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Editing gene: MIR210HG (CAeditome ID:100506211)

Gene summary for MIR210HG

Gene summary

Gene information	Gene symbol	MIR210HG
	Gene ID	100506211
	Gene name	MIR210 host gene
	Synonyms	-
	Cytomap	11p15.5
	Type of gene	ncRNA
	Description	MIR210 host gene (non-protein coding)
	Modification date	20210518
	UniProtAcc	.
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for MIR210HG

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000247095.2

RNA A-to-I editing events in Cancer.

CAediting_790976(566731, -), CAediting_790977(566732, -), CAediting_790978(566740, -), CAediting_790979(566745, -), CAediting_790980(566763, -), CAediting_790981(566767, -), CAediting_790982(566772, -), CAediting_790983(566773, -), CAediting_790984(566799, -), CAediting_790985(566805, -), CAediting_790986(566812, -), CAediting_790987(566813, -), CAediting_790988(566814, -), CAediting_790989(566828, -), CAediting_790990(566838, -), CAediting_790991(566851, -), CAediting_790992(566905, -), CAediting_790993(566911, -), CAediting_790994(566919, -),

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RNA editing positional annotations for MIR210HG using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_790976	chr11_566731_-	ncRNA_exonic
CAediting_790977	chr11_566732_-	ncRNA_exonic
CAediting_790978	chr11_566740_-	ncRNA_exonic
CAediting_790979	chr11_566745_-	ncRNA_exonic
CAediting_790980	chr11_566763_-	ncRNA_exonic
CAediting_790981	chr11_566767_-	ncRNA_exonic
CAediting_790982	chr11_566772_-	ncRNA_exonic
CAediting_790983	chr11_566773_-	ncRNA_exonic
CAediting_790984	chr11_566799_-	ncRNA_exonic
CAediting_790985	chr11_566805_-	ncRNA_exonic
CAediting_790986	chr11_566812_-	ncRNA_exonic
CAediting_790987	chr11_566813_-	ncRNA_exonic
CAediting_790988	chr11_566814_-	ncRNA_exonic
CAediting_790989	chr11_566828_-	ncRNA_exonic
CAediting_790990	chr11_566838_-	ncRNA_exonic
CAediting_790991	chr11_566851_-	ncRNA_exonic
CAediting_790992	chr11_566905_-	ncRNA_exonic
CAediting_790993	chr11_566911_-	ncRNA_exonic
CAediting_790994	chr11_566919_-	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_790976	chr11_566731_-	SINE	Alu	AluSx1
CAediting_790977	chr11_566732_-	SINE	Alu	AluSx1
CAediting_790978	chr11_566740_-	SINE	Alu	AluSx1
CAediting_790979	chr11_566745_-	SINE	Alu	AluSx1
CAediting_790980	chr11_566763_-	SINE	Alu	AluSx1
CAediting_790981	chr11_566767_-	SINE	Alu	AluSx1
CAediting_790982	chr11_566772_-	SINE	Alu	AluSx1
CAediting_790983	chr11_566773_-	SINE	Alu	AluSx1
CAediting_790984	chr11_566799_-	SINE	Alu	AluSx1
CAediting_790985	chr11_566805_-	SINE	Alu	AluSx1
CAediting_790986	chr11_566812_-	SINE	Alu	AluSx1
CAediting_790987	chr11_566813_-	SINE	Alu	AluSx1
CAediting_790988	chr11_566814_-	SINE	Alu	AluSx1
CAediting_790989	chr11_566828_-	SINE	Alu	AluSx1
CAediting_790990	chr11_566838_-	SINE	Alu	AluSx1
CAediting_790991	chr11_566851_-	SINE	Alu	AluSx1
CAediting_790992	chr11_566905_-	SINE	Alu	AluSx1
CAediting_790993	chr11_566911_-	SINE	Alu	AluSx1
CAediting_790994	chr11_566919_-	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for MIR210HG

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000247095.2.MIR210HG.

Correlation between RNA A-to-I editing and PSI for ENSG00000247095.2.MIR210HG.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for MIR210HG

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for MIR210HG

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for MIR210HG

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_790983	chr11_566773_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-513a-5p	566772	566778	7mer-m8	566771	566788	140	-14.96
CAediting_790983	chr11_566773_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-638	566767	566773	7mer-1a	566767	566791	143	-29.48
CAediting_790976	chr11_566731_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-3155a	566727	566733	7mer-m8	566726	566747	141	-23.88
CAediting_790976	chr11_566731_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-3155b	566727	566733	7mer-m8	566726	566744	141	-22.98
CAediting_790976	chr11_566731_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-484	566727	566733	7mer-m8	566726	566747	151	-19.57
CAediting_790977	chr11_566732_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-9900	566727	566733	7mer-m8	566726	566745	155	-17.23
CAediting_790978	chr11_566740_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-4431	566737	566743	7mer-m8	566736	566757	140	-17.94
CAediting_790979	chr11_566745_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-1976	566741	566748	8mer-1a	566741	566762	152	-21.75
CAediting_790979	chr11_566745_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-6747-3p	566743	566750	8mer-1a	566743	566763	148	-23.24
CAediting_790980	chr11_566763_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-1207-3p	566763	566769	7mer-m8	566762	566779	140	-12.56
CAediting_790980	chr11_566763_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-646	566761	566767	7mer-m8	566760	566778	145	-16.24
CAediting_790984	chr11_566799_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-4662a-5p	566795	566801	7mer-m8	566794	566816	159	-15.01
CAediting_790985	chr11_566805_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-4742-3p	566804	566811	8mer-1a	566804	566826	142	-9.18
CAediting_790987	chr11_566813_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-325	566812	566819	8mer-1a	566812	566833	146	-10.35
CAediting_790988	chr11_566814_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-222-5p	566812	566819	8mer-1a	566812	566833	140	-9.84
CAediting_790988	chr11_566814_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-30a-3p	566810	566817	8mer-1a	566810	566834	150	-12.67
CAediting_790988	chr11_566814_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-30d-3p	566810	566817	8mer-1a	566810	566832	149	-12.58
CAediting_790988	chr11_566814_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-30e-3p	566810	566817	8mer-1a	566810	566834	150	-14.01
CAediting_790994	chr11_566919_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-4466	566915	566920	6mer	566914	566931	143	-31.27
CAediting_790989	chr11_566828_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-3188	566824	566830	7mer-m8	566823	566845	143	-14.94
CAediting_790989	chr11_566828_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-412-3p	566828	566834	7mer-m8	566827	566849	154	-18.91
CAediting_790989	chr11_566828_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-6754-3p	566828	566834	7mer-m8	566827	566851	150	-20.19
CAediting_790991	chr11_566851_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-3176	566847	566853	7mer-m8	566846	566864	160	-23.34
CAediting_790991	chr11_566851_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-3922-3p	566847	566853	7mer-m8	566846	566871	165	-26.76
CAediting_790993	chr11_566911_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-638	566905	566911	7mer-1a	566905	566929	155	-35.53
CAediting_790986	chr11_566812_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-630	566806	566813	8mer-1a	566806	566826	158	-12.84

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_790979	chr11_566745_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-3152-5p	566745	566751	7mer-m8	566744	566767	155	-18.08
CAediting_790991	chr11_566851_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-3663-5p	566847	566853	7mer-m8	566846	566868	141	-21.75
CAediting_790992	chr11_566905_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-4425	566902	566909	8mer-1a	566902	566923	150	-18
CAediting_790994	chr11_566919_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-4455	566914	566920	7mer-m8	566913	566929	143	-13.91
CAediting_790990	chr11_566838_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-4716-5p	566833	566839	7mer-m8	566832	566853	148	-14.09
CAediting_790992	chr11_566905_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-5089-5p	566904	566911	8mer-1a	566904	566926	148	-14.58
CAediting_790982	chr11_566772_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-5089-5p	566767	566773	7mer-m8	566766	566784	146	-13.74
CAediting_790981	chr11_566767_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-5089-5p	566767	566773	7mer-m8	566766	566784	146	-13.74
CAediting_790991	chr11_566851_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-6131	566846	566852	7mer-m8	566845	566863	140	-17.94
CAediting_790981	chr11_566767_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-6506-5p	566766	566772	7mer-m8	566765	566787	144	-14.79
CAediting_790992	chr11_566905_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-6513-5p	566904	566910	7mer-m8	566903	566924	151	-14.24

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000247095.2	ENST00000533920.1	hsa-miR-605-3p	567202	567208	7mer-m8	567201	567223	143	-18.4
CAediting_1306324	chr19_13836464_-	ENSG00000247095.2	ENST00000533920.1	hsa-miR-27a-3p	567426	567433	8mer-1a	567426	567446	150	-20.01
CAediting_748296	chr10_51299626_+	ENSG00000247095.2	ENST00000500447.1	hsa-miR-605-3p	567202	567208	7mer-m8	567201	567223	143	-18.4
CAediting_846604	chr11_93733708_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-1304-3p	566705	566712	8mer-1a	566705	566726	171	-35.91
CAediting_1306324	chr19_13836464_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-27a-3p	567426	567433	8mer-1a	567426	567446	150	-20.01
CAediting_748296	chr10_51299626_+	ENSG00000247095.2	ENST00000528245.1	hsa-miR-605-3p	567202	567208	7mer-m8	567201	567223	143	-18.4
CAediting_1306324	chr19_13836464_-	ENSG00000247095.2	ENST00000528245.1	hsa-miR-27a-3p	567426	567433	8mer-1a	567426	567446	150	-20.01
CAediting_1229414	chr17_67471546_+	ENSG00000247095.2	ENST00000533920.1	hsa-miR-548aa	567379	567385	7mer-m8	567378	567404	165	-17.86
CAediting_1054808	chr15_66496985_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-4512	566227	566233	7mer-m8	566226	566246	150	-24.62
CAediting_1054808	chr15_66496985_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-4512	566107	566114	8mer-1a	566107	566130	150	-22.87
CAediting_1229414	chr17_67471546_+	ENSG00000247095.2	ENST00000500447.1	hsa-miR-548aa	567379	567385	7mer-m8	567378	567404	165	-17.86
CAediting_1160181	chr17_7017644_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-195-3p	565660	565666	7mer-m8	565660	565680	140	-6.04
CAediting_1368054	chr19_46709310_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-320e	566422	566428	7mer-m8	566421	566437	146	-17.2
CAediting_524911	chr7_5495852_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-589-3p	566429	566435	7mer-m8	566428	566454	155	-27.03
CAediting_1229414	chr17_67471546_+	ENSG00000247095.2	ENST00000528245.1	hsa-miR-548aa	567379	567385	7mer-m8	567378	567404	165	-17.86

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1054808	chr15_66496985_-	ENSG00000247095.2	ENST00000533920.1	hsa-miR-4512	567571	567577	7mer-m8	567570	567591	140	-20.99
CAediting_748296	chr10_51299626_+	ENSG00000247095.2	ENST00000533920.1	hsa-miR-605-3p	567623	567629	7mer-m8	567622	567643	143	-15.88
CAediting_846604	chr11_93733708_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-1304-3p	565928	565934	7mer-m8	565927	565948	145	-12.56
CAediting_846604	chr11_93733708_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-1304-3p	566938	566945	8mer-1a	566938	566964	142	-19.67
CAediting_846604	chr11_93733708_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-1304-3p	566625	566631	7mer-m8	566624	566645	140	-13.81
CAediting_1306324	chr19_13836464_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-27a-3p	566079	566085	7mer-m8	566078	566097	149	-17.34
CAediting_1524209	chrX_134546392_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-503-5p	566577	566582	6mer	566573	566595	140	-17.55
CAediting_1524209	chrX_134546392_-	ENSG00000247095.2	ENST00000500447.1	hsa-miR-503-5p	566574	566579	6mer	566573	566595	140	-17.55
CAediting_228905	chr2_188297554_+	ENSG00000247095.2	ENST00000500447.1	hsa-miR-561-3p	567029	567035	7mer-m8	567028	567049	145	-7.69
CAediting_1054808	chr15_66496985_-	ENSG00000247095.2	ENST00000528245.1	hsa-miR-4512	567571	567577	7mer-m8	567570	567591	140	-20.99
CAediting_748296	chr10_51299626_+	ENSG00000247095.2	ENST00000528245.1	hsa-miR-605-3p	567623	567629	7mer-m8	567622	567643	143	-15.88

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for MIR210HG

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for MIR210HG

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for MIR210HG

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for MIR210HG

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for MIR210HG

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for MIR210HG

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene