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Editing gene: TIMM23B (CAeditome ID:100652748)

Gene summary for TIMM23B

Gene summary

Gene information	Gene symbol	TIMM23B
	Gene ID	100652748
	Gene name	translocase of inner mitochondrial membrane 23 homolog B
	Synonyms	-
	Cytomap	10q11.23
	Type of gene	protein-coding
	Description	mitochondrial import inner membrane translocase subunit Tim23Bputative mitochondrial import inner membrane translocase subunit Tim23B
	Modification date	20210529
	UniProtAcc	Q5SRD1
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for TIMM23B

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000204152.9

RNA A-to-I editing events in Cancer.

CAediting_747709(49973384, +), CAediting_747710(49973402, +), CAediting_747711(49973404, +), CAediting_747712(49973412, +), CAediting_747713(49973414, +), CAediting_747714(49973420, +), CAediting_747715(49973421, +), CAediting_747716(49973426, +), CAediting_747717(49973429, +), CAediting_747718(49973437, +), CAediting_747719(49973443, +), CAediting_747720(49973447, +), CAediting_747721(49973450, +), CAediting_747722(49973466, +), CAediting_747723(49973469, +), CAediting_747724(49973474, +), CAediting_747725(49973475, +), CAediting_747726(49973480, +), CAediting_747727(49973492, +), CAediting_747728(49973494, +), CAediting_747729(49973498, +), CAediting_747730(49973505, +), CAediting_747731(49973511, +), CAediting_747732(49973513, +), CAediting_747733(49973514, +), CAediting_747734(49973516, +), CAediting_747735(49973517, +), CAediting_747736(49973518, +), CAediting_747737(49973522, +), CAediting_747738(49973525, +), CAediting_747739(49973561, +), CAediting_747740(49973570, +), CAediting_747741(49973583, +), CAediting_747742(49973586, +), CAediting_747743(49973592, +), CAediting_747744(49973602, +), CAediting_747745(49973605, +), CAediting_747746(49973622, +), CAediting_747747(49973626, +), CAediting_747748(49973664, +), CAediting_747749(49973665, +), CAediting_747750(49973830, +), CAediting_747751(49973854, +), CAediting_747752(49973859, +), CAediting_747753(49973871, +), CAediting_747754(49973881, +), CAediting_747755(49973901, +), CAediting_747756(49973902, +), CAediting_747757(49973905, +), CAediting_747758(49973919, +), CAediting_747759(49973927, +), CAediting_747760(49973928, +), CAediting_747761(49973941, +), CAediting_747762(49973943, +), CAediting_747763(49973947, +), CAediting_747764(49973957, +), CAediting_747765(49973967, +), CAediting_747766(49973982, +), CAediting_747767(49973985, +), CAediting_747768(49973987, +), CAediting_747769(49974023, +), CAediting_747770(49974047, +), CAediting_747771(49974074, +), CAediting_747772(49974076, +),

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RNA editing positional annotations for TIMM23B using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_747709	chr10_49973384_+	ncRNA_intronic
CAediting_747710	chr10_49973402_+	ncRNA_intronic
CAediting_747711	chr10_49973404_+	ncRNA_intronic
CAediting_747712	chr10_49973412_+	ncRNA_intronic
CAediting_747713	chr10_49973414_+	ncRNA_intronic
CAediting_747714	chr10_49973420_+	ncRNA_intronic
CAediting_747715	chr10_49973421_+	ncRNA_intronic
CAediting_747716	chr10_49973426_+	ncRNA_intronic
CAediting_747717	chr10_49973429_+	ncRNA_intronic
CAediting_747718	chr10_49973437_+	ncRNA_intronic
CAediting_747719	chr10_49973443_+	ncRNA_intronic
CAediting_747720	chr10_49973447_+	ncRNA_intronic
CAediting_747721	chr10_49973450_+	ncRNA_intronic
CAediting_747722	chr10_49973466_+	ncRNA_intronic
CAediting_747723	chr10_49973469_+	ncRNA_intronic
CAediting_747724	chr10_49973474_+	ncRNA_intronic
CAediting_747725	chr10_49973475_+	ncRNA_intronic
CAediting_747726	chr10_49973480_+	ncRNA_intronic
CAediting_747727	chr10_49973492_+	ncRNA_intronic
CAediting_747728	chr10_49973494_+	ncRNA_intronic
CAediting_747729	chr10_49973498_+	ncRNA_intronic
CAediting_747730	chr10_49973505_+	ncRNA_intronic
CAediting_747731	chr10_49973511_+	ncRNA_intronic
CAediting_747732	chr10_49973513_+	ncRNA_intronic
CAediting_747733	chr10_49973514_+	ncRNA_intronic
CAediting_747734	chr10_49973516_+	ncRNA_intronic
CAediting_747735	chr10_49973517_+	ncRNA_intronic
CAediting_747736	chr10_49973518_+	ncRNA_intronic
CAediting_747737	chr10_49973522_+	ncRNA_intronic
CAediting_747738	chr10_49973525_+	ncRNA_intronic
CAediting_747739	chr10_49973561_+	ncRNA_intronic
CAediting_747740	chr10_49973570_+	ncRNA_intronic
CAediting_747741	chr10_49973583_+	ncRNA_intronic
CAediting_747742	chr10_49973586_+	ncRNA_intronic
CAediting_747743	chr10_49973592_+	ncRNA_intronic
CAediting_747744	chr10_49973602_+	ncRNA_intronic
CAediting_747745	chr10_49973605_+	ncRNA_intronic
CAediting_747746	chr10_49973622_+	ncRNA_intronic
CAediting_747747	chr10_49973626_+	ncRNA_intronic
CAediting_747748	chr10_49973664_+	ncRNA_intronic
CAediting_747749	chr10_49973665_+	ncRNA_intronic
CAediting_747750	chr10_49973830_+	ncRNA_intronic
CAediting_747751	chr10_49973854_+	ncRNA_intronic
CAediting_747752	chr10_49973859_+	ncRNA_intronic
CAediting_747753	chr10_49973871_+	ncRNA_intronic
CAediting_747754	chr10_49973881_+	ncRNA_intronic
CAediting_747755	chr10_49973901_+	ncRNA_intronic
CAediting_747756	chr10_49973902_+	ncRNA_intronic
CAediting_747757	chr10_49973905_+	ncRNA_intronic
CAediting_747758	chr10_49973919_+	ncRNA_intronic
CAediting_747759	chr10_49973927_+	ncRNA_intronic
CAediting_747760	chr10_49973928_+	ncRNA_intronic
CAediting_747761	chr10_49973941_+	ncRNA_intronic
CAediting_747762	chr10_49973943_+	ncRNA_intronic
CAediting_747763	chr10_49973947_+	ncRNA_intronic
CAediting_747764	chr10_49973957_+	ncRNA_intronic
CAediting_747765	chr10_49973967_+	ncRNA_intronic
CAediting_747766	chr10_49973982_+	ncRNA_intronic
CAediting_747767	chr10_49973985_+	ncRNA_intronic
CAediting_747768	chr10_49973987_+	ncRNA_intronic
CAediting_747769	chr10_49974023_+	ncRNA_intronic
CAediting_747770	chr10_49974047_+	ncRNA_intronic
CAediting_747771	chr10_49974074_+	ncRNA_intronic
CAediting_747772	chr10_49974076_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_747710	chr10_49973402_+	SINE	Alu	AluJr
CAediting_747711	chr10_49973404_+	SINE	Alu	AluJr
CAediting_747712	chr10_49973412_+	SINE	Alu	AluJr
CAediting_747713	chr10_49973414_+	SINE	Alu	AluJr
CAediting_747714	chr10_49973420_+	SINE	Alu	AluJr
CAediting_747715	chr10_49973421_+	SINE	Alu	AluJr
CAediting_747716	chr10_49973426_+	SINE	Alu	AluJr
CAediting_747717	chr10_49973429_+	SINE	Alu	AluJr
CAediting_747718	chr10_49973437_+	SINE	Alu	AluJr
CAediting_747719	chr10_49973443_+	SINE	Alu	AluJr
CAediting_747720	chr10_49973447_+	SINE	Alu	AluJr
CAediting_747721	chr10_49973450_+	SINE	Alu	AluJr
CAediting_747722	chr10_49973466_+	SINE	Alu	AluJr
CAediting_747723	chr10_49973469_+	SINE	Alu	AluJr
CAediting_747724	chr10_49973474_+	SINE	Alu	AluJr
CAediting_747725	chr10_49973475_+	SINE	Alu	AluJr
CAediting_747726	chr10_49973480_+	SINE	Alu	AluJr
CAediting_747727	chr10_49973492_+	SINE	Alu	AluJr
CAediting_747728	chr10_49973494_+	SINE	Alu	AluJr
CAediting_747729	chr10_49973498_+	SINE	Alu	AluJr
CAediting_747730	chr10_49973505_+	SINE	Alu	AluJr
CAediting_747731	chr10_49973511_+	SINE	Alu	AluJr
CAediting_747732	chr10_49973513_+	SINE	Alu	AluJr
CAediting_747733	chr10_49973514_+	SINE	Alu	AluJr
CAediting_747734	chr10_49973516_+	SINE	Alu	AluJr
CAediting_747735	chr10_49973517_+	SINE	Alu	AluJr
CAediting_747736	chr10_49973518_+	SINE	Alu	AluJr
CAediting_747737	chr10_49973522_+	SINE	Alu	AluJr
CAediting_747738	chr10_49973525_+	SINE	Alu	AluJr
CAediting_747739	chr10_49973561_+	SINE	Alu	AluJr
CAediting_747740	chr10_49973570_+	SINE	Alu	AluJr
CAediting_747741	chr10_49973583_+	SINE	Alu	AluJr
CAediting_747742	chr10_49973586_+	SINE	Alu	AluJr
CAediting_747743	chr10_49973592_+	SINE	Alu	AluJr
CAediting_747744	chr10_49973602_+	SINE	Alu	AluJr
CAediting_747745	chr10_49973605_+	SINE	Alu	AluJr
CAediting_747746	chr10_49973622_+	SINE	Alu	AluJr
CAediting_747747	chr10_49973626_+	SINE	Alu	AluJr
CAediting_747748	chr10_49973664_+	SINE	Alu	AluJr
CAediting_747749	chr10_49973665_+	SINE	Alu	AluJr
CAediting_747750	chr10_49973830_+	SINE	Alu	AluSc
CAediting_747751	chr10_49973854_+	SINE	Alu	AluSc
CAediting_747752	chr10_49973859_+	SINE	Alu	AluSc
CAediting_747753	chr10_49973871_+	SINE	Alu	AluSc
CAediting_747754	chr10_49973881_+	SINE	Alu	AluSc
CAediting_747755	chr10_49973901_+	SINE	Alu	AluSc
CAediting_747756	chr10_49973902_+	SINE	Alu	AluSc
CAediting_747757	chr10_49973905_+	SINE	Alu	AluSc
CAediting_747758	chr10_49973919_+	SINE	Alu	AluSc
CAediting_747759	chr10_49973927_+	SINE	Alu	AluSc
CAediting_747760	chr10_49973928_+	SINE	Alu	AluSc
CAediting_747761	chr10_49973941_+	SINE	Alu	AluSc
CAediting_747762	chr10_49973943_+	SINE	Alu	AluSc
CAediting_747763	chr10_49973947_+	SINE	Alu	AluSc
CAediting_747764	chr10_49973957_+	SINE	Alu	AluSc
CAediting_747765	chr10_49973967_+	SINE	Alu	AluSc
CAediting_747766	chr10_49973982_+	SINE	Alu	AluSc
CAediting_747767	chr10_49973985_+	SINE	Alu	AluSc
CAediting_747768	chr10_49973987_+	SINE	Alu	AluSc
CAediting_747769	chr10_49974023_+	SINE	Alu	AluSc
CAediting_747770	chr10_49974047_+	SINE	Alu	AluSc
CAediting_747771	chr10_49974074_+	SINE	Alu	AluSc
CAediting_747772	chr10_49974076_+	SINE	Alu	AluSc

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RNA A-to-I editing events in the alternative splicing sites for TIMM23B

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000204152.9.TIMM23B.

Correlation between RNA A-to-I editing and PSI for ENSG00000204152.9.TIMM23B.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TIMM23B

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for TIMM23B

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for TIMM23B

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_747711	chr10_49973404_+	ENSG00000204152.9	ENST00000478381	hsa-miR-181c-3p	49973402	49973408	7mer-m8	49973386	49973409	151.00	-25.34
CAediting_747714	chr10_49973420_+	ENSG00000204152.9	ENST00000478381	hsa-miR-513a-5p	49973414	49973420	7mer-m8	49973404	49973421	140.00	-17.08
CAediting_747714	chr10_49973420_+	ENSG00000204152.9	ENST00000478381	hsa-miR-513a-5p	49973414	49973420	7mer-m8	49973404	49973421	140.00	-17.08
CAediting_747715	chr10_49973421_+	ENSG00000204152.9	ENST00000478381	hsa-miR-3672	49973419	49973425	7mer-m8	49973401	49973426	162.00	-13.60
CAediting_747715	chr10_49973421_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6864-3p	49973419	49973425	7mer-m8	49973406	49973426	142.00	-10.40
CAediting_747722	chr10_49973466_+	ENSG00000204152.9	ENST00000478381	hsa-miR-532-3p	49973464	49973469	6mer	49973449	49973470	140.00	-25.81
CAediting_747722	chr10_49973466_+	ENSG00000204152.9	ENST00000478381	hsa-miR-7977	49973462	49973468	7mer-m8	49973450	49973469	146.00	-18.68
CAediting_747725	chr10_49973475_+	ENSG00000204152.9	ENST00000478381	hsa-miR-1200	49973471	49973476	6mer	49973459	49973477	143.00	-22.72
CAediting_747725	chr10_49973475_+	ENSG00000204152.9	ENST00000478381	hsa-miR-12113	49973468	49973474	7mer-m8	49973454	49973475	146.00	-16.61
CAediting_747725	chr10_49973475_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4539	49973468	49973474	7mer-m8	49973457	49973475	142.00	-13.45
CAediting_747728	chr10_49973494_+	ENSG00000204152.9	ENST00000478381	hsa-miR-1279	49973487	49973493	7mer-m8	49973478	49973494	147.00	-12.20
CAediting_747728	chr10_49973494_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4776-3p	49973491	49973497	7mer-m8	49973475	49973498	153.00	-22.66
CAediting_747728	chr10_49973494_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4776-3p	49973491	49973497	7mer-m8	49973475	49973498	153.00	-22.66
CAediting_747728	chr10_49973494_+	ENSG00000204152.9	ENST00000478381	hsa-miR-5590-5p	49973490	49973497	8mer-1a	49973474	49973497	143.00	-13.20
CAediting_747731	chr10_49973511_+	ENSG00000204152.9	ENST00000478381	hsa-miR-3678-3p	49973506	49973513	8mer-1a	49973492	49973513	142.00	-11.14
CAediting_747731	chr10_49973511_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4756-3p	49973504	49973510	7mer-m8	49973491	49973511	154.00	-18.07
CAediting_747740	chr10_49973570_+	ENSG00000204152.9	ENST00000478381	hsa-miR-2355-5p	49973566	49973572	7mer-m8	49973554	49973573	153.00	-19.75
CAediting_747744	chr10_49973602_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4655-5p	49973597	49973604	8mer-1a	49973583	49973604	140.00	-21.23
CAediting_747745	chr10_49973605_+	ENSG00000204152.9	ENST00000478381	hsa-miR-497-3p	49973602	49973608	7mer-m8	49973590	49973609	149.00	-19.09
CAediting_747745	chr10_49973605_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6715a-3p	49973603	49973610	8mer-1a	49973589	49973610	150.00	-15.15
CAediting_747749	chr10_49973665_+	ENSG00000204152.9	ENST00000478381	hsa-miR-490-3p	49973661	49973667	7mer-m8	49973645	49973668	154.00	-25.69
CAediting_747749	chr10_49973665_+	ENSG00000204152.9	ENST00000478381	hsa-miR-7978	49973658	49973664	7mer-m8	49973644	49973665	146.00	-18.56
CAediting_747750	chr10_49973830_+	ENSG00000204152.9	ENST00000478381	hsa-miR-3667-5p	49973828	49973834	7mer-m8	49973812	49973835	158.00	-17.87
CAediting_747709	chr10_49973384_+	ENSG00000204152.9	ENST00000478381	hsa-miR-145-3p	49973382	49973388	7mer-m8	49973368	49973389	140.00	-13.84
CAediting_747717	chr10_49973429_+	ENSG00000204152.9	ENST00000478381	hsa-miR-523-3p	49973426	49973432	7mer-m8	49973412	49973433	151.00	-20.40
CAediting_747718	chr10_49973437_+	ENSG00000204152.9	ENST00000478381	hsa-miR-361-3p	49973433	49973438	6mer	49973418	49973439	147.00	-28.16
CAediting_747719	chr10_49973443_+	ENSG00000204152.9	ENST00000478381	hsa-miR-18a-3p	49973436	49973442	7mer-m8	49973428	49973448	150.00	-23.23
CAediting_747719	chr10_49973443_+	ENSG00000204152.9	ENST00000478381	hsa-miR-18a-3p	49973441	49973447	7mer-m8	49973428	49973448	150.00	-23.23
CAediting_747719	chr10_49973443_+	ENSG00000204152.9	ENST00000478381	hsa-miR-3173-5p	49973439	49973446	8mer-1a	49973425	49973446	146.00	-23.16
CAediting_747719	chr10_49973443_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6752-3p	49973438	49973444	7mer-m8	49973424	49973445	158.00	-24.08
CAediting_747719	chr10_49973443_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6799-3p	49973439	49973446	8mer-1a	49973424	49973446	140.00	-20.80
CAediting_747721	chr10_49973450_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6752-3p	49973443	49973449	7mer-m8	49973430	49973450	140.00	-22.98
CAediting_747721	chr10_49973450_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6801-3p	49973444	49973450	7mer-m8	49973432	49973451	148.00	-21.42
CAediting_747721	chr10_49973450_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6810-3p	49973444	49973450	7mer-m8	49973432	49973451	157.00	-30.37
CAediting_747723	chr10_49973469_+	ENSG00000204152.9	ENST00000478381	hsa-miR-5195-5p	49973464	49973470	7mer-m8	49973450	49973471	148.00	-18.31
CAediting_747727	chr10_49973492_+	ENSG00000204152.9	ENST00000478381	hsa-miR-222-3p	49973489	49973496	8mer-1a	49973475	49973496	156.00	-19.10
CAediting_747727	chr10_49973492_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4317	49973485	49973491	7mer-m8	49973476	49973492	148.00	-17.63
CAediting_747734	chr10_49973516_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6844	49973510	49973517	8mer-1a	49973497	49973517	140.00	-8.12
CAediting_747739	chr10_49973561_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6716-3p	49973555	49973561	7mer-m8	49973541	49973562	142.00	-13.13
CAediting_747741	chr10_49973583_+	ENSG00000204152.9	ENST00000478381	hsa-miR-188-3p	49973579	49973585	7mer-m8	49973567	49973586	160.00	-26.82
CAediting_747741	chr10_49973583_+	ENSG00000204152.9	ENST00000478381	hsa-miR-532-3p	49973580	49973586	7mer-m8	49973568	49973587	160.00	-28.20
CAediting_747746	chr10_49973622_+	ENSG00000204152.9	ENST00000478381	hsa-miR-324-3p	49973615	49973621	7mer-m8	49973599	49973622	152.00	-31.85
CAediting_747746	chr10_49973622_+	ENSG00000204152.9	ENST00000478381	hsa-miR-3651	49973620	49973626	7mer-m8	49973605	49973627	151.00	-20.62
CAediting_747753	chr10_49973871_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4537	49973868	49973875	8mer-1a	49973854	49973875	148.00	-26.39
CAediting_747759	chr10_49973927_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6771-5p	49973921	49973927	7mer-m8	49973909	49973928	160.00	-34.33
CAediting_747760	chr10_49973928_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6852-5p	49973923	49973928	6mer	49973910	49973929	149.00	-26.62
CAediting_747761	chr10_49973941_+	ENSG00000204152.9	ENST00000478381	hsa-miR-17-3p	49973937	49973943	7mer-m8	49973922	49973944	158.00	-20.42
CAediting_747763	chr10_49973947_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6720-3p	49973941	49973948	8mer-1a	49973927	49973948	152.00	-21.15
CAediting_747765	chr10_49973967_+	ENSG00000204152.9	ENST00000478381	hsa-miR-34a-3p	49973963	49973969	7mer-m8	49973949	49973970	141.00	-9.04
CAediting_747769	chr10_49974023_+	ENSG00000204152.9	ENST00000478381	hsa-miR-3144-5p	49974021	49974027	7mer-m8	49974011	49974028	146.00	-20.02
CAediting_747769	chr10_49974023_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4523	49974017	49974023	7mer-m8	49974004	49974024	151.00	-25.72
CAediting_747772	chr10_49974076_+	ENSG00000204152.9	ENST00000478381	hsa-miR-100-5p	49974072	49974078	7mer-m8	49974057	49974079	166.00	-23.64
CAediting_747772	chr10_49974076_+	ENSG00000204152.9	ENST00000478381	hsa-miR-99a-5p	49974072	49974078	7mer-m8	49974057	49974079	162.00	-23.78
CAediting_747772	chr10_49974076_+	ENSG00000204152.9	ENST00000478381	hsa-miR-99b-5p	49974072	49974078	7mer-m8	49974057	49974079	162.00	-29.13
CAediting_747764	chr10_49973957_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6090	49973955	49973961	7mer-m8	49973945	49973962	147.00	-21.31

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_747714	chr10_49973420_+	ENSG00000204152.9	ENST00000478381	hsa-miR-10399-5p	49973415	49973421	7mer-m8	49973401	49973422	148	-10.54
CAediting_747715	chr10_49973421_+	ENSG00000204152.9	ENST00000478381	hsa-miR-10399-5p	49973415	49973421	7mer-m8	49973401	49973422	148	-10.54
CAediting_747739	chr10_49973561_+	ENSG00000204152.9	ENST00000478381	hsa-miR-12113	49973555	49973561	7mer-m8	49973541	49973562	154	-18.24
CAediting_747759	chr10_49973927_+	ENSG00000204152.9	ENST00000478381	hsa-miR-12126	49973923	49973930	8mer-1a	49973907	49973930	147	-13.23
CAediting_747760	chr10_49973928_+	ENSG00000204152.9	ENST00000478381	hsa-miR-12126	49973923	49973930	8mer-1a	49973907	49973930	147	-13.23
CAediting_747730	chr10_49973505_+	ENSG00000204152.9	ENST00000478381	hsa-miR-143-3p	49973502	49973508	7mer-m8	49973489	49973509	148	-14.66
CAediting_747718	chr10_49973437_+	ENSG00000204152.9	ENST00000478381	hsa-miR-1470	49973434	49973439	6mer	49973420	49973440	143	-27.39
CAediting_747734	chr10_49973516_+	ENSG00000204152.9	ENST00000478381	hsa-miR-153-5p	49973514	49973521	8mer-1a	49973500	49973521	147	-9.41
CAediting_747735	chr10_49973517_+	ENSG00000204152.9	ENST00000478381	hsa-miR-153-5p	49973514	49973521	8mer-1a	49973500	49973521	147	-9.41
CAediting_747736	chr10_49973518_+	ENSG00000204152.9	ENST00000478381	hsa-miR-153-5p	49973514	49973521	8mer-1a	49973500	49973521	147	-9.41
CAediting_747741	chr10_49973583_+	ENSG00000204152.9	ENST00000478381	hsa-miR-155-3p	49973579	49973585	7mer-m8	49973565	49973586	145	-17.12
CAediting_747742	chr10_49973586_+	ENSG00000204152.9	ENST00000478381	hsa-miR-155-3p	49973579	49973585	7mer-m8	49973565	49973586	145	-17.12
CAediting_747719	chr10_49973443_+	ENSG00000204152.9	ENST00000478381	hsa-miR-1915-5p	49973438	49973444	7mer-m8	49973425	49973445	150	-21.17
CAediting_747739	chr10_49973561_+	ENSG00000204152.9	ENST00000478381	hsa-miR-203b-3p	49973555	49973560	6mer	49973536	49973561	143	-17.76
CAediting_747759	chr10_49973927_+	ENSG00000204152.9	ENST00000478381	hsa-miR-30b-3p	49973920	49973927	8mer-1a	49973906	49973927	151	-15.38
CAediting_747753	chr10_49973871_+	ENSG00000204152.9	ENST00000478381	hsa-miR-3160-3p	49973868	49973875	8mer-1a	49973854	49973875	153	-18.6
CAediting_747753	chr10_49973871_+	ENSG00000204152.9	ENST00000478381	hsa-miR-3160-3p	49973868	49973875	8mer-1a	49973854	49973875	153	-18.6
CAediting_747752	chr10_49973859_+	ENSG00000204152.9	ENST00000478381	hsa-miR-324-3p	49973856	49973862	7mer-m8	49973841	49973863	148	-24.9
CAediting_747737	chr10_49973522_+	ENSG00000204152.9	ENST00000478381	hsa-miR-335-3p	49973518	49973524	7mer-m8	49973504	49973525	152	-5.88
CAediting_747738	chr10_49973525_+	ENSG00000204152.9	ENST00000478381	hsa-miR-335-3p	49973518	49973524	7mer-m8	49973504	49973525	152	-5.88
CAediting_747738	chr10_49973525_+	ENSG00000204152.9	ENST00000478381	hsa-miR-33a-3p	49973522	49973528	7mer-m8	49973508	49973529	147	-9.85
CAediting_747768	chr10_49973987_+	ENSG00000204152.9	ENST00000478381	hsa-miR-340-3p	49973985	49973991	7mer-m8	49973971	49973992	152	-18.95
CAediting_747726	chr10_49973480_+	ENSG00000204152.9	ENST00000478381	hsa-miR-3663-5p	49973474	49973480	7mer-m8	49973465	49973481	141	-19.69
CAediting_747731	chr10_49973511_+	ENSG00000204152.9	ENST00000478381	hsa-miR-3674	49973507	49973514	8mer-1a	49973492	49973514	146	-9.01
CAediting_747732	chr10_49973513_+	ENSG00000204152.9	ENST00000478381	hsa-miR-3674	49973507	49973514	8mer-1a	49973492	49973514	146	-9.01
CAediting_747733	chr10_49973514_+	ENSG00000204152.9	ENST00000478381	hsa-miR-3674	49973507	49973514	8mer-1a	49973492	49973514	146	-9.01
CAediting_747759	chr10_49973927_+	ENSG00000204152.9	ENST00000478381	hsa-miR-3689a-3p	49973920	49973927	8mer-1a	49973907	49973927	147	-18.72
CAediting_747759	chr10_49973927_+	ENSG00000204152.9	ENST00000478381	hsa-miR-3689b-3p	49973920	49973927	8mer-1a	49973907	49973927	147	-17.55
CAediting_747759	chr10_49973927_+	ENSG00000204152.9	ENST00000478381	hsa-miR-3689c	49973920	49973927	8mer-1a	49973907	49973927	147	-17.55
CAediting_747754	chr10_49973881_+	ENSG00000204152.9	ENST00000478381	hsa-miR-377-5p	49973879	49973885	7mer-m8	49973864	49973886	153	-19.16
CAediting_747713	chr10_49973414_+	ENSG00000204152.9	ENST00000478381	hsa-miR-3934-5p	49973411	49973417	7mer-m8	49973396	49973418	155	-20.57
CAediting_747740	chr10_49973570_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4268	49973568	49973574	7mer-m8	49973555	49973575	140	-17.72
CAediting_747710	chr10_49973402_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4289	49973400	49973406	7mer-m8	49973389	49973407	153	-16.41
CAediting_747711	chr10_49973404_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4289	49973400	49973406	7mer-m8	49973389	49973407	153	-16.41
CAediting_747718	chr10_49973437_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4290	49973434	49973441	8mer-1a	49973423	49973441	140	-16.34
CAediting_747739	chr10_49973561_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4293	49973558	49973565	8mer-1a	49973545	49973565	144	-14.87
CAediting_747738	chr10_49973525_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4307	49973521	49973527	7mer-m8	49973510	49973528	149	-5.78
CAediting_747750	chr10_49973830_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4432	49973828	49973834	7mer-m8	49973813	49973835	146	-11.81
CAediting_747758	chr10_49973919_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4478	49973916	49973922	7mer-m8	49973908	49973923	149	-25.05
CAediting_747755	chr10_49973901_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4635	49973896	49973902	7mer-m8	49973883	49973903	150	-13.2
CAediting_747756	chr10_49973902_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4635	49973896	49973902	7mer-m8	49973883	49973903	150	-13.2
CAediting_747758	chr10_49973919_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4649-3p	49973913	49973919	7mer-m8	49973900	49973920	140	-15.87
CAediting_747723	chr10_49973469_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4680-5p	49973467	49973473	7mer-1a	49973453	49973473	140	-16.78
CAediting_747730	chr10_49973505_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4770	49973502	49973508	7mer-m8	49973491	49973509	143	-11.95
CAediting_747752	chr10_49973859_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4793-3p	49973853	49973859	7mer-m8	49973838	49973860	154	-21.55
CAediting_747740	chr10_49973570_+	ENSG00000204152.9	ENST00000478381	hsa-miR-4797-3p	49973564	49973570	7mer-m8	49973551	49973571	151	-14.51
CAediting_747758	chr10_49973919_+	ENSG00000204152.9	ENST00000478381	hsa-miR-485-5p	49973917	49973923	7mer-m8	49973903	49973924	153	-20.11
CAediting_747751	chr10_49973854_+	ENSG00000204152.9	ENST00000478381	hsa-miR-508-5p	49973849	49973855	7mer-m8	49973833	49973856	148	-22.3
CAediting_747718	chr10_49973437_+	ENSG00000204152.9	ENST00000478381	hsa-miR-519d-5p	49973431	49973437	7mer-m8	49973413	49973438	150	-19.25
CAediting_747762	chr10_49973943_+	ENSG00000204152.9	ENST00000478381	hsa-miR-550a-3-5p	49973941	49973948	8mer-1a	49973929	49973948	143	-16.2
CAediting_747763	chr10_49973947_+	ENSG00000204152.9	ENST00000478381	hsa-miR-550a-3-5p	49973941	49973948	8mer-1a	49973929	49973948	143	-16.2
CAediting_747762	chr10_49973943_+	ENSG00000204152.9	ENST00000478381	hsa-miR-550a-5p	49973941	49973948	8mer-1a	49973926	49973948	143	-18.45
CAediting_747763	chr10_49973947_+	ENSG00000204152.9	ENST00000478381	hsa-miR-550a-5p	49973941	49973948	8mer-1a	49973926	49973948	143	-18.45
CAediting_747762	chr10_49973943_+	ENSG00000204152.9	ENST00000478381	hsa-miR-550a-5p	49973941	49973948	8mer-1a	49973926	49973948	143	-18.45
CAediting_747763	chr10_49973947_+	ENSG00000204152.9	ENST00000478381	hsa-miR-550a-5p	49973941	49973948	8mer-1a	49973926	49973948	143	-18.45
CAediting_747763	chr10_49973947_+	ENSG00000204152.9	ENST00000478381	hsa-miR-550b-2-5p	49973942	49973948	7mer-m8	49973928	49973949	148	-17.84
CAediting_747763	chr10_49973947_+	ENSG00000204152.9	ENST00000478381	hsa-miR-550b-2-5p	49973942	49973948	7mer-m8	49973928	49973949	148	-17.84
CAediting_747713	chr10_49973414_+	ENSG00000204152.9	ENST00000478381	hsa-miR-552-3p	49973412	49973419	8mer-1a	49973399	49973419	140	-12.36
CAediting_747745	chr10_49973605_+	ENSG00000204152.9	ENST00000478381	hsa-miR-606	49973601	49973607	7mer-m8	49973588	49973608	145	-13.32
CAediting_747754	chr10_49973881_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6086	49973879	49973885	7mer-m8	49973867	49973886	150	-20.67
CAediting_747730	chr10_49973505_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6088	49973502	49973508	7mer-m8	49973490	49973509	146	-14.96
CAediting_747726	chr10_49973480_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6131	49973475	49973481	7mer-m8	49973464	49973482	140	-17.94
CAediting_747769	chr10_49974023_+	ENSG00000204152.9	ENST00000478381	hsa-miR-638	49974020	49974026	7mer-m8	49974002	49974027	151	-26.66
CAediting_747714	chr10_49973420_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6504-3p	49973415	49973421	7mer-m8	49973401	49973422	149	-12.74
CAediting_747715	chr10_49973421_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6504-3p	49973415	49973421	7mer-m8	49973401	49973422	149	-12.74
CAediting_747751	chr10_49973854_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6512-3p	49973847	49973853	7mer-m8	49973834	49973854	148	-19.46
CAediting_747754	chr10_49973881_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6516-5p	49973875	49973881	7mer-m8	49973863	49973882	153	-18.97
CAediting_747720	chr10_49973447_+	ENSG00000204152.9	ENST00000478381	hsa-miR-660-3p	49973445	49973452	8mer-1a	49973431	49973452	144	-18.82
CAediting_747721	chr10_49973450_+	ENSG00000204152.9	ENST00000478381	hsa-miR-660-3p	49973445	49973452	8mer-1a	49973431	49973452	144	-18.82
CAediting_747751	chr10_49973854_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6720-5p	49973847	49973853	7mer-m8	49973833	49973854	153	-26.48
CAediting_747770	chr10_49974047_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6748-5p	49974041	49974047	7mer-m8	49974023	49974048	154	-24.59
CAediting_747753	chr10_49973871_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6761-5p	49973865	49973871	7mer-m8	49973853	49973872	147	-18.81
CAediting_747770	chr10_49974047_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6769a-5p	49974042	49974048	7mer-m8	49974031	49974049	142	-18.71
CAediting_747770	chr10_49974047_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6769b-5p	49974042	49974048	7mer-m8	49974029	49974049	153	-25.54
CAediting_747759	chr10_49973927_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6779-5p	49973920	49973927	8mer-1a	49973909	49973927	148	-22.58
CAediting_747759	chr10_49973927_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6780a-5p	49973920	49973927	8mer-1a	49973904	49973927	152	-25.37
CAediting_747768	chr10_49973987_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6827-3p	49973985	49973991	7mer-m8	49973972	49973992	153	-18.96
CAediting_747763	chr10_49973947_+	ENSG00000204152.9	ENST00000478381	hsa-miR-6867-5p	49973945	49973951	7mer-m8	49973930	49973952	141	-15.62
CAediting_747744	chr10_49973602_+	ENSG00000204152.9	ENST00000478381	hsa-miR-7155-5p	49973596	49973602	7mer-m8	49973585	49973603	150	-22.89
CAediting_747716	chr10_49973426_+	ENSG00000204152.9	ENST00000478381	hsa-miR-7160-5p	49973422	49973428	7mer-1a	49973408	49973428	144	-25.98
CAediting_747758	chr10_49973919_+	ENSG00000204152.9	ENST00000478381	hsa-miR-7160-5p	49973914	49973920	7mer-m8	49973899	49973921	149	-20.61
CAediting_747758	chr10_49973919_+	ENSG00000204152.9	ENST00000478381	hsa-miR-7162-3p	49973914	49973919	6mer	49973902	49973920	140	-16.4
CAediting_747751	chr10_49973854_+	ENSG00000204152.9	ENST00000478381	hsa-miR-766-3p	49973848	49973854	7mer-m8	49973834	49973855	152	-23.41
CAediting_747746	chr10_49973622_+	ENSG00000204152.9	ENST00000478381	hsa-miR-7705	49973620	49973626	7mer-m8	49973608	49973627	147	-16.49
CAediting_747747	chr10_49973626_+	ENSG00000204152.9	ENST00000478381	hsa-miR-7705	49973620	49973626	7mer-m8	49973608	49973627	147	-16.49
CAediting_747755	chr10_49973901_+	ENSG00000204152.9	ENST00000478381	hsa-miR-7843-3p	49973894	49973901	8mer-1a	49973880	49973901	140	-9.37
CAediting_747759	chr10_49973927_+	ENSG00000204152.9	ENST00000478381	hsa-miR-887-5p	49973921	49973927	7mer-m8	49973909	49973928	143	-19.73
CAediting_747760	chr10_49973928_+	ENSG00000204152.9	ENST00000478381	hsa-miR-887-5p	49973921	49973927	7mer-m8	49973909	49973928	143	-19.73
CAediting_747749	chr10_49973665_+	ENSG00000204152.9	ENST00000478381	hsa-miR-891b	49973663	49973669	7mer-m8	49973650	49973670	154	-14.85

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229414	chr17_67471546_+	ENSG00000204152.9	ENST00000478381	hsa-miR-548aa	49952470	49952476	7mer-m8	49952452	49952477	145	-14.68
CAediting_1160181	chr17_7017644_-	ENSG00000204152.9	ENST00000478381	hsa-miR-195-3p	49973523	49973529	7mer-m8	49973509	49973530	140	-12.71
CAediting_86358	chr1_109598906_+	ENSG00000204152.9	ENST00000478381	hsa-miR-197-5p	49974039	49974046	8mer-1a	49974021	49974046	152	-28.65
CAediting_117844	chr1_162342605_+	ENSG00000204152.9	ENST00000478381	hsa-miR-556-3p	49973485	49973491	7mer-m8	49973472	49973492	150	-16.16
CAediting_524911	chr7_5495852_-	ENSG00000204152.9	ENST00000478381	hsa-miR-589-3p	49973834	49973840	7mer-m8	49973817	49973841	158	-19.59

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_86358	chr1_109598906_+	ENSG00000204152.9	ENST00000478381	hsa-miR-197-5p	49974530	49974536	7mer-m8	49974510	49974537	151	-26.85
CAediting_396018	chr5_1062918_-	ENSG00000204152.9	ENST00000478381	hsa-miR-4635	49973896	49973902	7mer-m8	49973883	49973903	150	-13.2

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TIMM23B

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for TIMM23B

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BLCA	CAediting_747711	chr10_49973404_+	0.00489695275445369	0.317506272341254	.	.	.	.
BRCA	CAediting_747711	chr10_49973404_+	8.86193552782069e-22	0.403127095293557	.	.	.	.
LIHC	CAediting_747711	chr10_49973404_+	1.56126604816895e-09	0.672649206538385	.	.	.	.
CESC	CAediting_747711	chr10_49973404_+	0.013870143934517	0.342551624028363	0.0350628987677712	0.295820376257331	0.0163792489289607	0.33465857850911
LUAD	CAediting_747711	chr10_49973404_+	4.40905553375755e-08	0.432718979545231	.	.	.	.
LUSC	CAediting_747711	chr10_49973404_+	7.70245518938715e-10	0.434842862069573	0.0172511373929798	0.175862444681219	0.0348170372719588	0.156122991018246
THCA	CAediting_747711	chr10_49973404_+	0.00303811704826331	0.224089378391639	.	.	.	.
KIRC	CAediting_747711	chr10_49973404_+	0.00198937744618394	0.272912169157135	.	.	.	.
ESCA	CAediting_747711	chr10_49973404_+	0.00990458185607032	0.222922716716271	.	.	.	.
OV	CAediting_747711	chr10_49973404_+	2.2572133972295e-10	0.369217696988655	.	.	.	.
PCPG	CAediting_747711	chr10_49973404_+	7.01573108605505e-05	0.386844441819001	.	.	.	.
SKCM	CAediting_747711	chr10_49973404_+	0.000149457065152015	0.411488091634914	.	.	.	.
SARC	CAediting_747711	chr10_49973404_+	0.00176684395984695	0.412177480762334	.	.	.	.
TGCT	CAediting_747711	chr10_49973404_+	2.25398053881456e-06	0.531021070986582	.	.	.	.
BRCA	CAediting_747714	chr10_49973420_+	7.03537541698678e-11	0.376864201640826	.	.	.	.
LUAD	CAediting_747714	chr10_49973420_+	0.0389541931411763	0.260825764672422	.	.	.	.
LUSC	CAediting_747714	chr10_49973420_+	0.00628925284201449	0.328193983671509	.	.	.	.
KIRC	CAediting_747714	chr10_49973420_+	0.0117874031074742	0.340380527089908	.	.	.	.
ESCA	CAediting_747714	chr10_49973420_+	0.0200523016990325	0.227768125045734	.	.	.	.
OV	CAediting_747714	chr10_49973420_+	0.0034469907206931	0.212851910811233	.	.	.	.
PCPG	CAediting_747714	chr10_49973420_+	0.0219864098995769	0.25584549184896	0.0461582224638195	0.223617439498617	.	.
BRCA	CAediting_747715	chr10_49973421_+	7.85191904207787e-17	0.413421668283988	.	.	.	.
LUSC	CAediting_747715	chr10_49973421_+	0.00182931322414107	0.285186202213432	.	.	.	.
STAD	CAediting_747715	chr10_49973421_+	0.0348129438949611	0.141098713594349	.	.	.	.
KIRC	CAediting_747715	chr10_49973421_+	0.00101624090021381	0.333622443073855	.	.	.	.
ESCA	CAediting_747715	chr10_49973421_+	0.0222720284714183	0.196625348516972	.	.	.	.
OV	CAediting_747715	chr10_49973421_+	2.8769321103425e-05	0.259741254218939	.	.	.	.
LUAD	CAediting_747720	chr10_49973447_+	.	.	9.34785108374723e-05	0.468779366739084	.	.
STAD	CAediting_747720	chr10_49973447_+	.	.	6.54551459081975e-05	0.401820173561835	.	.
ESCA	CAediting_747720	chr10_49973447_+	.	.	0.00319241178307367	0.374575292953472	.	.
PCPG	CAediting_747720	chr10_49973447_+	.	.	0.0198691454943225	0.258362433501845	0.0375557437292121	0.231523347609202
BRCA	CAediting_747724	chr10_49973474_+	1.64008940179681e-27	0.434844531802575	.	.	.	.
LIHC	CAediting_747724	chr10_49973474_+	7.39117058742829e-07	0.465187999132349	.	.	.	.
LUAD	CAediting_747724	chr10_49973474_+	1.81116507948416e-11	0.445150563891216	.	.	.	.
LUSC	CAediting_747724	chr10_49973474_+	0.000739772317570407	0.242734771833738	.	.	0.00879087567091504	0.189604507288836
PRAD	CAediting_747724	chr10_49973474_+	0.0253507422159751	0.181954644584984	.	.	.	.
THCA	CAediting_747724	chr10_49973474_+	0.00324239209462666	0.199898596061133	.	.	.	.
OV	CAediting_747724	chr10_49973474_+	0.00821340035318852	0.190251179999743	.	.	.	.
PCPG	CAediting_747724	chr10_49973474_+	1.67727492455354e-07	0.442665075964843	0.0490939139673645	0.174304435459984	.	.
SKCM	CAediting_747724	chr10_49973474_+	0.000825700435472277	0.287620758483537	.	.	.	.
SARC	CAediting_747724	chr10_49973474_+	0.00112408993156991	0.404124724560065	.	.	.	.
BLCA	CAediting_747728	chr10_49973494_+	0.000975906670638582	0.349401641366898	0.0319883220281895	0.231489850888451	.	.
LGG	CAediting_747728	chr10_49973494_+	0.0109014555983804	0.19773588637561	.	.	.	.
BRCA	CAediting_747728	chr10_49973494_+	1.2225438169873e-24	0.430025930206629	.	.	.	.
LIHC	CAediting_747728	chr10_49973494_+	0.00409407260532848	0.351464866077603	.	.	.	.
CESC	CAediting_747728	chr10_49973494_+	0.000324492767694268	0.399048080232611	.	.	.	.
LUAD	CAediting_747728	chr10_49973494_+	0.000110570710409175	0.29052499033271	.	.	.	.
COAD	CAediting_747728	chr10_49973494_+	0.0171144429900161	0.301842111523788	.	.	.	.
LUSC	CAediting_747728	chr10_49973494_+	1.80686948724651e-07	0.327175330019771	.	.	.	.
PRAD	CAediting_747728	chr10_49973494_+	0.00740801078456398	0.184746591704282	.	.	.	.
HNSC	CAediting_747728	chr10_49973494_+	0.0193053682070812	0.174745085270104	0.00684017359596949	0.201480060557032	.	.
STAD	CAediting_747728	chr10_49973494_+	0.000584867647605434	0.213883202735275	.	.	.	.
ESCA	CAediting_747728	chr10_49973494_+	2.67900524252954e-05	0.330436103913654	.	.	.	.
OV	CAediting_747728	chr10_49973494_+	1.44267324187726e-05	0.251246195971461	.	.	.	.
PCPG	CAediting_747728	chr10_49973494_+	0.00137024000333348	0.327153303615527	.	.	.	.
SKCM	CAediting_747728	chr10_49973494_+	5.2861734758054e-09	0.452833554237827	.	.	.	.
SARC	CAediting_747728	chr10_49973494_+	7.23580323381156e-06	0.507755197380735	.	.	.	.
TGCT	CAediting_747728	chr10_49973494_+	3.9029269494714e-06	0.552491736984345	.	.	.	.
LUSC	CAediting_747743	chr10_49973592_+	0.0221667098185001	0.247898186632337	.	.	.	.
HNSC	CAediting_747743	chr10_49973592_+	0.0059064705148045	0.36660509868711	.	.	0.000150100726434589	0.489295137868803
BRCA	CAediting_747744	chr10_49973602_+	0.000803389192451576	0.219025194430905	.	.	.	.
LUAD	CAediting_747744	chr10_49973602_+	0.012121118084908	0.284597950078595	.	.	.	.
LUSC	CAediting_747744	chr10_49973602_+	0.00352097422637174	0.264400620872976	.	.	.	.
HNSC	CAediting_747744	chr10_49973602_+	0.0118788965022094	0.264144854548873	.	.	.	.
STAD	CAediting_747744	chr10_49973602_+	.	.	0.000490995882940153	0.307272790632245	.	.
ESCA	CAediting_747744	chr10_49973602_+	.	.	0.0156313397365369	0.236531423680716	.	.
OV	CAediting_747744	chr10_49973602_+	0.000155685506414925	0.278987797935149	.	.	.	.

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Relation with cancer stages for TIMM23B

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BRCA	pathologic_stage	CAediting_747743	chr10_49973592_+	0.0263959694858545	0.192539854103362
CESC	clinical_stage	CAediting_747724	chr10_49973474_+	0.0495238802529026	0.259110332032558
ESCA	clinical_stage	CAediting_747711	chr10_49973404_+	0.0323001100954248	-0.343453375550339
KIRC	pathologic_stage	CAediting_747715	chr10_49973421_+	0.0141921894147617	0.25221294139785
THCA	pathologic_stage	CAediting_747715	chr10_49973421_+	0.0315078863710828	0.24375693783435
THCA	pathologic_stage	CAediting_747724	chr10_49973474_+	0.00262272769239166	0.205648510759697

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Relation with survival for TIMM23B

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for TIMM23B

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for TIMM23B

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene