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Editing gene: MSH5-SAPCD1 (CAeditome ID:100532732)

Gene summary for MSH5-SAPCD1

Gene summary

Gene information	Gene symbol	MSH5-SAPCD1
	Gene ID	100532732
	Gene name	MSH5-SAPCD1 readthrough (NMD candidate)
	Synonyms	MSH5-C6orf26
	Cytomap	6p21.33
	Type of gene	ncRNA
	Description	MSH5-C6orf26 readthrough (non-protein coding)MSH5-SAPCD1 readthrough (non-protein coding)
	Modification date	20210518
	UniProtAcc	.
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for MSH5-SAPCD1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000255152.7

RNA A-to-I editing events in Cancer.

CAediting_468575(31744931, +), CAediting_468576(31744945, +), CAediting_468577(31744986, +), CAediting_468578(31744987, +), CAediting_468579(31744992, +), CAediting_468580(31744996, +), CAediting_468581(31745009, +), CAediting_468582(31745013, +), CAediting_468583(31745045, +), CAediting_468584(31745055, +), CAediting_468585(31745056, +), CAediting_468586(31745973, +), CAediting_468587(31746349, +), CAediting_468588(31746465, +), CAediting_468589(31746478, +), CAediting_468590(31746500, +), CAediting_468591(31746538, +), CAediting_468592(31746539, +), CAediting_468593(31746561, +), CAediting_468594(31746588, +), CAediting_468595(31746897, +), CAediting_468596(31746959, +), CAediting_468597(31747026, +), CAediting_468598(31747732, +), CAediting_468599(31747734, +), CAediting_468600(31747744, +), CAediting_468601(31747750, +), CAediting_468602(31747751, +), CAediting_468603(31747756, +), CAediting_468604(31747772, +), CAediting_468605(31747818, +), CAediting_468606(31747819, +), CAediting_468607(31747826, +), CAediting_468608(31747827, +), CAediting_468609(31747843, +), CAediting_468610(31747844, +), CAediting_468611(31747851, +), CAediting_468612(31747853, +), CAediting_468613(31747857, +), CAediting_468614(31747862, +), CAediting_468615(31747873, +), CAediting_468616(31747883, +), CAediting_468617(31747893, +), CAediting_468618(31747905, +), CAediting_468619(31747925, +), CAediting_468620(31747953, +), CAediting_468621(31747954, +), CAediting_468622(31748402, +), CAediting_468623(31748405, +), CAediting_468624(31748423, +), CAediting_468625(31748429, +), CAediting_468626(31748435, +), CAediting_468627(31748448, +), CAediting_468628(31748449, +), CAediting_468629(31748452, +), CAediting_468630(31748466, +), CAediting_468631(31748474, +), CAediting_468632(31748475, +), CAediting_468633(31748478, +), CAediting_468634(31748488, +), CAediting_468635(31748490, +), CAediting_468636(31748498, +), CAediting_468637(31748529, +), CAediting_468638(31748532, +), CAediting_468639(31748534, +), CAediting_468640(31748546, +), CAediting_468641(31748589, +), CAediting_468642(31748602, +), CAediting_468643(31748603, +), CAediting_468644(31748604, +), CAediting_468645(31748616, +), CAediting_468646(31748618, +), CAediting_468647(31748622, +), CAediting_468648(31748955, +), CAediting_468649(31749015, +), CAediting_468650(31749019, +), CAediting_468651(31749033, +), CAediting_468652(31749045, +), CAediting_468653(31749055, +), CAediting_468654(31749096, +), CAediting_468655(31749099, +), CAediting_468656(31749176, +), CAediting_468657(31749188, +), CAediting_468658(31749190, +), CAediting_468659(31749264, +), CAediting_468660(31749278, +), CAediting_468661(31749286, +), CAediting_468662(31749332, +), CAediting_468663(31749335, +), CAediting_468664(31749341, +), CAediting_468665(31749355, +), CAediting_468666(31749365, +), CAediting_468667(31749366, +), CAediting_468668(31749371, +), CAediting_468669(31749377, +), CAediting_468670(31749383, +), CAediting_468671(31749384, +), CAediting_468672(31749386, +), CAediting_468673(31749389, +), CAediting_468674(31749390, +), CAediting_468675(31749391, +), CAediting_468676(31749392, +), CAediting_468677(31749395, +), CAediting_468678(31749421, +), CAediting_468679(31749424, +), CAediting_468680(31749435, +), CAediting_468681(31749448, +), CAediting_468682(31749454, +), CAediting_468683(31749462, +), CAediting_468684(31749463, +), CAediting_468685(31749474, +), CAediting_468686(31749483, +), CAediting_468687(31749487, +), CAediting_468688(31749521, +), CAediting_468689(31749524, +), CAediting_468690(31749530, +), CAediting_468691(31750291, +), CAediting_468692(31750311, +), CAediting_468693(31750313, +), CAediting_468694(31750335, +), CAediting_468695(31750339, +), CAediting_468696(31750358, +), CAediting_468697(31751012, +), CAediting_468698(31751030, +), CAediting_468699(31751036, +), CAediting_468700(31751044, +), CAediting_468701(31751079, +), CAediting_468702(31751085, +), CAediting_468703(31751125, +), CAediting_468704(31751135, +), CAediting_468705(31751161, +), CAediting_468706(31751162, +), CAediting_468707(31751178, +), CAediting_468708(31751181, +), CAediting_468709(31751195, +), CAediting_468710(31751203, +), CAediting_468711(31751256, +), CAediting_468712(31751257, +), CAediting_468713(31751258, +), CAediting_468714(31751270, +), CAediting_468715(31751380, +), CAediting_468716(31751381, +), CAediting_468717(31751386, +), CAediting_468718(31751389, +), CAediting_468719(31751397, +), CAediting_468720(31751407, +), CAediting_468721(31751450, +), CAediting_468722(31751460, +), CAediting_468723(31751471, +), CAediting_468724(31751474, +), CAediting_468725(31751476, +), CAediting_468726(31751489, +), CAediting_468727(31751515, +), CAediting_468728(31751516, +), CAediting_468729(31751530, +), CAediting_468730(31751557, +), CAediting_468731(31751677, +), CAediting_468732(31751683, +), CAediting_468733(31751699, +), CAediting_468734(31751700, +), CAediting_468735(31751726, +), CAediting_468736(31751773, +), CAediting_468737(31751821, +), CAediting_468738(31751827, +), CAediting_468739(31751830, +), CAediting_468740(31751844, +), CAediting_468741(31751857, +), CAediting_468742(31751870, +), CAediting_468743(31751884, +), CAediting_468744(31751912, +), CAediting_468745(31751913, +), CAediting_468746(31751915, +), CAediting_468747(31751921, +), CAediting_468748(31751923, +), CAediting_468749(31751928, +), CAediting_468750(31751934, +), CAediting_468751(31751937, +), CAediting_468752(31751938, +), CAediting_468753(31751939, +), CAediting_468754(31751943, +), CAediting_468755(31751946, +), CAediting_468756(31751947, +), CAediting_468757(31751952, +), CAediting_468758(31751960, +), CAediting_468759(31751978, +), CAediting_468760(31752014, +), CAediting_468761(31752018, +), CAediting_468762(31752019, +), CAediting_468763(31752064, +), CAediting_468764(31752185, +), CAediting_468765(31752186, +), CAediting_468766(31752263, +), CAediting_468767(31752288, +), CAediting_468768(31752292, +), CAediting_468769(31752351, +), CAediting_468770(31752393, +), CAediting_468771(31752459, +), CAediting_468772(31752510, +), CAediting_468773(31752511, +), CAediting_468774(31752513, +), CAediting_468775(31752533, +), CAediting_468776(31752544, +), CAediting_468777(31752555, +), CAediting_468778(31752558, +), CAediting_468779(31752559, +), CAediting_468780(31752560, +), CAediting_468781(31752561, +), CAediting_468782(31752562, +), CAediting_468783(31752564, +), CAediting_468784(31752567, +), CAediting_468785(31752573, +), CAediting_468786(31752593, +), CAediting_468787(31752605, +), CAediting_468788(31752630, +), CAediting_468789(31752635, +), CAediting_468790(31752640, +), CAediting_468791(31752665, +), CAediting_468792(31752702, +), CAediting_468793(31752703, +), CAediting_468794(31753750, +), CAediting_468795(31753809, +), CAediting_468796(31753868, +), CAediting_468797(31753881, +), CAediting_468798(31753906, +), CAediting_468799(31753915, +), CAediting_468800(31753926, +), CAediting_468801(31753969, +), CAediting_468802(31753978, +), CAediting_468803(31753987, +), CAediting_468804(31754000, +), CAediting_468805(31754214, +), CAediting_468806(31754229, +), CAediting_468807(31754230, +), CAediting_468808(31754243, +), CAediting_468809(31754249, +), CAediting_468810(31754250, +), CAediting_468811(31754289, +), CAediting_468812(31754333, +), CAediting_468813(31754347, +), CAediting_468814(31754385, +), CAediting_468815(31754418, +), CAediting_468816(31754531, +), CAediting_468817(31754532, +), CAediting_468818(31754536, +), CAediting_468819(31754560, +), CAediting_468820(31754615, +), CAediting_468821(31754654, +), CAediting_468822(31754851, +), CAediting_468823(31754852, +), CAediting_468824(31754881, +), CAediting_468825(31754937, +), CAediting_468826(31754943, +), CAediting_468827(31755026, +), CAediting_468828(31755175, +), CAediting_468829(31755183, +), CAediting_468830(31755191, +), CAediting_468831(31755251, +), CAediting_468832(31755252, +), CAediting_468833(31755269, +), CAediting_468834(31755462, +), CAediting_468835(31755463, +), CAediting_468836(31755545, +), CAediting_468837(31755598, +), CAediting_468838(31755622, +), CAediting_468839(31755624, +), CAediting_468840(31755636, +), CAediting_468841(31755696, +), CAediting_468842(31755706, +), CAediting_468843(31755716, +), CAediting_468844(31755717, +), CAediting_468845(31755718, +), CAediting_468846(31755731, +), CAediting_468847(31755758, +), CAediting_468848(31756221, +), CAediting_468849(31756265, +), CAediting_468850(31756270, +), CAediting_468851(31756271, +), CAediting_468852(31756288, +), CAediting_468853(31756311, +), CAediting_468854(31756337, +), CAediting_468855(31756346, +), CAediting_468856(31756352, +), CAediting_468857(31756355, +), CAediting_468858(31756372, +), CAediting_468859(31756406, +), CAediting_468860(31756434, +), CAediting_468861(31756448, +), CAediting_468862(31756659, +), CAediting_468863(31756699, +), CAediting_468864(31756745, +), CAediting_468865(31756758, +), CAediting_468866(31756770, +), CAediting_468867(31756838, +), CAediting_468868(31756882, +), CAediting_468869(31756899, +), CAediting_468870(31756900, +), CAediting_468871(31756901, +), CAediting_468872(31756913, +), CAediting_468873(31757164, +), CAediting_468874(31757257, +), CAediting_468875(31757284, +), CAediting_468876(31757310, +), CAediting_468877(31757335, +), CAediting_468878(31757343, +), CAediting_468879(31757351, +), CAediting_468880(31757406, +), CAediting_468881(31757418, +), CAediting_468882(31757698, +), CAediting_468883(31757795, +), CAediting_468884(31757922, +), CAediting_468885(31757950, +),

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RNA editing positional annotations for MSH5-SAPCD1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_468575	chr6_31744931_+	ncRNA_intronic
CAediting_468576	chr6_31744945_+	ncRNA_intronic
CAediting_468577	chr6_31744986_+	ncRNA_intronic
CAediting_468578	chr6_31744987_+	ncRNA_intronic
CAediting_468579	chr6_31744992_+	ncRNA_intronic
CAediting_468580	chr6_31744996_+	ncRNA_intronic
CAediting_468581	chr6_31745009_+	ncRNA_intronic
CAediting_468582	chr6_31745013_+	ncRNA_intronic
CAediting_468583	chr6_31745045_+	ncRNA_intronic
CAediting_468584	chr6_31745055_+	ncRNA_intronic
CAediting_468585	chr6_31745056_+	ncRNA_intronic
CAediting_468586	chr6_31745973_+	ncRNA_intronic
CAediting_468587	chr6_31746349_+	intronic
CAediting_468588	chr6_31746465_+	intronic
CAediting_468589	chr6_31746478_+	intronic
CAediting_468590	chr6_31746500_+	intronic
CAediting_468591	chr6_31746538_+	intronic
CAediting_468592	chr6_31746539_+	intronic
CAediting_468593	chr6_31746561_+	intronic
CAediting_468594	chr6_31746588_+	intronic
CAediting_468595	chr6_31746897_+	intronic
CAediting_468596	chr6_31746959_+	intronic
CAediting_468597	chr6_31747026_+	intronic
CAediting_468598	chr6_31747732_+	intronic
CAediting_468599	chr6_31747734_+	intronic
CAediting_468600	chr6_31747744_+	intronic
CAediting_468601	chr6_31747750_+	intronic
CAediting_468602	chr6_31747751_+	intronic
CAediting_468603	chr6_31747756_+	intronic
CAediting_468604	chr6_31747772_+	intronic
CAediting_468605	chr6_31747818_+	intronic
CAediting_468606	chr6_31747819_+	intronic
CAediting_468607	chr6_31747826_+	intronic
CAediting_468608	chr6_31747827_+	intronic
CAediting_468609	chr6_31747843_+	intronic
CAediting_468610	chr6_31747844_+	intronic
CAediting_468611	chr6_31747851_+	intronic
CAediting_468612	chr6_31747853_+	intronic
CAediting_468613	chr6_31747857_+	intronic
CAediting_468614	chr6_31747862_+	intronic
CAediting_468615	chr6_31747873_+	intronic
CAediting_468616	chr6_31747883_+	intronic
CAediting_468617	chr6_31747893_+	intronic
CAediting_468618	chr6_31747905_+	intronic
CAediting_468619	chr6_31747925_+	intronic
CAediting_468620	chr6_31747953_+	intronic
CAediting_468621	chr6_31747954_+	intronic
CAediting_468622	chr6_31748402_+	intronic
CAediting_468623	chr6_31748405_+	intronic
CAediting_468624	chr6_31748423_+	intronic
CAediting_468625	chr6_31748429_+	intronic
CAediting_468626	chr6_31748435_+	intronic
CAediting_468627	chr6_31748448_+	intronic
CAediting_468628	chr6_31748449_+	intronic
CAediting_468629	chr6_31748452_+	intronic
CAediting_468630	chr6_31748466_+	intronic
CAediting_468631	chr6_31748474_+	intronic
CAediting_468632	chr6_31748475_+	intronic
CAediting_468633	chr6_31748478_+	intronic
CAediting_468634	chr6_31748488_+	intronic
CAediting_468635	chr6_31748490_+	intronic
CAediting_468636	chr6_31748498_+	intronic
CAediting_468637	chr6_31748529_+	intronic
CAediting_468638	chr6_31748532_+	intronic
CAediting_468639	chr6_31748534_+	intronic
CAediting_468640	chr6_31748546_+	intronic
CAediting_468641	chr6_31748589_+	intronic
CAediting_468642	chr6_31748602_+	intronic
CAediting_468643	chr6_31748603_+	intronic
CAediting_468644	chr6_31748604_+	intronic
CAediting_468645	chr6_31748616_+	intronic
CAediting_468646	chr6_31748618_+	intronic
CAediting_468647	chr6_31748622_+	intronic
CAediting_468648	chr6_31748955_+	intronic
CAediting_468649	chr6_31749015_+	intronic
CAediting_468650	chr6_31749019_+	intronic
CAediting_468651	chr6_31749033_+	intronic
CAediting_468652	chr6_31749045_+	intronic
CAediting_468653	chr6_31749055_+	intronic
CAediting_468654	chr6_31749096_+	intronic
CAediting_468655	chr6_31749099_+	intronic
CAediting_468656	chr6_31749176_+	intronic
CAediting_468657	chr6_31749188_+	intronic
CAediting_468658	chr6_31749190_+	intronic
CAediting_468659	chr6_31749264_+	intronic
CAediting_468660	chr6_31749278_+	intronic
CAediting_468661	chr6_31749286_+	intronic
CAediting_468662	chr6_31749332_+	intronic
CAediting_468663	chr6_31749335_+	intronic
CAediting_468664	chr6_31749341_+	intronic
CAediting_468665	chr6_31749355_+	intronic
CAediting_468666	chr6_31749365_+	intronic
CAediting_468667	chr6_31749366_+	intronic
CAediting_468668	chr6_31749371_+	intronic
CAediting_468669	chr6_31749377_+	intronic
CAediting_468670	chr6_31749383_+	intronic
CAediting_468671	chr6_31749384_+	intronic
CAediting_468672	chr6_31749386_+	intronic
CAediting_468673	chr6_31749389_+	intronic
CAediting_468674	chr6_31749390_+	intronic
CAediting_468675	chr6_31749391_+	intronic
CAediting_468676	chr6_31749392_+	intronic
CAediting_468677	chr6_31749395_+	intronic
CAediting_468678	chr6_31749421_+	intronic
CAediting_468679	chr6_31749424_+	intronic
CAediting_468680	chr6_31749435_+	intronic
CAediting_468681	chr6_31749448_+	intronic
CAediting_468682	chr6_31749454_+	intronic
CAediting_468683	chr6_31749462_+	intronic
CAediting_468684	chr6_31749463_+	intronic
CAediting_468685	chr6_31749474_+	intronic
CAediting_468686	chr6_31749483_+	intronic
CAediting_468687	chr6_31749487_+	intronic
CAediting_468688	chr6_31749521_+	intronic
CAediting_468689	chr6_31749524_+	intronic
CAediting_468690	chr6_31749530_+	intronic
CAediting_468691	chr6_31750291_+	intronic
CAediting_468692	chr6_31750311_+	intronic
CAediting_468693	chr6_31750313_+	intronic
CAediting_468694	chr6_31750335_+	intronic
CAediting_468695	chr6_31750339_+	intronic
CAediting_468696	chr6_31750358_+	intronic
CAediting_468697	chr6_31751012_+	intronic
CAediting_468698	chr6_31751030_+	intronic
CAediting_468699	chr6_31751036_+	intronic
CAediting_468700	chr6_31751044_+	intronic
CAediting_468701	chr6_31751079_+	intronic
CAediting_468702	chr6_31751085_+	intronic
CAediting_468703	chr6_31751125_+	intronic
CAediting_468704	chr6_31751135_+	intronic
CAediting_468705	chr6_31751161_+	intronic
CAediting_468706	chr6_31751162_+	intronic
CAediting_468707	chr6_31751178_+	intronic
CAediting_468708	chr6_31751181_+	intronic
CAediting_468709	chr6_31751195_+	intronic
CAediting_468710	chr6_31751203_+	intronic
CAediting_468711	chr6_31751256_+	intronic
CAediting_468712	chr6_31751257_+	intronic
CAediting_468713	chr6_31751258_+	intronic
CAediting_468714	chr6_31751270_+	intronic
CAediting_468715	chr6_31751380_+	intronic
CAediting_468716	chr6_31751381_+	intronic
CAediting_468717	chr6_31751386_+	intronic
CAediting_468718	chr6_31751389_+	intronic
CAediting_468719	chr6_31751397_+	intronic
CAediting_468720	chr6_31751407_+	intronic
CAediting_468721	chr6_31751450_+	intronic
CAediting_468722	chr6_31751460_+	intronic
CAediting_468723	chr6_31751471_+	intronic
CAediting_468724	chr6_31751474_+	intronic
CAediting_468725	chr6_31751476_+	intronic
CAediting_468726	chr6_31751489_+	intronic
CAediting_468727	chr6_31751515_+	ncRNA_exonic
CAediting_468728	chr6_31751516_+	ncRNA_exonic
CAediting_468729	chr6_31751530_+	ncRNA_exonic
CAediting_468730	chr6_31751557_+	ncRNA_exonic
CAediting_468731	chr6_31751677_+	ncRNA_intronic
CAediting_468732	chr6_31751683_+	ncRNA_intronic
CAediting_468733	chr6_31751699_+	ncRNA_intronic
CAediting_468734	chr6_31751700_+	ncRNA_intronic
CAediting_468735	chr6_31751726_+	ncRNA_intronic
CAediting_468736	chr6_31751773_+	ncRNA_intronic
CAediting_468737	chr6_31751821_+	ncRNA_intronic
CAediting_468738	chr6_31751827_+	ncRNA_intronic
CAediting_468739	chr6_31751830_+	ncRNA_intronic
CAediting_468740	chr6_31751844_+	ncRNA_intronic
CAediting_468741	chr6_31751857_+	ncRNA_intronic
CAediting_468742	chr6_31751870_+	ncRNA_intronic
CAediting_468743	chr6_31751884_+	ncRNA_intronic
CAediting_468744	chr6_31751912_+	ncRNA_intronic
CAediting_468745	chr6_31751913_+	ncRNA_intronic
CAediting_468746	chr6_31751915_+	ncRNA_intronic
CAediting_468747	chr6_31751921_+	ncRNA_intronic
CAediting_468748	chr6_31751923_+	ncRNA_intronic
CAediting_468749	chr6_31751928_+	ncRNA_intronic
CAediting_468750	chr6_31751934_+	ncRNA_intronic
CAediting_468751	chr6_31751937_+	ncRNA_intronic
CAediting_468752	chr6_31751938_+	ncRNA_intronic
CAediting_468753	chr6_31751939_+	ncRNA_intronic
CAediting_468754	chr6_31751943_+	ncRNA_intronic
CAediting_468755	chr6_31751946_+	ncRNA_intronic
CAediting_468756	chr6_31751947_+	ncRNA_intronic
CAediting_468757	chr6_31751952_+	ncRNA_intronic
CAediting_468758	chr6_31751960_+	ncRNA_intronic
CAediting_468759	chr6_31751978_+	ncRNA_intronic
CAediting_468760	chr6_31752014_+	ncRNA_intronic
CAediting_468761	chr6_31752018_+	ncRNA_intronic
CAediting_468762	chr6_31752019_+	ncRNA_intronic
CAediting_468763	chr6_31752064_+	ncRNA_intronic
CAediting_468764	chr6_31752185_+	ncRNA_intronic
CAediting_468765	chr6_31752186_+	ncRNA_intronic
CAediting_468766	chr6_31752263_+	ncRNA_intronic
CAediting_468767	chr6_31752288_+	ncRNA_intronic
CAediting_468768	chr6_31752292_+	ncRNA_intronic
CAediting_468769	chr6_31752351_+	ncRNA_intronic
CAediting_468770	chr6_31752393_+	ncRNA_intronic
CAediting_468771	chr6_31752459_+	ncRNA_intronic
CAediting_468772	chr6_31752510_+	ncRNA_intronic
CAediting_468773	chr6_31752511_+	ncRNA_intronic
CAediting_468774	chr6_31752513_+	ncRNA_intronic
CAediting_468775	chr6_31752533_+	ncRNA_intronic
CAediting_468776	chr6_31752544_+	ncRNA_intronic
CAediting_468777	chr6_31752555_+	ncRNA_intronic
CAediting_468778	chr6_31752558_+	ncRNA_intronic
CAediting_468779	chr6_31752559_+	ncRNA_intronic
CAediting_468780	chr6_31752560_+	ncRNA_intronic
CAediting_468781	chr6_31752561_+	ncRNA_intronic
CAediting_468782	chr6_31752562_+	ncRNA_intronic
CAediting_468783	chr6_31752564_+	ncRNA_intronic
CAediting_468784	chr6_31752567_+	ncRNA_intronic
CAediting_468785	chr6_31752573_+	ncRNA_intronic
CAediting_468786	chr6_31752593_+	ncRNA_intronic
CAediting_468787	chr6_31752605_+	ncRNA_intronic
CAediting_468788	chr6_31752630_+	ncRNA_intronic
CAediting_468789	chr6_31752635_+	ncRNA_intronic
CAediting_468790	chr6_31752640_+	ncRNA_intronic
CAediting_468791	chr6_31752665_+	ncRNA_intronic
CAediting_468792	chr6_31752702_+	ncRNA_intronic
CAediting_468793	chr6_31752703_+	ncRNA_intronic
CAediting_468794	chr6_31753750_+	ncRNA_intronic
CAediting_468795	chr6_31753809_+	ncRNA_intronic
CAediting_468796	chr6_31753868_+	ncRNA_intronic
CAediting_468797	chr6_31753881_+	ncRNA_intronic
CAediting_468798	chr6_31753906_+	ncRNA_intronic
CAediting_468799	chr6_31753915_+	ncRNA_intronic
CAediting_468800	chr6_31753926_+	ncRNA_intronic
CAediting_468801	chr6_31753969_+	ncRNA_intronic
CAediting_468802	chr6_31753978_+	ncRNA_intronic
CAediting_468803	chr6_31753987_+	ncRNA_intronic
CAediting_468804	chr6_31754000_+	ncRNA_intronic
CAediting_468805	chr6_31754214_+	ncRNA_intronic
CAediting_468806	chr6_31754229_+	ncRNA_intronic
CAediting_468807	chr6_31754230_+	ncRNA_intronic
CAediting_468808	chr6_31754243_+	ncRNA_intronic
CAediting_468809	chr6_31754249_+	ncRNA_intronic
CAediting_468810	chr6_31754250_+	ncRNA_intronic
CAediting_468811	chr6_31754289_+	ncRNA_intronic
CAediting_468812	chr6_31754333_+	ncRNA_intronic
CAediting_468813	chr6_31754347_+	ncRNA_intronic
CAediting_468814	chr6_31754385_+	ncRNA_intronic
CAediting_468815	chr6_31754418_+	ncRNA_intronic
CAediting_468816	chr6_31754531_+	ncRNA_intronic
CAediting_468817	chr6_31754532_+	ncRNA_intronic
CAediting_468818	chr6_31754536_+	ncRNA_intronic
CAediting_468819	chr6_31754560_+	ncRNA_intronic
CAediting_468820	chr6_31754615_+	ncRNA_intronic
CAediting_468821	chr6_31754654_+	ncRNA_intronic
CAediting_468822	chr6_31754851_+	ncRNA_intronic
CAediting_468823	chr6_31754852_+	ncRNA_intronic
CAediting_468824	chr6_31754881_+	ncRNA_intronic
CAediting_468825	chr6_31754937_+	ncRNA_intronic
CAediting_468826	chr6_31754943_+	ncRNA_intronic
CAediting_468827	chr6_31755026_+	ncRNA_intronic
CAediting_468828	chr6_31755175_+	ncRNA_intronic
CAediting_468829	chr6_31755183_+	ncRNA_intronic
CAediting_468830	chr6_31755191_+	ncRNA_intronic
CAediting_468831	chr6_31755251_+	ncRNA_intronic
CAediting_468832	chr6_31755252_+	ncRNA_intronic
CAediting_468833	chr6_31755269_+	ncRNA_intronic
CAediting_468834	chr6_31755462_+	ncRNA_intronic
CAediting_468835	chr6_31755463_+	ncRNA_intronic
CAediting_468836	chr6_31755545_+	ncRNA_intronic
CAediting_468837	chr6_31755598_+	ncRNA_intronic
CAediting_468838	chr6_31755622_+	ncRNA_intronic
CAediting_468839	chr6_31755624_+	ncRNA_intronic
CAediting_468840	chr6_31755636_+	ncRNA_intronic
CAediting_468841	chr6_31755696_+	ncRNA_intronic
CAediting_468842	chr6_31755706_+	ncRNA_intronic
CAediting_468843	chr6_31755716_+	ncRNA_intronic
CAediting_468844	chr6_31755717_+	ncRNA_intronic
CAediting_468845	chr6_31755718_+	ncRNA_intronic
CAediting_468846	chr6_31755731_+	ncRNA_intronic
CAediting_468847	chr6_31755758_+	ncRNA_intronic
CAediting_468848	chr6_31756221_+	ncRNA_intronic
CAediting_468849	chr6_31756265_+	ncRNA_intronic
CAediting_468850	chr6_31756270_+	ncRNA_intronic
CAediting_468851	chr6_31756271_+	ncRNA_intronic
CAediting_468852	chr6_31756288_+	ncRNA_intronic
CAediting_468853	chr6_31756311_+	ncRNA_intronic
CAediting_468854	chr6_31756337_+	ncRNA_intronic
CAediting_468855	chr6_31756346_+	ncRNA_intronic
CAediting_468856	chr6_31756352_+	ncRNA_intronic
CAediting_468857	chr6_31756355_+	ncRNA_intronic
CAediting_468858	chr6_31756372_+	ncRNA_intronic
CAediting_468859	chr6_31756406_+	ncRNA_intronic
CAediting_468860	chr6_31756434_+	ncRNA_intronic
CAediting_468861	chr6_31756448_+	ncRNA_intronic
CAediting_468862	chr6_31756659_+	ncRNA_intronic
CAediting_468863	chr6_31756699_+	ncRNA_intronic
CAediting_468864	chr6_31756745_+	ncRNA_intronic
CAediting_468865	chr6_31756758_+	ncRNA_intronic
CAediting_468866	chr6_31756770_+	ncRNA_intronic
CAediting_468867	chr6_31756838_+	ncRNA_intronic
CAediting_468868	chr6_31756882_+	ncRNA_intronic
CAediting_468869	chr6_31756899_+	ncRNA_intronic
CAediting_468870	chr6_31756900_+	ncRNA_intronic
CAediting_468871	chr6_31756901_+	ncRNA_intronic
CAediting_468872	chr6_31756913_+	ncRNA_intronic
CAediting_468873	chr6_31757164_+	ncRNA_intronic
CAediting_468874	chr6_31757257_+	ncRNA_intronic
CAediting_468875	chr6_31757284_+	ncRNA_intronic
CAediting_468876	chr6_31757310_+	ncRNA_intronic
CAediting_468877	chr6_31757335_+	ncRNA_intronic
CAediting_468878	chr6_31757343_+	ncRNA_intronic
CAediting_468879	chr6_31757351_+	ncRNA_intronic
CAediting_468880	chr6_31757406_+	ncRNA_intronic
CAediting_468881	chr6_31757418_+	ncRNA_intronic
CAediting_468882	chr6_31757698_+	ncRNA_intronic
CAediting_468883	chr6_31757795_+	ncRNA_intronic
CAediting_468884	chr6_31757922_+	ncRNA_intronic
CAediting_468885	chr6_31757950_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_468575	chr6_31744931_+	SINE	Alu	AluSx
CAediting_468576	chr6_31744945_+	SINE	Alu	AluSx
CAediting_468577	chr6_31744986_+	SINE	Alu	AluSx
CAediting_468578	chr6_31744987_+	SINE	Alu	AluSx
CAediting_468579	chr6_31744992_+	SINE	Alu	AluSx
CAediting_468580	chr6_31744996_+	SINE	Alu	AluSx
CAediting_468581	chr6_31745009_+	SINE	Alu	AluSx
CAediting_468582	chr6_31745013_+	SINE	Alu	AluSx
CAediting_468583	chr6_31745045_+	SINE	Alu	AluSx
CAediting_468584	chr6_31745055_+	SINE	Alu	AluSx
CAediting_468585	chr6_31745056_+	SINE	Alu	AluSx
CAediting_468586	chr6_31745973_+	SINE	Alu	AluY
CAediting_468587	chr6_31746349_+	SINE	Alu	AluSq10
CAediting_468588	chr6_31746465_+	SINE	Alu	AluSz
CAediting_468589	chr6_31746478_+	SINE	Alu	AluSz
CAediting_468590	chr6_31746500_+	SINE	Alu	AluSz
CAediting_468591	chr6_31746538_+	SINE	Alu	AluSz
CAediting_468592	chr6_31746539_+	SINE	Alu	AluSz
CAediting_468593	chr6_31746561_+	SINE	Alu	AluSz
CAediting_468594	chr6_31746588_+	SINE	Alu	AluSz
CAediting_468595	chr6_31746897_+	SINE	Alu	AluY
CAediting_468596	chr6_31746959_+	SINE	Alu	AluY
CAediting_468597	chr6_31747026_+	SINE	Alu	AluY
CAediting_468598	chr6_31747732_+	SINE	Alu	AluSx1
CAediting_468599	chr6_31747734_+	SINE	Alu	AluSx1
CAediting_468600	chr6_31747744_+	SINE	Alu	AluSx1
CAediting_468601	chr6_31747750_+	SINE	Alu	AluSx1
CAediting_468602	chr6_31747751_+	SINE	Alu	AluSx1
CAediting_468603	chr6_31747756_+	SINE	Alu	AluSx1
CAediting_468604	chr6_31747772_+	SINE	Alu	AluSx1
CAediting_468605	chr6_31747818_+	SINE	Alu	AluSx1
CAediting_468606	chr6_31747819_+	SINE	Alu	AluSx1
CAediting_468607	chr6_31747826_+	SINE	Alu	AluSx1
CAediting_468608	chr6_31747827_+	SINE	Alu	AluSx1
CAediting_468609	chr6_31747843_+	SINE	Alu	AluSx1
CAediting_468610	chr6_31747844_+	SINE	Alu	AluSx1
CAediting_468611	chr6_31747851_+	SINE	Alu	AluSx1
CAediting_468612	chr6_31747853_+	SINE	Alu	AluSx1
CAediting_468613	chr6_31747857_+	SINE	Alu	AluSx1
CAediting_468614	chr6_31747862_+	SINE	Alu	AluSx1
CAediting_468615	chr6_31747873_+	SINE	Alu	AluSx1
CAediting_468616	chr6_31747883_+	SINE	Alu	AluSx1
CAediting_468617	chr6_31747893_+	SINE	Alu	AluSx1
CAediting_468618	chr6_31747905_+	SINE	Alu	AluSx1
CAediting_468619	chr6_31747925_+	SINE	Alu	AluSx1
CAediting_468620	chr6_31747953_+	SINE	Alu	AluSx1
CAediting_468621	chr6_31747954_+	SINE	Alu	AluSx1
CAediting_468622	chr6_31748402_+	SINE	Alu	AluSq2
CAediting_468623	chr6_31748405_+	SINE	Alu	AluSq2
CAediting_468624	chr6_31748423_+	SINE	Alu	AluSq2
CAediting_468625	chr6_31748429_+	SINE	Alu	AluSq2
CAediting_468626	chr6_31748435_+	SINE	Alu	AluSq2
CAediting_468627	chr6_31748448_+	SINE	Alu	AluSq2
CAediting_468628	chr6_31748449_+	SINE	Alu	AluSq2
CAediting_468629	chr6_31748452_+	SINE	Alu	AluSq2
CAediting_468630	chr6_31748466_+	SINE	Alu	AluSq2
CAediting_468631	chr6_31748474_+	SINE	Alu	AluSq2
CAediting_468632	chr6_31748475_+	SINE	Alu	AluSq2
CAediting_468633	chr6_31748478_+	SINE	Alu	AluSq2
CAediting_468634	chr6_31748488_+	SINE	Alu	AluSq2
CAediting_468635	chr6_31748490_+	SINE	Alu	AluSq2
CAediting_468636	chr6_31748498_+	SINE	Alu	AluSq2
CAediting_468637	chr6_31748529_+	SINE	Alu	AluSq2
CAediting_468638	chr6_31748532_+	SINE	Alu	AluSq2
CAediting_468639	chr6_31748534_+	SINE	Alu	AluSq2
CAediting_468640	chr6_31748546_+	SINE	Alu	AluSq2
CAediting_468641	chr6_31748589_+	SINE	Alu	AluSq2
CAediting_468642	chr6_31748602_+	SINE	Alu	AluSq2
CAediting_468643	chr6_31748603_+	SINE	Alu	AluSq2
CAediting_468644	chr6_31748604_+	SINE	Alu	AluSq2
CAediting_468645	chr6_31748616_+	SINE	Alu	AluSq2
CAediting_468646	chr6_31748618_+	SINE	Alu	AluSq2
CAediting_468647	chr6_31748622_+	SINE	Alu	AluSq2
CAediting_468648	chr6_31748955_+	SINE	Alu	AluSg
CAediting_468649	chr6_31749015_+	SINE	Alu	AluSg
CAediting_468650	chr6_31749019_+	SINE	Alu	AluSg
CAediting_468651	chr6_31749033_+	SINE	Alu	AluSg
CAediting_468652	chr6_31749045_+	SINE	Alu	AluSg
CAediting_468653	chr6_31749055_+	SINE	Alu	AluSg
CAediting_468654	chr6_31749096_+	SINE	Alu	AluSg
CAediting_468655	chr6_31749099_+	SINE	Alu	AluSg
CAediting_468656	chr6_31749176_+	SINE	Alu	AluSg
CAediting_468657	chr6_31749188_+	SINE	Alu	AluSg
CAediting_468658	chr6_31749190_+	SINE	Alu	AluSg
CAediting_468659	chr6_31749264_+	SINE	Alu	AluSz
CAediting_468660	chr6_31749278_+	SINE	Alu	AluSz
CAediting_468661	chr6_31749286_+	SINE	Alu	AluSz
CAediting_468662	chr6_31749332_+	SINE	Alu	AluSz
CAediting_468663	chr6_31749335_+	SINE	Alu	AluSz
CAediting_468664	chr6_31749341_+	SINE	Alu	AluSz
CAediting_468665	chr6_31749355_+	SINE	Alu	AluSz
CAediting_468666	chr6_31749365_+	SINE	Alu	AluSz
CAediting_468667	chr6_31749366_+	SINE	Alu	AluSz
CAediting_468668	chr6_31749371_+	SINE	Alu	AluSz
CAediting_468669	chr6_31749377_+	SINE	Alu	AluSz
CAediting_468670	chr6_31749383_+	SINE	Alu	AluSz
CAediting_468671	chr6_31749384_+	SINE	Alu	AluSz
CAediting_468672	chr6_31749386_+	SINE	Alu	AluSz
CAediting_468673	chr6_31749389_+	SINE	Alu	AluSz
CAediting_468674	chr6_31749390_+	SINE	Alu	AluSz
CAediting_468675	chr6_31749391_+	SINE	Alu	AluSz
CAediting_468676	chr6_31749392_+	SINE	Alu	AluSz
CAediting_468677	chr6_31749395_+	SINE	Alu	AluSz
CAediting_468678	chr6_31749421_+	SINE	Alu	AluSz
CAediting_468679	chr6_31749424_+	SINE	Alu	AluSz
CAediting_468680	chr6_31749435_+	SINE	Alu	AluSz
CAediting_468681	chr6_31749448_+	SINE	Alu	AluSz
CAediting_468682	chr6_31749454_+	SINE	Alu	AluSz
CAediting_468683	chr6_31749462_+	SINE	Alu	AluSz
CAediting_468684	chr6_31749463_+	SINE	Alu	AluSz
CAediting_468685	chr6_31749474_+	SINE	Alu	AluSz
CAediting_468686	chr6_31749483_+	SINE	Alu	AluSz
CAediting_468687	chr6_31749487_+	SINE	Alu	AluSz
CAediting_468688	chr6_31749521_+	SINE	Alu	AluSz
CAediting_468689	chr6_31749524_+	SINE	Alu	AluSz
CAediting_468690	chr6_31749530_+	SINE	Alu	AluSz
CAediting_468691	chr6_31750291_+	SINE	Alu	FLAM_C
CAediting_468692	chr6_31750311_+	SINE	Alu	FLAM_C
CAediting_468693	chr6_31750313_+	SINE	Alu	FLAM_C
CAediting_468694	chr6_31750335_+	SINE	Alu	FLAM_C
CAediting_468695	chr6_31750339_+	SINE	Alu	FLAM_C
CAediting_468696	chr6_31750358_+	SINE	Alu	FLAM_C
CAediting_468697	chr6_31751012_+	SINE	Alu	AluY
CAediting_468698	chr6_31751030_+	SINE	Alu	AluY
CAediting_468699	chr6_31751036_+	SINE	Alu	AluY
CAediting_468700	chr6_31751044_+	SINE	Alu	AluY
CAediting_468701	chr6_31751079_+	SINE	Alu	AluY
CAediting_468702	chr6_31751085_+	SINE	Alu	AluY
CAediting_468703	chr6_31751125_+	SINE	Alu	AluY
CAediting_468704	chr6_31751135_+	SINE	Alu	AluY
CAediting_468705	chr6_31751161_+	SINE	Alu	AluY
CAediting_468706	chr6_31751162_+	SINE	Alu	AluY
CAediting_468707	chr6_31751178_+	SINE	Alu	AluY
CAediting_468708	chr6_31751181_+	SINE	Alu	AluY
CAediting_468709	chr6_31751195_+	SINE	Alu	AluY
CAediting_468710	chr6_31751203_+	SINE	Alu	AluY
CAediting_468711	chr6_31751256_+	SINE	Alu	AluY
CAediting_468712	chr6_31751257_+	SINE	Alu	AluY
CAediting_468713	chr6_31751258_+	SINE	Alu	AluY
CAediting_468714	chr6_31751270_+	SINE	Alu	AluY
CAediting_468715	chr6_31751380_+	SINE	Alu	AluSx
CAediting_468716	chr6_31751381_+	SINE	Alu	AluSx
CAediting_468717	chr6_31751386_+	SINE	Alu	AluSx
CAediting_468718	chr6_31751389_+	SINE	Alu	AluSx
CAediting_468719	chr6_31751397_+	SINE	Alu	AluSx
CAediting_468720	chr6_31751407_+	SINE	Alu	AluSx
CAediting_468721	chr6_31751450_+	SINE	Alu	AluSx
CAediting_468722	chr6_31751460_+	SINE	Alu	AluSx
CAediting_468723	chr6_31751471_+	SINE	Alu	AluSx
CAediting_468724	chr6_31751474_+	SINE	Alu	AluSx
CAediting_468725	chr6_31751476_+	SINE	Alu	AluSx
CAediting_468726	chr6_31751489_+	SINE	Alu	AluSx
CAediting_468727	chr6_31751515_+	SINE	Alu	AluSx
CAediting_468728	chr6_31751516_+	SINE	Alu	AluSx
CAediting_468729	chr6_31751530_+	SINE	Alu	AluSx
CAediting_468730	chr6_31751557_+	SINE	Alu	AluSx
CAediting_468731	chr6_31751677_+	SINE	Alu	AluJr
CAediting_468732	chr6_31751683_+	SINE	Alu	AluJr
CAediting_468733	chr6_31751699_+	SINE	Alu	AluJr
CAediting_468734	chr6_31751700_+	SINE	Alu	AluJr
CAediting_468735	chr6_31751726_+	SINE	Alu	AluJr
CAediting_468736	chr6_31751773_+	SINE	Alu	AluJr
CAediting_468737	chr6_31751821_+	SINE	Alu	AluSx
CAediting_468738	chr6_31751827_+	SINE	Alu	AluSx
CAediting_468739	chr6_31751830_+	SINE	Alu	AluSx
CAediting_468740	chr6_31751844_+	SINE	Alu	AluSx
CAediting_468741	chr6_31751857_+	SINE	Alu	AluSx
CAediting_468742	chr6_31751870_+	SINE	Alu	AluSx
CAediting_468743	chr6_31751884_+	SINE	Alu	AluSx
CAediting_468744	chr6_31751912_+	SINE	Alu	AluSx
CAediting_468745	chr6_31751913_+	SINE	Alu	AluSx
CAediting_468746	chr6_31751915_+	SINE	Alu	AluSx
CAediting_468747	chr6_31751921_+	SINE	Alu	AluSx
CAediting_468748	chr6_31751923_+	SINE	Alu	AluSx
CAediting_468749	chr6_31751928_+	SINE	Alu	AluSx
CAediting_468750	chr6_31751934_+	SINE	Alu	AluSx
CAediting_468751	chr6_31751937_+	SINE	Alu	AluSx
CAediting_468752	chr6_31751938_+	SINE	Alu	AluSx
CAediting_468753	chr6_31751939_+	SINE	Alu	AluSx
CAediting_468754	chr6_31751943_+	SINE	Alu	AluSx
CAediting_468755	chr6_31751946_+	SINE	Alu	AluSx
CAediting_468756	chr6_31751947_+	SINE	Alu	AluSx
CAediting_468757	chr6_31751952_+	SINE	Alu	AluSx
CAediting_468758	chr6_31751960_+	SINE	Alu	AluSx
CAediting_468759	chr6_31751978_+	SINE	Alu	AluSx
CAediting_468760	chr6_31752014_+	SINE	Alu	AluSx
CAediting_468761	chr6_31752018_+	SINE	Alu	AluSx
CAediting_468762	chr6_31752019_+	SINE	Alu	AluSx
CAediting_468763	chr6_31752064_+	SINE	Alu	AluSx
CAediting_468764	chr6_31752185_+	SINE	Alu	AluSg4
CAediting_468765	chr6_31752186_+	SINE	Alu	AluSg4
CAediting_468766	chr6_31752263_+	SINE	Alu	AluSg4
CAediting_468767	chr6_31752288_+	SINE	Alu	AluSg4
CAediting_468768	chr6_31752292_+	SINE	Alu	AluSg4
CAediting_468769	chr6_31752351_+	SINE	Alu	AluSg4
CAediting_468770	chr6_31752393_+	SINE	Alu	AluSg4
CAediting_468771	chr6_31752459_+	SINE	Alu	AluSc
CAediting_468772	chr6_31752510_+	SINE	Alu	AluSc
CAediting_468773	chr6_31752511_+	SINE	Alu	AluSc
CAediting_468774	chr6_31752513_+	SINE	Alu	AluSc
CAediting_468775	chr6_31752533_+	SINE	Alu	AluSc
CAediting_468776	chr6_31752544_+	SINE	Alu	AluSc
CAediting_468777	chr6_31752555_+	SINE	Alu	AluSc
CAediting_468778	chr6_31752558_+	SINE	Alu	AluSc
CAediting_468779	chr6_31752559_+	SINE	Alu	AluSc
CAediting_468780	chr6_31752560_+	SINE	Alu	AluSc
CAediting_468781	chr6_31752561_+	SINE	Alu	AluSc
CAediting_468782	chr6_31752562_+	SINE	Alu	AluSc
CAediting_468783	chr6_31752564_+	SINE	Alu	AluSc
CAediting_468784	chr6_31752567_+	SINE	Alu	AluSc
CAediting_468785	chr6_31752573_+	SINE	Alu	AluSc
CAediting_468786	chr6_31752593_+	SINE	Alu	AluSc
CAediting_468787	chr6_31752605_+	SINE	Alu	AluSc
CAediting_468788	chr6_31752630_+	SINE	Alu	AluSc
CAediting_468789	chr6_31752635_+	SINE	Alu	AluSc
CAediting_468790	chr6_31752640_+	SINE	Alu	AluSc
CAediting_468791	chr6_31752665_+	SINE	Alu	AluSc
CAediting_468792	chr6_31752702_+	SINE	Alu	AluSc
CAediting_468793	chr6_31752703_+	SINE	Alu	AluSc
CAediting_468794	chr6_31753750_+	SINE	Alu	AluSx1
CAediting_468795	chr6_31753809_+	SINE	Alu	AluSx1
CAediting_468796	chr6_31753868_+	SINE	Alu	AluSx1
CAediting_468797	chr6_31753881_+	SINE	Alu	AluSx1
CAediting_468798	chr6_31753906_+	SINE	Alu	AluSx1
CAediting_468799	chr6_31753915_+	SINE	Alu	AluSx1
CAediting_468800	chr6_31753926_+	SINE	Alu	AluSx1
CAediting_468801	chr6_31753969_+	SINE	Alu	AluSx1
CAediting_468802	chr6_31753978_+	SINE	Alu	AluSx1
CAediting_468803	chr6_31753987_+	SINE	Alu	AluSx1
CAediting_468804	chr6_31754000_+	SINE	Alu	AluSx1
CAediting_468805	chr6_31754214_+	SINE	Alu	AluSx1
CAediting_468806	chr6_31754229_+	SINE	Alu	AluSx1
CAediting_468807	chr6_31754230_+	SINE	Alu	AluSx1
CAediting_468808	chr6_31754243_+	SINE	Alu	AluSx1
CAediting_468809	chr6_31754249_+	SINE	Alu	AluSx1
CAediting_468810	chr6_31754250_+	SINE	Alu	AluSx1
CAediting_468811	chr6_31754289_+	SINE	Alu	AluSx1
CAediting_468812	chr6_31754333_+	SINE	Alu	AluSx1
CAediting_468813	chr6_31754347_+	SINE	Alu	AluSx1
CAediting_468814	chr6_31754385_+	SINE	Alu	AluSx1
CAediting_468815	chr6_31754418_+	SINE	Alu	AluSx1
CAediting_468816	chr6_31754531_+	SINE	Alu	FRAM
CAediting_468817	chr6_31754532_+	SINE	Alu	FRAM
CAediting_468818	chr6_31754536_+	SINE	Alu	FRAM
CAediting_468819	chr6_31754560_+	SINE	Alu	FRAM
CAediting_468820	chr6_31754615_+	SINE	Alu	FRAM
CAediting_468821	chr6_31754654_+	SINE	Alu	FRAM
CAediting_468822	chr6_31754851_+	SINE	Alu	AluSc5
CAediting_468823	chr6_31754852_+	SINE	Alu	AluSc5
CAediting_468824	chr6_31754881_+	SINE	Alu	AluSc5
CAediting_468825	chr6_31754937_+	SINE	Alu	AluSc5
CAediting_468826	chr6_31754943_+	SINE	Alu	AluSc5
CAediting_468827	chr6_31755026_+	SINE	Alu	AluSc5
CAediting_468828	chr6_31755175_+	SINE	Alu	AluJo
CAediting_468829	chr6_31755183_+	SINE	Alu	AluJo
CAediting_468830	chr6_31755191_+	SINE	Alu	AluJo
CAediting_468831	chr6_31755251_+	SINE	Alu	AluJo
CAediting_468832	chr6_31755252_+	SINE	Alu	AluJo
CAediting_468833	chr6_31755269_+	SINE	Alu	AluJo
CAediting_468834	chr6_31755462_+	SINE	Alu	AluSp
CAediting_468835	chr6_31755463_+	SINE	Alu	AluSp
CAediting_468836	chr6_31755545_+	SINE	Alu	AluSp
CAediting_468837	chr6_31755598_+	SINE	Alu	AluSp
CAediting_468838	chr6_31755622_+	SINE	Alu	AluSp
CAediting_468839	chr6_31755624_+	SINE	Alu	AluSp
CAediting_468840	chr6_31755636_+	SINE	Alu	AluSp
CAediting_468841	chr6_31755696_+	SINE	Alu	AluJo
CAediting_468842	chr6_31755706_+	SINE	Alu	AluJo
CAediting_468843	chr6_31755716_+	SINE	Alu	AluJo
CAediting_468844	chr6_31755717_+	SINE	Alu	AluJo
CAediting_468845	chr6_31755718_+	SINE	Alu	AluJo
CAediting_468846	chr6_31755731_+	SINE	Alu	AluJo
CAediting_468847	chr6_31755758_+	SINE	Alu	AluJo
CAediting_468848	chr6_31756221_+	SINE	Alu	AluSc
CAediting_468849	chr6_31756265_+	SINE	Alu	AluSc
CAediting_468850	chr6_31756270_+	SINE	Alu	AluSc
CAediting_468851	chr6_31756271_+	SINE	Alu	AluSc
CAediting_468852	chr6_31756288_+	SINE	Alu	AluSc
CAediting_468853	chr6_31756311_+	SINE	Alu	AluSc
CAediting_468854	chr6_31756337_+	SINE	Alu	AluSc
CAediting_468855	chr6_31756346_+	SINE	Alu	AluSc
CAediting_468856	chr6_31756352_+	SINE	Alu	AluSc
CAediting_468857	chr6_31756355_+	SINE	Alu	AluSc
CAediting_468858	chr6_31756372_+	SINE	Alu	AluSc
CAediting_468859	chr6_31756406_+	SINE	Alu	AluSc
CAediting_468860	chr6_31756434_+	SINE	Alu	AluSc
CAediting_468861	chr6_31756448_+	SINE	Alu	AluSc
CAediting_468862	chr6_31756659_+	SINE	Alu	AluSc
CAediting_468863	chr6_31756699_+	SINE	Alu	AluSc
CAediting_468864	chr6_31756745_+	SINE	Alu	AluSc
CAediting_468865	chr6_31756758_+	SINE	Alu	AluSc
CAediting_468866	chr6_31756770_+	SINE	Alu	AluSc
CAediting_468867	chr6_31756838_+	SINE	Alu	AluSc
CAediting_468868	chr6_31756882_+	SINE	Alu	AluSc
CAediting_468869	chr6_31756899_+	SINE	Alu	AluSc
CAediting_468870	chr6_31756900_+	SINE	Alu	AluSc
CAediting_468871	chr6_31756901_+	SINE	Alu	AluSc
CAediting_468872	chr6_31756913_+	SINE	Alu	AluSc
CAediting_468873	chr6_31757164_+	SINE	Alu	AluY
CAediting_468874	chr6_31757257_+	SINE	Alu	AluY
CAediting_468875	chr6_31757284_+	SINE	Alu	AluY
CAediting_468876	chr6_31757310_+	SINE	Alu	AluY
CAediting_468877	chr6_31757335_+	SINE	Alu	AluY
CAediting_468878	chr6_31757343_+	SINE	Alu	AluY
CAediting_468879	chr6_31757351_+	SINE	Alu	AluY
CAediting_468880	chr6_31757406_+	SINE	Alu	AluY
CAediting_468881	chr6_31757418_+	SINE	Alu	AluY
CAediting_468882	chr6_31757698_+	SINE	Alu	AluSx
CAediting_468883	chr6_31757795_+	SINE	Alu	AluSx
CAediting_468884	chr6_31757922_+	SINE	Alu	AluSx
CAediting_468885	chr6_31757950_+	SINE	Alu	AluSx

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RNA A-to-I editing events in the alternative splicing sites for MSH5-SAPCD1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000255152.7.MSH5-SAPCD1.

Correlation between RNA A-to-I editing and PSI for ENSG00000255152.7.MSH5-SAPCD1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for MSH5-SAPCD1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for MSH5-SAPCD1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for MSH5-SAPCD1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000255152.7	ENST00000493662	hsa-miR-605-3p	31762581	31762587	7mer-m8	31762567	31762588	140	-16.52
CAediting_86358	chr1_109598906_+	ENSG00000255152.7	ENST00000493662	hsa-miR-197-5p	31763031	31763037	7mer-m8	31763016	31763038	145	-22.64
CAediting_442554	chr5_154685830_+	ENSG00000255152.7	ENST00000493662	hsa-miR-1303	31764840	31764847	8mer-1a	31764826	31764847	156	-16.48
CAediting_86358	chr1_109598906_+	ENSG00000255152.7	ENST00000498473	hsa-miR-197-5p	31763031	31763037	7mer-m8	31763016	31763038	145	-22.64
CAediting_442554	chr5_154685830_+	ENSG00000255152.7	ENST00000498473	hsa-miR-1303	31764840	31764847	8mer-1a	31764826	31764847	156	-16.48
CAediting_1054808	chr15_66496985_-	ENSG00000255152.7	ENST00000476085	hsa-miR-4512	31764411	31764418	8mer-1a	31764397	31764418	152	-25.99
CAediting_442554	chr5_154685830_+	ENSG00000255152.7	ENST00000476085	hsa-miR-1303	31764840	31764847	8mer-1a	31764826	31764847	156	-16.48
CAediting_468389	chr6_31355314_-	ENSG00000255152.7	ENST00000493662	hsa-miR-6891-5p	31764533	31764539	7mer-m8	31764519	31764540	148	-26.48
CAediting_1524209	chrX_134546392_-	ENSG00000255152.7	ENST00000498473	hsa-miR-503-5p	31762503	31762508	6mer	31762493	31762516	150	-27.94
CAediting_1524209	chrX_134546392_-	ENSG00000255152.7	ENST00000498473	hsa-miR-503-5p	31762510	31762516	7mer-1a	31762493	31762516	150	-27.94
CAediting_468389	chr6_31355314_-	ENSG00000255152.7	ENST00000498473	hsa-miR-6891-5p	31764533	31764539	7mer-m8	31764519	31764540	148	-26.48
CAediting_468389	chr6_31355314_-	ENSG00000255152.7	ENST00000476085	hsa-miR-6891-5p	31764426	31764431	6mer	31764412	31764432	140	-25.74
CAediting_468389	chr6_31355314_-	ENSG00000255152.7	ENST00000476085	hsa-miR-6891-5p	31764533	31764539	7mer-m8	31764519	31764540	148	-26.48

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_86358	chr1_109598906_+	ENSG00000255152.7	ENST00000493662	hsa-miR-197-5p	31762803	31762809	7mer-m8	31762787	31762810	148	-22.51
CAediting_86358	chr1_109598906_+	ENSG00000255152.7	ENST00000498473	hsa-miR-197-5p	31762803	31762809	7mer-m8	31762789	31762810	148	-22.51
CAediting_1054808	chr15_66496985_-	ENSG00000255152.7	ENST00000476085	hsa-miR-4512	31764512	31764519	8mer-1a	31764498	31764519	145	-22.4

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for MSH5-SAPCD1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for MSH5-SAPCD1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
STAD	CAediting_468699	chr6_31751036_+	.	.	0.026942399058647	0.26637014329642	.	.

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Relation with cancer stages for MSH5-SAPCD1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for MSH5-SAPCD1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for MSH5-SAPCD1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for MSH5-SAPCD1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene