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Editing gene: FGD5-AS1 (CAeditome ID:100505641)

Gene summary for FGD5-AS1

Gene summary

Gene information	Gene symbol	FGD5-AS1
	Gene ID	100505641
	Gene name	FGD5 antisense RNA 1
	Synonyms	-
	Cytomap	3p25.1
	Type of gene	ncRNA
	Description	FGD5 antisense RNA 1 (non-protein coding)
	Modification date	20210524
	UniProtAcc	.
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for FGD5-AS1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000225733.4

RNA A-to-I editing events in Cancer.

CAediting_259964(14944573, -), CAediting_259965(14944582, -), CAediting_259966(14944591, -), CAediting_259967(14944603, -), CAediting_259968(14944604, -), CAediting_259969(14944631, -), CAediting_259970(14944643, -), CAediting_259971(14944656, -), CAediting_259972(14944680, -), CAediting_259973(14944724, -), CAediting_259974(14944757, -), CAediting_259975(14944777, -), CAediting_259976(14944801, -), CAediting_259977(14944840, -), CAediting_259978(14944841, -), CAediting_259979(14944846, -), CAediting_259980(14944866, -), CAediting_259981(14944876, -), CAediting_259982(14944886, -), CAediting_259983(14944889, -), CAediting_259984(14944891, -), CAediting_259985(14944892, -), CAediting_259986(14944897, -), CAediting_259987(14944900, -), CAediting_259988(14944905, -), CAediting_259989(14944910, -), CAediting_259990(14944923, -), CAediting_259991(14944929, -), CAediting_259992(14944945, -), CAediting_259993(14944946, -), CAediting_259994(14944954, -), CAediting_259995(14945546, -), CAediting_259996(14945804, -),

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RNA editing positional annotations for FGD5-AS1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_259964	chr3_14944573_-	ncRNA_exonic
CAediting_259965	chr3_14944582_-	ncRNA_exonic
CAediting_259966	chr3_14944591_-	ncRNA_exonic
CAediting_259967	chr3_14944603_-	ncRNA_exonic
CAediting_259968	chr3_14944604_-	ncRNA_exonic
CAediting_259969	chr3_14944631_-	ncRNA_exonic
CAediting_259970	chr3_14944643_-	ncRNA_exonic
CAediting_259971	chr3_14944656_-	ncRNA_exonic
CAediting_259972	chr3_14944680_-	ncRNA_exonic
CAediting_259973	chr3_14944724_-	ncRNA_exonic
CAediting_259974	chr3_14944757_-	ncRNA_exonic
CAediting_259975	chr3_14944777_-	ncRNA_exonic
CAediting_259976	chr3_14944801_-	ncRNA_exonic
CAediting_259977	chr3_14944840_-	ncRNA_exonic
CAediting_259978	chr3_14944841_-	ncRNA_exonic
CAediting_259979	chr3_14944846_-	ncRNA_exonic
CAediting_259980	chr3_14944866_-	ncRNA_exonic
CAediting_259981	chr3_14944876_-	ncRNA_exonic
CAediting_259982	chr3_14944886_-	ncRNA_exonic
CAediting_259983	chr3_14944889_-	ncRNA_exonic
CAediting_259984	chr3_14944891_-	ncRNA_exonic
CAediting_259985	chr3_14944892_-	ncRNA_exonic
CAediting_259986	chr3_14944897_-	ncRNA_exonic
CAediting_259987	chr3_14944900_-	ncRNA_exonic
CAediting_259988	chr3_14944905_-	ncRNA_exonic
CAediting_259989	chr3_14944910_-	ncRNA_exonic
CAediting_259990	chr3_14944923_-	ncRNA_exonic
CAediting_259991	chr3_14944929_-	ncRNA_exonic
CAediting_259992	chr3_14944945_-	ncRNA_exonic
CAediting_259993	chr3_14944946_-	ncRNA_exonic
CAediting_259994	chr3_14944954_-	ncRNA_exonic
CAediting_259995	chr3_14945546_-	ncRNA_exonic
CAediting_259996	chr3_14945804_-	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_259964	chr3_14944573_-	SINE	Alu	AluSz6
CAediting_259965	chr3_14944582_-	SINE	Alu	AluSz6
CAediting_259966	chr3_14944591_-	SINE	Alu	AluSz6
CAediting_259967	chr3_14944603_-	SINE	Alu	AluSz6
CAediting_259968	chr3_14944604_-	SINE	Alu	AluSz6
CAediting_259969	chr3_14944631_-	SINE	Alu	AluSz6
CAediting_259970	chr3_14944643_-	SINE	Alu	AluSz6
CAediting_259971	chr3_14944656_-	SINE	Alu	AluSz6
CAediting_259972	chr3_14944680_-	SINE	Alu	AluSq2
CAediting_259973	chr3_14944724_-	SINE	Alu	AluSq2
CAediting_259974	chr3_14944757_-	SINE	Alu	AluSq2
CAediting_259975	chr3_14944777_-	SINE	Alu	AluSq2
CAediting_259976	chr3_14944801_-	SINE	Alu	AluSq2
CAediting_259977	chr3_14944840_-	SINE	Alu	AluSq2
CAediting_259978	chr3_14944841_-	SINE	Alu	AluSq2
CAediting_259979	chr3_14944846_-	SINE	Alu	AluSq2
CAediting_259980	chr3_14944866_-	SINE	Alu	AluSq2
CAediting_259981	chr3_14944876_-	SINE	Alu	AluSq2
CAediting_259982	chr3_14944886_-	SINE	Alu	AluSq2
CAediting_259983	chr3_14944889_-	SINE	Alu	AluSq2
CAediting_259984	chr3_14944891_-	SINE	Alu	AluSq2
CAediting_259985	chr3_14944892_-	SINE	Alu	AluSq2
CAediting_259986	chr3_14944897_-	SINE	Alu	AluSq2
CAediting_259987	chr3_14944900_-	SINE	Alu	AluSq2
CAediting_259988	chr3_14944905_-	SINE	Alu	AluSq2
CAediting_259989	chr3_14944910_-	SINE	Alu	AluSq2
CAediting_259990	chr3_14944923_-	SINE	Alu	AluSq2
CAediting_259991	chr3_14944929_-	SINE	Alu	AluSq2
CAediting_259992	chr3_14944945_-	SINE	Alu	AluSq2
CAediting_259993	chr3_14944946_-	SINE	Alu	AluSq2
CAediting_259994	chr3_14944954_-	SINE	Alu	AluSq2
CAediting_259995	chr3_14945546_-	DNA	TcMar-Mariner	HSMAR1
CAediting_259996	chr3_14945804_-	DNA	TcMar-Mariner	HSMAR1

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RNA A-to-I editing events in the alternative splicing sites for FGD5-AS1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000225733.4.FGD5-AS1.

Correlation between RNA A-to-I editing and PSI for ENSG00000225733.4.FGD5-AS1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for FGD5-AS1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

PRAD.CAediting_259966.ENSG00000225733.FGD5-AS1.png
Soverview

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Protein coding region RNA A-to-I editings for FGD5-AS1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for FGD5-AS1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_259964	chr3_14944573_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-1268a	14944570	14944576	7mer-m8	14944569	14944586	161	-26.06
CAediting_259964	chr3_14944573_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-1268b	14944570	14944576	7mer-m8	14944569	14944588	161	-28.04
CAediting_259965	chr3_14944582_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-662	14944581	14944586	6mer	14944580	14944602	141	-25.67
CAediting_259965	chr3_14944582_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-663b	14944577	14944583	7mer-m8	14944576	14944601	157	-33.42
CAediting_259967	chr3_14944603_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-3189-3p	14944602	14944608	7mer-m8	14944601	14944625	148	-24.33
CAediting_259967	chr3_14944603_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-6813-3p	14944601	14944607	7mer-m8	14944600	14944620	140	-13.75
CAediting_259968	chr3_14944604_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-3192-5p	14944603	14944610	8mer-1a	14944603	14944622	152	-24.23
CAediting_259968	chr3_14944604_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-326	14944602	14944608	7mer-m8	14944601	14944620	140	-14.14
CAediting_259968	chr3_14944604_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-330-5p	14944602	14944608	7mer-m8	14944601	14944622	140	-18.7
CAediting_259968	chr3_14944604_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-4314	14944603	14944609	7mer-m8	14944602	14944625	141	-22.02
CAediting_259968	chr3_14944604_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-514a-5p	14944601	14944607	7mer-m8	14944600	14944620	154	-20.77
CAediting_259970	chr3_14944643_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-28-5p	14944638	14944644	7mer-m8	14944637	14944657	151	-22.03
CAediting_259970	chr3_14944643_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-3139	14944638	14944644	7mer-m8	14944637	14944659	165	-26.52
CAediting_259970	chr3_14944643_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-708-5p	14944638	14944644	7mer-m8	14944637	14944658	150	-22.21
CAediting_259984	chr3_14944891_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-12113	14944891	14944897	7mer-m8	14944890	14944910	147	-19.86
CAediting_259984	chr3_14944891_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-4539	14944891	14944897	7mer-m8	14944890	14944909	151	-20
CAediting_259984	chr3_14944891_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-12113	14944891	14944897	7mer-m8	14944890	14944910	147	-19.86
CAediting_259984	chr3_14944891_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-4539	14944891	14944897	7mer-m8	14944890	14944909	151	-20
CAediting_259984	chr3_14944891_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-12113	14944891	14944897	7mer-m8	14944890	14944910	147	-19.86
CAediting_259984	chr3_14944891_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-4539	14944891	14944897	7mer-m8	14944890	14944909	151	-20
CAediting_259988	chr3_14944905_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-4726-3p	14944904	14944910	7mer-m8	14944903	14944926	149	-24.12
CAediting_259988	chr3_14944905_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-4726-3p	14944904	14944910	7mer-m8	14944903	14944926	149	-24.12
CAediting_259988	chr3_14944905_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-4726-3p	14944904	14944910	7mer-m8	14944903	14944926	149	-24.12
CAediting_259992	chr3_14944945_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-8052	14944940	14944946	7mer-1a	14944940	14944958	148	-29.06
CAediting_259992	chr3_14944945_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-8052	14944940	14944946	7mer-1a	14944940	14944958	148	-29.06
CAediting_259992	chr3_14944945_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-8052	14944940	14944946	7mer-1a	14944940	14944958	148	-29.06
CAediting_259993	chr3_14944946_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-513a-5p	14944945	14944951	7mer-m8	14944944	14944961	152	-17.32
CAediting_259993	chr3_14944946_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-638	14944940	14944946	7mer-1a	14944940	14944964	155	-34.38
CAediting_259993	chr3_14944946_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-513a-5p	14944945	14944951	7mer-m8	14944944	14944961	152	-17.32
CAediting_259993	chr3_14944946_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-638	14944940	14944946	7mer-1a	14944940	14944964	155	-34.38
CAediting_259993	chr3_14944946_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-513a-5p	14944945	14944951	7mer-m8	14944944	14944961	152	-17.32
CAediting_259993	chr3_14944946_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-638	14944940	14944946	7mer-1a	14944940	14944964	155	-34.38
CAediting_259994	chr3_14944954_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-3622a-5p	14944949	14944955	7mer-m8	14944948	14944969	151	-24.75
CAediting_259994	chr3_14944954_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-3622a-5p	14944949	14944955	7mer-m8	14944948	14944969	151	-24.75
CAediting_259994	chr3_14944954_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-3622a-5p	14944949	14944955	7mer-m8	14944948	14944969	151	-24.75
CAediting_259971	chr3_14944656_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-3940-3p	14944652	14944658	7mer-m8	14944651	14944674	151	-24.36
CAediting_259975	chr3_14944777_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-6845-3p	14944777	14944783	7mer-m8	14944776	14944796	147	-19.3
CAediting_259975	chr3_14944777_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-6845-3p	14944777	14944783	7mer-m8	14944776	14944796	147	-19.3
CAediting_259975	chr3_14944777_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-6845-3p	14944777	14944783	7mer-m8	14944776	14944796	147	-19.3
CAediting_259976	chr3_14944801_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-1207-3p	14944801	14944807	7mer-m8	14944800	14944817	140	-13.03
CAediting_259976	chr3_14944801_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-646	14944799	14944805	7mer-m8	14944798	14944816	145	-16.51
CAediting_259976	chr3_14944801_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-1207-3p	14944801	14944807	7mer-m8	14944800	14944817	140	-13.03
CAediting_259976	chr3_14944801_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-646	14944799	14944805	7mer-m8	14944798	14944816	145	-16.51
CAediting_259976	chr3_14944801_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-1207-3p	14944801	14944807	7mer-m8	14944800	14944817	140	-13.03
CAediting_259976	chr3_14944801_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-646	14944799	14944805	7mer-m8	14944798	14944816	145	-16.51
CAediting_259978	chr3_14944841_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-6844	14944839	14944846	8mer-1a	14944839	14944860	155	-9.08
CAediting_259978	chr3_14944841_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-6844	14944839	14944846	8mer-1a	14944839	14944860	155	-9.08
CAediting_259978	chr3_14944841_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-6844	14944839	14944846	8mer-1a	14944839	14944860	155	-9.08
CAediting_259979	chr3_14944846_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-153-5p	14944846	14944852	7mer-m8	14944845	14944867	148	-8.16
CAediting_259979	chr3_14944846_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-3680-3p	14944841	14944848	8mer-1a	14944841	14944863	140	-14.24
CAediting_259979	chr3_14944846_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-153-5p	14944846	14944852	7mer-m8	14944845	14944867	148	-8.16
CAediting_259979	chr3_14944846_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-3680-3p	14944841	14944848	8mer-1a	14944841	14944863	140	-14.24
CAediting_259979	chr3_14944846_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-153-5p	14944846	14944852	7mer-m8	14944845	14944867	148	-8.16
CAediting_259979	chr3_14944846_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-3680-3p	14944841	14944848	8mer-1a	14944841	14944863	140	-14.24
CAediting_259981	chr3_14944876_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-3146	14944873	14944879	7mer-m8	14944872	14944893	140	-18.27
CAediting_259981	chr3_14944876_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-449c-3p	14944874	14944880	7mer-m8	14944873	14944895	155	-12.96
CAediting_259981	chr3_14944876_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-8086	14944874	14944881	8mer-1a	14944874	14944894	157	-20.73
CAediting_259981	chr3_14944876_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-3146	14944873	14944879	7mer-m8	14944872	14944893	140	-18.27
CAediting_259981	chr3_14944876_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-449c-3p	14944874	14944880	7mer-m8	14944873	14944895	155	-12.96
CAediting_259981	chr3_14944876_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-8086	14944874	14944881	8mer-1a	14944874	14944894	157	-20.73
CAediting_259981	chr3_14944876_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-3146	14944873	14944879	7mer-m8	14944872	14944893	140	-18.27
CAediting_259981	chr3_14944876_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-449c-3p	14944874	14944880	7mer-m8	14944873	14944895	155	-12.96
CAediting_259981	chr3_14944876_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-8086	14944874	14944881	8mer-1a	14944874	14944894	157	-20.73
CAediting_259983	chr3_14944889_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-3176	14944885	14944891	7mer-m8	14944884	14944902	160	-23.34
CAediting_259983	chr3_14944889_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-3922-3p	14944885	14944891	7mer-m8	14944884	14944908	165	-28.17
CAediting_259983	chr3_14944889_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-3176	14944885	14944891	7mer-m8	14944884	14944902	160	-23.34
CAediting_259983	chr3_14944889_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-3922-3p	14944885	14944891	7mer-m8	14944884	14944908	165	-28.17
CAediting_259983	chr3_14944889_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-3176	14944885	14944891	7mer-m8	14944884	14944902	160	-23.34
CAediting_259983	chr3_14944889_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-3922-3p	14944885	14944891	7mer-m8	14944884	14944908	165	-28.17
CAediting_259986	chr3_14944897_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-4732-3p	14944897	14944903	7mer-m8	14944896	14944916	155	-20.69
CAediting_259986	chr3_14944897_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-4732-3p	14944897	14944903	7mer-m8	14944896	14944916	155	-20.69
CAediting_259986	chr3_14944897_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-4732-3p	14944897	14944903	7mer-m8	14944896	14944916	155	-20.69
CAediting_259996	chr3_14945804_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-1224-3p	14945799	14945805	7mer-m8	14945798	14945818	140	-12.68
CAediting_259996	chr3_14945804_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-3927-5p	14945803	14945809	7mer-m8	14945802	14945824	150	-14
CAediting_259996	chr3_14945804_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-1224-3p	14945799	14945805	7mer-m8	14945798	14945818	140	-12.68
CAediting_259996	chr3_14945804_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-3927-5p	14945803	14945809	7mer-m8	14945802	14945824	150	-14
CAediting_259996	chr3_14945804_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-1224-3p	14945799	14945805	7mer-m8	14945798	14945818	140	-12.68
CAediting_259996	chr3_14945804_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-3927-5p	14945803	14945809	7mer-m8	14945802	14945824	150	-14
CAediting_259996	chr3_14945804_-	ENSG00000225733.4	ENST00000440079.1	hsa-miR-1224-3p	14945799	14945805	7mer-m8	14945798	14945818	140	-12.68
CAediting_259996	chr3_14945804_-	ENSG00000225733.4	ENST00000440079.1	hsa-miR-3927-5p	14945803	14945809	7mer-m8	14945802	14945824	150	-14
CAediting_259974	chr3_14944757_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-1281	14944757	14944763	7mer-m8	14944756	14944772	141	-16.88
CAediting_259974	chr3_14944757_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-1281	14944757	14944763	7mer-m8	14944756	14944772	141	-16.88
CAediting_259974	chr3_14944757_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-1281	14944757	14944763	7mer-m8	14944756	14944772	141	-16.88
CAediting_259995	chr3_14945546_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-510-5p	14945545	14945550	6mer	14945544	14945565	142	-18.36
CAediting_259995	chr3_14945546_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-8083	14945542	14945547	6mer	14945541	14945562	141	-21.44
CAediting_259995	chr3_14945546_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-510-5p	14945545	14945550	6mer	14945544	14945565	142	-18.36
CAediting_259995	chr3_14945546_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-8083	14945542	14945547	6mer	14945541	14945562	141	-21.44
CAediting_259995	chr3_14945546_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-510-5p	14945545	14945550	6mer	14945544	14945565	142	-18.36
CAediting_259995	chr3_14945546_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-8083	14945542	14945547	6mer	14945541	14945562	141	-21.44
CAediting_259995	chr3_14945546_-	ENSG00000225733.4	ENST00000440079.1	hsa-miR-510-5p	14945545	14945550	6mer	14945544	14945565	142	-18.36
CAediting_259995	chr3_14945546_-	ENSG00000225733.4	ENST00000440079.1	hsa-miR-8083	14945542	14945547	6mer	14945541	14945562	141	-21.44

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_259992	chr3_14944945_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-10399-5p	14944944	14944950	7mer-m8	14944943	14944964	144	-10.26
CAediting_259993	chr3_14944946_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-10399-5p	14944944	14944950	7mer-m8	14944943	14944964	144	-10.26
CAediting_259989	chr3_14944910_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-125a-3p	14944905	14944912	8mer-1a	14944905	14944926	140	-15.95
CAediting_259980	chr3_14944866_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-2681-5p	14944866	14944872	7mer-m8	14944865	14944886	145	-16.8
CAediting_259973	chr3_14944724_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-454-3p	14944722	14944728	7mer-m8	14944721	14944742	152	-11.04
CAediting_259986	chr3_14944897_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-4680-5p	14944892	14944898	7mer-1a	14944892	14944912	146	-20.51
CAediting_259981	chr3_14944876_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-4716-5p	14944871	14944877	7mer-m8	14944870	14944891	140	-9.51
CAediting_259977	chr3_14944840_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-4775	14944835	14944841	7mer-m8	14944834	14944856	153	-7.86
CAediting_259974	chr3_14944757_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-5001-3p	14944755	14944761	7mer-m8	14944754	14944778	153	-19.7
CAediting_259982	chr3_14944886_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-6131	14944884	14944890	7mer-m8	14944883	14944901	140	-17.94
CAediting_259983	chr3_14944889_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-6131	14944884	14944890	7mer-m8	14944883	14944901	140	-17.94
CAediting_259974	chr3_14944757_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-6836-3p	14944757	14944763	7mer-m8	14944756	14944776	145	-17.69
CAediting_259992	chr3_14944945_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-10399-5p	14944944	14944950	7mer-m8	14944943	14944964	144	-10.26
CAediting_259993	chr3_14944946_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-10399-5p	14944944	14944950	7mer-m8	14944943	14944964	144	-10.26
CAediting_259973	chr3_14944724_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-106a-3p	14944724	14944730	7mer-m8	14944723	14944744	140	-8.51
CAediting_259973	chr3_14944724_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-122-5p	14944719	14944725	7mer-1a	14944719	14944737	147	-25.45
CAediting_259989	chr3_14944910_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-125a-3p	14944905	14944912	8mer-1a	14944905	14944926	140	-15.95
CAediting_259980	chr3_14944866_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-2681-5p	14944866	14944872	7mer-m8	14944865	14944886	145	-16.8
CAediting_259982	chr3_14944886_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-3663-5p	14944885	14944891	7mer-m8	14944884	14944900	141	-19.69
CAediting_259983	chr3_14944889_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-3663-5p	14944885	14944891	7mer-m8	14944884	14944900	141	-19.69
CAediting_259973	chr3_14944724_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-3666	14944722	14944728	7mer-m8	14944721	14944742	153	-17.29
CAediting_259965	chr3_14944582_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-4284	14944578	14944585	8mer-1a	14944578	14944595	143	-15.61
CAediting_259973	chr3_14944724_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-454-3p	14944722	14944728	7mer-m8	14944721	14944742	152	-11.04
CAediting_259986	chr3_14944897_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-4680-5p	14944892	14944898	7mer-1a	14944892	14944912	146	-20.51
CAediting_259981	chr3_14944876_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-4716-5p	14944871	14944877	7mer-m8	14944870	14944891	140	-9.51
CAediting_259977	chr3_14944840_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-4775	14944835	14944841	7mer-m8	14944834	14944856	153	-7.86
CAediting_259974	chr3_14944757_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-5001-3p	14944755	14944761	7mer-m8	14944754	14944778	153	-19.7
CAediting_259976	chr3_14944801_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-562	14944798	14944804	7mer-m8	14944797	14944814	154	-12.67
CAediting_259982	chr3_14944886_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-6131	14944884	14944890	7mer-m8	14944883	14944901	140	-17.94
CAediting_259983	chr3_14944889_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-6131	14944884	14944890	7mer-m8	14944883	14944901	140	-17.94
CAediting_259991	chr3_14944929_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-6734-3p	14944926	14944932	7mer-m8	14944925	14944947	144	-11.95
CAediting_259994	chr3_14944954_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-6807-5p	14944954	14944960	7mer-m8	14944953	14944974	140	-18.47
CAediting_259974	chr3_14944757_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-6836-3p	14944757	14944763	7mer-m8	14944756	14944776	145	-17.69
CAediting_259968	chr3_14944604_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-887-5p	14944603	14944610	8mer-1a	14944603	14944623	147	-15.68
CAediting_259992	chr3_14944945_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-10399-5p	14944944	14944950	7mer-m8	14944943	14944964	144	-10.26
CAediting_259993	chr3_14944946_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-10399-5p	14944944	14944950	7mer-m8	14944943	14944964	144	-10.26
CAediting_259989	chr3_14944910_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-125a-3p	14944905	14944912	8mer-1a	14944905	14944926	140	-15.95
CAediting_259980	chr3_14944866_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-2681-5p	14944866	14944872	7mer-m8	14944865	14944886	145	-16.8
CAediting_259973	chr3_14944724_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-454-3p	14944722	14944728	7mer-m8	14944721	14944742	152	-11.04
CAediting_259986	chr3_14944897_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-4680-5p	14944892	14944898	7mer-1a	14944892	14944912	146	-20.51
CAediting_259981	chr3_14944876_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-4716-5p	14944871	14944877	7mer-m8	14944870	14944891	140	-9.51
CAediting_259977	chr3_14944840_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-4775	14944835	14944841	7mer-m8	14944834	14944856	153	-7.86
CAediting_259974	chr3_14944757_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-5001-3p	14944755	14944761	7mer-m8	14944754	14944778	153	-19.7
CAediting_259982	chr3_14944886_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-6131	14944884	14944890	7mer-m8	14944883	14944901	140	-17.94
CAediting_259983	chr3_14944889_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-6131	14944884	14944890	7mer-m8	14944883	14944901	140	-17.94
CAediting_259991	chr3_14944929_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-6734-3p	14944926	14944932	7mer-m8	14944925	14944947	144	-11.95
CAediting_259988	chr3_14944905_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-6790-3p	14944900	14944906	7mer-1a	14944900	14944922	141	-26.53
CAediting_259974	chr3_14944757_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-6836-3p	14944757	14944763	7mer-m8	14944756	14944776	145	-17.69

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000225733.4	ENST00000417835.1	hsa-miR-200b-3p	14944935	14944941	7mer-m8	14944934	14944955	140	-10.87
CAediting_393	chr1_1167164_+	ENSG00000225733.4	ENST00000417835.1	hsa-miR-200b-3p	14945838	14945844	7mer-m8	14945837	14945861	155	-18.49
CAediting_1306324	chr19_13836464_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-27a-3p	14943510	14943516	7mer-m8	14943509	14943531	149	-17.52
CAediting_393	chr1_1167164_+	ENSG00000225733.4	ENST00000424349.1	hsa-miR-200b-3p	14944935	14944941	7mer-m8	14944934	14944955	140	-10.87
CAediting_393	chr1_1167164_+	ENSG00000225733.4	ENST00000424349.1	hsa-miR-200b-3p	14945838	14945844	7mer-m8	14945837	14945861	155	-18.49
CAediting_393	chr1_1167164_+	ENSG00000225733.4	ENST00000426200.1	hsa-miR-200b-3p	14944935	14944941	7mer-m8	14944934	14944955	140	-10.87
CAediting_393	chr1_1167164_+	ENSG00000225733.4	ENST00000426200.1	hsa-miR-200b-3p	14945838	14945844	7mer-m8	14945837	14945861	155	-18.49
CAediting_393	chr1_1167164_+	ENSG00000225733.4	ENST00000440079.1	hsa-miR-200b-3p	14945838	14945844	7mer-m8	14945837	14945861	155	-18.49
CAediting_1368054	chr19_46709310_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-320e	14945664	14945671	8mer-1a	14945664	14945684	150	-16.03
CAediting_1054808	chr15_66496985_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-4512	14947449	14947454	6mer	14947448	14947468	145	-33.64
CAediting_1229415	chr17_67471547_+	ENSG00000225733.4	ENST00000424349.1	hsa-miR-548aa	14944147	14944154	8mer-1a	14944147	14944171	150	-7.54
CAediting_1160181	chr17_7017644_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-195-3p	14944463	14944469	7mer-m8	14944462	14944483	140	-6.29
CAediting_1368054	chr19_46709310_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-320e	14945664	14945671	8mer-1a	14945664	14945684	150	-16.03
CAediting_86358	chr1_109598906_+	ENSG00000225733.4	ENST00000424349.1	hsa-miR-197-5p	14947225	14947231	7mer-m8	14947224	14947247	156	-29.1
CAediting_86358	chr1_109598906_+	ENSG00000225733.4	ENST00000424349.1	hsa-miR-197-5p	14943303	14943309	7mer-m8	14943302	14943327	162	-29.56
CAediting_77128	chr1_85133844_+	ENSG00000225733.4	ENST00000424349.1	hsa-miR-4423-3p	14943335	14943341	7mer-m8	14943334	14943354	140	-12.91
CAediting_396018	chr5_1062918_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-4635	14944629	14944635	7mer-m8	14944628	14944648	158	-21.85
CAediting_573001	chr7_92204086_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-1285-5p	14944297	14944303	7mer-m8	14944296	14944316	158	-19.03
CAediting_573001	chr7_92204086_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-1285-5p	14943324	14943330	7mer-m8	14943323	14943342	153	-19.8
CAediting_86358	chr1_109598906_+	ENSG00000225733.4	ENST00000430166.4	hsa-miR-197-5p	14948145	14948151	7mer-m8	14948144	14948165	169	-31.5
CAediting_396018	chr5_1062918_-	ENSG00000225733.4	ENST00000430166.4	hsa-miR-4635	14920438	14920444	7mer-m8	14920437	14920457	158	-20.29
CAediting_524911	chr7_5495852_-	ENSG00000225733.4	ENST00000430166.4	hsa-miR-589-3p	14924079	14924085	7mer-m8	14924078	14948017	145	-19.68
CAediting_524911	chr7_5495852_-	ENSG00000225733.4	ENST00000430166.4	hsa-miR-589-3p	14921414	14921420	7mer-m8	14921413	14921436	140	-11.54
CAediting_1368054	chr19_46709310_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-320e	14945664	14945671	8mer-1a	14945664	14945684	150	-16.03
CAediting_86358	chr1_109598906_+	ENSG00000225733.4	ENST00000426200.1	hsa-miR-197-5p	14948145	14948151	7mer-m8	14948144	14948165	169	-31.5
CAediting_1054808	chr15_66496985_-	ENSG00000225733.4	ENST00000440079.1	hsa-miR-4512	14947449	14947454	6mer	14947448	14947468	145	-33.64
CAediting_1368054	chr19_46709310_-	ENSG00000225733.4	ENST00000440079.1	hsa-miR-320e	14945664	14945671	8mer-1a	14945664	14945684	150	-16.03
CAediting_86358	chr1_109598906_+	ENSG00000225733.4	ENST00000440079.1	hsa-miR-197-5p	14947225	14947231	7mer-m8	14947224	14947247	156	-29.1
CAediting_1524209	chrX_134546392_-	ENSG00000225733.4	ENST00000417835.1	hsa-miR-503-5p	14945468	14945473	6mer	14945467	14945492	146	-23.5
CAediting_1524209	chrX_134546392_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-503-5p	14945468	14945473	6mer	14945467	14945492	146	-23.5
CAediting_1524209	chrX_134546392_-	ENSG00000225733.4	ENST00000426200.1	hsa-miR-503-5p	14945468	14945473	6mer	14945467	14945492	146	-23.5
CAediting_1524209	chrX_134546392_-	ENSG00000225733.4	ENST00000440079.1	hsa-miR-503-5p	14945468	14945473	6mer	14945467	14945492	146	-23.5

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_573000	chr7_92204081_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-1285-5p	14944335	14944342	8mer-1a	14944335	14944355	148	-16.3
CAediting_573001	chr7_92204086_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-1285-5p	14944335	14944342	8mer-1a	14944335	14944355	148	-16.3
CAediting_846604	chr11_93733708_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-1304-3p	14943330	14943336	7mer-m8	14943329	14943350	146	-15.47
CAediting_228905	chr2_188297554_+	ENSG00000225733.4	ENST00000424349.1	hsa-miR-561-3p	14942793	14942799	7mer-m8	14942792	14942817	147	-7.74
CAediting_524911	chr7_5495852_-	ENSG00000225733.4	ENST00000424349.1	hsa-miR-589-3p	14943247	14943253	7mer-m8	14943246	14943267	146	-12.49

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for FGD5-AS1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000424349.1	antisense
ENST00000417835.1	antisense
ENST00000426200.1	antisense
ENST00000440079.1	antisense

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_259964	ENST00000424349.1	chr3_14944573_-	-1194.90	-1191.10	-1188.20
CAediting_259965	ENST00000424349.1	chr3_14944582_-	-1190.20	-1191.10	-1188.20
CAediting_259966	ENST00000424349.1	chr3_14944591_-	-1191.10	-1191.10	-1188.20
CAediting_259967	ENST00000424349.1	chr3_14944603_-	-1190.70	-1191.10	-1188.20
CAediting_259968	ENST00000424349.1	chr3_14944604_-	-1191.20	-1191.10	-1188.20
CAediting_259969	ENST00000424349.1	chr3_14944631_-	-1190.40	-1191.10	-1188.20
CAediting_259970	ENST00000424349.1	chr3_14944643_-	-1191.10	-1191.10	-1188.20
CAediting_259971	ENST00000424349.1	chr3_14944656_-	-1190.40	-1191.10	-1188.20
CAediting_259972	ENST00000424349.1	chr3_14944680_-	-1191.10	-1191.10	-1188.20
CAediting_259973	ENST00000424349.1	chr3_14944724_-	-1191.10	-1191.10	-1188.20
CAediting_259974	ENST00000424349.1	chr3_14944757_-	-1190.40	-1191.10	-1188.20
CAediting_259975	ENST00000424349.1	chr3_14944777_-	-1190.30	-1191.10	-1188.20
CAediting_259976	ENST00000424349.1	chr3_14944801_-	-1190.10	-1191.10	-1188.20
CAediting_259977	ENST00000424349.1	chr3_14944840_-	-1191.10	-1191.10	-1188.20
CAediting_259978	ENST00000424349.1	chr3_14944841_-	-1191.10	-1191.10	-1188.20
CAediting_259979	ENST00000424349.1	chr3_14944846_-	-1191.10	-1191.10	-1188.20
CAediting_259980	ENST00000424349.1	chr3_14944866_-	-1191.40	-1191.10	-1188.20
CAediting_259981	ENST00000424349.1	chr3_14944876_-	-1191.10	-1191.10	-1188.20
CAediting_259982	ENST00000424349.1	chr3_14944886_-	-1190.40	-1191.10	-1188.20
CAediting_259983	ENST00000424349.1	chr3_14944889_-	-1190.50	-1191.10	-1188.20
CAediting_259984	ENST00000424349.1	chr3_14944891_-	-1191.00	-1191.10	-1188.20
CAediting_259985	ENST00000424349.1	chr3_14944892_-	-1197.10	-1191.10	-1188.20
CAediting_259986	ENST00000424349.1	chr3_14944897_-	-1190.20	-1191.10	-1188.20
CAediting_259987	ENST00000424349.1	chr3_14944900_-	-1190.40	-1191.10	-1188.20
CAediting_259988	ENST00000424349.1	chr3_14944905_-	-1190.20	-1191.10	-1188.20
CAediting_259989	ENST00000424349.1	chr3_14944910_-	-1190.70	-1191.10	-1188.20
CAediting_259990	ENST00000424349.1	chr3_14944923_-	-1191.10	-1191.10	-1188.20
CAediting_259991	ENST00000424349.1	chr3_14944929_-	-1191.10	-1191.10	-1188.20
CAediting_259992	ENST00000424349.1	chr3_14944945_-	-1191.10	-1191.10	-1188.20
CAediting_259993	ENST00000424349.1	chr3_14944946_-	-1191.20	-1191.10	-1188.20
CAediting_259994	ENST00000424349.1	chr3_14944954_-	-1187.70	-1191.10	-1188.20
CAediting_259995	ENST00000424349.1	chr3_14945546_-	-1192.90	-1191.10	-1188.20
CAediting_259996	ENST00000424349.1	chr3_14945804_-	-1191.10	-1191.10	-1188.20
CAediting_259972	ENST00000417835.1	chr3_14944680_-	-508.60	-508.60	-518.30
CAediting_259973	ENST00000417835.1	chr3_14944724_-	-508.20	-508.60	-518.30
CAediting_259974	ENST00000417835.1	chr3_14944757_-	-508.00	-508.60	-518.30
CAediting_259975	ENST00000417835.1	chr3_14944777_-	-508.60	-508.60	-518.30
CAediting_259976	ENST00000417835.1	chr3_14944801_-	-507.80	-508.60	-518.30
CAediting_259977	ENST00000417835.1	chr3_14944840_-	-510.30	-508.60	-518.30
CAediting_259978	ENST00000417835.1	chr3_14944841_-	-513.80	-508.60	-518.30
CAediting_259979	ENST00000417835.1	chr3_14944846_-	-509.60	-508.60	-518.30
CAediting_259980	ENST00000417835.1	chr3_14944866_-	-508.90	-508.60	-518.30
CAediting_259981	ENST00000417835.1	chr3_14944876_-	-509.00	-508.60	-518.30
CAediting_259982	ENST00000417835.1	chr3_14944886_-	-508.60	-508.60	-518.30
CAediting_259983	ENST00000417835.1	chr3_14944889_-	-508.10	-508.60	-518.30
CAediting_259984	ENST00000417835.1	chr3_14944891_-	-508.60	-508.60	-518.30
CAediting_259985	ENST00000417835.1	chr3_14944892_-	-508.60	-508.60	-518.30
CAediting_259986	ENST00000417835.1	chr3_14944897_-	-511.40	-508.60	-518.30
CAediting_259987	ENST00000417835.1	chr3_14944900_-	-507.90	-508.60	-518.30
CAediting_259988	ENST00000417835.1	chr3_14944905_-	-509.20	-508.60	-518.30
CAediting_259989	ENST00000417835.1	chr3_14944910_-	-508.90	-508.60	-518.30
CAediting_259990	ENST00000417835.1	chr3_14944923_-	-510.90	-508.60	-518.30
CAediting_259991	ENST00000417835.1	chr3_14944929_-	-507.40	-508.60	-518.30
CAediting_259992	ENST00000417835.1	chr3_14944945_-	-508.60	-508.60	-518.30
CAediting_259993	ENST00000417835.1	chr3_14944946_-	-508.60	-508.60	-518.30
CAediting_259994	ENST00000417835.1	chr3_14944954_-	-508.20	-508.60	-518.30
CAediting_259995	ENST00000417835.1	chr3_14945546_-	-510.40	-508.60	-518.30
CAediting_259996	ENST00000417835.1	chr3_14945804_-	-508.60	-508.60	-518.30
CAediting_259973	ENST00000426200.1	chr3_14944724_-	-630.50	-630.20	-644.30
CAediting_259974	ENST00000426200.1	chr3_14944757_-	-631.10	-630.20	-644.30
CAediting_259975	ENST00000426200.1	chr3_14944777_-	-629.00	-630.20	-644.30
CAediting_259976	ENST00000426200.1	chr3_14944801_-	-630.30	-630.20	-644.30
CAediting_259977	ENST00000426200.1	chr3_14944840_-	-631.80	-630.20	-644.30
CAediting_259978	ENST00000426200.1	chr3_14944841_-	-636.20	-630.20	-644.30
CAediting_259979	ENST00000426200.1	chr3_14944846_-	-632.00	-630.20	-644.30
CAediting_259980	ENST00000426200.1	chr3_14944866_-	-630.40	-630.20	-644.30
CAediting_259981	ENST00000426200.1	chr3_14944876_-	-630.60	-630.20	-644.30
CAediting_259982	ENST00000426200.1	chr3_14944886_-	-630.20	-630.20	-644.30
CAediting_259983	ENST00000426200.1	chr3_14944889_-	-629.70	-630.20	-644.30
CAediting_259984	ENST00000426200.1	chr3_14944891_-	-630.20	-630.20	-644.30
CAediting_259985	ENST00000426200.1	chr3_14944892_-	-630.20	-630.20	-644.30
CAediting_259986	ENST00000426200.1	chr3_14944897_-	-633.00	-630.20	-644.30
CAediting_259987	ENST00000426200.1	chr3_14944900_-	-629.50	-630.20	-644.30
CAediting_259988	ENST00000426200.1	chr3_14944905_-	-630.80	-630.20	-644.30
CAediting_259989	ENST00000426200.1	chr3_14944910_-	-630.50	-630.20	-644.30
CAediting_259990	ENST00000426200.1	chr3_14944923_-	-632.50	-630.20	-644.30
CAediting_259991	ENST00000426200.1	chr3_14944929_-	-629.00	-630.20	-644.30
CAediting_259992	ENST00000426200.1	chr3_14944945_-	-630.20	-630.20	-644.30
CAediting_259993	ENST00000426200.1	chr3_14944946_-	-630.20	-630.20	-644.30
CAediting_259994	ENST00000426200.1	chr3_14944954_-	-629.80	-630.20	-644.30
CAediting_259995	ENST00000426200.1	chr3_14945546_-	-632.00	-630.20	-644.30
CAediting_259996	ENST00000426200.1	chr3_14945804_-	-630.20	-630.20	-644.30
CAediting_259995	ENST00000440079.1	chr3_14945546_-	-501.80	-499.80	-501.80
CAediting_259996	ENST00000440079.1	chr3_14945804_-	-499.80	-499.80	-501.80

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Relation with ADAR for FGD5-AS1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LGG	CAediting_259964	chr3_14944573_-	6.72734532745913e-11	0.620763898207996	.	.	.	.
BRCA	CAediting_259964	chr3_14944573_-	8.7785476627006e-19	0.453281990301384	.	.	.	.
LIHC	CAediting_259964	chr3_14944573_-	0.000139600046432157	0.258658141224656	.	.	.	.
CESC	CAediting_259964	chr3_14944573_-	0.000237924187139142	0.434609368499553	.	.	.	.
LUAD	CAediting_259964	chr3_14944573_-	6.47829352020594e-11	0.458830536664429	.	.	.	.
LUSC	CAediting_259964	chr3_14944573_-	0.000339149711970491	0.344713627566933	.	.	.	.
HNSC	CAediting_259964	chr3_14944573_-	0.0390667875322964	0.21554423226277	.	.	.	.
STAD	CAediting_259964	chr3_14944573_-	0.00194160044195569	0.318972529627647	.	.	.	.
KIRC	CAediting_259964	chr3_14944573_-	0.0074965467097757	0.209372280914378	.	.	.	.
UCEC	CAediting_259964	chr3_14944573_-	.	.	0.0263461636947196	0.265465871482901	.	.
OV	CAediting_259964	chr3_14944573_-	1.20564059280162e-05	0.305495116827003	.	.	.	.
SKCM	CAediting_259964	chr3_14944573_-	0.00128042207339945	0.330762085645589	.	.	.	.
SARC	CAediting_259964	chr3_14944573_-	0.0015379445032886	0.393883306350899	.	.	.	.
BLCA	CAediting_259966	chr3_14944591_-	3.53287345074367e-24	0.514576691116693	1.04398402896463e-05	0.237548219869714	.	.
LGG	CAediting_259966	chr3_14944591_-	5.4763651817336e-21	0.39972488791507	.	.	.	.
BRCA	CAediting_259966	chr3_14944591_-	2.96374197977549e-86	0.55473081271043	.	.	.	.
LIHC	CAediting_259966	chr3_14944591_-	2.16320947998214e-06	0.262848654985624	.	.	.	.
CESC	CAediting_259966	chr3_14944591_-	4.8667893986257e-13	0.424863012992486	.	.	.	.
LUAD	CAediting_259966	chr3_14944591_-	9.21677058395395e-16	0.342545826103535	.	.	.	.
COAD	CAediting_259966	chr3_14944591_-	7.02019717975136e-24	0.519011270151235	0.000166404320799979	0.207066937599705	.	.
LUSC	CAediting_259966	chr3_14944591_-	1.91070657200186e-17	0.383332353877985	0.0118689772284707	0.117607654201457	.	.
GBM	CAediting_259966	chr3_14944591_-	1.37639910694962e-07	0.403122878274959	.	.	.	.
PRAD	CAediting_259966	chr3_14944591_-	5.83421854859054e-15	0.353189016261888	.	.	.	.
HNSC	CAediting_259966	chr3_14944591_-	1.08744292644708e-15	0.3627463468374	8.14323518306407e-05	0.183053162947309	.	.
STAD	CAediting_259966	chr3_14944591_-	3.35719338070949e-18	0.436753069777514	2.36582871590583e-06	0.245761967600039	.	.
THCA	CAediting_259966	chr3_14944591_-	2.99716247876982e-33	0.50138822301876	.	.	.	.
KIRC	CAediting_259966	chr3_14944591_-	7.63518238605395e-12	0.29531415145402	.	.	.	.
UCEC	CAediting_259966	chr3_14944591_-	3.85314716989734e-20	0.447818342231954	.	.	.	.
KIRP	CAediting_259966	chr3_14944591_-	7.72819587120403e-05	0.239493838527345	.	.	.	.
ACC	CAediting_259966	chr3_14944591_-	6.27498425888611e-06	0.581102616830881	0.0486516344665209	0.274807203669949	.	.
ESCA	CAediting_259966	chr3_14944591_-	1.50950457346511e-07	0.403114704203368	.	.	.	.
OV	CAediting_259966	chr3_14944591_-	5.35855626274716e-24	0.491863932522817	.	.	.	.
PAAD	CAediting_259966	chr3_14944591_-	2.97080739222367e-11	0.480311320029813	.	.	.	.
PCPG	CAediting_259966	chr3_14944591_-	1.03113068259334e-10	0.472231516168059	0.00302916623896199	0.227429203244745	.	.
SKCM	CAediting_259966	chr3_14944591_-	2.28531639661363e-37	0.563289573817661	.	.	.	.
UVM	CAediting_259966	chr3_14944591_-	1.75269563668304e-05	0.548537764073212	.	.	.	.
MESO	CAediting_259966	chr3_14944591_-	6.28404931465509e-06	0.473098797324062	.	.	.	.
READ	CAediting_259966	chr3_14944591_-	4.08266742343761e-05	0.384008968905349	.	.	.	.
SARC	CAediting_259966	chr3_14944591_-	1.48740347567541e-14	0.460108503441273	.	.	.	.
TGCT	CAediting_259966	chr3_14944591_-	3.64973984483219e-07	0.422591894442732	.	.	.	.
THYM	CAediting_259966	chr3_14944591_-	7.83966450665123e-08	0.543148271065216	0.00496519087247207	0.302030825265976	0.00320768288377463	0.316099081498723
BLCA	CAediting_259967	chr3_14944603_-	3.46090742482658e-33	0.56199914887167	0.000187315023668896	0.190005460809449	.	.
LGG	CAediting_259967	chr3_14944603_-	3.60315440136606e-19	0.377614318562139	.	.	.	.
BRCA	CAediting_259967	chr3_14944603_-	1.56003964304868e-89	0.558532831870077	.	.	.	.
LIHC	CAediting_259967	chr3_14944603_-	1.18079976717293e-06	0.280305833003048	.	.	.	.
CESC	CAediting_259967	chr3_14944603_-	3.45403855059743e-14	0.424941350909005	.	.	.	.
LUAD	CAediting_259967	chr3_14944603_-	7.6252488253976e-15	0.335046630095982	.	.	.	.
COAD	CAediting_259967	chr3_14944603_-	7.07894290596328e-38	0.564415260156907	0.000137183704972296	0.182032531517332	.	.
LUSC	CAediting_259967	chr3_14944603_-	1.96573291783793e-18	0.380883042146559	.	.	.	.
GBM	CAediting_259967	chr3_14944603_-	9.77432692795584e-07	0.369284462083252	.	.	.	.
PRAD	CAediting_259967	chr3_14944603_-	7.11881914774228e-27	0.460011889008459	.	.	.	.
HNSC	CAediting_259967	chr3_14944603_-	2.07520150566913e-22	0.429720642158253	0.0051269899418433	0.129322006764824	.	.
STAD	CAediting_259967	chr3_14944603_-	3.56855967525628e-17	0.418627914325802	0.0197556279023507	0.120980689475562	.	.
KICH	CAediting_259967	chr3_14944603_-	0.000249270278581524	0.445953431806076	.	.	.	.
THCA	CAediting_259967	chr3_14944603_-	3.39793342762988e-36	0.519590970752259	.	.	.	.
KIRC	CAediting_259967	chr3_14944603_-	1.92599254923854e-13	0.313850821801259	.	.	.	.
UCEC	CAediting_259967	chr3_14944603_-	1.12235594601881e-35	0.525254049313771	0.0342978190004608	0.0962323971896684	.	.
KIRP	CAediting_259967	chr3_14944603_-	7.74028820715688e-09	0.337603456268427	.	.	.	.
ACC	CAediting_259967	chr3_14944603_-	7.80403340594116e-06	0.499864274244596	.	.	.	.
ESCA	CAediting_259967	chr3_14944603_-	9.9163497980991e-09	0.431462696212946	.	.	.	.
LAML	CAediting_259967	chr3_14944603_-	0.011751700446815	0.226528579737862	.	.	.	.
OV	CAediting_259967	chr3_14944603_-	1.05089147848386e-19	0.44573999375545	.	.	.	.
PAAD	CAediting_259967	chr3_14944603_-	8.09589603663351e-11	0.466000311474138	.	.	.	.
PCPG	CAediting_259967	chr3_14944603_-	9.89488377502666e-16	0.562387536614007	0.0232343028180739	0.173006807159371	.	.
SKCM	CAediting_259967	chr3_14944603_-	1.78404987296845e-34	0.537635646494555	.	.	.	.
UCS	CAediting_259967	chr3_14944603_-	4.75141289931817e-07	0.643075940297895	.	.	.	.
UVM	CAediting_259967	chr3_14944603_-	0.0101939191526805	0.326630975016636	.	.	.	.
MESO	CAediting_259967	chr3_14944603_-	0.000292702274225947	0.389975708966438	.	.	.	.
READ	CAediting_259967	chr3_14944603_-	5.4733585922029e-09	0.449746368821721	.	.	.	.
SARC	CAediting_259967	chr3_14944603_-	6.58262794895573e-17	0.49226338139374	.	.	.	.
TGCT	CAediting_259967	chr3_14944603_-	6.25970955647606e-05	0.323962410430274	.	.	.	.
THYM	CAediting_259967	chr3_14944603_-	3.63873095243248e-06	0.452710053733501	0.0128146052385881	0.253183594048679	3.51017335687395e-05	0.409019054329744
BLCA	CAediting_259968	chr3_14944604_-	1.43957299276222e-09	0.372928200666273	.	.	.	.
LGG	CAediting_259968	chr3_14944604_-	3.38752358592299e-21	0.439769657256536	.	.	.	.
BRCA	CAediting_259968	chr3_14944604_-	7.66907674403653e-63	0.503051255533599	.	.	.	.
LIHC	CAediting_259968	chr3_14944604_-	1.60247519370818e-06	0.28462125736301	.	.	.	.
CESC	CAediting_259968	chr3_14944604_-	0.000422362645768553	0.236747989230063	.	.	.	.
LUAD	CAediting_259968	chr3_14944604_-	2.06080991067745e-10	0.289841339156095	.	.	.	.
COAD	CAediting_259968	chr3_14944604_-	5.17492605782221e-08	0.323909847952279	.	.	.	.
LUSC	CAediting_259968	chr3_14944604_-	8.91025740945657e-07	0.245193394357309	.	.	.	.
GBM	CAediting_259968	chr3_14944604_-	3.07448894642402e-09	0.450999203229126	.	.	.	.
PRAD	CAediting_259968	chr3_14944604_-	1.41264662403604e-07	0.285226909902316	.	.	.	.
HNSC	CAediting_259968	chr3_14944604_-	1.66473805403097e-08	0.288505565233932	.	.	.	.
STAD	CAediting_259968	chr3_14944604_-	2.2382370031189e-17	0.431821149376064	.	.	.	.
THCA	CAediting_259968	chr3_14944604_-	5.10034971594023e-15	0.359833807267364	.	.	.	.
KIRC	CAediting_259968	chr3_14944604_-	1.10824045034428e-07	0.239858031683109	.	.	.	.
UCEC	CAediting_259968	chr3_14944604_-	2.96615538275622e-08	0.297113564944626	.	.	.	.
KIRP	CAediting_259968	chr3_14944604_-	0.0227233193885253	0.15532341893306	.	.	.	.
ESCA	CAediting_259968	chr3_14944604_-	6.11580225192717e-12	0.509275009373106	.	.	.	.
OV	CAediting_259968	chr3_14944604_-	6.69478061933623e-24	0.49742850401176	.	.	.	.
PAAD	CAediting_259968	chr3_14944604_-	1.47636092371701e-05	0.346752019076301	.	.	.	.
PCPG	CAediting_259968	chr3_14944604_-	2.44815552474045e-10	0.510837723630729	.	.	.	.
SKCM	CAediting_259968	chr3_14944604_-	2.50633503962293e-17	0.435170911283351	.	.	.	.
MESO	CAediting_259968	chr3_14944604_-	0.000285006979758829	0.407493399954175	.	.	.	.
READ	CAediting_259968	chr3_14944604_-	0.0107853258064953	0.292834175245065	.	.	.	.
SARC	CAediting_259968	chr3_14944604_-	8.17399776757378e-09	0.397244169879453	.	.	.	.
THYM	CAediting_259968	chr3_14944604_-	0.00159036691585344	0.412317190091582	.	.	.	.
BLCA	CAediting_259969	chr3_14944631_-	2.30070401101334e-10	0.428126876864391	.	.	.	.
LGG	CAediting_259969	chr3_14944631_-	2.88354712785342e-21	0.526147433559017	.	.	.	.
BRCA	CAediting_259969	chr3_14944631_-	3.67616930509532e-59	0.534906093480739	.	.	.	.
LIHC	CAediting_259969	chr3_14944631_-	1.10460516905076e-07	0.284656374852614	.	.	.	.
CESC	CAediting_259969	chr3_14944631_-	3.27192009206722e-06	0.339757479602247	.	.	0.0402586116861094	0.153471099308846
LUAD	CAediting_259969	chr3_14944631_-	1.8338475387009e-22	0.444225862161671	.	.	.	.
COAD	CAediting_259969	chr3_14944631_-	8.05161424047508e-08	0.426371467030221	0.0214191750797748	0.190284411219548	.	.
LUSC	CAediting_259969	chr3_14944631_-	3.77367418150621e-14	0.427043474229074	.	.	.	.
GBM	CAediting_259969	chr3_14944631_-	2.21045587776773e-06	0.445015538488069	.	.	.	.
PRAD	CAediting_259969	chr3_14944631_-	7.07351453686181e-10	0.446961970626157	0.0116419283484576	0.191416861609557	.	.
HNSC	CAediting_259969	chr3_14944631_-	3.0259369478858e-07	0.290987366671914	.	.	.	.
STAD	CAediting_259969	chr3_14944631_-	5.02372587549324e-14	0.434921489556434	.	.	.	.
THCA	CAediting_259969	chr3_14944631_-	5.55519683377543e-11	0.389269216827624	.	.	.	.
KIRC	CAediting_259969	chr3_14944631_-	3.59627347155095e-10	0.289410984977453	.	.	.	.
UCEC	CAediting_259969	chr3_14944631_-	0.00219709113781407	0.220291391928316	.	.	.	.
ESCA	CAediting_259969	chr3_14944631_-	0.000643482246122895	0.317630280159801	.	.	.	.
OV	CAediting_259969	chr3_14944631_-	4.9242941521715e-11	0.382913840057009	.	.	.	.
PAAD	CAediting_259969	chr3_14944631_-	1.92839781731282e-06	0.415635528529171	.	.	.	.
PCPG	CAediting_259969	chr3_14944631_-	2.4177365417063e-08	0.467017983390353	.	.	.	.
SKCM	CAediting_259969	chr3_14944631_-	3.62424841076422e-16	0.477660530330582	.	.	.	.
MESO	CAediting_259969	chr3_14944631_-	8.21503774049282e-05	0.447177527248854	.	.	.	.
SARC	CAediting_259969	chr3_14944631_-	2.03605163982737e-12	0.529169641234724	.	.	.	.
TGCT	CAediting_259969	chr3_14944631_-	1.35167939903723e-09	0.580178595188015	.	.	.	.
LGG	CAediting_259970	chr3_14944643_-	4.3270712759707e-06	0.521522707998852	.	.	.	.
BRCA	CAediting_259970	chr3_14944643_-	3.32630272603716e-12	0.338067712763211	.	.	.	.
LIHC	CAediting_259970	chr3_14944643_-	2.43061249078044e-07	0.300070247553257	.	.	.	.
LUAD	CAediting_259970	chr3_14944643_-	1.14463020604573e-07	0.374060982567	.	.	.	.
LUSC	CAediting_259970	chr3_14944643_-	0.0228949018874547	0.232070112028799	.	.	.	.
STAD	CAediting_259970	chr3_14944643_-	9.94790488093546e-08	0.472197597477613	.	.	.	.
PCPG	CAediting_259970	chr3_14944643_-	0.0220007618328171	0.292847069155572	.	.	.	.
SKCM	CAediting_259970	chr3_14944643_-	0.0189337421809889	0.217636206120237	.	.	.	.
LIHC	CAediting_259971	chr3_14944656_-	8.3245799533122e-06	0.425369741506282	.	.	.	.
LIHC	CAediting_259984	chr3_14944891_-	7.590973201383e-05	0.406889289317987	.	.	.	.
LIHC	CAediting_259985	chr3_14944892_-	0.00128464232415118	0.334211038182101	.	.	.	.
COAD	CAediting_259985	chr3_14944892_-	0.0498747680767194	0.278857005111018	.	.	.	.
GBM	CAediting_259985	chr3_14944892_-	2.87639745684824e-07	0.471922442988692	.	.	.	.
STAD	CAediting_259985	chr3_14944892_-	5.11762156095722e-06	0.275455548657193	.	.	.	.
ESCA	CAediting_259985	chr3_14944892_-	1.18323682740942e-06	0.443985316418299	0.0341226985402834	0.202220528868682	.	.
OV	CAediting_259985	chr3_14944892_-	1.28164088068339e-10	0.362447924438462	.	.	.	.
BLCA	CAediting_259992	chr3_14944945_-	.	.	0.00510304369962095	0.237991977856133	.	.
LGG	CAediting_259992	chr3_14944945_-	1.55219176766006e-09	0.372942081481212	.	.	.	.
BRCA	CAediting_259992	chr3_14944945_-	4.99184528892636e-25	0.38879484289394	.	.	.	.
LIHC	CAediting_259992	chr3_14944945_-	0.00017897626261689	0.226122503462206	.	.	.	.
CESC	CAediting_259992	chr3_14944945_-	0.00648293364314939	0.245215019975928	.	.	.	.
LUAD	CAediting_259992	chr3_14944945_-	8.79078594275242e-13	0.375856252350514	.	.	.	.
LUSC	CAediting_259992	chr3_14944945_-	0.000144848338749097	0.256877232797957	.	.	0.0164928936044979	0.163762740735424
GBM	CAediting_259992	chr3_14944945_-	2.98683892211651e-07	0.439229135436893	.	.	.	.
HNSC	CAediting_259992	chr3_14944945_-	0.00897128588598692	0.177418763107109	.	.	.	.
STAD	CAediting_259992	chr3_14944945_-	6.3554030798758e-05	0.253140786530499	0.00706230412792085	0.172054323441074	.	.
THCA	CAediting_259992	chr3_14944945_-	0.000128026186337214	0.276468393973635	.	.	.	.
KIRC	CAediting_259992	chr3_14944945_-	0.00240118462603656	0.151374380566482	.	.	.	.
UCEC	CAediting_259992	chr3_14944945_-	0.0177497535031726	0.200848513094319	.	.	.	.
ESCA	CAediting_259992	chr3_14944945_-	4.37539675097333e-05	0.391274169470324	0.00329703904282571	0.286935591920486	.	.
OV	CAediting_259992	chr3_14944945_-	5.33861031243229e-11	0.38291587789913	.	.	.	.
SKCM	CAediting_259992	chr3_14944945_-	1.6226601411505e-05	0.299699482571109	.	.	.	.
MESO	CAediting_259992	chr3_14944945_-	9.48155339625326e-05	0.475272146340764	.	.	.	.
SARC	CAediting_259992	chr3_14944945_-	2.7363992418145e-05	0.386874175240221	.	.	.	.
BLCA	CAediting_259993	chr3_14944946_-	1.57625533596535e-11	0.42050319080699	.	.	.	.
LGG	CAediting_259993	chr3_14944946_-	3.31885138220832e-10	0.302100881460603	.	.	.	.
BRCA	CAediting_259993	chr3_14944946_-	1.7622486970786e-47	0.450082155419657	.	.	.	.
LIHC	CAediting_259993	chr3_14944946_-	7.98281588507516e-05	0.222147659182419	.	.	.	.
CESC	CAediting_259993	chr3_14944946_-	1.51230534635888e-06	0.334856400702987	.	.	0.0464866437607723	0.142033057481811
LUAD	CAediting_259993	chr3_14944946_-	3.33847792393471e-11	0.305905925298769	.	.	.	.
COAD	CAediting_259993	chr3_14944946_-	1.00722575457978e-06	0.340958659531844	0.00102873720873044	0.232728391189362	.	.
LUSC	CAediting_259993	chr3_14944946_-	6.9990911010738e-05	0.217746561976871	.	.	.	.
GBM	CAediting_259993	chr3_14944946_-	4.68359763192712e-05	0.323918646584569	.	.	.	.
PRAD	CAediting_259993	chr3_14944946_-	3.08168097519118e-06	0.271382907809558	.	.	.	.
HNSC	CAediting_259993	chr3_14944946_-	3.98206481547516e-05	0.22215877082137	.	.	.	.
STAD	CAediting_259993	chr3_14944946_-	1.77399843839178e-13	0.389041898856295	.	.	0.0211151551366843	0.126331948760081
THCA	CAediting_259993	chr3_14944946_-	4.32492524772e-09	0.296920491961168	.	.	.	.
KIRC	CAediting_259993	chr3_14944946_-	8.04481565891517e-06	0.198934088424633	.	.	.	.
UCEC	CAediting_259993	chr3_14944946_-	4.9204194815335e-10	0.358427439596767	0.0279498641889911	0.130444208878279	.	.
KIRP	CAediting_259993	chr3_14944946_-	0.00439898647865848	0.193971327419537	.	.	.	.
ESCA	CAediting_259993	chr3_14944946_-	5.33527353254747e-06	0.369006423978807	.	.	.	.
OV	CAediting_259993	chr3_14944946_-	1.99553104464646e-15	0.409012038148353	.	.	.	.
PAAD	CAediting_259993	chr3_14944946_-	0.00244732029315003	0.25148522703649	.	.	.	.
PCPG	CAediting_259993	chr3_14944946_-	0.0132920654171356	0.218330931787881	.	.	.	.
SKCM	CAediting_259993	chr3_14944946_-	2.05033213873358e-13	0.416295006343683	.	.	.	.
MESO	CAediting_259993	chr3_14944946_-	0.0123942944354702	0.283740666435412	.	.	.	.
READ	CAediting_259993	chr3_14944946_-	0.0331299335102838	0.301866145140429	.	.	.	.
SARC	CAediting_259993	chr3_14944946_-	5.86673664326183e-07	0.359334987166711	.	.	.	.
TGCT	CAediting_259993	chr3_14944946_-	1.84887280349167e-05	0.406551439741891	.	.	.	.
THYM	CAediting_259993	chr3_14944946_-	0.000125792009538276	0.490153794694761	.	.	.	.
LIHC	CAediting_259994	chr3_14944954_-	0.00169075411487411	0.301411035670668	.	.	.	.
LUAD	CAediting_259994	chr3_14944954_-	0.0363710175327455	0.250637369091047	.	.	.	.

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Relation with cancer stages for FGD5-AS1

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_259966	chr3_14944591_-	0.00146056707944587	0.17294892082576
BRCA	pathologic_stage	CAediting_259969	chr3_14944631_-	0.00340181623519792	0.105700901287217
HNSC	pathologic_stage	CAediting_259970	chr3_14944643_-	0.0459397162711484	0.205310698962763
KIRC	pathologic_stage	CAediting_259969	chr3_14944631_-	0.0200541548297527	0.109591708506461
KIRP	clinical_stage	CAediting_259967	chr3_14944603_-	0.00683453310492002	0.195108769827643
KIRP	clinical_stage	CAediting_259968	chr3_14944604_-	0.00178861147420023	0.259876521864509
KIRP	pathologic_stage	CAediting_259967	chr3_14944603_-	0.00671639842257361	0.171024878460611
KIRP	pathologic_stage	CAediting_259968	chr3_14944604_-	0.00357014046379242	0.207719015320164
PAAD	pathologic_stage	CAediting_259966	chr3_14944591_-	0.0288203397245493	0.168197379075227
THCA	pathologic_stage	CAediting_259966	chr3_14944591_-	0.00636867192355976	0.122469859255684
THCA	pathologic_stage	CAediting_259967	chr3_14944603_-	0.00507727697481858	0.125383850823168
THCA	pathologic_stage	CAediting_259968	chr3_14944604_-	0.0346715397656376	0.100838980878727
THCA	pathologic_stage	CAediting_259969	chr3_14944631_-	0.0311583187043091	0.133693843590359
UCEC	clinical_stage	CAediting_259966	chr3_14944591_-	0.0284497520339841	0.11241124223107

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Relation with survival for FGD5-AS1

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LGG	CAediting_259967	chr3_14944603_-	0.0315867302583454	0.00389535	6.48011
LGG	CAediting_259968	chr3_14944604_-	0.00984441986521156	0.000240785	33.6714
LGG	CAediting_259969	chr3_14944631_-	0.000215877329274416	0.0341398	17.6884
KIRC	CAediting_259969	chr3_14944631_-	0.0368532673256998	0.0378108	11.2446
UCEC	CAediting_259966	chr3_14944591_-	0.0207565984517633	0.00458364	12.9932
UCEC	CAediting_259967	chr3_14944603_-	0.00283549205556555	0.0176858	5.88372

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RelatedDrugs for FGD5-AS1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for FGD5-AS1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene