	50184987	7mer-m8	50184980	50185000	154	-17.3
CAediting_1437626	chr20_50184981_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6837-3p	50184981	50184986	6mer	50184980	50185000	145	-18.79
CAediting_1437629	chr20_50185314_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-4790-5p	50185313	50185319	7mer-m8	50185312	50185331	158	-17.08
CAediting_1437631	chr20_50185350_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-4638-5p	50185349	50185356	8mer-1a	50185349	50185368	146	-20.28
CAediting_1437633	chr20_50185380_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-4437	50185377	50185383	7mer-m8	50185376	50185396	146	-19.54
CAediting_1437640	chr20_50185484_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-1229-3p	50185483	50185489	7mer-m8	50185482	50185506	146	-16.14
CAediting_1437640	chr20_50185484_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6511a-3p	50185483	50185490	8mer-1a	50185483	50185504	145	-15.78
CAediting_1437640	chr20_50185484_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6511b-3p	50185483	50185490	8mer-1a	50185483	50185505	140	-14.97
CAediting_1437643	chr20_50185581_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-191-3p	50185578	50185583	6mer	50185577	50185598	144	-34.94
CAediting_1437643	chr20_50185581_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6720-3p	50185579	50185586	8mer-1a	50185579	50185602	147	-18.94
CAediting_1437648	chr20_50185859_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-1268a	50185855	50185862	8mer-1a	50185855	50185872	164	-28.81
CAediting_1437648	chr20_50185859_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-1268b	50185855	50185862	8mer-1a	50185855	50185874	164	-28.81
CAediting_1437648	chr20_50185859_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-4486	50185854	50185860	7mer-m8	50185853	50185868	153	-28.71
CAediting_1437657	chr20_50185912_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-4751	50185907	50185913	7mer-m8	50185906	50185930	158	-25.25
CAediting_1437664	chr20_50185982_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-340-3p	50185981	50185987	7mer-m8	50185980	50186001	148	-20.67
CAediting_1437664	chr20_50185982_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6827-3p	50185981	50185987	7mer-m8	50185980	50186000	140	-14.58
CAediting_1437646	chr20_50185843_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-3613-3p	50185842	50185849	8mer-1a	50185842	50185865	140	-7.34
CAediting_1437604	chr20_50184714_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-1285-3p	50184708	50184715	8mer-1a	50184708	50184729	146	-19.72
CAediting_1437604	chr20_50184714_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-3187-5p	50184708	50184715	8mer-1a	50184708	50184730	141	-16.28
CAediting_1437604	chr20_50184714_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-5189-5p	50184708	50184715	8mer-1a	50184708	50184730	152	-23.37
CAediting_1437604	chr20_50184714_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-612	50184708	50184715	8mer-1a	50184708	50184729	147	-18.19
CAediting_1437604	chr20_50184714_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6860	50184708	50184715	8mer-1a	50184708	50184732	142	-18.23
CAediting_1437627	chr20_50184982_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-1229-3p	50184981	50184987	7mer-m8	50184980	50185001	144	-13.12

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1437636	chr20_50185421_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-10399-5p	50185420	50185426	7mer-m8	50185419	50185440	152	-14.89
CAediting_1437637	chr20_50185422_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-10399-5p	50185420	50185426	7mer-m8	50185419	50185440	152	-14.89
CAediting_1437662	chr20_50185955_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-1227-3p	50185954	50185960	7mer-m8	50185953	50185972	148	-22.88
CAediting_1437640	chr20_50185484_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-193b-5p	50185478	50185485	8mer-1a	50185478	50185499	142	-15.74
CAediting_1437626	chr20_50184981_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-193b-5p	50184977	50184983	7mer-m8	50184976	50184997	142	-19.47
CAediting_1437627	chr20_50184982_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-193b-5p	50184977	50184983	7mer-m8	50184976	50184997	142	-19.47
CAediting_1437616	chr20_50184899_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-1976	50184894	50184901	8mer-1a	50184894	50184914	149	-21.37
CAediting_1437615	chr20_50184896_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-1976	50184894	50184901	8mer-1a	50184894	50184914	149	-21.37
CAediting_1437603	chr20_50184697_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-2054	50184695	50184701	7mer-m8	50184694	50184718	154	-7.5
CAediting_1437650	chr20_50185875_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-210-5p	50185869	50185876	8mer-1a	50185869	50185894	141	-21.22
CAediting_1437641	chr20_50185563_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-3159	50185557	50185563	7mer-1a	50185557	50185578	140	-16.44
CAediting_1437660	chr20_50185942_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-3174	50185940	50185945	6mer	50185939	50185960	145	-23.96
CAediting_1437639	chr20_50185444_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-3187-3p	50185444	50185450	7mer-m8	50185443	50185462	140	-12.74
CAediting_1437644	chr20_50185585_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-3190-5p	50185584	50185590	7mer-m8	50185583	50185602	153	-28.67
CAediting_1437639	chr20_50185444_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-3190-5p	50185443	50185449	7mer-m8	50185442	50185461	140	-14.78
CAediting_1437607	chr20_50184810_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-3198	50184810	50184816	7mer-m8	50184809	50184830	140	-15.17
CAediting_1437658	chr20_50185917_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-3622a-3p	50185912	50185919	8mer-1a	50185912	50185933	148	-20.42
CAediting_1437659	chr20_50185937_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-3929	50185933	50185938	6mer	50185932	50185954	146	-28.61
CAediting_1437607	chr20_50184810_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-4309	50184810	50184816	7mer-m8	50184809	50184826	145	-14.94
CAediting_1437629	chr20_50185314_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-431-5p	50185310	50185316	7mer-m8	50185309	50185329	140	-16.67
CAediting_1437644	chr20_50185585_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-4435	50185585	50185591	7mer-m8	50185584	50185605	155	-22.42
CAediting_1437612	chr20_50184864_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-4772-3p	50184863	50184869	7mer-m8	50184862	50184884	154	-22.45
CAediting_1437636	chr20_50185421_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-5089-5p	50185416	50185422	7mer-m8	50185415	50185437	152	-16.11
CAediting_1437635	chr20_50185416_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-5089-5p	50185416	50185422	7mer-m8	50185415	50185437	152	-16.11
CAediting_1437643	chr20_50185581_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-550a-5p	50185579	50185586	8mer-1a	50185579	50185600	141	-19.3
CAediting_1437644	chr20_50185585_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-550a-5p	50185579	50185586	8mer-1a	50185579	50185600	141	-19.3
CAediting_1437643	chr20_50185581_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-550b-2-5p	50185579	50185585	7mer-m8	50185578	50185598	146	-17.79
CAediting_1437642	chr20_50185579_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-550b-2-5p	50185579	50185585	7mer-m8	50185578	50185598	146	-17.79
CAediting_1437647	chr20_50185855_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-5589-5p	50185853	50185859	7mer-m8	50185852	50185870	151	-20.45
CAediting_1437618	chr20_50184916_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-5697	50184912	50184918	7mer-m8	50184911	50184933	149	-13.02
CAediting_1437636	chr20_50185421_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6504-3p	50185420	50185426	7mer-m8	50185419	50185440	151	-17.09
CAediting_1437637	chr20_50185422_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6504-3p	50185420	50185426	7mer-m8	50185419	50185440	151	-17.09
CAediting_1437635	chr20_50185416_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6506-5p	50185415	50185421	7mer-m8	50185414	50185437	145	-17.75
CAediting_1437661	chr20_50185952_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6529-5p	50185947	50185953	7mer-m8	50185946	50185966	148	-17.2
CAediting_1437616	chr20_50184899_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6747-3p	50184896	50184903	8mer-1a	50184896	50184917	150	-24.11
CAediting_1437648	chr20_50185859_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6776-5p	50185854	50185860	7mer-m8	50185853	50185871	154	-21.51
CAediting_1437647	chr20_50185855_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6776-5p	50185854	50185860	7mer-m8	50185853	50185871	154	-21.51
CAediting_1437663	chr20_50185961_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6807-3p	50185959	50185964	6mer	50185958	50185982	148	-33.09
CAediting_1437663	chr20_50185961_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-7703	50185961	50185967	7mer-m8	50185960	50185982	152	-24.34
CAediting_1437614	chr20_50184893_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-8062	50184888	50184894	7mer-m8	50184887	50184907	141	-10.43
CAediting_1437606	chr20_50184799_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-8068	50184795	50184802	8mer-1a	50184795	50184816	154	-12.09

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229414	chr17_67471546_+	ENSG00000277449.1	ENST00000613921.1	hsa-miR-548aa	50188624	50189458	7mer-m8	50188623	50189476	141	-9.76
CAediting_442554	chr5_154685830_+	ENSG00000277449.1	ENST00000613921.1	hsa-miR-1303	50185298	50185304	7mer-1a	50185298	50185319	160	-32.15
CAediting_524911	chr7_5495852_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-589-3p	50186355	50186361	7mer-m8	50186354	50186373	152	-26.68

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_77128	chr1_85133844_+	ENSG00000277449.1	ENST00000613921.1	hsa-miR-4423-3p	50188580	50188586	7mer-m8	50188579	50188599	150	-16.1
CAediting_1054808	chr15_66496985_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-4512	50185661	50185667	7mer-m8	50185660	50185680	143	-21.36
CAediting_524911	chr7_5495852_-	ENSG00000277449.1	ENST00000613921.1	hsa-miR-589-3p	50187040	50187046	7mer-m8	50187039	50187062	140	-13.8
CAediting_580943	chr7_100356700_+	ENSG00000277449.1	ENST00000613921.1	hsa-miR-6840-3p	50186141	50186147	7mer-m8	50186140	50186163	143	-17.23

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for CEBPB-AS1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for CEBPB-AS1

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

Top

Relation with cancer stages for CEBPB-AS1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for CEBPB-AS1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for CEBPB-AS1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for CEBPB-AS1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene