Home

Download

Statistics

Examples

Help

Contact

Editing gene: RAB11B-AS1 (CAeditome ID:100507567)

Gene summary for RAB11B-AS1

Gene summary

Gene information	Gene symbol	RAB11B-AS1
	Gene ID	100507567
	Gene name	RAB11B antisense RNA 1
	Synonyms	MIR4999HG
	Cytomap	19p13.2
	Type of gene	ncRNA
	Description	MIR4999 hostRAB11B antisense RNA 1 (non-protein coding)
	Modification date	20210518
	UniProtAcc	.
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

Top

RNA A-to-I events for RAB11B-AS1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000269386.4

RNA A-to-I editing events in Cancer.

CAediting_1286385(8374512, -), CAediting_1286386(8374516, -), CAediting_1286387(8374518, -), CAediting_1286388(8374531, -), CAediting_1286389(8374534, -), CAediting_1286390(8374557, -), CAediting_1286391(8374558, -), CAediting_1286392(8374563, -), CAediting_1286393(8374570, -), CAediting_1286394(8374592, -), CAediting_1286395(8374595, -), CAediting_1286396(8374608, -), CAediting_1286397(8374610, -), CAediting_1286398(8374629, -), CAediting_1286399(8374651, -), CAediting_1286400(8374653, -), CAediting_1286401(8374665, -), CAediting_1286402(8374677, -), CAediting_1286403(8374694, -), CAediting_1286404(8374695, -), CAediting_1286405(8374732, -), CAediting_1286406(8374774, -), CAediting_1286407(8374776, -), CAediting_1286408(8374870, -), CAediting_1286409(8374871, -), CAediting_1286410(8374875, -), CAediting_1286411(8374876, -), CAediting_1286412(8374892, -), CAediting_1286413(8374899, -), CAediting_1286414(8375127, -), CAediting_1286415(8375302, -), CAediting_1286416(8375311, -), CAediting_1286417(8375450, -), CAediting_1286418(8375453, -), CAediting_1286419(8375462, -), CAediting_1286420(8375495, -), CAediting_1286421(8375507, -), CAediting_1286422(8375510, -), CAediting_1286423(8375519, -), CAediting_1286424(8375532, -), CAediting_1286425(8375533, -), CAediting_1286426(8375536, -), CAediting_1286427(8377331, -), CAediting_1286428(8377332, -), CAediting_1286429(8377342, -), CAediting_1286430(8377348, -), CAediting_1286431(8377358, -), CAediting_1286432(8377361, -), CAediting_1286433(8377411, -), CAediting_1286434(8377456, -), CAediting_1286435(8378833, -), CAediting_1286436(8387409, -), CAediting_1286437(8387432, -), CAediting_1286438(8387461, -), CAediting_1286439(8387481, -), CAediting_1286440(8387527, -), CAediting_1286441(8387533, -), CAediting_1286442(8387549, -), CAediting_1286443(8387554, -), CAediting_1286444(8387562, -), CAediting_1286445(8387563, -), CAediting_1286446(8387566, -), CAediting_1286447(8387592, -), CAediting_1286448(8387597, -), CAediting_1286449(8387627, -), CAediting_1286450(8387752, -), CAediting_1286451(8387792, -), CAediting_1286452(8387795, -), CAediting_1286453(8387801, -), CAediting_1286454(8387822, -), CAediting_1286455(8387827, -), CAediting_1286456(8387828, -), CAediting_1286457(8387928, -), CAediting_1286458(8387938, -), CAediting_1286459(8387943, -), CAediting_1286460(8387967, -), CAediting_1286461(8387972, -), CAediting_1286462(8387973, -), CAediting_1286463(8388431, -), CAediting_1286464(8388432, -), CAediting_1286465(8388447, -), CAediting_1286466(8388448, -), CAediting_1286467(8388453, -), CAediting_1286468(8388455, -), CAediting_1286469(8388486, -), CAediting_1286470(8388490, -), CAediting_1286471(8388494, -), CAediting_1286472(8388505, -), CAediting_1286473(8388506, -), CAediting_1286474(8388515, -), CAediting_1286475(8388520, -), CAediting_1286476(8388533, -), CAediting_1286477(8388534, -), CAediting_1286478(8388550, -), CAediting_1286479(8388563, -), CAediting_1286480(8388581, -), CAediting_1286481(8388584, -), CAediting_1286482(8388669, -), CAediting_1286483(8388670, -), CAediting_1286484(8388671, -), CAediting_1286485(8388684, -), CAediting_1286486(8388703, -), CAediting_1286487(8388708, -), CAediting_1286488(8388713, -), CAediting_1286489(8388719, -), CAediting_1286490(8388726, -), CAediting_1286491(8388884, -), CAediting_1286492(8388995, -), CAediting_1286493(8389020, -), CAediting_1286494(8389114, -), CAediting_1286495(8389132, -), CAediting_1286496(8389573, -), CAediting_1286497(8389588, -), CAediting_1286498(8389598, -), CAediting_1286499(8389601, -), CAediting_1286500(8389605, -), CAediting_1286501(8389613, -), CAediting_1286502(8389614, -), CAediting_1286503(8389641, -), CAediting_1286504(8389670, -), CAediting_1286505(8389678, -), CAediting_1286506(8389680, -), CAediting_1286507(8389681, -), CAediting_1286508(8389690, -), CAediting_1286509(8389704, -), CAediting_1286510(8389725, -), CAediting_1286511(8389747, -), CAediting_1286512(8389748, -),

Top

RNA editing positional annotations for RAB11B-AS1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1286385	chr19_8374512_-	ncRNA_exonic
CAediting_1286386	chr19_8374516_-	ncRNA_exonic
CAediting_1286387	chr19_8374518_-	ncRNA_exonic
CAediting_1286388	chr19_8374531_-	ncRNA_exonic
CAediting_1286389	chr19_8374534_-	ncRNA_exonic
CAediting_1286390	chr19_8374557_-	ncRNA_exonic
CAediting_1286391	chr19_8374558_-	ncRNA_exonic
CAediting_1286392	chr19_8374563_-	ncRNA_exonic
CAediting_1286393	chr19_8374570_-	ncRNA_exonic
CAediting_1286394	chr19_8374592_-	ncRNA_exonic
CAediting_1286395	chr19_8374595_-	ncRNA_exonic
CAediting_1286396	chr19_8374608_-	ncRNA_exonic
CAediting_1286397	chr19_8374610_-	ncRNA_splicing
CAediting_1286398	chr19_8374629_-	ncRNA_intronic
CAediting_1286399	chr19_8374651_-	ncRNA_intronic
CAediting_1286400	chr19_8374653_-	ncRNA_intronic
CAediting_1286401	chr19_8374665_-	ncRNA_intronic
CAediting_1286402	chr19_8374677_-	ncRNA_intronic
CAediting_1286403	chr19_8374694_-	ncRNA_intronic
CAediting_1286404	chr19_8374695_-	ncRNA_intronic
CAediting_1286405	chr19_8374732_-	ncRNA_intronic
CAediting_1286406	chr19_8374774_-	ncRNA_intronic
CAediting_1286407	chr19_8374776_-	ncRNA_intronic
CAediting_1286408	chr19_8374870_-	ncRNA_intronic
CAediting_1286409	chr19_8374871_-	ncRNA_intronic
CAediting_1286410	chr19_8374875_-	ncRNA_intronic
CAediting_1286411	chr19_8374876_-	ncRNA_intronic
CAediting_1286412	chr19_8374892_-	ncRNA_intronic
CAediting_1286413	chr19_8374899_-	ncRNA_intronic
CAediting_1286414	chr19_8375127_-	ncRNA_intronic
CAediting_1286415	chr19_8375302_-	ncRNA_intronic
CAediting_1286416	chr19_8375311_-	ncRNA_intronic
CAediting_1286417	chr19_8375450_-	ncRNA_intronic
CAediting_1286418	chr19_8375453_-	ncRNA_intronic
CAediting_1286419	chr19_8375462_-	ncRNA_intronic
CAediting_1286420	chr19_8375495_-	ncRNA_intronic
CAediting_1286421	chr19_8375507_-	ncRNA_intronic
CAediting_1286422	chr19_8375510_-	ncRNA_intronic
CAediting_1286423	chr19_8375519_-	ncRNA_intronic
CAediting_1286424	chr19_8375532_-	ncRNA_intronic
CAediting_1286425	chr19_8375533_-	ncRNA_intronic
CAediting_1286426	chr19_8375536_-	ncRNA_intronic
CAediting_1286427	chr19_8377331_-	ncRNA_intronic
CAediting_1286428	chr19_8377332_-	ncRNA_intronic
CAediting_1286429	chr19_8377342_-	ncRNA_intronic
CAediting_1286430	chr19_8377348_-	ncRNA_intronic
CAediting_1286431	chr19_8377358_-	ncRNA_intronic
CAediting_1286432	chr19_8377361_-	ncRNA_intronic
CAediting_1286433	chr19_8377411_-	ncRNA_intronic
CAediting_1286434	chr19_8377456_-	ncRNA_intronic
CAediting_1286435	chr19_8378833_-	ncRNA_intronic
CAediting_1286436	chr19_8387409_-	ncRNA_intronic
CAediting_1286437	chr19_8387432_-	ncRNA_intronic
CAediting_1286438	chr19_8387461_-	ncRNA_intronic
CAediting_1286439	chr19_8387481_-	ncRNA_intronic
CAediting_1286440	chr19_8387527_-	ncRNA_intronic
CAediting_1286441	chr19_8387533_-	ncRNA_intronic
CAediting_1286442	chr19_8387549_-	ncRNA_intronic
CAediting_1286443	chr19_8387554_-	ncRNA_intronic
CAediting_1286444	chr19_8387562_-	ncRNA_intronic
CAediting_1286445	chr19_8387563_-	ncRNA_intronic
CAediting_1286446	chr19_8387566_-	ncRNA_intronic
CAediting_1286447	chr19_8387592_-	ncRNA_intronic
CAediting_1286448	chr19_8387597_-	ncRNA_intronic
CAediting_1286449	chr19_8387627_-	ncRNA_intronic
CAediting_1286450	chr19_8387752_-	ncRNA_intronic
CAediting_1286451	chr19_8387792_-	ncRNA_intronic
CAediting_1286452	chr19_8387795_-	ncRNA_intronic
CAediting_1286453	chr19_8387801_-	ncRNA_intronic
CAediting_1286454	chr19_8387822_-	ncRNA_intronic
CAediting_1286455	chr19_8387827_-	ncRNA_intronic
CAediting_1286456	chr19_8387828_-	ncRNA_intronic
CAediting_1286457	chr19_8387928_-	ncRNA_intronic
CAediting_1286458	chr19_8387938_-	ncRNA_intronic
CAediting_1286459	chr19_8387943_-	ncRNA_intronic
CAediting_1286460	chr19_8387967_-	ncRNA_intronic
CAediting_1286461	chr19_8387972_-	ncRNA_intronic
CAediting_1286462	chr19_8387973_-	ncRNA_intronic
CAediting_1286463	chr19_8388431_-	ncRNA_intronic
CAediting_1286464	chr19_8388432_-	ncRNA_intronic
CAediting_1286465	chr19_8388447_-	ncRNA_intronic
CAediting_1286466	chr19_8388448_-	ncRNA_intronic
CAediting_1286467	chr19_8388453_-	ncRNA_intronic
CAediting_1286468	chr19_8388455_-	ncRNA_intronic
CAediting_1286469	chr19_8388486_-	ncRNA_intronic
CAediting_1286470	chr19_8388490_-	ncRNA_intronic
CAediting_1286471	chr19_8388494_-	ncRNA_intronic
CAediting_1286472	chr19_8388505_-	ncRNA_intronic
CAediting_1286473	chr19_8388506_-	ncRNA_intronic
CAediting_1286474	chr19_8388515_-	ncRNA_intronic
CAediting_1286475	chr19_8388520_-	ncRNA_intronic
CAediting_1286476	chr19_8388533_-	ncRNA_intronic
CAediting_1286477	chr19_8388534_-	ncRNA_intronic
CAediting_1286478	chr19_8388550_-	ncRNA_intronic
CAediting_1286479	chr19_8388563_-	ncRNA_intronic
CAediting_1286480	chr19_8388581_-	ncRNA_intronic
CAediting_1286481	chr19_8388584_-	ncRNA_intronic
CAediting_1286482	chr19_8388669_-	ncRNA_intronic
CAediting_1286483	chr19_8388670_-	ncRNA_intronic
CAediting_1286484	chr19_8388671_-	ncRNA_intronic
CAediting_1286485	chr19_8388684_-	ncRNA_intronic
CAediting_1286486	chr19_8388703_-	ncRNA_intronic
CAediting_1286487	chr19_8388708_-	ncRNA_intronic
CAediting_1286488	chr19_8388713_-	ncRNA_intronic
CAediting_1286489	chr19_8388719_-	ncRNA_intronic
CAediting_1286490	chr19_8388726_-	ncRNA_intronic
CAediting_1286491	chr19_8388884_-	ncRNA_intronic
CAediting_1286492	chr19_8388995_-	ncRNA_intronic
CAediting_1286493	chr19_8389020_-	ncRNA_intronic
CAediting_1286494	chr19_8389114_-	ncRNA_intronic
CAediting_1286495	chr19_8389132_-	ncRNA_intronic
CAediting_1286496	chr19_8389573_-	ncRNA_intronic
CAediting_1286497	chr19_8389588_-	ncRNA_intronic
CAediting_1286498	chr19_8389598_-	ncRNA_intronic
CAediting_1286499	chr19_8389601_-	ncRNA_intronic
CAediting_1286500	chr19_8389605_-	ncRNA_intronic
CAediting_1286501	chr19_8389613_-	ncRNA_intronic
CAediting_1286502	chr19_8389614_-	ncRNA_intronic
CAediting_1286503	chr19_8389641_-	ncRNA_intronic
CAediting_1286504	chr19_8389670_-	ncRNA_intronic
CAediting_1286505	chr19_8389678_-	ncRNA_intronic
CAediting_1286506	chr19_8389680_-	ncRNA_intronic
CAediting_1286507	chr19_8389681_-	ncRNA_intronic
CAediting_1286508	chr19_8389690_-	ncRNA_intronic
CAediting_1286509	chr19_8389704_-	ncRNA_intronic
CAediting_1286510	chr19_8389725_-	ncRNA_intronic
CAediting_1286511	chr19_8389747_-	ncRNA_intronic
CAediting_1286512	chr19_8389748_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1286385	chr19_8374512_-	SINE	Alu	AluSz
CAediting_1286386	chr19_8374516_-	SINE	Alu	AluSz
CAediting_1286387	chr19_8374518_-	SINE	Alu	AluSz
CAediting_1286388	chr19_8374531_-	SINE	Alu	AluSz
CAediting_1286389	chr19_8374534_-	SINE	Alu	AluSz
CAediting_1286390	chr19_8374557_-	SINE	Alu	AluSz
CAediting_1286391	chr19_8374558_-	SINE	Alu	AluSz
CAediting_1286392	chr19_8374563_-	SINE	Alu	AluSz
CAediting_1286393	chr19_8374570_-	SINE	Alu	AluSz
CAediting_1286394	chr19_8374592_-	SINE	Alu	AluSz
CAediting_1286395	chr19_8374595_-	SINE	Alu	AluSz
CAediting_1286396	chr19_8374608_-	SINE	Alu	AluSz
CAediting_1286397	chr19_8374610_-	SINE	Alu	AluSz
CAediting_1286398	chr19_8374629_-	SINE	Alu	AluSz
CAediting_1286399	chr19_8374651_-	SINE	Alu	AluSz
CAediting_1286400	chr19_8374653_-	SINE	Alu	AluSz
CAediting_1286401	chr19_8374665_-	SINE	Alu	AluSz
CAediting_1286402	chr19_8374677_-	SINE	Alu	AluSz
CAediting_1286403	chr19_8374694_-	SINE	Alu	AluSz
CAediting_1286404	chr19_8374695_-	SINE	Alu	AluSz
CAediting_1286405	chr19_8374732_-	SINE	Alu	AluSz
CAediting_1286406	chr19_8374774_-	SINE	Alu	AluSz
CAediting_1286407	chr19_8374776_-	SINE	Alu	AluSz
CAediting_1286408	chr19_8374870_-	SINE	Alu	FLAM_C
CAediting_1286409	chr19_8374871_-	SINE	Alu	FLAM_C
CAediting_1286410	chr19_8374875_-	SINE	Alu	FLAM_C
CAediting_1286411	chr19_8374876_-	SINE	Alu	FLAM_C
CAediting_1286412	chr19_8374892_-	SINE	Alu	FLAM_C
CAediting_1286413	chr19_8374899_-	SINE	Alu	FLAM_C
CAediting_1286414	chr19_8375127_-	SINE	Alu	AluSx1
CAediting_1286415	chr19_8375302_-	SINE	Alu	AluSx
CAediting_1286416	chr19_8375311_-	SINE	Alu	AluSx
CAediting_1286417	chr19_8375450_-	SINE	Alu	AluSx
CAediting_1286418	chr19_8375453_-	SINE	Alu	AluSx
CAediting_1286419	chr19_8375462_-	SINE	Alu	AluSx
CAediting_1286420	chr19_8375495_-	SINE	Alu	AluSx
CAediting_1286421	chr19_8375507_-	SINE	Alu	AluSx
CAediting_1286422	chr19_8375510_-	SINE	Alu	AluSx
CAediting_1286423	chr19_8375519_-	SINE	Alu	AluSx
CAediting_1286424	chr19_8375532_-	SINE	Alu	AluSx
CAediting_1286425	chr19_8375533_-	SINE	Alu	AluSx
CAediting_1286426	chr19_8375536_-	SINE	Alu	AluSx
CAediting_1286427	chr19_8377331_-	SINE	Alu	AluSx1
CAediting_1286428	chr19_8377332_-	SINE	Alu	AluSx1
CAediting_1286429	chr19_8377342_-	SINE	Alu	AluSx1
CAediting_1286430	chr19_8377348_-	SINE	Alu	AluSx1
CAediting_1286431	chr19_8377358_-	SINE	Alu	AluSx1
CAediting_1286432	chr19_8377361_-	SINE	Alu	AluSx1
CAediting_1286433	chr19_8377411_-	SINE	Alu	AluSx1
CAediting_1286434	chr19_8377456_-	SINE	Alu	AluSx1
CAediting_1286435	chr19_8378833_-	SINE	Alu	AluSg7
CAediting_1286436	chr19_8387409_-	SINE	Alu	AluJr
CAediting_1286437	chr19_8387432_-	SINE	Alu	AluJr
CAediting_1286438	chr19_8387461_-	SINE	Alu	AluJr
CAediting_1286439	chr19_8387481_-	SINE	Alu	AluJr
CAediting_1286440	chr19_8387527_-	SINE	Alu	AluJr
CAediting_1286441	chr19_8387533_-	SINE	Alu	AluJr
CAediting_1286442	chr19_8387549_-	SINE	Alu	AluJr
CAediting_1286443	chr19_8387554_-	SINE	Alu	AluJr
CAediting_1286444	chr19_8387562_-	SINE	Alu	AluJr
CAediting_1286445	chr19_8387563_-	SINE	Alu	AluJr
CAediting_1286446	chr19_8387566_-	SINE	Alu	AluJr
CAediting_1286447	chr19_8387592_-	SINE	Alu	AluJr
CAediting_1286448	chr19_8387597_-	SINE	Alu	AluJr
CAediting_1286449	chr19_8387627_-	SINE	Alu	AluJr
CAediting_1286450	chr19_8387752_-	SINE	Alu	AluSq2
CAediting_1286451	chr19_8387792_-	SINE	Alu	AluSq2
CAediting_1286452	chr19_8387795_-	SINE	Alu	AluSq2
CAediting_1286453	chr19_8387801_-	SINE	Alu	AluSq2
CAediting_1286454	chr19_8387822_-	SINE	Alu	AluSq2
CAediting_1286455	chr19_8387827_-	SINE	Alu	AluSq2
CAediting_1286456	chr19_8387828_-	SINE	Alu	AluSq2
CAediting_1286457	chr19_8387928_-	SINE	Alu	AluSq2
CAediting_1286458	chr19_8387938_-	SINE	Alu	AluSq2
CAediting_1286459	chr19_8387943_-	SINE	Alu	AluSq2
CAediting_1286460	chr19_8387967_-	SINE	Alu	AluSq2
CAediting_1286461	chr19_8387972_-	SINE	Alu	AluSq2
CAediting_1286462	chr19_8387973_-	SINE	Alu	AluSq2
CAediting_1286463	chr19_8388431_-	SINE	Alu	AluJb
CAediting_1286464	chr19_8388432_-	SINE	Alu	AluJb
CAediting_1286465	chr19_8388447_-	SINE	Alu	AluJb
CAediting_1286466	chr19_8388448_-	SINE	Alu	AluJb
CAediting_1286467	chr19_8388453_-	SINE	Alu	AluJb
CAediting_1286468	chr19_8388455_-	SINE	Alu	AluJb
CAediting_1286469	chr19_8388486_-	SINE	Alu	AluJb
CAediting_1286470	chr19_8388490_-	SINE	Alu	AluJb
CAediting_1286471	chr19_8388494_-	SINE	Alu	AluJb
CAediting_1286472	chr19_8388505_-	SINE	Alu	AluJb
CAediting_1286473	chr19_8388506_-	SINE	Alu	AluJb
CAediting_1286474	chr19_8388515_-	SINE	Alu	AluJb
CAediting_1286475	chr19_8388520_-	SINE	Alu	AluJb
CAediting_1286476	chr19_8388533_-	SINE	Alu	AluJb
CAediting_1286477	chr19_8388534_-	SINE	Alu	AluJb
CAediting_1286478	chr19_8388550_-	SINE	Alu	AluJb
CAediting_1286479	chr19_8388563_-	SINE	Alu	AluJb
CAediting_1286480	chr19_8388581_-	SINE	Alu	AluJb
CAediting_1286481	chr19_8388584_-	SINE	Alu	AluJb
CAediting_1286482	chr19_8388669_-	SINE	Alu	AluJb
CAediting_1286483	chr19_8388670_-	SINE	Alu	AluJb
CAediting_1286484	chr19_8388671_-	SINE	Alu	AluJb
CAediting_1286485	chr19_8388684_-	SINE	Alu	AluJb
CAediting_1286486	chr19_8388703_-	SINE	Alu	AluJb
CAediting_1286487	chr19_8388708_-	SINE	Alu	AluJb
CAediting_1286488	chr19_8388713_-	SINE	Alu	AluJb
CAediting_1286489	chr19_8388719_-	SINE	Alu	AluJb
CAediting_1286490	chr19_8388726_-	SINE	Alu	AluJb
CAediting_1286491	chr19_8388884_-	LINE	L1	L1MA9
CAediting_1286492	chr19_8388995_-	SINE	Alu	AluSp
CAediting_1286493	chr19_8389020_-	SINE	Alu	AluSp
CAediting_1286494	chr19_8389114_-	SINE	Alu	AluSp
CAediting_1286495	chr19_8389132_-	SINE	Alu	AluSp
CAediting_1286496	chr19_8389573_-	SINE	Alu	AluSg
CAediting_1286497	chr19_8389588_-	SINE	Alu	AluSg
CAediting_1286498	chr19_8389598_-	SINE	Alu	AluSg
CAediting_1286499	chr19_8389601_-	SINE	Alu	AluSg
CAediting_1286500	chr19_8389605_-	SINE	Alu	AluSg
CAediting_1286501	chr19_8389613_-	SINE	Alu	AluSg
CAediting_1286502	chr19_8389614_-	SINE	Alu	AluSg
CAediting_1286503	chr19_8389641_-	SINE	Alu	AluSg
CAediting_1286504	chr19_8389670_-	SINE	Alu	AluSg
CAediting_1286505	chr19_8389678_-	SINE	Alu	AluSg
CAediting_1286506	chr19_8389680_-	SINE	Alu	AluSg
CAediting_1286507	chr19_8389681_-	SINE	Alu	AluSg
CAediting_1286508	chr19_8389690_-	SINE	Alu	AluSg
CAediting_1286509	chr19_8389704_-	SINE	Alu	AluSg
CAediting_1286510	chr19_8389725_-	SINE	Alu	AluSg
CAediting_1286511	chr19_8389747_-	SINE	Alu	AluSg
CAediting_1286512	chr19_8389748_-	SINE	Alu	AluSg

Top

RNA A-to-I editing events in the alternative splicing sites for RAB11B-AS1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000269386.4.RAB11B-AS1.

Correlation between RNA A-to-I editing and PSI for ENSG00000269386.4.RAB11B-AS1.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for RAB11B-AS1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for RAB11B-AS1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for RAB11B-AS1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1286390	chr19_8374557_-	ENSG00000269386.4	ENST00000593581.4	hsa-miR-3622a-3p	8374553	8374560	8mer-1a	8374553	8374574	144	-14.88
CAediting_1286390	chr19_8374557_-	ENSG00000269386.4	ENST00000593581.4	hsa-miR-3622b-3p	8374553	8374560	8mer-1a	8374553	8374575	153	-18.7
CAediting_1286390	chr19_8374557_-	ENSG00000269386.4	ENST00000593581.4	hsa-miR-544b	8374556	8374562	7mer-m8	8374555	8374575	165	-21.37
CAediting_1286390	chr19_8374557_-	ENSG00000269386.4	ENST00000593581.4	hsa-miR-7162-3p	8374557	8374563	7mer-m8	8374556	8374573	145	-23.52
CAediting_1286390	chr19_8374557_-	ENSG00000269386.4	ENST00000597407.1	hsa-miR-3622a-3p	8374553	8374560	8mer-1a	8374553	8374574	144	-14.88
CAediting_1286390	chr19_8374557_-	ENSG00000269386.4	ENST00000597407.1	hsa-miR-3622b-3p	8374553	8374560	8mer-1a	8374553	8374575	153	-18.7
CAediting_1286390	chr19_8374557_-	ENSG00000269386.4	ENST00000597407.1	hsa-miR-544b	8374556	8374562	7mer-m8	8374555	8374575	165	-21.37
CAediting_1286390	chr19_8374557_-	ENSG00000269386.4	ENST00000597407.1	hsa-miR-7162-3p	8374557	8374563	7mer-m8	8374556	8374573	145	-23.52
CAediting_1286390	chr19_8374557_-	ENSG00000269386.4	ENST00000597785.1	hsa-miR-3622a-3p	8374553	8374560	8mer-1a	8374553	8374574	144	-14.88
CAediting_1286390	chr19_8374557_-	ENSG00000269386.4	ENST00000597785.1	hsa-miR-3622b-3p	8374553	8374560	8mer-1a	8374553	8374575	153	-18.7
CAediting_1286390	chr19_8374557_-	ENSG00000269386.4	ENST00000597785.1	hsa-miR-544b	8374556	8374562	7mer-m8	8374555	8374575	165	-21.37
CAediting_1286390	chr19_8374557_-	ENSG00000269386.4	ENST00000597785.1	hsa-miR-7162-3p	8374557	8374563	7mer-m8	8374556	8374573	145	-23.52
CAediting_1286393	chr19_8374570_-	ENSG00000269386.4	ENST00000593581.4	hsa-miR-4660	8374566	8374572	7mer-m8	8374565	8374587	143	-19.15
CAediting_1286393	chr19_8374570_-	ENSG00000269386.4	ENST00000593581.4	hsa-miR-646	8374565	8374571	7mer-m8	8374564	8374582	140	-17.53
CAediting_1286393	chr19_8374570_-	ENSG00000269386.4	ENST00000597407.1	hsa-miR-4660	8374566	8374572	7mer-m8	8374565	8374587	143	-19.15
CAediting_1286393	chr19_8374570_-	ENSG00000269386.4	ENST00000597407.1	hsa-miR-646	8374565	8374571	7mer-m8	8374564	8374582	140	-17.53
CAediting_1286393	chr19_8374570_-	ENSG00000269386.4	ENST00000597785.1	hsa-miR-4660	8374566	8374572	7mer-m8	8374565	8374587	143	-19.15
CAediting_1286393	chr19_8374570_-	ENSG00000269386.4	ENST00000597785.1	hsa-miR-646	8374565	8374571	7mer-m8	8374564	8374582	140	-17.53
CAediting_1286388	chr19_8374531_-	ENSG00000269386.4	ENST00000593581.4	hsa-miR-4677-3p	8374530	8374537	8mer-1a	8374530	8374550	150	-17.86
CAediting_1286388	chr19_8374531_-	ENSG00000269386.4	ENST00000597407.1	hsa-miR-4677-3p	8374530	8374537	8mer-1a	8374530	8374550	150	-17.86
CAediting_1286388	chr19_8374531_-	ENSG00000269386.4	ENST00000597785.1	hsa-miR-4677-3p	8374530	8374537	8mer-1a	8374530	8374550	150	-17.86
CAediting_1286392	chr19_8374563_-	ENSG00000269386.4	ENST00000593581.4	hsa-miR-4530	8374563	8374569	7mer-m8	8374562	8374579	155	-24.13
CAediting_1286392	chr19_8374563_-	ENSG00000269386.4	ENST00000597407.1	hsa-miR-4530	8374563	8374569	7mer-m8	8374562	8374579	155	-24.13
CAediting_1286392	chr19_8374563_-	ENSG00000269386.4	ENST00000597785.1	hsa-miR-4530	8374563	8374569	7mer-m8	8374562	8374579	155	-24.13
CAediting_1286396	chr19_8374608_-	ENSG00000269386.4	ENST00000597785.1	hsa-miR-345-3p	8374606	8376909	8mer-1a	8374606	8376925	150	-21.85
CAediting_1286396	chr19_8374608_-	ENSG00000269386.4	ENST00000597785.1	hsa-miR-670-5p	8374606	8376908	7mer-m8	8374605	8376920	150	-17.42
CAediting_1286385	chr19_8374512_-	ENSG00000269386.4	ENST00000593581.4	hsa-miR-6720-3p	8374511	8374517	7mer-m8	8374510	8374531	144	-24.07
CAediting_1286385	chr19_8374512_-	ENSG00000269386.4	ENST00000597407.1	hsa-miR-6720-3p	8374511	8374517	7mer-m8	8374510	8374531	144	-24.07
CAediting_1286385	chr19_8374512_-	ENSG00000269386.4	ENST00000597785.1	hsa-miR-6720-3p	8374511	8374517	7mer-m8	8374510	8374531	144	-24.07
CAediting_1286389	chr19_8374534_-	ENSG00000269386.4	ENST00000593581.4	hsa-miR-450a-5p	8374530	8374536	7mer-m8	8374529	8374550	143	-9.42
CAediting_1286389	chr19_8374534_-	ENSG00000269386.4	ENST00000593581.4	hsa-miR-4737	8374531	8374538	8mer-1a	8374531	8374549	156	-22.9
CAediting_1286389	chr19_8374534_-	ENSG00000269386.4	ENST00000597407.1	hsa-miR-450a-5p	8374530	8374536	7mer-m8	8374529	8374550	143	-9.42
CAediting_1286389	chr19_8374534_-	ENSG00000269386.4	ENST00000597407.1	hsa-miR-4737	8374531	8374538	8mer-1a	8374531	8374549	156	-22.9
CAediting_1286389	chr19_8374534_-	ENSG00000269386.4	ENST00000597785.1	hsa-miR-450a-5p	8374530	8374536	7mer-m8	8374529	8374550	143	-9.42
CAediting_1286389	chr19_8374534_-	ENSG00000269386.4	ENST00000597785.1	hsa-miR-4737	8374531	8374538	8mer-1a	8374531	8374549	156	-22.9
CAediting_1286395	chr19_8374595_-	ENSG00000269386.4	ENST00000593581.4	hsa-miR-4730	8374592	8374598	7mer-m8	8374591	8376966	161	-26.73
CAediting_1286395	chr19_8374595_-	ENSG00000269386.4	ENST00000597407.1	hsa-miR-4730	8374592	8374598	7mer-m8	8374591	8376966	161	-26.73
CAediting_1286395	chr19_8374595_-	ENSG00000269386.4	ENST00000597785.1	hsa-miR-4730	8374592	8374598	7mer-m8	8374591	8376910	159	-26.94

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1286389	chr19_8374534_-	ENSG00000269386.4	ENST00000593581.4	hsa-miR-6765-5p	8374534	8374539	6mer	8374533	8374557	149	-33.63
CAediting_1286396	chr19_8374608_-	ENSG00000269386.4	ENST00000597785.1	hsa-miR-146a-3p	8374606	8376909	8mer-1a	8374606	8376923	154	-14.19
CAediting_1286396	chr19_8374608_-	ENSG00000269386.4	ENST00000597785.1	hsa-miR-3921	8374606	8376908	7mer-1a	8374606	8376924	141	-13.79
CAediting_1286396	chr19_8374608_-	ENSG00000269386.4	ENST00000597785.1	hsa-miR-4653-5p	8374606	8376908	7mer-1a	8374606	8376925	143	-19.38

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1368054	chr19_46709310_-	ENSG00000269386.4	ENST00000597407.1	hsa-miR-320e	8377802	8377808	7mer-m8	8377801	8377819	153	-19.56
CAediting_396018	chr5_1062918_-	ENSG00000269386.4	ENST00000597407.1	hsa-miR-4635	8374556	8374562	7mer-m8	8374555	8374575	162	-23.77
CAediting_573000	chr7_92204081_-	ENSG00000269386.4	ENST00000597407.1	hsa-miR-1285-5p	8374605	8376964	7mer-m8	8374604	8376977	140	-16.66
CAediting_396018	chr5_1062918_-	ENSG00000269386.4	ENST00000593581.4	hsa-miR-4635	8374556	8374562	7mer-m8	8374555	8374575	162	-23.77
CAediting_580943	chr7_100356700_+	ENSG00000269386.4	ENST00000593581.4	hsa-miR-6840-3p	8390424	8390430	7mer-m8	8390423	8390446	149	-28.16
CAediting_524911	chr7_5495852_-	ENSG00000269386.4	ENST00000593581.4	hsa-miR-589-3p	8390250	8390257	8mer-1a	8390250	8390275	150	-20.51
CAediting_573000	chr7_92204081_-	ENSG00000269386.4	ENST00000593581.4	hsa-miR-1285-5p	8374605	8376964	7mer-m8	8374604	8376977	140	-16.66
CAediting_1368054	chr19_46709310_-	ENSG00000269386.4	ENST00000597785.1	hsa-miR-320e	8376946	8376952	7mer-m8	8376945	8376962	141	-15.37
CAediting_396018	chr5_1062918_-	ENSG00000269386.4	ENST00000597785.1	hsa-miR-4635	8374556	8374562	7mer-m8	8374555	8374575	162	-23.77
CAediting_468389	chr6_31355314_-	ENSG00000269386.4	ENST00000593581.4	hsa-miR-6891-5p	8390220	8390226	7mer-m8	8390219	8390239	151	-26.39

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for RAB11B-AS1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for RAB11B-AS1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LIHC	CAediting_1286394	chr19_8374592_-	0.0205731653930101	0.317384854195839	.	.	.	.

Top

Relation with cancer stages for RAB11B-AS1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for RAB11B-AS1

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
STAD	CAediting_1286485	chr19_8388684_-	0.0483930940768795	0.0407828	0.0556244

Top

RelatedDrugs for RAB11B-AS1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for RAB11B-AS1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene