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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: G3BP1 (CAeditome ID:10146)

Gene summary for G3BP1

check button Gene summary
Gene informationGene symbol

G3BP1

Gene ID

10146

Gene nameG3BP stress granule assembly factor 1
SynonymsG3BP|HDH-VIII
Cytomap

5q33.1

Type of geneprotein-coding
Descriptionras GTPase-activating protein-binding protein 1ATP-dependent DNA helicase VIIIDNA helicase VIIIG3BP-1GAP SH3 domain-binding protein 1GAP binding proteinGTPase activating protein (SH3 domain) binding protein 1Ras-GTPase-activating protein SH3-domain
Modification date20210518
UniProtAcc

Q13283

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
G3BP1

GO:0003678

Ras GTPase-activating protein-binding protein 1

9889278

G3BP1

GO:0003724

Ras GTPase-activating protein-binding protein 1

9889278

G3BP1

GO:0033677

Ras GTPase-activating protein-binding protein 1

9889278

G3BP1

GO:0032481

Ras GTPase-activating protein-binding protein 1

30804210

G3BP1

GO:0005737

Ras GTPase-activating protein-binding protein 1

30510222

G3BP1

GO:0005829

Ras GTPase-activating protein-binding protein 1

0000052

G3BP1

GO:0005829

Ras GTPase-activating protein-binding protein 1

20180778

G3BP1

GO:0010494

Ras GTPase-activating protein-binding protein 1

30404792


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RNA A-to-I events for G3BP1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000145907.13

check button RNA A-to-I editing events in Cancer.
CAediting_442284(151777608, +), CAediting_442285(151777647, +), CAediting_442286(151778861, +), CAediting_442287(151778901, +), CAediting_442288(151778954, +), CAediting_442289(151786972, +), CAediting_442290(151786982, +), CAediting_442291(151786984, +), CAediting_442292(151789009, +), CAediting_442293(151789049, +), CAediting_442294(151789188, +), CAediting_442295(151789202, +), CAediting_442296(151789210, +), CAediting_442297(151789241, +), CAediting_442298(151789247, +), CAediting_442299(151789310, +), CAediting_442300(151789319, +), CAediting_442301(151789321, +), CAediting_442302(151789913, +), CAediting_442303(151789919, +), CAediting_442304(151789925, +), CAediting_442305(151789946, +), CAediting_442306(151789992, +), CAediting_442307(151790052, +), CAediting_442308(151790071, +), CAediting_442309(151790150, +), CAediting_442310(151791688, +), CAediting_442311(151791737, +), CAediting_442312(151792626, +), CAediting_442313(151792629, +), CAediting_442314(151792665, +), CAediting_442315(151792705, +), CAediting_442316(151792729, +), CAediting_442317(151792746, +), CAediting_442318(151792751, +), CAediting_442319(151792824, +), CAediting_442320(151792829, +), CAediting_442321(151792853, +), CAediting_442322(151792862, +), CAediting_442323(151793140, +), CAediting_442324(151793715, +), CAediting_442325(151793739, +), CAediting_442326(151793773, +), CAediting_442327(151793787, +), CAediting_442328(151793791, +), CAediting_442329(151793893, +), CAediting_442330(151793903, +), CAediting_442331(151793910, +), CAediting_442332(151793916, +), CAediting_442333(151793920, +), CAediting_442334(151793934, +), CAediting_442335(151793959, +), CAediting_442336(151793998, +), CAediting_442337(151793999, +), CAediting_442338(151794995, +), CAediting_442339(151795022, +), CAediting_442340(151795023, +), CAediting_442341(151795111, +), CAediting_442342(151795134, +), CAediting_442343(151795146, +), CAediting_442344(151795155, +), CAediting_442345(151795260, +), CAediting_442346(151801834, +), CAediting_442347(151801901, +), CAediting_442348(151801944, +), CAediting_442349(151802022, +), CAediting_442350(151802079, +), CAediting_442351(151802670, +), CAediting_442352(151802679, +), CAediting_442353(151802839, +), CAediting_442354(151803328, +), CAediting_442355(151803538, +), CAediting_442356(151803546, +), CAediting_442357(151803623, +), CAediting_442358(151806824, +), CAediting_442359(151806854, +), CAediting_442360(151808921, +), CAediting_442361(151808922, +), CAediting_442362(151808927, +), CAediting_442363(151808976, +), CAediting_442364(151809036, +), CAediting_442365(151809048, +), CAediting_442366(151809073, +), CAediting_442367(151809101, +), CAediting_442368(151809160, +), CAediting_442369(151809192, +), CAediting_442370(151809194, +), CAediting_442371(151809200, +),

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RNA editing positional annotations for G3BP1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_442284chr5_151777608_+ncRNA_intronic
CAediting_442285chr5_151777647_+ncRNA_intronic
CAediting_442286chr5_151778861_+ncRNA_intronic
CAediting_442287chr5_151778901_+ncRNA_intronic
CAediting_442288chr5_151778954_+ncRNA_intronic
CAediting_442289chr5_151786972_+ncRNA_exonic
CAediting_442290chr5_151786982_+ncRNA_exonic
CAediting_442291chr5_151786984_+ncRNA_exonic
CAediting_442292chr5_151789009_+ncRNA_intronic
CAediting_442293chr5_151789049_+ncRNA_intronic
CAediting_442294chr5_151789188_+ncRNA_intronic
CAediting_442295chr5_151789202_+ncRNA_intronic
CAediting_442296chr5_151789210_+ncRNA_intronic
CAediting_442297chr5_151789241_+ncRNA_intronic
CAediting_442298chr5_151789247_+ncRNA_intronic
CAediting_442299chr5_151789310_+ncRNA_intronic
CAediting_442300chr5_151789319_+ncRNA_intronic
CAediting_442301chr5_151789321_+ncRNA_intronic
CAediting_442302chr5_151789913_+ncRNA_intronic
CAediting_442303chr5_151789919_+ncRNA_intronic
CAediting_442304chr5_151789925_+ncRNA_intronic
CAediting_442305chr5_151789946_+ncRNA_intronic
CAediting_442306chr5_151789992_+ncRNA_intronic
CAediting_442307chr5_151790052_+ncRNA_intronic
CAediting_442308chr5_151790071_+ncRNA_intronic
CAediting_442309chr5_151790150_+ncRNA_intronic
CAediting_442310chr5_151791688_+ncRNA_exonic
CAediting_442311chr5_151791737_+ncRNA_exonic
CAediting_442312chr5_151792626_+intronic
CAediting_442313chr5_151792629_+intronic
CAediting_442314chr5_151792665_+intronic
CAediting_442315chr5_151792705_+intronic
CAediting_442316chr5_151792729_+intronic
CAediting_442317chr5_151792746_+intronic
CAediting_442318chr5_151792751_+intronic
CAediting_442319chr5_151792824_+intronic
CAediting_442320chr5_151792829_+intronic
CAediting_442321chr5_151792853_+intronic
CAediting_442322chr5_151792862_+intronic
CAediting_442323chr5_151793140_+intronic
CAediting_442324chr5_151793715_+intronic
CAediting_442325chr5_151793739_+intronic
CAediting_442326chr5_151793773_+intronic
CAediting_442327chr5_151793787_+intronic
CAediting_442328chr5_151793791_+intronic
CAediting_442329chr5_151793893_+intronic
CAediting_442330chr5_151793903_+intronic
CAediting_442331chr5_151793910_+intronic
CAediting_442332chr5_151793916_+intronic
CAediting_442333chr5_151793920_+intronic
CAediting_442334chr5_151793934_+intronic
CAediting_442335chr5_151793959_+intronic
CAediting_442336chr5_151793998_+intronic
CAediting_442337chr5_151793999_+intronic
CAediting_442338chr5_151794995_+intronic
CAediting_442339chr5_151795022_+intronic
CAediting_442340chr5_151795023_+intronic
CAediting_442341chr5_151795111_+intronic
CAediting_442342chr5_151795134_+intronic
CAediting_442343chr5_151795146_+intronic
CAediting_442344chr5_151795155_+intronic
CAediting_442345chr5_151795260_+intronic
CAediting_442346chr5_151801834_+intronic
CAediting_442347chr5_151801901_+intronic
CAediting_442348chr5_151801944_+intronic
CAediting_442349chr5_151802022_+intronic
CAediting_442350chr5_151802079_+intronic
CAediting_442351chr5_151802670_+intronic
CAediting_442352chr5_151802679_+intronic
CAediting_442353chr5_151802839_+intronic
CAediting_442354chr5_151803328_+intronic
CAediting_442355chr5_151803538_+intronic
CAediting_442356chr5_151803546_+intronic
CAediting_442357chr5_151803623_+intronic
CAediting_442358chr5_151806824_+UTR3
CAediting_442359chr5_151806854_+UTR3
CAediting_442360chr5_151808921_+UTR3
CAediting_442361chr5_151808922_+UTR3
CAediting_442362chr5_151808927_+UTR3
CAediting_442363chr5_151808976_+UTR3
CAediting_442364chr5_151809036_+UTR3
CAediting_442365chr5_151809048_+UTR3
CAediting_442366chr5_151809073_+UTR3
CAediting_442367chr5_151809101_+UTR3
CAediting_442368chr5_151809160_+UTR3
CAediting_442369chr5_151809192_+UTR3
CAediting_442370chr5_151809194_+UTR3
CAediting_442371chr5_151809200_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_442284chr5_151777608_+SINEAluAluJo
CAediting_442285chr5_151777647_+SINEAluAluJo
CAediting_442286chr5_151778861_+SINEAluAluSz
CAediting_442287chr5_151778901_+SINEAluAluSz
CAediting_442288chr5_151778954_+SINEAluAluSz
CAediting_442289chr5_151786972_+SINEAluAluSx1
CAediting_442290chr5_151786982_+SINEAluAluSx1
CAediting_442291chr5_151786984_+SINEAluAluSx1
CAediting_442292chr5_151789009_+SINEAluAluSp
CAediting_442293chr5_151789049_+SINEAluAluSp
CAediting_442294chr5_151789188_+SINEAluAluSz6
CAediting_442295chr5_151789202_+SINEAluAluSz6
CAediting_442296chr5_151789210_+SINEAluAluSz6
CAediting_442297chr5_151789241_+SINEAluAluSz6
CAediting_442298chr5_151789247_+SINEAluAluSz6
CAediting_442299chr5_151789310_+SINEAluAluSz6
CAediting_442300chr5_151789319_+SINEAluAluSz6
CAediting_442301chr5_151789321_+SINEAluAluSz6
CAediting_442302chr5_151789913_+SINEAluAluJo
CAediting_442303chr5_151789919_+SINEAluAluJo
CAediting_442304chr5_151789925_+SINEAluAluJo
CAediting_442305chr5_151789946_+SINEAluAluJo
CAediting_442306chr5_151789992_+SINEAluAluJo
CAediting_442307chr5_151790052_+SINEAluAluJo
CAediting_442308chr5_151790071_+SINEAluAluJo
CAediting_442309chr5_151790150_+SINEAluAluJo
CAediting_442310chr5_151791688_+SINEAluAluSz
CAediting_442311chr5_151791737_+SINEAluAluSz
CAediting_442312chr5_151792626_+SINEAluAluJb
CAediting_442313chr5_151792629_+SINEAluAluJb
CAediting_442314chr5_151792665_+SINEAluAluJb
CAediting_442315chr5_151792705_+SINEAluAluJb
CAediting_442316chr5_151792729_+SINEAluAluJb
CAediting_442317chr5_151792746_+SINEAluAluJb
CAediting_442318chr5_151792751_+SINEAluAluJb
CAediting_442319chr5_151792824_+SINEAluAluJb
CAediting_442320chr5_151792829_+SINEAluAluJb
CAediting_442321chr5_151792853_+SINEAluAluJb
CAediting_442322chr5_151792862_+SINEAluAluJb
CAediting_442323chr5_151793140_+SINEAluAluSx
CAediting_442324chr5_151793715_+SINEAluAluJb
CAediting_442325chr5_151793739_+SINEAluAluJb
CAediting_442326chr5_151793773_+SINEAluAluJb
CAediting_442327chr5_151793787_+SINEAluAluJb
CAediting_442328chr5_151793791_+SINEAluAluJb
CAediting_442329chr5_151793893_+SINEAluAluJb
CAediting_442330chr5_151793903_+SINEAluAluJb
CAediting_442331chr5_151793910_+SINEAluAluJb
CAediting_442332chr5_151793916_+SINEAluAluJb
CAediting_442333chr5_151793920_+SINEAluAluJb
CAediting_442334chr5_151793934_+SINEAluAluJb
CAediting_442335chr5_151793959_+SINEAluAluJb
CAediting_442336chr5_151793998_+SINEAluAluJb
CAediting_442337chr5_151793999_+SINEAluAluJb
CAediting_442339chr5_151795022_+SINEAluAluY
CAediting_442340chr5_151795023_+SINEAluAluY
CAediting_442341chr5_151795111_+SINEAluAluY
CAediting_442342chr5_151795134_+SINEAluAluY
CAediting_442343chr5_151795146_+SINEAluAluY
CAediting_442344chr5_151795155_+SINEAluAluY
CAediting_442345chr5_151795260_+SINEAluAluY
CAediting_442346chr5_151801834_+SINEAluAluSx1
CAediting_442347chr5_151801901_+SINEAluAluSx1
CAediting_442348chr5_151801944_+SINEAluAluSx1
CAediting_442349chr5_151802022_+SINEAluAluSx1
CAediting_442350chr5_151802079_+SINEAluAluSx1
CAediting_442351chr5_151802670_+SINEAluAluY
CAediting_442352chr5_151802679_+SINEAluAluY
CAediting_442353chr5_151802839_+SINEAluAluY
CAediting_442354chr5_151803328_+SINEAluAluSx3
CAediting_442355chr5_151803538_+SINEAluAluSx3
CAediting_442356chr5_151803546_+SINEAluAluSx3
CAediting_442357chr5_151803623_+SINEAluAluSx3
CAediting_442358chr5_151806824_+SINEAluFLAM_A
CAediting_442359chr5_151806854_+SINEAluFLAM_A
CAediting_442360chr5_151808921_+SINEAluAluJr
CAediting_442361chr5_151808922_+SINEAluAluJr
CAediting_442362chr5_151808927_+SINEAluAluJr
CAediting_442363chr5_151808976_+SINEAluAluJr
CAediting_442364chr5_151809036_+SINEAluAluJr
CAediting_442365chr5_151809048_+SINEAluAluJr
CAediting_442366chr5_151809073_+SINEAluAluJr
CAediting_442367chr5_151809101_+SINEAluAluJr
CAediting_442368chr5_151809160_+SINEAluAluJr
CAediting_442369chr5_151809192_+SINEAluAluJr
CAediting_442370chr5_151809194_+SINEAluAluJr
CAediting_442371chr5_151809200_+SINEAluAluJr

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RNA A-to-I editing events in the alternative splicing sites for G3BP1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000145907.13.G3BP1.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000145907.13.G3BP1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for G3BP1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for G3BP1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for G3BP1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_442358chr5_151806824_+ENSG00000145907.13ENST00000394123hsa-miR-4725-5p1518068211518068277mer-m8151806808151806828145.00-19.89
CAediting_442358chr5_151806824_+ENSG00000145907.13ENST00000394123hsa-miR-504-5p1518068211518068277mer-m8151806806151806828146.00-20.59
CAediting_442358chr5_151806824_+ENSG00000145907.13ENST00000394123hsa-miR-6747-3p1518068181518068247mer-m8151806807151806825142.00-16.15
CAediting_442358chr5_151806824_+ENSG00000145907.13ENST00000394123hsa-miR-6752-3p1518068191518068257mer-m8151806806151806826154.00-15.50
CAediting_442359chr5_151806854_+ENSG00000145907.13ENST00000394123hsa-miR-43241518068481518068547mer-m8151806838151806855154.00-20.00
CAediting_442359chr5_151806854_+ENSG00000145907.13ENST00000394123hsa-miR-43291518068471518068537mer-m8151806836151806854145.00-20.09
CAediting_442360chr5_151808921_+ENSG00000145907.13ENST00000394123hsa-miR-513a-5p1518089151518089217mer-m8151808905151808922152.00-17.32
CAediting_442360chr5_151808921_+ENSG00000145907.13ENST00000394123hsa-miR-513a-5p1518089151518089217mer-m8151808905151808922152.00-17.32
CAediting_442360chr5_151808921_+ENSG00000145907.13ENST00000394123hsa-miR-6381518089201518089267mer-1a151808902151808926155.00-35.65
CAediting_442361chr5_151808922_+ENSG00000145907.13ENST00000394123hsa-miR-80521518089201518089267mer-1a151808908151808926148.00-29.06
CAediting_442362chr5_151808927_+ENSG00000145907.13ENST00000394123hsa-miR-181d-3p1518089231518089297mer-m8151808910151808930141.00-18.09
CAediting_442364chr5_151809036_+ENSG00000145907.13ENST00000394123hsa-miR-1228-3p1518090331518090397mer-m8151809021151809040163.00-25.13
CAediting_442364chr5_151809036_+ENSG00000145907.13ENST00000394123hsa-miR-6765-3p1518090311518090377mer-m8151809018151809038153.00-21.49
CAediting_442365chr5_151809048_+ENSG00000145907.13ENST00000394123hsa-miR-523-3p1518090431518090497mer-m8151809028151809050156.00-25.43
CAediting_442366chr5_151809073_+ENSG00000145907.13ENST00000394123hsa-miR-125a-5p1518090661518090727mer-m8151809050151809073145.00-19.18
CAediting_442366chr5_151809073_+ENSG00000145907.13ENST00000394123hsa-miR-125b-5p1518090661518090727mer-m8151809052151809073145.00-17.37
CAediting_442366chr5_151809073_+ENSG00000145907.13ENST00000394123hsa-miR-125b-5p1518090661518090727mer-m8151809052151809073145.00-17.37
CAediting_442366chr5_151809073_+ENSG00000145907.13ENST00000394123hsa-miR-39431518090701518090767mer-m8151809055151809077143.00-20.53
CAediting_442366chr5_151809073_+ENSG00000145907.13ENST00000394123hsa-miR-43131518090691518090757mer-m8151809057151809076146.00-21.10
CAediting_442366chr5_151809073_+ENSG00000145907.13ENST00000394123hsa-miR-43191518090661518090727mer-m8151809057151809073141.00-15.63
CAediting_442368chr5_151809160_+ENSG00000145907.13ENST00000394123hsa-miR-10a-5p1518091551518091617mer-m8151809141151809162151.00-20.50
CAediting_442368chr5_151809160_+ENSG00000145907.13ENST00000394123hsa-miR-10b-5p1518091551518091617mer-m8151809141151809162147.00-18.66
CAediting_442368chr5_151809160_+ENSG00000145907.13ENST00000394123hsa-miR-339-5p1518091541518091607mer-m8151809139151809161163.00-28.51
CAediting_442368chr5_151809160_+ENSG00000145907.13ENST00000394123hsa-miR-3620-3p1518091561518091638mer-1a151809141151809163154.00-28.12
CAediting_442368chr5_151809160_+ENSG00000145907.13ENST00000394123hsa-miR-6784-3p1518091581518091658mer-1a151809144151809165140.00-24.29
CAediting_442368chr5_151809160_+ENSG00000145907.13ENST00000394123hsa-miR-6862-3p1518091581518091658mer-1a151809141151809165153.00-21.21
CAediting_442368chr5_151809160_+ENSG00000145907.13ENST00000394123hsa-miR-6862-3p1518091581518091658mer-1a151809141151809165153.00-21.21

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_442360chr5_151808921_+ENSG00000145907.13ENST00000394123hsa-miR-10399-5p1518089161518089227mer-m8151808902151808923144-10.26
CAediting_442361chr5_151808922_+ENSG00000145907.13ENST00000394123hsa-miR-10399-5p1518089161518089227mer-m8151808902151808923144-10.26
CAediting_442367chr5_151809101_+ENSG00000145907.13ENST00000394123hsa-miR-10400-3p1518090941518091007mer-m8151809080151809101141-24.47
CAediting_442366chr5_151809073_+ENSG00000145907.13ENST00000394123hsa-miR-12001518090661518090727mer-m8151809054151809073145-19.05
CAediting_442358chr5_151806824_+ENSG00000145907.13ENST00000394123hsa-miR-1915-5p1518068191518068257mer-m8151806805151806826146-17.37
CAediting_442364chr5_151809036_+ENSG00000145907.13ENST00000394123hsa-miR-3126-3p1518090301518090367mer-m8151809016151809037146-17.86
CAediting_442358chr5_151806824_+ENSG00000145907.13ENST00000394123hsa-miR-3200-3p1518068201518068267mer-m8151806805151806827146-12.44
CAediting_442368chr5_151809160_+ENSG00000145907.13ENST00000394123hsa-miR-3664-5p1518091551518091617mer-m8151809144151809162151-17.47
CAediting_442363chr5_151808976_+ENSG00000145907.13ENST00000394123hsa-miR-372-5p1518089701518089778mer-1a151808955151808977140-11.92
CAediting_442359chr5_151806854_+ENSG00000145907.13ENST00000394123hsa-miR-45381518068511518068566mer151806835151806857142-24.46
CAediting_442367chr5_151809101_+ENSG00000145907.13ENST00000394123hsa-miR-46741518090941518091007mer-m8151809081151809101147-23.81
CAediting_442369chr5_151809192_+ENSG00000145907.13ENST00000394123hsa-miR-4735-5p1518091861518091938mer-1a151809172151809193140-4.39
CAediting_442361chr5_151808922_+ENSG00000145907.13ENST00000394123hsa-miR-5089-5p1518089201518089267mer-m8151808908151808927146-13.24
CAediting_442362chr5_151808927_+ENSG00000145907.13ENST00000394123hsa-miR-5089-5p1518089201518089267mer-m8151808908151808927146-13.24
CAediting_442369chr5_151809192_+ENSG00000145907.13ENST00000394123hsa-miR-576-5p1518091881518091958mer-1a151809174151809195152-6.45
CAediting_442370chr5_151809194_+ENSG00000145907.13ENST00000394123hsa-miR-576-5p1518091881518091958mer-1a151809174151809195152-6.45
CAediting_442362chr5_151808927_+ENSG00000145907.13ENST00000394123hsa-miR-6506-5p1518089211518089277mer-m8151808906151808928144-17.65
CAediting_442367chr5_151809101_+ENSG00000145907.13ENST00000394123hsa-miR-6783-3p1518090971518091037mer-m8151809083151809104151-24.69
CAediting_442366chr5_151809073_+ENSG00000145907.13ENST00000394123hsa-miR-6791-3p1518090691518090757mer-m8151809056151809076143-20.69
CAediting_442368chr5_151809160_+ENSG00000145907.13ENST00000394123hsa-miR-6794-3p1518091571518091637mer-m8151809147151809164150-20.62
CAediting_442366chr5_151809073_+ENSG00000145907.13ENST00000394123hsa-miR-6829-3p1518090691518090757mer-m8151809057151809076147-16.32
CAediting_442363chr5_151808976_+ENSG00000145907.13ENST00000394123hsa-miR-6848-3p1518089741518089807mer-m8151808963151808981140-15.47
CAediting_442360chr5_151808921_+ENSG00000145907.13ENST00000394123hsa-miR-7151-3p1518089141518089218mer-1a151808905151808921146-17.62
CAediting_442367chr5_151809101_+ENSG00000145907.13ENST00000394123hsa-miR-939-3p1518090961518091038mer-1a151809081151809103146-21.41

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000145907.13ENST00000394123hsa-miR-624-3p1518090001518090067mer-m8151808987151809007164-16.27
CAediting_980496chr14_31014685_-ENSG00000145907.13ENST00000394123hsa-miR-624-3p1518091651518091717mer-m8151809152151809172148-13.46
CAediting_980496chr14_31014685_-ENSG00000145907.13ENST00000394123hsa-miR-624-3p1518101021518101087mer-m8151810089151810109150-14.79
CAediting_393chr1_1167164_+ENSG00000145907.13ENST00000394123hsa-miR-200b-3p1518051131518051197mer-m8151805098151805120145-10.43
CAediting_393chr1_1167164_+ENSG00000145907.13ENST00000394123hsa-miR-200b-3p1518079981518080047mer-m8151807985151808005147-9
CAediting_393chr1_1167164_+ENSG00000145907.13ENST00000394123hsa-miR-200b-3p1518100071518100137mer-m8151809995151810014144-10.74
CAediting_393chr1_1167164_+ENSG00000145907.13ENST00000394123hsa-miR-200b-3p1518118211518118288mer-1a151811808151811828162-14.95
CAediting_688080chr9_63819626_+ENSG00000145907.13ENST00000394123hsa-miR-4477b1518056501518056578mer-1a151805637151805657144-11.06
CAediting_1229414chr17_67471546_+ENSG00000145907.13ENST00000394123hsa-miR-548aa1518100871518100948mer-1a151810071151810094159-16.53
CAediting_1229415chr17_67471547_+ENSG00000145907.13ENST00000394123hsa-miR-548aa1518057121518057187mer-m8151805694151805719147-11.97
CAediting_1160181chr17_7017644_-ENSG00000145907.13ENST00000394123hsa-miR-195-3p1518066891518066957mer-1a151806681151806702142-10.72
CAediting_1160181chr17_7017644_-ENSG00000145907.13ENST00000394123hsa-miR-195-3p1518084931518084997mer-m8151808479151808500140-12.24
CAediting_1351755chr19_40282625_-ENSG00000145907.13ENST00000394123hsa-miR-6411518083541518083618mer-1a151808340151808361151-12.42
CAediting_1368054chr19_46709310_-ENSG00000145907.13ENST00000394123hsa-miR-320e1518098661518098727mer-m8151809856151809873152-21.61
CAediting_117844chr1_162342605_+ENSG00000145907.13ENST00000394123hsa-miR-556-3p1518053571518053637mer-m8151805341151805364159-13.93
CAediting_228905chr2_188297554_+ENSG00000145907.13ENST00000394123hsa-miR-561-3p1518055851518055928mer-1a151805571151805592140-8.83
CAediting_228905chr2_188297554_+ENSG00000145907.13ENST00000394123hsa-miR-561-3p1518095731518095797mer-m8151809557151809580148-12.51
CAediting_396018chr5_1062918_-ENSG00000145907.13ENST00000394123hsa-miR-46351518068491518068546mer151806835151806855140-19.16
CAediting_396018chr5_1062918_-ENSG00000145907.13ENST00000394123hsa-miR-46351518111011518111077mer-m8151811089151811108161-20.96
CAediting_1524209chrX_134546392_-ENSG00000145907.13ENST00000394123hsa-miR-503-5p1518121071518121126mer151812090151812113152-25.11

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_573001chr7_92204086_-ENSG00000145907.13ENST00000394123hsa-miR-1285-5p1518054111518054177mer-m8151805397151805418142-12.86
CAediting_573000chr7_92204081_-ENSG00000145907.13ENST00000394123hsa-miR-1285-5p1518054111518054177mer-m8151805397151805418142-12.86
CAediting_573001chr7_92204086_-ENSG00000145907.13ENST00000394123hsa-miR-1285-5p1518071041518071118mer-1a151807093151807111148-17.99
CAediting_573000chr7_92204081_-ENSG00000145907.13ENST00000394123hsa-miR-1285-5p1518071041518071118mer-1a151807093151807111148-17.99
CAediting_846604chr11_93733708_-ENSG00000145907.13ENST00000394123hsa-miR-1304-3p1518071021518071098mer-1a151807088151807109150-17.56
CAediting_1160181chr17_7017644_-ENSG00000145907.13ENST00000394123hsa-miR-195-3p1518051841518051907mer-m8151805170151805191142-17.77
CAediting_1160181chr17_7017644_-ENSG00000145907.13ENST00000394123hsa-miR-195-3p1518072271518072326mer151807212151807233143-13.3
CAediting_393chr1_1167164_+ENSG00000145907.13ENST00000394123hsa-miR-200b-3p1518055211518055277mer-m8151805506151805528146-8.65
CAediting_1368054chr19_46709310_-ENSG00000145907.13ENST00000394123hsa-miR-320e1518089781518089847mer-m8151808968151808985151-12.57
CAediting_604450chr7_133034877_-ENSG00000145907.13ENST00000394123hsa-miR-36541518117361518117438mer-1a151811725151811743145-14.72
CAediting_77128chr1_85133844_+ENSG00000145907.13ENST00000394123hsa-miR-4423-3p1518109181518109247mer-m8151810906151810925152-11.84
CAediting_688080chr9_63819626_+ENSG00000145907.13ENST00000394123hsa-miR-4477b1518118111518118177mer-m8151811797151811818152-10.27
CAediting_688081chr9_63819627_+ENSG00000145907.13ENST00000394123hsa-miR-4477b1518118111518118177mer-m8151811797151811818152-10.27
CAediting_396018chr5_1062918_-ENSG00000145907.13ENST00000394123hsa-miR-46351518058791518058857mer-m8151805866151805886151-17.57
CAediting_396018chr5_1062918_-ENSG00000145907.13ENST00000394123hsa-miR-46351518102511518102577mer-m8151810236151810258155-20.3
CAediting_1524209chrX_134546392_-ENSG00000145907.13ENST00000394123hsa-miR-503-5p1518117841518117907mer-m8151811765151811791150-18.22
CAediting_228905chr2_188297554_+ENSG00000145907.13ENST00000394123hsa-miR-561-3p1518054481518054547mer-m8151805434151805455140-5
CAediting_228905chr2_188297554_+ENSG00000145907.13ENST00000394123hsa-miR-561-3p1518093531518093597mer-m8151809339151809360140-8.23
CAediting_228905chr2_188297554_+ENSG00000145907.13ENST00000394123hsa-miR-561-3p1518115041518115118mer-1a151811490151811511140-6.98
CAediting_228905chr2_188297554_+ENSG00000145907.13ENST00000394123hsa-miR-561-3p1518119141518119196mer151811897151811920147-20.84
CAediting_748296chr10_51299626_+ENSG00000145907.13ENST00000394123hsa-miR-605-3p1518068771518068837mer-m8151806861151806884144-15.07
CAediting_980496chr14_31014685_-ENSG00000145907.13ENST00000394123hsa-miR-624-3p1518083381518083436mer151808322151808344141-10.36
CAediting_980496chr14_31014685_-ENSG00000145907.13ENST00000394123hsa-miR-624-3p1518100441518100518mer-1a151810028151810051146-15.03
CAediting_1351755chr19_40282625_-ENSG00000145907.13ENST00000394123hsa-miR-6411518044211518044277mer-m8151804405151804428140-10.3
CAediting_1351755chr19_40282625_-ENSG00000145907.13ENST00000394123hsa-miR-6411518080591518080668mer-1a151808043151808066142-8.67

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for G3BP1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000394123.6protein_codingSoverviewSoverview
ENST00000518726.4retained_intronSoverviewSoverview
ENST00000519832.1retained_intronSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_442358ENST00000394123.6chr5_151806824_+-2853.10-2846.50-2868.30
CAediting_442359ENST00000394123.6chr5_151806854_+-2846.10-2846.50-2868.30
CAediting_442360ENST00000394123.6chr5_151808921_+-2846.20-2846.50-2868.30
CAediting_442361ENST00000394123.6chr5_151808922_+-2850.70-2846.50-2868.30
CAediting_442362ENST00000394123.6chr5_151808927_+-2850.90-2846.50-2868.30
CAediting_442363ENST00000394123.6chr5_151808976_+-2845.60-2846.50-2868.30
CAediting_442364ENST00000394123.6chr5_151809036_+-2846.50-2846.50-2868.30
CAediting_442365ENST00000394123.6chr5_151809048_+-2846.10-2846.50-2868.30
CAediting_442366ENST00000394123.6chr5_151809073_+-2845.60-2846.50-2868.30
CAediting_442367ENST00000394123.6chr5_151809101_+-2845.80-2846.50-2868.30
CAediting_442368ENST00000394123.6chr5_151809160_+-2849.00-2846.50-2868.30
CAediting_442369ENST00000394123.6chr5_151809192_+-2847.90-2846.50-2868.30
CAediting_442370ENST00000394123.6chr5_151809194_+-2850.20-2846.50-2868.30
CAediting_442371ENST00000394123.6chr5_151809200_+-2846.50-2846.50-2868.30
CAediting_442289ENST00000518726.4chr5_151786972_+-250.70-246.40-252.10
CAediting_442290ENST00000518726.4chr5_151786982_+-248.30-246.40-252.10
CAediting_442291ENST00000518726.4chr5_151786984_+-248.00-246.40-252.10
CAediting_442310ENST00000519832.1chr5_151791688_+-307.00-306.70-307.00
CAediting_442311ENST00000519832.1chr5_151791737_+-306.70-306.70-307.00

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Relation with ADAR for G3BP1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
OVCAediting_442329chr5_151793893_+....0.02371271894972850.246647257663169

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Relation with cancer stages for G3BP1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for G3BP1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for G3BP1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for G3BP1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource