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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: LUCAT1 (CAeditome ID:100505994)

Gene summary for LUCAT1

check button Gene summary
Gene informationGene symbol

LUCAT1

Gene ID

100505994

Gene namelung cancer associated transcript 1
SynonymsSCAL1|SCAT5
Cytomap

5q14.3

Type of genencRNA
DescriptionS-phase cancer-associated transcript 7lung cancer associated transcript 1 (non-protein coding)smoke and cancer associated lncRNA 1
Modification date20210531
UniProtAcc

.

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for LUCAT1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000248323.4
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_419971(91303407, -), CAediting_419972(91303431, -), CAediting_419973(91303494, -), CAediting_419974(91303495, -), CAediting_419975(91303503, -), CAediting_419976(91303513, -), CAediting_419977(91303514, -), CAediting_419978(91303519, -), CAediting_419979(91303536, -), CAediting_419980(91303562, -), CAediting_419981(91303566, -), CAediting_419982(91303572, -), CAediting_419983(91303575, -), CAediting_419984(91303578, -), CAediting_419985(91303581, -), CAediting_419986(91303595, -), CAediting_419987(91303649, -), CAediting_419988(91303666, -), CAediting_419989(91303672, -), CAediting_419990(91303678, -), CAediting_419991(91303680, -), CAediting_419992(91303690, -), CAediting_419993(91303715, -), CAediting_419994(91303732, -), CAediting_419995(91304062, -), CAediting_419996(91304107, -), CAediting_419997(91304108, -), CAediting_419998(91304109, -), CAediting_419999(91304120, -), CAediting_420000(91304135, -), CAediting_420001(91304148, -), CAediting_420002(91304156, -), CAediting_420003(91304161, -), CAediting_420004(91304162, -), CAediting_420005(91304175, -), CAediting_420006(91304211, -), CAediting_420007(91304226, -), CAediting_420008(91304265, -), CAediting_420009(91304274, -), CAediting_420010(91304293, -), CAediting_420011(91304295, -), CAediting_420012(91304296, -), CAediting_420013(91304318, -), CAediting_420014(91304913, -), CAediting_420015(91304988, -), CAediting_420016(91304997, -), CAediting_420017(91305001, -), CAediting_420018(91305004, -), CAediting_420019(91305008, -), CAediting_420020(91305009, -), CAediting_420021(91305014, -), CAediting_420022(91305023, -), CAediting_420023(91305027, -), CAediting_420024(91305033, -), CAediting_420025(91305050, -), CAediting_420026(91305105, -), CAediting_420027(91305120, -), CAediting_420028(91305184, -), CAediting_420029(91305207, -), CAediting_420030(91305416, -), CAediting_420031(91305429, -), CAediting_420032(91305433, -), CAediting_420033(91305434, -), CAediting_420034(91305447, -), CAediting_420035(91305499, -), CAediting_420036(91305503, -), CAediting_420037(91305511, -), CAediting_420038(91307841, -), CAediting_420039(91307843, -), CAediting_420040(91307849, -), CAediting_420041(91307855, -), CAediting_420042(91307856, -), CAediting_420043(91307857, -), CAediting_420044(91307867, -), CAediting_420045(91307868, -), CAediting_420046(91307869, -), CAediting_420047(91307889, -), CAediting_420048(91307892, -), CAediting_420049(91307893, -), CAediting_420050(91308291, -), CAediting_420051(91308297, -), CAediting_420052(91308299, -), CAediting_420053(91308316, -), CAediting_420054(91308345, -), CAediting_420055(91308355, -), CAediting_420056(91308358, -), CAediting_420057(91308366, -), CAediting_420058(91308367, -), CAediting_420059(91308372, -), CAediting_420060(91308397, -), CAediting_420061(91308401, -), CAediting_420062(91308406, -), CAediting_420063(91308407, -), CAediting_420064(91308429, -), CAediting_420065(91308433, -), CAediting_420066(91308436, -), CAediting_420067(91308437, -), CAediting_420068(91308463, -), CAediting_420069(91308483, -), CAediting_420070(91308488, -), CAediting_420071(91308507, -), CAediting_420072(91308542, -), CAediting_420073(91308543, -), CAediting_420074(91308559, -), CAediting_420075(91308562, -), CAediting_420076(91308848, -), CAediting_420077(91308851, -), CAediting_420078(91308853, -), CAediting_420079(91308858, -), CAediting_420080(91308859, -), CAediting_420081(91308871, -), CAediting_420082(91308883, -), CAediting_420083(91308898, -), CAediting_420084(91308911, -), CAediting_420085(91308915, -), CAediting_420086(91308919, -), CAediting_420087(91308924, -), CAediting_420088(91308925, -), CAediting_420089(91308951, -), CAediting_420090(91308960, -), CAediting_420091(91308980, -), CAediting_420092(91308986, -), CAediting_420093(91308988, -), CAediting_420094(91308990, -), CAediting_420095(91308991, -), CAediting_420096(91309003, -), CAediting_420097(91309005, -), CAediting_420098(91309011, -), CAediting_420099(91309019, -), CAediting_420100(91309024, -), CAediting_420101(91309051, -), CAediting_420102(91309054, -), CAediting_420103(91309059, -), CAediting_420104(91309060, -), CAediting_420105(91309066, -), CAediting_420106(91309082, -), CAediting_420107(91309516, -), CAediting_420108(91309546, -), CAediting_420109(91309549, -), CAediting_420110(91309557, -), CAediting_420111(91309578, -), CAediting_420112(91309591, -), CAediting_420113(91309604, -), CAediting_420114(91309612, -), CAediting_420115(91309635, -), CAediting_420116(91309651, -), CAediting_420117(91309653, -), CAediting_420118(91309658, -), CAediting_420119(91309659, -), CAediting_420120(91309667, -), CAediting_420121(91309686, -), CAediting_420122(91309701, -), CAediting_420123(91309702, -), CAediting_420124(91309710, -), CAediting_420125(91309726, -), CAediting_420126(91309730, -), CAediting_420127(91310099, -), CAediting_420128(91310101, -), CAediting_420129(91310107, -), CAediting_420130(91310115, -), CAediting_420131(91310136, -), CAediting_420132(91310137, -), CAediting_420133(91310152, -), CAediting_420134(91310153, -), CAediting_420135(91310154, -), CAediting_420136(91310164, -), CAediting_420137(91310166, -), CAediting_420138(91310178, -), CAediting_420139(91310190, -), CAediting_420140(91310204, -), CAediting_420141(91310210, -), CAediting_420142(91310211, -), CAediting_420143(91310215, -), CAediting_420144(91310219, -), CAediting_420145(91310224, -), CAediting_420146(91310256, -), CAediting_420147(91310268, -), CAediting_420148(91310275, -), CAediting_420149(91310280, -), CAediting_420150(91310285, -), CAediting_420151(91310287, -), CAediting_420152(91310290, -), CAediting_420153(91310291, -), CAediting_420154(91310311, -), CAediting_420155(91310331, -), CAediting_420156(91310333, -), CAediting_420157(91310335, -), CAediting_420158(91310565, -), CAediting_420159(91310597, -), CAediting_420160(91310641, -), CAediting_420161(91310659, -), CAediting_420162(91310686, -), CAediting_420163(91310691, -), CAediting_420164(91310715, -), CAediting_420165(91310720, -), CAediting_420166(91310721, -), CAediting_420167(91310729, -), CAediting_420168(91310752, -), CAediting_420169(91310761, -), CAediting_420170(91310762, -), CAediting_420171(91310780, -), CAediting_420172(91310785, -), CAediting_420173(91310788, -), CAediting_420174(91310791, -), CAediting_420175(91310792, -), CAediting_420176(91310794, -), CAediting_420177(91310795, -), CAediting_420178(91310797, -), CAediting_420179(91310800, -), CAediting_420180(91310812, -), CAediting_420181(91310827, -), CAediting_420182(91310828, -), CAediting_420183(91310852, -), CAediting_420184(91310862, -), CAediting_420185(91310874, -), CAediting_420186(91310875, -), CAediting_420187(91310897, -), CAediting_420188(91310898, -), CAediting_420189(91310906, -), CAediting_420190(91310919, -), CAediting_420191(91310934, -), CAediting_420192(91313539, -), CAediting_420193(91313594, -), CAediting_420194(91313616, -), CAediting_420195(91313645, -), CAediting_420196(91313661, -), CAediting_420197(91313671, -), CAediting_420198(91313683, -), CAediting_420199(91313696, -), CAediting_420200(91313720, -), CAediting_420201(91313777, -),

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RNA editing positional annotations for LUCAT1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_419971chr5_91303407_-ncRNA_intronic
CAediting_419972chr5_91303431_-ncRNA_intronic
CAediting_419973chr5_91303494_-ncRNA_intronic
CAediting_419974chr5_91303495_-ncRNA_intronic
CAediting_419975chr5_91303503_-ncRNA_intronic
CAediting_419976chr5_91303513_-ncRNA_intronic
CAediting_419977chr5_91303514_-ncRNA_intronic
CAediting_419978chr5_91303519_-ncRNA_intronic
CAediting_419979chr5_91303536_-ncRNA_intronic
CAediting_419980chr5_91303562_-ncRNA_intronic
CAediting_419981chr5_91303566_-ncRNA_intronic
CAediting_419982chr5_91303572_-ncRNA_intronic
CAediting_419983chr5_91303575_-ncRNA_intronic
CAediting_419984chr5_91303578_-ncRNA_intronic
CAediting_419985chr5_91303581_-ncRNA_intronic
CAediting_419986chr5_91303595_-ncRNA_intronic
CAediting_419987chr5_91303649_-ncRNA_intronic
CAediting_419988chr5_91303666_-ncRNA_intronic
CAediting_419989chr5_91303672_-ncRNA_intronic
CAediting_419990chr5_91303678_-ncRNA_intronic
CAediting_419991chr5_91303680_-ncRNA_intronic
CAediting_419992chr5_91303690_-ncRNA_intronic
CAediting_419993chr5_91303715_-ncRNA_intronic
CAediting_419994chr5_91303732_-ncRNA_intronic
CAediting_419995chr5_91304062_-ncRNA_intronic
CAediting_419996chr5_91304107_-ncRNA_intronic
CAediting_419997chr5_91304108_-ncRNA_intronic
CAediting_419998chr5_91304109_-ncRNA_intronic
CAediting_419999chr5_91304120_-ncRNA_intronic
CAediting_420000chr5_91304135_-ncRNA_intronic
CAediting_420001chr5_91304148_-ncRNA_intronic
CAediting_420002chr5_91304156_-ncRNA_intronic
CAediting_420003chr5_91304161_-ncRNA_intronic
CAediting_420004chr5_91304162_-ncRNA_intronic
CAediting_420005chr5_91304175_-ncRNA_intronic
CAediting_420006chr5_91304211_-ncRNA_intronic
CAediting_420007chr5_91304226_-ncRNA_intronic
CAediting_420008chr5_91304265_-ncRNA_intronic
CAediting_420009chr5_91304274_-ncRNA_intronic
CAediting_420010chr5_91304293_-ncRNA_intronic
CAediting_420011chr5_91304295_-ncRNA_intronic
CAediting_420012chr5_91304296_-ncRNA_intronic
CAediting_420013chr5_91304318_-ncRNA_intronic
CAediting_420014chr5_91304913_-ncRNA_intronic
CAediting_420015chr5_91304988_-ncRNA_intronic
CAediting_420016chr5_91304997_-ncRNA_intronic
CAediting_420017chr5_91305001_-ncRNA_intronic
CAediting_420018chr5_91305004_-ncRNA_intronic
CAediting_420019chr5_91305008_-ncRNA_intronic
CAediting_420020chr5_91305009_-ncRNA_intronic
CAediting_420021chr5_91305014_-ncRNA_intronic
CAediting_420022chr5_91305023_-ncRNA_intronic
CAediting_420023chr5_91305027_-ncRNA_intronic
CAediting_420024chr5_91305033_-ncRNA_intronic
CAediting_420025chr5_91305050_-ncRNA_intronic
CAediting_420026chr5_91305105_-ncRNA_intronic
CAediting_420027chr5_91305120_-ncRNA_intronic
CAediting_420028chr5_91305184_-ncRNA_intronic
CAediting_420029chr5_91305207_-ncRNA_intronic
CAediting_420030chr5_91305416_-ncRNA_intronic
CAediting_420031chr5_91305429_-ncRNA_intronic
CAediting_420032chr5_91305433_-ncRNA_intronic
CAediting_420033chr5_91305434_-ncRNA_intronic
CAediting_420034chr5_91305447_-ncRNA_intronic
CAediting_420035chr5_91305499_-ncRNA_intronic
CAediting_420036chr5_91305503_-ncRNA_intronic
CAediting_420037chr5_91305511_-ncRNA_intronic
CAediting_420038chr5_91307841_-ncRNA_intronic
CAediting_420039chr5_91307843_-ncRNA_intronic
CAediting_420040chr5_91307849_-ncRNA_intronic
CAediting_420041chr5_91307855_-ncRNA_intronic
CAediting_420042chr5_91307856_-ncRNA_intronic
CAediting_420043chr5_91307857_-ncRNA_intronic
CAediting_420044chr5_91307867_-ncRNA_intronic
CAediting_420045chr5_91307868_-ncRNA_intronic
CAediting_420046chr5_91307869_-ncRNA_intronic
CAediting_420047chr5_91307889_-ncRNA_intronic
CAediting_420048chr5_91307892_-ncRNA_intronic
CAediting_420049chr5_91307893_-ncRNA_intronic
CAediting_420050chr5_91308291_-ncRNA_intronic
CAediting_420051chr5_91308297_-ncRNA_intronic
CAediting_420052chr5_91308299_-ncRNA_intronic
CAediting_420053chr5_91308316_-ncRNA_intronic
CAediting_420054chr5_91308345_-ncRNA_intronic
CAediting_420055chr5_91308355_-ncRNA_intronic
CAediting_420056chr5_91308358_-ncRNA_intronic
CAediting_420057chr5_91308366_-ncRNA_intronic
CAediting_420058chr5_91308367_-ncRNA_intronic
CAediting_420059chr5_91308372_-ncRNA_intronic
CAediting_420060chr5_91308397_-ncRNA_intronic
CAediting_420061chr5_91308401_-ncRNA_intronic
CAediting_420062chr5_91308406_-ncRNA_intronic
CAediting_420063chr5_91308407_-ncRNA_intronic
CAediting_420064chr5_91308429_-ncRNA_intronic
CAediting_420065chr5_91308433_-ncRNA_intronic
CAediting_420066chr5_91308436_-ncRNA_intronic
CAediting_420067chr5_91308437_-ncRNA_intronic
CAediting_420068chr5_91308463_-ncRNA_intronic
CAediting_420069chr5_91308483_-ncRNA_intronic
CAediting_420070chr5_91308488_-ncRNA_intronic
CAediting_420071chr5_91308507_-ncRNA_intronic
CAediting_420072chr5_91308542_-ncRNA_intronic
CAediting_420073chr5_91308543_-ncRNA_intronic
CAediting_420074chr5_91308559_-ncRNA_intronic
CAediting_420075chr5_91308562_-ncRNA_intronic
CAediting_420076chr5_91308848_-ncRNA_intronic
CAediting_420077chr5_91308851_-ncRNA_intronic
CAediting_420078chr5_91308853_-ncRNA_intronic
CAediting_420079chr5_91308858_-ncRNA_intronic
CAediting_420080chr5_91308859_-ncRNA_intronic
CAediting_420081chr5_91308871_-ncRNA_intronic
CAediting_420082chr5_91308883_-ncRNA_intronic
CAediting_420083chr5_91308898_-ncRNA_intronic
CAediting_420084chr5_91308911_-ncRNA_intronic
CAediting_420085chr5_91308915_-ncRNA_intronic
CAediting_420086chr5_91308919_-ncRNA_intronic
CAediting_420087chr5_91308924_-ncRNA_intronic
CAediting_420088chr5_91308925_-ncRNA_intronic
CAediting_420089chr5_91308951_-ncRNA_intronic
CAediting_420090chr5_91308960_-ncRNA_intronic
CAediting_420091chr5_91308980_-ncRNA_intronic
CAediting_420092chr5_91308986_-ncRNA_intronic
CAediting_420093chr5_91308988_-ncRNA_intronic
CAediting_420094chr5_91308990_-ncRNA_intronic
CAediting_420095chr5_91308991_-ncRNA_intronic
CAediting_420096chr5_91309003_-ncRNA_intronic
CAediting_420097chr5_91309005_-ncRNA_intronic
CAediting_420098chr5_91309011_-ncRNA_intronic
CAediting_420099chr5_91309019_-ncRNA_intronic
CAediting_420100chr5_91309024_-ncRNA_intronic
CAediting_420101chr5_91309051_-ncRNA_intronic
CAediting_420102chr5_91309054_-ncRNA_intronic
CAediting_420103chr5_91309059_-ncRNA_intronic
CAediting_420104chr5_91309060_-ncRNA_intronic
CAediting_420105chr5_91309066_-ncRNA_intronic
CAediting_420106chr5_91309082_-ncRNA_intronic
CAediting_420107chr5_91309516_-ncRNA_intronic
CAediting_420108chr5_91309546_-ncRNA_intronic
CAediting_420109chr5_91309549_-ncRNA_intronic
CAediting_420110chr5_91309557_-ncRNA_intronic
CAediting_420111chr5_91309578_-ncRNA_intronic
CAediting_420112chr5_91309591_-ncRNA_intronic
CAediting_420113chr5_91309604_-ncRNA_intronic
CAediting_420114chr5_91309612_-ncRNA_intronic
CAediting_420115chr5_91309635_-ncRNA_intronic
CAediting_420116chr5_91309651_-ncRNA_intronic
CAediting_420117chr5_91309653_-ncRNA_intronic
CAediting_420118chr5_91309658_-ncRNA_intronic
CAediting_420119chr5_91309659_-ncRNA_intronic
CAediting_420120chr5_91309667_-ncRNA_intronic
CAediting_420121chr5_91309686_-ncRNA_intronic
CAediting_420122chr5_91309701_-ncRNA_intronic
CAediting_420123chr5_91309702_-ncRNA_intronic
CAediting_420124chr5_91309710_-ncRNA_intronic
CAediting_420125chr5_91309726_-ncRNA_intronic
CAediting_420126chr5_91309730_-ncRNA_intronic
CAediting_420127chr5_91310099_-ncRNA_intronic
CAediting_420128chr5_91310101_-ncRNA_intronic
CAediting_420129chr5_91310107_-ncRNA_intronic
CAediting_420130chr5_91310115_-ncRNA_intronic
CAediting_420131chr5_91310136_-ncRNA_intronic
CAediting_420132chr5_91310137_-ncRNA_intronic
CAediting_420133chr5_91310152_-ncRNA_intronic
CAediting_420134chr5_91310153_-ncRNA_intronic
CAediting_420135chr5_91310154_-ncRNA_intronic
CAediting_420136chr5_91310164_-ncRNA_intronic
CAediting_420137chr5_91310166_-ncRNA_intronic
CAediting_420138chr5_91310178_-ncRNA_intronic
CAediting_420139chr5_91310190_-ncRNA_intronic
CAediting_420140chr5_91310204_-ncRNA_intronic
CAediting_420141chr5_91310210_-ncRNA_intronic
CAediting_420142chr5_91310211_-ncRNA_intronic
CAediting_420143chr5_91310215_-ncRNA_intronic
CAediting_420144chr5_91310219_-ncRNA_intronic
CAediting_420145chr5_91310224_-ncRNA_intronic
CAediting_420146chr5_91310256_-ncRNA_intronic
CAediting_420147chr5_91310268_-ncRNA_intronic
CAediting_420148chr5_91310275_-ncRNA_intronic
CAediting_420149chr5_91310280_-ncRNA_intronic
CAediting_420150chr5_91310285_-ncRNA_intronic
CAediting_420151chr5_91310287_-ncRNA_intronic
CAediting_420152chr5_91310290_-ncRNA_intronic
CAediting_420153chr5_91310291_-ncRNA_intronic
CAediting_420154chr5_91310311_-ncRNA_intronic
CAediting_420155chr5_91310331_-ncRNA_intronic
CAediting_420156chr5_91310333_-ncRNA_intronic
CAediting_420157chr5_91310335_-ncRNA_intronic
CAediting_420158chr5_91310565_-ncRNA_intronic
CAediting_420159chr5_91310597_-ncRNA_intronic
CAediting_420160chr5_91310641_-ncRNA_intronic
CAediting_420161chr5_91310659_-ncRNA_intronic
CAediting_420162chr5_91310686_-ncRNA_intronic
CAediting_420163chr5_91310691_-ncRNA_intronic
CAediting_420164chr5_91310715_-ncRNA_intronic
CAediting_420165chr5_91310720_-ncRNA_intronic
CAediting_420166chr5_91310721_-ncRNA_intronic
CAediting_420167chr5_91310729_-ncRNA_intronic
CAediting_420168chr5_91310752_-ncRNA_intronic
CAediting_420169chr5_91310761_-ncRNA_intronic
CAediting_420170chr5_91310762_-ncRNA_intronic
CAediting_420171chr5_91310780_-ncRNA_intronic
CAediting_420172chr5_91310785_-ncRNA_intronic
CAediting_420173chr5_91310788_-ncRNA_intronic
CAediting_420174chr5_91310791_-ncRNA_intronic
CAediting_420175chr5_91310792_-ncRNA_intronic
CAediting_420176chr5_91310794_-ncRNA_intronic
CAediting_420177chr5_91310795_-ncRNA_intronic
CAediting_420178chr5_91310797_-ncRNA_intronic
CAediting_420179chr5_91310800_-ncRNA_intronic
CAediting_420180chr5_91310812_-ncRNA_intronic
CAediting_420181chr5_91310827_-ncRNA_intronic
CAediting_420182chr5_91310828_-ncRNA_intronic
CAediting_420183chr5_91310852_-ncRNA_intronic
CAediting_420184chr5_91310862_-ncRNA_intronic
CAediting_420185chr5_91310874_-ncRNA_intronic
CAediting_420186chr5_91310875_-ncRNA_intronic
CAediting_420187chr5_91310897_-ncRNA_intronic
CAediting_420188chr5_91310898_-ncRNA_intronic
CAediting_420189chr5_91310906_-ncRNA_intronic
CAediting_420190chr5_91310919_-ncRNA_intronic
CAediting_420191chr5_91310934_-ncRNA_intronic
CAediting_420192chr5_91313539_-ncRNA_intronic
CAediting_420193chr5_91313594_-ncRNA_intronic
CAediting_420194chr5_91313616_-ncRNA_intronic
CAediting_420195chr5_91313645_-ncRNA_exonic
CAediting_420196chr5_91313661_-ncRNA_exonic
CAediting_420197chr5_91313671_-ncRNA_exonic
CAediting_420198chr5_91313683_-ncRNA_exonic
CAediting_420199chr5_91313696_-ncRNA_exonic
CAediting_420200chr5_91313720_-ncRNA_exonic
CAediting_420201chr5_91313777_-ncRNA_exonic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_419971chr5_91303407_-SINEAluAluSz6
CAediting_419972chr5_91303431_-SINEAluAluSz6
CAediting_419973chr5_91303494_-SINEAluAluSz6
CAediting_419974chr5_91303495_-SINEAluAluSz6
CAediting_419975chr5_91303503_-SINEAluAluSz6
CAediting_419976chr5_91303513_-SINEAluAluSz6
CAediting_419977chr5_91303514_-SINEAluAluSz6
CAediting_419978chr5_91303519_-SINEAluAluSz6
CAediting_419979chr5_91303536_-SINEAluAluSz6
CAediting_419980chr5_91303562_-SINEAluAluSz6
CAediting_419981chr5_91303566_-SINEAluAluSz6
CAediting_419982chr5_91303572_-SINEAluAluSz6
CAediting_419983chr5_91303575_-SINEAluAluSz6
CAediting_419984chr5_91303578_-SINEAluAluSz6
CAediting_419985chr5_91303581_-SINEAluAluSz6
CAediting_419986chr5_91303595_-SINEAluAluSz6
CAediting_419987chr5_91303649_-SINEAluAluSz6
CAediting_419988chr5_91303666_-SINEAluAluSz6
CAediting_419989chr5_91303672_-SINEAluAluSz6
CAediting_419990chr5_91303678_-SINEAluAluSz6
CAediting_419991chr5_91303680_-SINEAluAluSz6
CAediting_419992chr5_91303690_-SINEAluAluSz6
CAediting_419995chr5_91304062_-SINEAluAluSq2
CAediting_419996chr5_91304107_-SINEAluAluSq2
CAediting_419997chr5_91304108_-SINEAluAluSq2
CAediting_419998chr5_91304109_-SINEAluAluSq2
CAediting_419999chr5_91304120_-SINEAluAluSq2
CAediting_420000chr5_91304135_-SINEAluAluSq2
CAediting_420001chr5_91304148_-SINEAluAluSq2
CAediting_420002chr5_91304156_-SINEAluAluSq2
CAediting_420003chr5_91304161_-SINEAluAluSq2
CAediting_420004chr5_91304162_-SINEAluAluSq2
CAediting_420005chr5_91304175_-SINEAluAluSq2
CAediting_420006chr5_91304211_-SINEAluAluSq2
CAediting_420007chr5_91304226_-SINEAluAluSq2
CAediting_420008chr5_91304265_-SINEAluAluSq2
CAediting_420009chr5_91304274_-SINEAluAluSq2
CAediting_420010chr5_91304293_-SINEAluAluSq2
CAediting_420011chr5_91304295_-SINEAluAluSq2
CAediting_420012chr5_91304296_-SINEAluAluSq2
CAediting_420013chr5_91304318_-SINEAluAluSq2
CAediting_420014chr5_91304913_-SINEAluAluSx
CAediting_420015chr5_91304988_-SINEAluAluSx
CAediting_420016chr5_91304997_-SINEAluAluSx
CAediting_420017chr5_91305001_-SINEAluAluSx
CAediting_420018chr5_91305004_-SINEAluAluSx
CAediting_420019chr5_91305008_-SINEAluAluSx
CAediting_420020chr5_91305009_-SINEAluAluSx
CAediting_420021chr5_91305014_-SINEAluAluSx
CAediting_420022chr5_91305023_-SINEAluAluSx
CAediting_420023chr5_91305027_-SINEAluAluSx
CAediting_420024chr5_91305033_-SINEAluAluSx
CAediting_420025chr5_91305050_-SINEAluAluSx
CAediting_420026chr5_91305105_-SINEAluAluSx
CAediting_420027chr5_91305120_-SINEAluAluSx
CAediting_420028chr5_91305184_-SINEAluAluSx
CAediting_420029chr5_91305207_-SINEAluAluSx
CAediting_420030chr5_91305416_-SINEAluAluJo
CAediting_420031chr5_91305429_-SINEAluAluJo
CAediting_420032chr5_91305433_-SINEAluAluJo
CAediting_420033chr5_91305434_-SINEAluAluJo
CAediting_420034chr5_91305447_-SINEAluAluJo
CAediting_420035chr5_91305499_-SINEAluAluJo
CAediting_420036chr5_91305503_-SINEAluAluJo
CAediting_420037chr5_91305511_-SINEAluAluJo
CAediting_420038chr5_91307841_-SINEAluAlu
CAediting_420039chr5_91307843_-SINEAluAlu
CAediting_420040chr5_91307849_-SINEAluAlu
CAediting_420041chr5_91307855_-SINEAluAlu
CAediting_420042chr5_91307856_-SINEAluAlu
CAediting_420043chr5_91307857_-SINEAluAlu
CAediting_420050chr5_91308291_-SINEAluAluSz
CAediting_420051chr5_91308297_-SINEAluAluSz
CAediting_420052chr5_91308299_-SINEAluAluSz
CAediting_420053chr5_91308316_-SINEAluAluSz
CAediting_420054chr5_91308345_-SINEAluAluSz
CAediting_420055chr5_91308355_-SINEAluAluSz
CAediting_420056chr5_91308358_-SINEAluAluSz
CAediting_420057chr5_91308366_-SINEAluAluSz
CAediting_420058chr5_91308367_-SINEAluAluSz
CAediting_420059chr5_91308372_-SINEAluAluSz
CAediting_420060chr5_91308397_-SINEAluAluSz
CAediting_420061chr5_91308401_-SINEAluAluSz
CAediting_420062chr5_91308406_-SINEAluAluSz
CAediting_420063chr5_91308407_-SINEAluAluSz
CAediting_420064chr5_91308429_-SINEAluAluSz
CAediting_420065chr5_91308433_-SINEAluAluSz
CAediting_420066chr5_91308436_-SINEAluAluSz
CAediting_420067chr5_91308437_-SINEAluAluSz
CAediting_420068chr5_91308463_-SINEAluAluSz
CAediting_420069chr5_91308483_-SINEAluAluSz
CAediting_420070chr5_91308488_-SINEAluAluSz
CAediting_420071chr5_91308507_-SINEAluAluSz
CAediting_420072chr5_91308542_-SINEAluAluSz
CAediting_420073chr5_91308543_-SINEAluAluSz
CAediting_420074chr5_91308559_-SINEAluAluSz
CAediting_420075chr5_91308562_-SINEAluAluSz
CAediting_420076chr5_91308848_-SINEAluAluSz
CAediting_420077chr5_91308851_-SINEAluAluSz
CAediting_420078chr5_91308853_-SINEAluAluSz
CAediting_420079chr5_91308858_-SINEAluAluSz
CAediting_420080chr5_91308859_-SINEAluAluSz
CAediting_420081chr5_91308871_-SINEAluAluSz
CAediting_420082chr5_91308883_-SINEAluAluSz
CAediting_420083chr5_91308898_-SINEAluAluSz
CAediting_420084chr5_91308911_-SINEAluAluSz
CAediting_420085chr5_91308915_-SINEAluAluSz
CAediting_420086chr5_91308919_-SINEAluAluSz
CAediting_420087chr5_91308924_-SINEAluAluSz
CAediting_420088chr5_91308925_-SINEAluAluSz
CAediting_420089chr5_91308951_-SINEAluAluSz
CAediting_420090chr5_91308960_-SINEAluAluSz
CAediting_420091chr5_91308980_-SINEAluAluSz
CAediting_420092chr5_91308986_-SINEAluAluSz
CAediting_420093chr5_91308988_-SINEAluAluSz
CAediting_420094chr5_91308990_-SINEAluAluSz
CAediting_420095chr5_91308991_-SINEAluAluSz
CAediting_420096chr5_91309003_-SINEAluAluSz
CAediting_420097chr5_91309005_-SINEAluAluSz
CAediting_420098chr5_91309011_-SINEAluAluSz
CAediting_420099chr5_91309019_-SINEAluAluSz
CAediting_420100chr5_91309024_-SINEAluAluSz
CAediting_420101chr5_91309051_-SINEAluAluSz
CAediting_420102chr5_91309054_-SINEAluAluSz
CAediting_420103chr5_91309059_-SINEAluAluSz
CAediting_420104chr5_91309060_-SINEAluAluSz
CAediting_420105chr5_91309066_-SINEAluAluSz
CAediting_420106chr5_91309082_-SINEAluAluSz
CAediting_420107chr5_91309516_-SINEAluAluJb
CAediting_420108chr5_91309546_-SINEAluAluJb
CAediting_420109chr5_91309549_-SINEAluAluJb
CAediting_420110chr5_91309557_-SINEAluAluJb
CAediting_420111chr5_91309578_-SINEAluAluJb
CAediting_420112chr5_91309591_-SINEAluAluJb
CAediting_420113chr5_91309604_-SINEAluAluJb
CAediting_420114chr5_91309612_-SINEAluAluJb
CAediting_420115chr5_91309635_-SINEAluFLAM_C
CAediting_420116chr5_91309651_-SINEAluFLAM_C
CAediting_420117chr5_91309653_-SINEAluFLAM_C
CAediting_420118chr5_91309658_-SINEAluFLAM_C
CAediting_420119chr5_91309659_-SINEAluFLAM_C
CAediting_420120chr5_91309667_-SINEAluFLAM_C
CAediting_420121chr5_91309686_-SINEAluFLAM_C
CAediting_420122chr5_91309701_-SINEAluFLAM_C
CAediting_420123chr5_91309702_-SINEAluFLAM_C
CAediting_420124chr5_91309710_-SINEAluFLAM_C
CAediting_420125chr5_91309726_-SINEAluFLAM_C
CAediting_420126chr5_91309730_-SINEAluFLAM_C
CAediting_420127chr5_91310099_-SINEAluAluJb
CAediting_420128chr5_91310101_-SINEAluAluJb
CAediting_420129chr5_91310107_-SINEAluAluJb
CAediting_420130chr5_91310115_-SINEAluAluJb
CAediting_420131chr5_91310136_-SINEAluAluJb
CAediting_420132chr5_91310137_-SINEAluAluJb
CAediting_420133chr5_91310152_-SINEAluAluJb
CAediting_420134chr5_91310153_-SINEAluAluJb
CAediting_420135chr5_91310154_-SINEAluAluJb
CAediting_420136chr5_91310164_-SINEAluAluJb
CAediting_420137chr5_91310166_-SINEAluAluJb
CAediting_420138chr5_91310178_-SINEAluAluJb
CAediting_420139chr5_91310190_-SINEAluAluJb
CAediting_420140chr5_91310204_-SINEAluAluJb
CAediting_420141chr5_91310210_-SINEAluAluJb
CAediting_420142chr5_91310211_-SINEAluAluJb
CAediting_420143chr5_91310215_-SINEAluAluJb
CAediting_420144chr5_91310219_-SINEAluAluJb
CAediting_420145chr5_91310224_-SINEAluAluJb
CAediting_420146chr5_91310256_-SINEAluAluJb
CAediting_420147chr5_91310268_-SINEAluAluJb
CAediting_420148chr5_91310275_-SINEAluAluJb
CAediting_420149chr5_91310280_-SINEAluAluJb
CAediting_420150chr5_91310285_-SINEAluAluJb
CAediting_420151chr5_91310287_-SINEAluAluJb
CAediting_420152chr5_91310290_-SINEAluAluJb
CAediting_420153chr5_91310291_-SINEAluAluJb
CAediting_420154chr5_91310311_-SINEAluAluJb
CAediting_420155chr5_91310331_-SINEAluAluJb
CAediting_420156chr5_91310333_-SINEAluAluJb
CAediting_420157chr5_91310335_-SINEAluAluJb
CAediting_420160chr5_91310641_-SINEAluAluSx
CAediting_420161chr5_91310659_-SINEAluAluSx
CAediting_420162chr5_91310686_-SINEAluAluSx
CAediting_420163chr5_91310691_-SINEAluAluSx
CAediting_420164chr5_91310715_-SINEAluAluSx
CAediting_420165chr5_91310720_-SINEAluAluSx
CAediting_420166chr5_91310721_-SINEAluAluSx
CAediting_420167chr5_91310729_-SINEAluAluSx
CAediting_420168chr5_91310752_-SINEAluAluSx
CAediting_420169chr5_91310761_-SINEAluAluSx
CAediting_420170chr5_91310762_-SINEAluAluSx
CAediting_420171chr5_91310780_-SINEAluAluSx
CAediting_420172chr5_91310785_-SINEAluAluSx
CAediting_420173chr5_91310788_-SINEAluAluSx
CAediting_420174chr5_91310791_-SINEAluAluSx
CAediting_420175chr5_91310792_-SINEAluAluSx
CAediting_420176chr5_91310794_-SINEAluAluSx
CAediting_420177chr5_91310795_-SINEAluAluSx
CAediting_420178chr5_91310797_-SINEAluAluSx
CAediting_420179chr5_91310800_-SINEAluAluSx
CAediting_420180chr5_91310812_-SINEAluAluSx
CAediting_420181chr5_91310827_-SINEAluAluSx
CAediting_420182chr5_91310828_-SINEAluAluSx
CAediting_420183chr5_91310852_-SINEAluAluSx
CAediting_420184chr5_91310862_-SINEAluAluSx
CAediting_420185chr5_91310874_-SINEAluAluSx
CAediting_420186chr5_91310875_-SINEAluAluSx
CAediting_420187chr5_91310897_-SINEAluAluSx
CAediting_420188chr5_91310898_-SINEAluAluSx
CAediting_420189chr5_91310906_-SINEAluAluSx
CAediting_420190chr5_91310919_-SINEAluAluSx
CAediting_420192chr5_91313539_-SINEAluAluY
CAediting_420193chr5_91313594_-SINEAluAluY
CAediting_420194chr5_91313616_-SINEAluAluY
CAediting_420195chr5_91313645_-SINEAluAluY
CAediting_420196chr5_91313661_-SINEAluAluY
CAediting_420197chr5_91313671_-SINEAluAluY
CAediting_420198chr5_91313683_-SINEAluAluY
CAediting_420199chr5_91313696_-SINEAluAluY
CAediting_420200chr5_91313720_-SINEAluAluY
CAediting_420201chr5_91313777_-SINEAluAluY

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RNA A-to-I editing events in the alternative splicing sites for LUCAT1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000248323.4.LUCAT1.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000248323.4.LUCAT1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for LUCAT1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for LUCAT1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for LUCAT1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for LUCAT1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000511918.4lincRNASoverviewSoverview
ENST00000513626.1lincRNASoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_420195ENST00000511918.4chr5_91313645_--228.60-226.10-231.20
CAediting_420196ENST00000511918.4chr5_91313661_--227.90-226.10-231.20
CAediting_420197ENST00000511918.4chr5_91313671_--228.00-226.10-231.20
CAediting_420198ENST00000511918.4chr5_91313683_--225.40-226.10-231.20
CAediting_420199ENST00000511918.4chr5_91313696_--228.60-226.10-231.20
CAediting_420200ENST00000511918.4chr5_91313720_--226.10-226.10-231.20
CAediting_420201ENST00000511918.4chr5_91313777_--225.20-226.10-231.20
CAediting_420195ENST00000513626.1chr5_91313645_--769.70-769.00-775.30
CAediting_420196ENST00000513626.1chr5_91313661_--770.80-769.00-775.30
CAediting_420197ENST00000513626.1chr5_91313671_--770.60-769.00-775.30
CAediting_420198ENST00000513626.1chr5_91313683_--768.30-769.00-775.30
CAediting_420199ENST00000513626.1chr5_91313696_--769.70-769.00-775.30
CAediting_420200ENST00000513626.1chr5_91313720_--769.00-769.00-775.30
CAediting_420201ENST00000513626.1chr5_91313777_--769.50-769.00-775.30

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Relation with ADAR for LUCAT1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
LUADCAediting_420040chr5_91307849_-0.002993823319132610.368122741501177....
THCACAediting_420062chr5_91308406_-....0.001743596933674840.372784824742668
LUADCAediting_420073chr5_91308543_-0.008247757687289520.2362609776983720.04847134166716540.17758715546503..
THCACAediting_420073chr5_91308543_-....0.0341173443095490.178578035277807
LUADCAediting_420074chr5_91308559_-0.01423890416037450.287771599514005....
LUADCAediting_420109chr5_91309549_-....0.01410331704244570.318024504275059
LUADCAediting_420128chr5_91310101_-5.38559995968699e-080.441334196048161....
LUADCAediting_420129chr5_91310107_-0.0004201892876853930.289128091503086....
LUSCCAediting_420129chr5_91310107_-0.0006818784081584840.359231624732779....
LUADCAediting_420150chr5_91310285_-0.002254154111078820.330801483250299....
LUADCAediting_420153chr5_91310291_-0.0004599881981689620.373855588898784....
KIRCCAediting_420153chr5_91310291_-0.04387475340418110.234981320181198....
THCACAediting_420155chr5_91310331_-0.003248063519532490.288747718294131....
KIRCCAediting_420157chr5_91310335_-0.04127094719406050.173979525660366....
LUADCAediting_420169chr5_91310761_-0.00639731620951240.286979133803507....
LUSCCAediting_420169chr5_91310761_-0.000148621616447840.470482900223737....
KIRCCAediting_420169chr5_91310761_-0.001948616776134230.318868314376376....

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Relation with cancer stages for LUCAT1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
KIRCpathologic_stageCAediting_420129chr5_91310107_-0.004949723218648240.246011997494503
KIRCpathologic_stageCAediting_420155chr5_91310331_-0.003912807081248520.244090716999853
LUADpathologic_stageCAediting_420157chr5_91310335_-0.02326652096323710.196680500590427

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Relation with survival for LUCAT1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for LUCAT1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for LUCAT1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource