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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: OCLN (CAeditome ID:100506658)

Gene summary for OCLN

check button Gene summary
Gene informationGene symbol

OCLN

Gene ID

100506658

Gene nameoccludin
SynonymsBLCPMG|PPP1R115|PTORCH1
Cytomap

5q13.2

Type of geneprotein-coding
Descriptionoccludinphosphatase 1, regulatory subunit 115
Modification date20210518
UniProtAcc

Q16625

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
OCLN

GO:0005765

Occludin

28718701

OCLN

GO:0005886

Occludin

0000052

OCLN

GO:0005886

Occludin

11090614

OCLN

GO:0005911

Occludin

19332538

OCLN

GO:0005911

Occludin

21415414

OCLN

GO:0005911

Occludin

23288152

OCLN

GO:0005923

Occludin

20028514

OCLN

GO:0005923

Occludin

20164257

OCLN

GO:0030054

Occludin

0000052

OCLN

GO:0030054

Occludin

24567356

OCLN

GO:0031410

Occludin

20164257

OCLN

GO:0070160

Occludin

30734065

OCLN

GO:0032991

Occludin

26607202


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RNA A-to-I events for OCLN

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000197822.9
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_413399(69504773, +), CAediting_413400(69504774, +), CAediting_413401(69504777, +), CAediting_413402(69504788, +), CAediting_413403(69507196, +), CAediting_413404(69507234, +), CAediting_413405(69507235, +), CAediting_413406(69507238, +), CAediting_413407(69507705, +), CAediting_413408(69510408, +), CAediting_413409(69510556, +), CAediting_413410(69511094, +), CAediting_413411(69511111, +), CAediting_413412(69511149, +), CAediting_413413(69511202, +), CAediting_413414(69511214, +), CAediting_413415(69511216, +), CAediting_413416(69511433, +), CAediting_413417(69511451, +), CAediting_413418(69511479, +), CAediting_413419(69511481, +), CAediting_413420(69511486, +), CAediting_413421(69511491, +), CAediting_413422(69511512, +), CAediting_413423(69511524, +), CAediting_413424(69511529, +), CAediting_413425(69511541, +), CAediting_413426(69511545, +), CAediting_413427(69511551, +), CAediting_413428(69511578, +), CAediting_413429(69511599, +), CAediting_413430(69511605, +), CAediting_413431(69511650, +), CAediting_413432(69511756, +), CAediting_413433(69511761, +), CAediting_413434(69511786, +), CAediting_413435(69511838, +), CAediting_413436(69511848, +), CAediting_413437(69511849, +), CAediting_413438(69511854, +), CAediting_413439(69511860, +), CAediting_413440(69511874, +), CAediting_413441(69511875, +), CAediting_413442(69511878, +), CAediting_413443(69511902, +), CAediting_413444(69511903, +), CAediting_413445(69511908, +), CAediting_413446(69511912, +), CAediting_413447(69511916, +), CAediting_413448(69511919, +), CAediting_413449(69511925, +), CAediting_413450(69511929, +), CAediting_413451(69511934, +), CAediting_413452(69511935, +), CAediting_413453(69511938, +), CAediting_413454(69511944, +), CAediting_413455(69511998, +), CAediting_413456(69512013, +), CAediting_413457(69516795, +), CAediting_413458(69516824, +), CAediting_413459(69516837, +), CAediting_413460(69516861, +), CAediting_413461(69516866, +), CAediting_413462(69516873, +), CAediting_413463(69516896, +), CAediting_413464(69516897, +), CAediting_413465(69516898, +), CAediting_413466(69516899, +), CAediting_413467(69516901, +), CAediting_413468(69516903, +), CAediting_413469(69516905, +), CAediting_413470(69516907, +), CAediting_413471(69516931, +), CAediting_413472(69516949, +), CAediting_413473(69516953, +), CAediting_413474(69517012, +), CAediting_413475(69517444, +), CAediting_413476(69517477, +), CAediting_413477(69517522, +), CAediting_413478(69518917, +), CAediting_413479(69518935, +), CAediting_413480(69518972, +), CAediting_413481(69519035, +), CAediting_413482(69519985, +), CAediting_413483(69520002, +), CAediting_413484(69520015, +), CAediting_413485(69520058, +), CAediting_413486(69520059, +), CAediting_413487(69520076, +), CAediting_413488(69520088, +), CAediting_413489(69520193, +), CAediting_413490(69520746, +), CAediting_413491(69520912, +), CAediting_413492(69520917, +), CAediting_413493(69520925, +), CAediting_413494(69520947, +), CAediting_413495(69520977, +), CAediting_413496(69520987, +), CAediting_413497(69521498, +), CAediting_413498(69521503, +), CAediting_413499(69521514, +), CAediting_413500(69521520, +), CAediting_413501(69521524, +), CAediting_413502(69521531, +), CAediting_413503(69521539, +), CAediting_413504(69521541, +), CAediting_413505(69521544, +), CAediting_413506(69521560, +), CAediting_413507(69521561, +), CAediting_413508(69521575, +), CAediting_413509(69521583, +), CAediting_413510(69521609, +), CAediting_413511(69521621, +), CAediting_413512(69521622, +), CAediting_413513(69524063, +), CAediting_413514(69524069, +), CAediting_413515(69524130, +), CAediting_413516(69527156, +), CAediting_413517(69532258, +), CAediting_413518(69532272, +), CAediting_413519(69532296, +), CAediting_413520(69532337, +), CAediting_413521(69532781, +), CAediting_413522(69532883, +), CAediting_413523(69533701, +), CAediting_413524(69533717, +), CAediting_413525(69535915, +), CAediting_413526(69536061, +), CAediting_413527(69536062, +), CAediting_413528(69536853, +), CAediting_413529(69538919, +), CAediting_413530(69548726, +), CAediting_413531(69549143, +), CAediting_413532(69549290, +), CAediting_413533(69549291, +), CAediting_413534(69554961, +), CAediting_413535(69555022, +), CAediting_413536(69555036, +), CAediting_413537(69555065, +), CAediting_413538(69555070, +), CAediting_413539(69555075, +), CAediting_413540(69555085, +), CAediting_413541(69555116, +), CAediting_413542(69555119, +), CAediting_413543(69555133, +), CAediting_413544(69555195, +), CAediting_413545(69555196, +), CAediting_413546(69555210, +), CAediting_413547(69555341, +), CAediting_413548(69555344, +), CAediting_413549(69555365, +), CAediting_413550(69555393, +), CAediting_413551(69555421, +), CAediting_413552(69555478, +), CAediting_413553(69555529, +), CAediting_413554(69555531, +), CAediting_413555(69555543, +), CAediting_413556(69555552, +),

Top

RNA editing positional annotations for OCLN using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_413399chr5_69504773_+intronic
CAediting_413400chr5_69504774_+intronic
CAediting_413401chr5_69504777_+intronic
CAediting_413402chr5_69504788_+intronic
CAediting_413403chr5_69507196_+intronic
CAediting_413404chr5_69507234_+intronic
CAediting_413405chr5_69507235_+intronic
CAediting_413406chr5_69507238_+intronic
CAediting_413407chr5_69507705_+intronic
CAediting_413408chr5_69510408_+intronic
CAediting_413409chr5_69510556_+intronic
CAediting_413410chr5_69511094_+intronic
CAediting_413411chr5_69511111_+intronic
CAediting_413412chr5_69511149_+intronic
CAediting_413413chr5_69511202_+intronic
CAediting_413414chr5_69511214_+intronic
CAediting_413415chr5_69511216_+intronic
CAediting_413416chr5_69511433_+intronic
CAediting_413417chr5_69511451_+intronic
CAediting_413418chr5_69511479_+intronic
CAediting_413419chr5_69511481_+intronic
CAediting_413420chr5_69511486_+intronic
CAediting_413421chr5_69511491_+intronic
CAediting_413422chr5_69511512_+intronic
CAediting_413423chr5_69511524_+intronic
CAediting_413424chr5_69511529_+intronic
CAediting_413425chr5_69511541_+intronic
CAediting_413426chr5_69511545_+intronic
CAediting_413427chr5_69511551_+intronic
CAediting_413428chr5_69511578_+intronic
CAediting_413429chr5_69511599_+intronic
CAediting_413430chr5_69511605_+intronic
CAediting_413431chr5_69511650_+intronic
CAediting_413432chr5_69511756_+intronic
CAediting_413433chr5_69511761_+intronic
CAediting_413434chr5_69511786_+intronic
CAediting_413435chr5_69511838_+intronic
CAediting_413436chr5_69511848_+intronic
CAediting_413437chr5_69511849_+intronic
CAediting_413438chr5_69511854_+intronic
CAediting_413439chr5_69511860_+intronic
CAediting_413440chr5_69511874_+intronic
CAediting_413441chr5_69511875_+intronic
CAediting_413442chr5_69511878_+intronic
CAediting_413443chr5_69511902_+intronic
CAediting_413444chr5_69511903_+intronic
CAediting_413445chr5_69511908_+intronic
CAediting_413446chr5_69511912_+intronic
CAediting_413447chr5_69511916_+intronic
CAediting_413448chr5_69511919_+intronic
CAediting_413449chr5_69511925_+intronic
CAediting_413450chr5_69511929_+intronic
CAediting_413451chr5_69511934_+intronic
CAediting_413452chr5_69511935_+intronic
CAediting_413453chr5_69511938_+intronic
CAediting_413454chr5_69511944_+intronic
CAediting_413455chr5_69511998_+intronic
CAediting_413456chr5_69512013_+intronic
CAediting_413457chr5_69516795_+intronic
CAediting_413458chr5_69516824_+intronic
CAediting_413459chr5_69516837_+intronic
CAediting_413460chr5_69516861_+intronic
CAediting_413461chr5_69516866_+intronic
CAediting_413462chr5_69516873_+intronic
CAediting_413463chr5_69516896_+intronic
CAediting_413464chr5_69516897_+intronic
CAediting_413465chr5_69516898_+intronic
CAediting_413466chr5_69516899_+intronic
CAediting_413467chr5_69516901_+intronic
CAediting_413468chr5_69516903_+intronic
CAediting_413469chr5_69516905_+intronic
CAediting_413470chr5_69516907_+intronic
CAediting_413471chr5_69516931_+intronic
CAediting_413472chr5_69516949_+intronic
CAediting_413473chr5_69516953_+intronic
CAediting_413474chr5_69517012_+intronic
CAediting_413475chr5_69517444_+intronic
CAediting_413476chr5_69517477_+intronic
CAediting_413477chr5_69517522_+intronic
CAediting_413478chr5_69518917_+intronic
CAediting_413479chr5_69518935_+intronic
CAediting_413480chr5_69518972_+intronic
CAediting_413481chr5_69519035_+intronic
CAediting_413482chr5_69519985_+intronic
CAediting_413483chr5_69520002_+intronic
CAediting_413484chr5_69520015_+intronic
CAediting_413485chr5_69520058_+intronic
CAediting_413486chr5_69520059_+intronic
CAediting_413487chr5_69520076_+intronic
CAediting_413488chr5_69520088_+intronic
CAediting_413489chr5_69520193_+intronic
CAediting_413490chr5_69520746_+intronic
CAediting_413491chr5_69520912_+intronic
CAediting_413492chr5_69520917_+intronic
CAediting_413493chr5_69520925_+intronic
CAediting_413494chr5_69520947_+intronic
CAediting_413495chr5_69520977_+intronic
CAediting_413496chr5_69520987_+intronic
CAediting_413497chr5_69521498_+intronic
CAediting_413498chr5_69521503_+intronic
CAediting_413499chr5_69521514_+intronic
CAediting_413500chr5_69521520_+intronic
CAediting_413501chr5_69521524_+intronic
CAediting_413502chr5_69521531_+intronic
CAediting_413503chr5_69521539_+intronic
CAediting_413504chr5_69521541_+intronic
CAediting_413505chr5_69521544_+intronic
CAediting_413506chr5_69521560_+intronic
CAediting_413507chr5_69521561_+intronic
CAediting_413508chr5_69521575_+intronic
CAediting_413509chr5_69521583_+intronic
CAediting_413510chr5_69521609_+intronic
CAediting_413511chr5_69521621_+intronic
CAediting_413512chr5_69521622_+intronic
CAediting_413513chr5_69524063_+intronic
CAediting_413514chr5_69524069_+intronic
CAediting_413515chr5_69524130_+intronic
CAediting_413516chr5_69527156_+intronic
CAediting_413517chr5_69532258_+intronic
CAediting_413518chr5_69532272_+intronic
CAediting_413519chr5_69532296_+intronic
CAediting_413520chr5_69532337_+intronic
CAediting_413521chr5_69532781_+intronic
CAediting_413522chr5_69532883_+intronic
CAediting_413523chr5_69533701_+intronic
CAediting_413524chr5_69533717_+intronic
CAediting_413525chr5_69535915_+intronic
CAediting_413526chr5_69536061_+intronic
CAediting_413527chr5_69536062_+intronic
CAediting_413528chr5_69536853_+intronic
CAediting_413529chr5_69538919_+intronic
CAediting_413530chr5_69548726_+ncRNA_intronic
CAediting_413531chr5_69549143_+ncRNA_intronic
CAediting_413532chr5_69549290_+ncRNA_intronic
CAediting_413533chr5_69549291_+ncRNA_intronic
CAediting_413534chr5_69554961_+UTR3
CAediting_413535chr5_69555022_+UTR3
CAediting_413536chr5_69555036_+UTR3
CAediting_413537chr5_69555065_+UTR3
CAediting_413538chr5_69555070_+UTR3
CAediting_413539chr5_69555075_+UTR3
CAediting_413540chr5_69555085_+UTR3
CAediting_413541chr5_69555116_+UTR3
CAediting_413542chr5_69555119_+UTR3
CAediting_413543chr5_69555133_+UTR3
CAediting_413544chr5_69555195_+UTR3
CAediting_413545chr5_69555196_+UTR3
CAediting_413546chr5_69555210_+UTR3
CAediting_413547chr5_69555341_+UTR3
CAediting_413548chr5_69555344_+UTR3
CAediting_413549chr5_69555365_+UTR3
CAediting_413550chr5_69555393_+UTR3
CAediting_413551chr5_69555421_+UTR3
CAediting_413552chr5_69555478_+UTR3
CAediting_413553chr5_69555529_+UTR3
CAediting_413554chr5_69555531_+UTR3
CAediting_413555chr5_69555543_+UTR3
CAediting_413556chr5_69555552_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_413399chr5_69504773_+SINEAluAluSc
CAediting_413400chr5_69504774_+SINEAluAluSc
CAediting_413401chr5_69504777_+SINEAluAluSc
CAediting_413402chr5_69504788_+SINEAluAluSc
CAediting_413403chr5_69507196_+SINEAluAluSx1
CAediting_413404chr5_69507234_+SINEAluAluSx1
CAediting_413405chr5_69507235_+SINEAluAluSx1
CAediting_413406chr5_69507238_+SINEAluAluSx1
CAediting_413407chr5_69507705_+SINEAluAluSq2
CAediting_413408chr5_69510408_+SINEAluAluY
CAediting_413409chr5_69510556_+SINEAluAluY
CAediting_413410chr5_69511094_+SINEAluAluY
CAediting_413411chr5_69511111_+SINEAluAluY
CAediting_413412chr5_69511149_+SINEAluAluY
CAediting_413413chr5_69511202_+SINEAluAluY
CAediting_413414chr5_69511214_+SINEAluAluY
CAediting_413415chr5_69511216_+SINEAluAluY
CAediting_413416chr5_69511433_+SINEAluAluJb
CAediting_413417chr5_69511451_+SINEAluAluJb
CAediting_413418chr5_69511479_+SINEAluAluJb
CAediting_413419chr5_69511481_+SINEAluAluJb
CAediting_413420chr5_69511486_+SINEAluAluJb
CAediting_413421chr5_69511491_+SINEAluAluJb
CAediting_413422chr5_69511512_+SINEAluAluJb
CAediting_413423chr5_69511524_+SINEAluAluJb
CAediting_413424chr5_69511529_+SINEAluAluJb
CAediting_413425chr5_69511541_+SINEAluAluJb
CAediting_413426chr5_69511545_+SINEAluAluJb
CAediting_413427chr5_69511551_+SINEAluAluJb
CAediting_413428chr5_69511578_+SINEAluAluJb
CAediting_413429chr5_69511599_+SINEAluAluJb
CAediting_413430chr5_69511605_+SINEAluAluJb
CAediting_413431chr5_69511650_+SINEAluAluJb
CAediting_413432chr5_69511756_+SINEAluAluSq
CAediting_413433chr5_69511761_+SINEAluAluSq
CAediting_413434chr5_69511786_+SINEAluAluSq
CAediting_413435chr5_69511838_+SINEAluAluSq
CAediting_413436chr5_69511848_+SINEAluAluSq
CAediting_413437chr5_69511849_+SINEAluAluSq
CAediting_413438chr5_69511854_+SINEAluAluSq
CAediting_413439chr5_69511860_+SINEAluAluSq
CAediting_413440chr5_69511874_+SINEAluAluSq
CAediting_413441chr5_69511875_+SINEAluAluSq
CAediting_413442chr5_69511878_+SINEAluAluSq
CAediting_413443chr5_69511902_+SINEAluAluSq
CAediting_413444chr5_69511903_+SINEAluAluSq
CAediting_413445chr5_69511908_+SINEAluAluSq
CAediting_413446chr5_69511912_+SINEAluAluSq
CAediting_413447chr5_69511916_+SINEAluAluSq
CAediting_413448chr5_69511919_+SINEAluAluSq
CAediting_413449chr5_69511925_+SINEAluAluSq
CAediting_413450chr5_69511929_+SINEAluAluSq
CAediting_413451chr5_69511934_+SINEAluAluSq
CAediting_413452chr5_69511935_+SINEAluAluSq
CAediting_413453chr5_69511938_+SINEAluAluSq
CAediting_413454chr5_69511944_+SINEAluAluSq
CAediting_413455chr5_69511998_+SINEAluAluSq
CAediting_413456chr5_69512013_+SINEAluAluSq
CAediting_413457chr5_69516795_+SINEAluAluJb
CAediting_413458chr5_69516824_+SINEAluAluJb
CAediting_413459chr5_69516837_+SINEAluAluJb
CAediting_413460chr5_69516861_+SINEAluAluJb
CAediting_413461chr5_69516866_+SINEAluAluJb
CAediting_413462chr5_69516873_+SINEAluAluJb
CAediting_413463chr5_69516896_+SINEAluAluJb
CAediting_413464chr5_69516897_+SINEAluAluJb
CAediting_413465chr5_69516898_+SINEAluAluJb
CAediting_413466chr5_69516899_+SINEAluAluJb
CAediting_413467chr5_69516901_+SINEAluAluJb
CAediting_413468chr5_69516903_+SINEAluAluJb
CAediting_413469chr5_69516905_+SINEAluAluJb
CAediting_413470chr5_69516907_+SINEAluAluJb
CAediting_413471chr5_69516931_+SINEAluAluJb
CAediting_413472chr5_69516949_+SINEAluAluJb
CAediting_413473chr5_69516953_+SINEAluAluJb
CAediting_413474chr5_69517012_+SINEAluAluJb
CAediting_413475chr5_69517444_+SINEAluAluSz
CAediting_413476chr5_69517477_+SINEAluAluSz
CAediting_413477chr5_69517522_+SINEAluAluSz
CAediting_413478chr5_69518917_+SINEAluAluJb
CAediting_413479chr5_69518935_+SINEAluAluJb
CAediting_413480chr5_69518972_+SINEAluAluJb
CAediting_413481chr5_69519035_+SINEAluAluJb
CAediting_413482chr5_69519985_+SINEAluAluSx1
CAediting_413483chr5_69520002_+SINEAluAluSx1
CAediting_413484chr5_69520015_+SINEAluAluSx1
CAediting_413485chr5_69520058_+SINEAluAluSx1
CAediting_413486chr5_69520059_+SINEAluAluSx1
CAediting_413487chr5_69520076_+SINEAluAluSx1
CAediting_413488chr5_69520088_+SINEAluAluSx1
CAediting_413489chr5_69520193_+SINEAluAluSx1
CAediting_413490chr5_69520746_+SINEAluAluJo
CAediting_413491chr5_69520912_+SINEAluAluSx
CAediting_413492chr5_69520917_+SINEAluAluSx
CAediting_413493chr5_69520925_+SINEAluAluSx
CAediting_413494chr5_69520947_+SINEAluAluSx
CAediting_413495chr5_69520977_+SINEAluAluSx
CAediting_413496chr5_69520987_+SINEAluAluSx
CAediting_413497chr5_69521498_+SINEAluAluJo
CAediting_413498chr5_69521503_+SINEAluAluJo
CAediting_413499chr5_69521514_+SINEAluAluJo
CAediting_413500chr5_69521520_+SINEAluAluJo
CAediting_413501chr5_69521524_+SINEAluAluJo
CAediting_413502chr5_69521531_+SINEAluAluJo
CAediting_413503chr5_69521539_+SINEAluAluJo
CAediting_413504chr5_69521541_+SINEAluAluJo
CAediting_413505chr5_69521544_+SINEAluAluJo
CAediting_413506chr5_69521560_+SINEAluAluJo
CAediting_413507chr5_69521561_+SINEAluAluJo
CAediting_413508chr5_69521575_+SINEAluAluJo
CAediting_413509chr5_69521583_+SINEAluAluJo
CAediting_413510chr5_69521609_+SINEAluAluJo
CAediting_413511chr5_69521621_+SINEAluAluJo
CAediting_413512chr5_69521622_+SINEAluAluJo
CAediting_413513chr5_69524063_+SINEAluAluSz
CAediting_413514chr5_69524069_+SINEAluAluSz
CAediting_413515chr5_69524130_+SINEAluAluSz
CAediting_413516chr5_69527156_+SINEAluAluSx1
CAediting_413517chr5_69532258_+SINEAluAluJb
CAediting_413518chr5_69532272_+SINEAluAluJb
CAediting_413519chr5_69532296_+SINEAluAluJb
CAediting_413520chr5_69532337_+SINEAluAluJb
CAediting_413521chr5_69532781_+SINEAluAluSx1
CAediting_413522chr5_69532883_+SINEAluAluSx1
CAediting_413523chr5_69533701_+SINEAluAluSc8
CAediting_413524chr5_69533717_+SINEAluAluSc8
CAediting_413525chr5_69535915_+SINEAluAluSp
CAediting_413526chr5_69536061_+SINEAluAluSp
CAediting_413527chr5_69536062_+SINEAluAluSp
CAediting_413528chr5_69536853_+SINEAluAluY
CAediting_413529chr5_69538919_+SINEAluAluJr4
CAediting_413530chr5_69548726_+SINEAluAluSx1
CAediting_413531chr5_69549143_+SINEAluAluY
CAediting_413532chr5_69549290_+SINEAluAluY
CAediting_413533chr5_69549291_+SINEAluAluY
CAediting_413534chr5_69554961_+SINEAluAluSx4
CAediting_413535chr5_69555022_+SINEAluAluSx4
CAediting_413536chr5_69555036_+SINEAluAluSx4
CAediting_413537chr5_69555065_+SINEAluAluSx4
CAediting_413538chr5_69555070_+SINEAluAluSx4
CAediting_413539chr5_69555075_+SINEAluAluSx4
CAediting_413540chr5_69555085_+SINEAluAluSx4
CAediting_413541chr5_69555116_+SINEAluAluSx4
CAediting_413542chr5_69555119_+SINEAluAluSx4
CAediting_413543chr5_69555133_+SINEAluAluSx4
CAediting_413544chr5_69555195_+SINEAluAluSx4
CAediting_413545chr5_69555196_+SINEAluAluSx4
CAediting_413546chr5_69555210_+SINEAluAluSx4
CAediting_413547chr5_69555341_+SINEAluAluSp
CAediting_413548chr5_69555344_+SINEAluAluSp
CAediting_413549chr5_69555365_+SINEAluAluSp
CAediting_413550chr5_69555393_+SINEAluAluSp
CAediting_413551chr5_69555421_+SINEAluAluSp
CAediting_413552chr5_69555478_+SINEAluAluSp
CAediting_413553chr5_69555529_+SINEAluAluSp
CAediting_413554chr5_69555531_+SINEAluAluSp
CAediting_413555chr5_69555543_+SINEAluAluSp
CAediting_413556chr5_69555552_+SINEAluAluSp

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RNA A-to-I editing events in the alternative splicing sites for OCLN

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_413482chr5_69519985_+69519966:695199883SS0+1iGTTTGTTTGTTTTTGAGACAGTC-13.45GTTTGTTTGTTTTTGAGACGGTC-4.69

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000197822.9.OCLN.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000197822.9.OCLN.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for OCLN

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for OCLN

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for OCLN

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_413534chr5_69554961_+ENSG00000197822.9ENST00000355237hsa-miR-340-3p69554955695549628mer-1a6955494169554962146.00-18.22
CAediting_413534chr5_69554961_+ENSG00000197822.9ENST00000355237hsa-miR-6827-3p69554955695549628mer-1a6955494269554962140.00-14.67
CAediting_413534chr5_69554961_+ENSG00000197822.9ENST00000538151hsa-miR-340-3p69554955695549628mer-1a6955494169554962146.00-18.22
CAediting_413534chr5_69554961_+ENSG00000197822.9ENST00000538151hsa-miR-6827-3p69554955695549628mer-1a6955494269554962140.00-14.67
CAediting_413535chr5_69555022_+ENSG00000197822.9ENST00000355237hsa-miR-25-5p69555017695550237mer-m86955500569555024143.00-19.97
CAediting_413535chr5_69555022_+ENSG00000197822.9ENST00000355237hsa-miR-65869555016695550227mer-m86955499769555023153.00-29.29
CAediting_413535chr5_69555022_+ENSG00000197822.9ENST00000538151hsa-miR-25-5p69555017695550237mer-m86955500569555024143.00-19.97
CAediting_413535chr5_69555022_+ENSG00000197822.9ENST00000538151hsa-miR-65869555016695550227mer-m86955499769555023153.00-29.29
CAediting_413536chr5_69555036_+ENSG00000197822.9ENST00000355237hsa-miR-453969555030695550356mer6955501769555036145.00-21.50
CAediting_413536chr5_69555036_+ENSG00000197822.9ENST00000538151hsa-miR-453969555030695550356mer6955501769555036145.00-21.50
CAediting_413539chr5_69555075_+ENSG00000197822.9ENST00000355237hsa-miR-17-3p69555071695550777mer-m86955505669555078150.00-20.07
CAediting_413539chr5_69555075_+ENSG00000197822.9ENST00000538151hsa-miR-17-3p69555071695550777mer-m86955505669555078150.00-20.07
CAediting_413542chr5_69555119_+ENSG00000197822.9ENST00000355237hsa-miR-136-5p69555115695551228mer-1a6955510069555122140.00-9.33
CAediting_413542chr5_69555119_+ENSG00000197822.9ENST00000538151hsa-miR-136-5p69555115695551228mer-1a6955510069555122140.00-9.33
CAediting_413543chr5_69555133_+ENSG00000197822.9ENST00000355237hsa-miR-548o-3p69555127695551326mer6955511369555133142.00-10.61
CAediting_413543chr5_69555133_+ENSG00000197822.9ENST00000355237hsa-miR-548o-3p69555127695551326mer6955511369555133142.00-10.61
CAediting_413543chr5_69555133_+ENSG00000197822.9ENST00000355237hsa-miR-807469555132695551376mer6955511569555138141.00-25.95
CAediting_413543chr5_69555133_+ENSG00000197822.9ENST00000538151hsa-miR-548o-3p69555127695551326mer6955511369555133142.00-10.61
CAediting_413543chr5_69555133_+ENSG00000197822.9ENST00000538151hsa-miR-548o-3p69555127695551326mer6955511369555133142.00-10.61
CAediting_413543chr5_69555133_+ENSG00000197822.9ENST00000538151hsa-miR-807469555132695551376mer6955511569555138141.00-25.95
CAediting_413544chr5_69555195_+ENSG00000197822.9ENST00000355237hsa-miR-32669555190695551967mer-m86955517869555197140.00-14.60
CAediting_413544chr5_69555195_+ENSG00000197822.9ENST00000355237hsa-miR-330-5p69555190695551967mer-m86955517669555197140.00-22.38
CAediting_413544chr5_69555195_+ENSG00000197822.9ENST00000355237hsa-miR-431469555189695551957mer-m86955517969555196140.00-21.61
CAediting_413544chr5_69555195_+ENSG00000197822.9ENST00000355237hsa-miR-514a-5p69555191695551977mer-m86955517369555198147.00-19.08
CAediting_413544chr5_69555195_+ENSG00000197822.9ENST00000355237hsa-miR-514a-5p69555191695551977mer-m86955517369555198147.00-19.08
CAediting_413544chr5_69555195_+ENSG00000197822.9ENST00000355237hsa-miR-514a-5p69555191695551977mer-m86955517369555198147.00-19.08
CAediting_413544chr5_69555195_+ENSG00000197822.9ENST00000538151hsa-miR-32669555190695551967mer-m86955517869555197140.00-14.60
CAediting_413544chr5_69555195_+ENSG00000197822.9ENST00000538151hsa-miR-330-5p69555190695551967mer-m86955517669555197140.00-22.38
CAediting_413544chr5_69555195_+ENSG00000197822.9ENST00000538151hsa-miR-431469555189695551957mer-m86955517969555196140.00-21.61
CAediting_413544chr5_69555195_+ENSG00000197822.9ENST00000538151hsa-miR-514a-5p69555191695551977mer-m86955517369555198147.00-19.08
CAediting_413544chr5_69555195_+ENSG00000197822.9ENST00000538151hsa-miR-514a-5p69555191695551977mer-m86955517369555198147.00-19.08
CAediting_413544chr5_69555195_+ENSG00000197822.9ENST00000538151hsa-miR-514a-5p69555191695551977mer-m86955517369555198147.00-19.08
CAediting_413545chr5_69555196_+ENSG00000197822.9ENST00000355237hsa-miR-3189-3p69555190695551967mer-m86955517869555197145.00-25.82
CAediting_413545chr5_69555196_+ENSG00000197822.9ENST00000355237hsa-miR-6813-3p69555191695551977mer-m86955517869555198140.00-12.15
CAediting_413545chr5_69555196_+ENSG00000197822.9ENST00000538151hsa-miR-3189-3p69555190695551967mer-m86955517869555197145.00-25.82
CAediting_413545chr5_69555196_+ENSG00000197822.9ENST00000538151hsa-miR-6813-3p69555191695551977mer-m86955517869555198140.00-12.15
CAediting_413548chr5_69555344_+ENSG00000197822.9ENST00000355237hsa-miR-485-5p69555341695553477mer-m86955532569555348150.00-19.87
CAediting_413548chr5_69555344_+ENSG00000197822.9ENST00000355237hsa-miR-6884-5p69555341695553477mer-m86955532569555348151.00-24.75
CAediting_413548chr5_69555344_+ENSG00000197822.9ENST00000355237hsa-miR-797469555339695553457mer-m86955532369555346151.00-22.54
CAediting_413548chr5_69555344_+ENSG00000197822.9ENST00000538151hsa-miR-485-5p69555341695553477mer-m86955532569555348150.00-19.87
CAediting_413548chr5_69555344_+ENSG00000197822.9ENST00000538151hsa-miR-6884-5p69555341695553477mer-m86955532569555348151.00-24.75
CAediting_413548chr5_69555344_+ENSG00000197822.9ENST00000538151hsa-miR-797469555339695553457mer-m86955532369555346151.00-22.54
CAediting_413549chr5_69555365_+ENSG00000197822.9ENST00000355237hsa-miR-302f69555363695553697mer-m86955535469555370147.00-8.32
CAediting_413549chr5_69555365_+ENSG00000197822.9ENST00000538151hsa-miR-302f69555363695553697mer-m86955535469555370147.00-8.32
CAediting_413550chr5_69555393_+ENSG00000197822.9ENST00000355237hsa-miR-4691-3p69555390695553967mer-m86955537069555397146.00-25.83
CAediting_413550chr5_69555393_+ENSG00000197822.9ENST00000538151hsa-miR-4691-3p69555390695553967mer-m86955537069555397146.00-25.83
CAediting_413553chr5_69555529_+ENSG00000197822.9ENST00000355237hsa-miR-6771-5p69555523695555308mer-1a6955550969555530151.00-23.75
CAediting_413553chr5_69555529_+ENSG00000197822.9ENST00000538151hsa-miR-6771-5p69555523695555308mer-1a6955550969555530151.00-23.75
CAediting_413554chr5_69555531_+ENSG00000197822.9ENST00000355237hsa-miR-3189-3p69555525695555317mer-m86955551369555532149.00-22.73
CAediting_413554chr5_69555531_+ENSG00000197822.9ENST00000355237hsa-miR-6813-3p69555526695555327mer-m86955551369555533140.00-11.60
CAediting_413554chr5_69555531_+ENSG00000197822.9ENST00000538151hsa-miR-3189-3p69555525695555317mer-m86955551369555532149.00-22.73
CAediting_413554chr5_69555531_+ENSG00000197822.9ENST00000538151hsa-miR-6813-3p69555526695555327mer-m86955551369555533140.00-11.60
CAediting_413556chr5_69555552_+ENSG00000197822.9ENST00000355237hsa-miR-66269555547695555526mer6955553169555553145.00-29.05
CAediting_413556chr5_69555552_+ENSG00000197822.9ENST00000355237hsa-miR-663b69555550695555567mer-m86955553869555557149.00-24.54
CAediting_413556chr5_69555552_+ENSG00000197822.9ENST00000538151hsa-miR-66269555547695555526mer6955553169555553145.00-29.05
CAediting_413556chr5_69555552_+ENSG00000197822.9ENST00000538151hsa-miR-663b69555550695555567mer-m86955553869555557149.00-24.54
CAediting_413538chr5_69555070_+ENSG00000197822.9ENST00000355237hsa-miR-5588-3p69555067695550748mer-1a6955505569555074148.00-15.91
CAediting_413538chr5_69555070_+ENSG00000197822.9ENST00000538151hsa-miR-5588-3p69555067695550748mer-1a6955505569555074148.00-15.91

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_413539chr5_69555075_+ENSG00000197822.9ENST00000355237hsa-miR-20b-3p69555071695550777mer-m86955505669555078153-17.07
CAediting_413553chr5_69555529_+ENSG00000197822.9ENST00000355237hsa-miR-30b-3p69555522695555298mer-1a6955550869555529155-20.01
CAediting_413534chr5_69554961_+ENSG00000197822.9ENST00000355237hsa-miR-3664-5p69554958695549647mer-m86955494469554965153-15.28
CAediting_413553chr5_69555529_+ENSG00000197822.9ENST00000355237hsa-miR-3689a-3p69555522695555298mer-1a6955550869555529145-21.24
CAediting_413553chr5_69555529_+ENSG00000197822.9ENST00000355237hsa-miR-3689b-3p69555522695555298mer-1a6955550869555529145-21.29
CAediting_413553chr5_69555529_+ENSG00000197822.9ENST00000355237hsa-miR-3689c69555522695555298mer-1a6955550869555529145-21.29
CAediting_413548chr5_69555344_+ENSG00000197822.9ENST00000355237hsa-miR-377-5p69555341695553477mer-m86955533169555348149-19.05
CAediting_413551chr5_69555421_+ENSG00000197822.9ENST00000355237hsa-miR-3934-5p69555418695554247mer-m86955540469555425152-24.98
CAediting_413556chr5_69555552_+ENSG00000197822.9ENST00000355237hsa-miR-428469555548695555558mer-1a6955553869555555145-15.61
CAediting_413552chr5_69555478_+ENSG00000197822.9ENST00000355237hsa-miR-429369555475695554817mer-m86955546669555482146-21.19
CAediting_413538chr5_69555070_+ENSG00000197822.9ENST00000355237hsa-miR-4474-5p69555068695550747mer-m86955505269555075151-12.77
CAediting_413539chr5_69555075_+ENSG00000197822.9ENST00000355237hsa-miR-4474-5p69555068695550747mer-m86955505269555075151-12.77
CAediting_413534chr5_69554961_+ENSG00000197822.9ENST00000355237hsa-miR-452269554959695549657mer-m86955494669554966148-12.83
CAediting_413550chr5_69555393_+ENSG00000197822.9ENST00000355237hsa-miR-569069555390695553967mer-m86955537769555397145-19.87
CAediting_413537chr5_69555065_+ENSG00000197822.9ENST00000355237hsa-miR-60669555061695550677mer-m86955504769555068146-7.11
CAediting_413548chr5_69555344_+ENSG00000197822.9ENST00000355237hsa-miR-608669555341695553477mer-m86955532969555348154-25.5
CAediting_413553chr5_69555529_+ENSG00000197822.9ENST00000355237hsa-miR-6779-5p69555522695555298mer-1a6955551169555529148-22.49
CAediting_413553chr5_69555529_+ENSG00000197822.9ENST00000355237hsa-miR-6780a-5p69555522695555298mer-1a6955550669555529148-20.77
CAediting_413534chr5_69554961_+ENSG00000197822.9ENST00000355237hsa-miR-6888-3p69554956695549627mer-m86955494369554963151-14.42
CAediting_413535chr5_69555022_+ENSG00000197822.9ENST00000355237hsa-miR-7847-3p69555016695550227mer-m86955500169555023146-19.07
CAediting_413547chr5_69555341_+ENSG00000197822.9ENST00000355237hsa-miR-7855-5p69555334695553407mer-m86955532069555341140-14.11
CAediting_413544chr5_69555195_+ENSG00000197822.9ENST00000355237hsa-miR-887-5p69555188695551958mer-1a6955517469555195150-16.01
CAediting_413553chr5_69555529_+ENSG00000197822.9ENST00000355237hsa-miR-887-5p69555523695555308mer-1a6955550969555530149-13.82
CAediting_413539chr5_69555075_+ENSG00000197822.9ENST00000538151hsa-miR-20b-3p69555071695550777mer-m86955505669555078153-17.07
CAediting_413553chr5_69555529_+ENSG00000197822.9ENST00000538151hsa-miR-30b-3p69555522695555298mer-1a6955550869555529155-20.01
CAediting_413534chr5_69554961_+ENSG00000197822.9ENST00000538151hsa-miR-3664-5p69554958695549647mer-m86955494469554965153-15.28
CAediting_413553chr5_69555529_+ENSG00000197822.9ENST00000538151hsa-miR-3689a-3p69555522695555298mer-1a6955550869555529145-21.24
CAediting_413553chr5_69555529_+ENSG00000197822.9ENST00000538151hsa-miR-3689b-3p69555522695555298mer-1a6955550869555529145-21.29
CAediting_413553chr5_69555529_+ENSG00000197822.9ENST00000538151hsa-miR-3689c69555522695555298mer-1a6955550869555529145-21.29
CAediting_413548chr5_69555344_+ENSG00000197822.9ENST00000538151hsa-miR-377-5p69555341695553477mer-m86955533169555348149-19.05
CAediting_413551chr5_69555421_+ENSG00000197822.9ENST00000538151hsa-miR-3934-5p69555418695554247mer-m86955540469555425152-24.98
CAediting_413556chr5_69555552_+ENSG00000197822.9ENST00000538151hsa-miR-428469555548695555558mer-1a6955553869555555145-15.61
CAediting_413552chr5_69555478_+ENSG00000197822.9ENST00000538151hsa-miR-429369555475695554817mer-m86955546669555482146-21.19
CAediting_413538chr5_69555070_+ENSG00000197822.9ENST00000538151hsa-miR-4474-5p69555068695550747mer-m86955505269555075151-12.77
CAediting_413539chr5_69555075_+ENSG00000197822.9ENST00000538151hsa-miR-4474-5p69555068695550747mer-m86955505269555075151-12.77
CAediting_413534chr5_69554961_+ENSG00000197822.9ENST00000538151hsa-miR-452269554959695549657mer-m86955494669554966148-12.83
CAediting_413550chr5_69555393_+ENSG00000197822.9ENST00000538151hsa-miR-569069555390695553967mer-m86955537769555397145-19.87
CAediting_413537chr5_69555065_+ENSG00000197822.9ENST00000538151hsa-miR-60669555061695550677mer-m86955504769555068146-7.11
CAediting_413548chr5_69555344_+ENSG00000197822.9ENST00000538151hsa-miR-608669555341695553477mer-m86955532969555348154-25.5
CAediting_413553chr5_69555529_+ENSG00000197822.9ENST00000538151hsa-miR-6779-5p69555522695555298mer-1a6955551169555529148-22.49
CAediting_413553chr5_69555529_+ENSG00000197822.9ENST00000538151hsa-miR-6780a-5p69555522695555298mer-1a6955550669555529148-20.77
CAediting_413534chr5_69554961_+ENSG00000197822.9ENST00000538151hsa-miR-6888-3p69554956695549627mer-m86955494369554963151-14.42
CAediting_413535chr5_69555022_+ENSG00000197822.9ENST00000538151hsa-miR-7847-3p69555016695550227mer-m86955500169555023146-19.07
CAediting_413547chr5_69555341_+ENSG00000197822.9ENST00000538151hsa-miR-7855-5p69555334695553407mer-m86955532069555341140-14.11
CAediting_413544chr5_69555195_+ENSG00000197822.9ENST00000538151hsa-miR-887-5p69555188695551958mer-1a6955517469555195150-16.01
CAediting_413553chr5_69555529_+ENSG00000197822.9ENST00000538151hsa-miR-887-5p69555523695555308mer-1a6955550969555530149-13.82

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000197822.9ENST00000355237hsa-miR-624-3p69557833695578397mer-m86955781969557840154-15.18
CAediting_980496chr14_31014685_-ENSG00000197822.9ENST00000538151hsa-miR-624-3p69557833695578397mer-m86955781969557840154-15.18
CAediting_1160181chr17_7017644_-ENSG00000197822.9ENST00000355237hsa-miR-195-3p69553885695538917mer-m86955387169553892140-11.86
CAediting_77128chr1_85133844_+ENSG00000197822.9ENST00000355237hsa-miR-4423-3p69555078695550847mer-m86955506569555085145-20.14
CAediting_442554chr5_154685830_+ENSG00000197822.9ENST00000355237hsa-miR-130369557185695571928mer-1a6955717169557192159-21.56
CAediting_580943chr7_100356700_+ENSG00000197822.9ENST00000355237hsa-miR-6840-3p69555024695550307mer-m86955501069555031143-27.39
CAediting_1160181chr17_7017644_-ENSG00000197822.9ENST00000538151hsa-miR-195-3p69553885695538917mer-m86955387169553892140-11.86
CAediting_77128chr1_85133844_+ENSG00000197822.9ENST00000538151hsa-miR-4423-3p69555078695550847mer-m86955506569555085145-20.14
CAediting_442554chr5_154685830_+ENSG00000197822.9ENST00000538151hsa-miR-130369557185695571928mer-1a6955717169557192159-21.56
CAediting_580943chr7_100356700_+ENSG00000197822.9ENST00000538151hsa-miR-6840-3p69555024695550307mer-m86955501069555031143-27.39

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_573001chr7_92204086_-ENSG00000197822.9ENST00000355237hsa-miR-1285-5p69556620695566267mer-m86955660769556627154-18.73
CAediting_393chr1_1167164_+ENSG00000197822.9ENST00000355237hsa-miR-200b-3p69553809695538157mer-m86955379669553816149-14.42
CAediting_393chr1_1167164_+ENSG00000197822.9ENST00000355237hsa-miR-200b-3p69555821695558277mer-m86955580769555828142-7.98
CAediting_1229413chr17_67471544_+ENSG00000197822.9ENST00000355237hsa-miR-548aa69553923695539286mer6955390569553929142-8.76
CAediting_1229414chr17_67471546_+ENSG00000197822.9ENST00000355237hsa-miR-548aa69553923695539286mer6955390569553929142-8.76
CAediting_1229415chr17_67471547_+ENSG00000197822.9ENST00000355237hsa-miR-548aa69553923695539286mer6955390569553929142-8.76
CAediting_980496chr14_31014685_-ENSG00000197822.9ENST00000355237hsa-miR-624-3p69555164695551707mer-m86955515169555171143-16.44
CAediting_980496chr14_31014685_-ENSG00000197822.9ENST00000355237hsa-miR-624-3p69557081695570877mer-m86955706569557088150-17.11
CAediting_1351755chr19_40282625_-ENSG00000197822.9ENST00000355237hsa-miR-64169553980695539867mer-m86955396469553987150-9.34
CAediting_573001chr7_92204086_-ENSG00000197822.9ENST00000538151hsa-miR-1285-5p69556620695566267mer-m86955660769556627154-18.73
CAediting_393chr1_1167164_+ENSG00000197822.9ENST00000538151hsa-miR-200b-3p69553809695538157mer-m86955379669553816149-14.42
CAediting_393chr1_1167164_+ENSG00000197822.9ENST00000538151hsa-miR-200b-3p69555821695558277mer-m86955580769555828142-7.98
CAediting_1229413chr17_67471544_+ENSG00000197822.9ENST00000538151hsa-miR-548aa69553923695539286mer6955390569553929142-8.76
CAediting_1229414chr17_67471546_+ENSG00000197822.9ENST00000538151hsa-miR-548aa69553923695539286mer6955390569553929142-8.76
CAediting_1229415chr17_67471547_+ENSG00000197822.9ENST00000538151hsa-miR-548aa69553923695539286mer6955390569553929142-8.76
CAediting_980496chr14_31014685_-ENSG00000197822.9ENST00000538151hsa-miR-624-3p69555164695551707mer-m86955515169555171143-16.44
CAediting_980496chr14_31014685_-ENSG00000197822.9ENST00000538151hsa-miR-624-3p69557081695570877mer-m86955706569557088150-17.11
CAediting_1351755chr19_40282625_-ENSG00000197822.9ENST00000538151hsa-miR-64169553980695539867mer-m86955396469553987150-9.34

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for OCLN

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000355237.5protein_codingSoverviewSoverview
ENST00000538151.2protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_413534ENST00000355237.5chr5_69554961_+-1787.10-1787.10-1827.10
CAediting_413535ENST00000355237.5chr5_69555022_+-1788.60-1787.10-1827.10
CAediting_413536ENST00000355237.5chr5_69555036_+-1790.80-1787.10-1827.10
CAediting_413537ENST00000355237.5chr5_69555065_+-1791.30-1787.10-1827.10
CAediting_413538ENST00000355237.5chr5_69555070_+-1788.00-1787.10-1827.10
CAediting_413539ENST00000355237.5chr5_69555075_+-1791.10-1787.10-1827.10
CAediting_413540ENST00000355237.5chr5_69555085_+-1788.50-1787.10-1827.10
CAediting_413541ENST00000355237.5chr5_69555116_+-1787.40-1787.10-1827.10
CAediting_413542ENST00000355237.5chr5_69555119_+-1789.70-1787.10-1827.10
CAediting_413543ENST00000355237.5chr5_69555133_+-1787.50-1787.10-1827.10
CAediting_413544ENST00000355237.5chr5_69555195_+-1789.80-1787.10-1827.10
CAediting_413545ENST00000355237.5chr5_69555196_+-1792.00-1787.10-1827.10
CAediting_413546ENST00000355237.5chr5_69555210_+-1786.40-1787.10-1827.10
CAediting_413547ENST00000355237.5chr5_69555341_+-1790.20-1787.10-1827.10
CAediting_413548ENST00000355237.5chr5_69555344_+-1789.80-1787.10-1827.10
CAediting_413549ENST00000355237.5chr5_69555365_+-1790.50-1787.10-1827.10
CAediting_413550ENST00000355237.5chr5_69555393_+-1790.40-1787.10-1827.10
CAediting_413551ENST00000355237.5chr5_69555421_+-1788.70-1787.10-1827.10
CAediting_413552ENST00000355237.5chr5_69555478_+-1788.30-1787.10-1827.10
CAediting_413553ENST00000355237.5chr5_69555529_+-1788.70-1787.10-1827.10
CAediting_413554ENST00000355237.5chr5_69555531_+-1787.70-1787.10-1827.10
CAediting_413555ENST00000355237.5chr5_69555543_+-1787.20-1787.10-1827.10
CAediting_413556ENST00000355237.5chr5_69555552_+-1791.10-1787.10-1827.10
CAediting_413534ENST00000538151.2chr5_69554961_+-1390.20-1390.20-1430.20
CAediting_413535ENST00000538151.2chr5_69555022_+-1391.70-1390.20-1430.20
CAediting_413536ENST00000538151.2chr5_69555036_+-1393.90-1390.20-1430.20
CAediting_413537ENST00000538151.2chr5_69555065_+-1394.40-1390.20-1430.20
CAediting_413538ENST00000538151.2chr5_69555070_+-1391.10-1390.20-1430.20
CAediting_413539ENST00000538151.2chr5_69555075_+-1394.20-1390.20-1430.20
CAediting_413540ENST00000538151.2chr5_69555085_+-1391.60-1390.20-1430.20
CAediting_413541ENST00000538151.2chr5_69555116_+-1391.80-1390.20-1430.20
CAediting_413542ENST00000538151.2chr5_69555119_+-1392.80-1390.20-1430.20
CAediting_413543ENST00000538151.2chr5_69555133_+-1390.60-1390.20-1430.20
CAediting_413544ENST00000538151.2chr5_69555195_+-1392.90-1390.20-1430.20
CAediting_413545ENST00000538151.2chr5_69555196_+-1395.10-1390.20-1430.20
CAediting_413546ENST00000538151.2chr5_69555210_+-1389.50-1390.20-1430.20
CAediting_413547ENST00000538151.2chr5_69555341_+-1393.30-1390.20-1430.20
CAediting_413548ENST00000538151.2chr5_69555344_+-1392.90-1390.20-1430.20
CAediting_413549ENST00000538151.2chr5_69555365_+-1393.60-1390.20-1430.20
CAediting_413550ENST00000538151.2chr5_69555393_+-1393.50-1390.20-1430.20
CAediting_413551ENST00000538151.2chr5_69555421_+-1391.80-1390.20-1430.20
CAediting_413552ENST00000538151.2chr5_69555478_+-1391.40-1390.20-1430.20
CAediting_413553ENST00000538151.2chr5_69555529_+-1391.80-1390.20-1430.20
CAediting_413554ENST00000538151.2chr5_69555531_+-1390.80-1390.20-1430.20
CAediting_413555ENST00000538151.2chr5_69555543_+-1390.30-1390.20-1430.20
CAediting_413556ENST00000538151.2chr5_69555552_+-1394.20-1390.20-1430.20

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Relation with ADAR for OCLN

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_413498chr5_69521503_+2.47185829682901e-050.428862330475116....
LUADCAediting_413498chr5_69521503_+0.01157212535655350.243272819617358....
LUADCAediting_413507chr5_69521561_+0.02828641087750550.304298798177242....
BRCACAediting_413510chr5_69521609_+0.002842905635796470.385003720395847....
LUADCAediting_413510chr5_69521609_+0.0001849187872792980.429610801119022....

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Relation with cancer stages for OCLN

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for OCLN

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for OCLN

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for OCLN

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
OCLNC0006142Malignant neoplasm of breast2CTD_human
OCLNC0678222Breast Carcinoma2CTD_human
OCLNC1257931Mammary Neoplasms, Human2CTD_human
OCLNC1458155Mammary Neoplasms2CTD_human
OCLNC3489725Pseudo-TORCH syndrome2GENOMICS_ENGLAND;ORPHANET
OCLNC4552078PSEUDO-TORCH SYNDROME 12CTD_human;GENOMICS_ENGLAND;UNIPROT
OCLNC4704874Mammary Carcinoma, Human2CTD_human
OCLNC0006826Malignant Neoplasms1CTD_human
OCLNC0007621Neoplastic Cell Transformation1CTD_human
OCLNC0019156Hepatic Veno-Occlusive Disease1CTD_human
OCLNC0022660Kidney Failure, Acute1CTD_human
OCLNC0027651Neoplasms1CTD_human
OCLNC0035309Retinal Diseases1CTD_human
OCLNC0038002Splenomegaly1CTD_human
OCLNC0086692Benign Neoplasm1CTD_human
OCLNC1565662Acute Kidney Insufficiency1CTD_human
OCLNC2609414Acute kidney injury1CTD_human
OCLNC2931662Baraitser Brett Piesowicz syndrome1ORPHANET