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Editing gene: ANKRD10-IT1 (CAeditome ID:100505494)

Gene summary for ANKRD10-IT1

Gene summary

Gene information	Gene symbol	ANKRD10-IT1
	Gene ID	100505494
	Gene name	ANKRD10 intronic transcript 1
	Synonyms	-
	Cytomap	13q34
	Type of gene	ncRNA
	Description	ANKRD10 intronic transcript 1 (non-protein coding)
	Modification date	20200902
	UniProtAcc	.
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for ANKRD10-IT1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000229152.2

RNA A-to-I editing events in Cancer.

CAediting_973217(110895303, -), CAediting_973218(110895325, -), CAediting_973219(110895328, -), CAediting_973220(110895337, -), CAediting_973221(110895338, -), CAediting_973222(110895339, -), CAediting_973223(110895356, -), CAediting_973224(110895365, -), CAediting_973225(110895370, -), CAediting_973226(110895378, -), CAediting_973227(110895379, -), CAediting_973228(110895380, -), CAediting_973229(110895390, -), CAediting_973230(110895395, -), CAediting_973231(110895396, -), CAediting_973232(110895403, -), CAediting_973233(110895415, -), CAediting_973234(110895417, -), CAediting_973235(110895426, -), CAediting_973236(110895435, -), CAediting_973237(110895436, -), CAediting_973238(110895449, -), CAediting_973239(110895452, -), CAediting_973240(110895459, -), CAediting_973241(110895465, -), CAediting_973242(110895472, -), CAediting_973243(110895475, -), CAediting_973244(110895478, -), CAediting_973245(110895479, -), CAediting_973246(110895487, -), CAediting_973247(110895500, -), CAediting_973248(110895505, -), CAediting_973249(110895511, -), CAediting_973250(110895530, -), CAediting_973251(110895540, -), CAediting_973252(110895549, -), CAediting_973253(110895554, -), CAediting_973254(110895579, -), CAediting_973255(110895581, -), CAediting_973256(110895583, -), CAediting_973257(110895585, -), CAediting_973258(110897162, -), CAediting_973259(110897198, -), CAediting_973260(110897199, -), CAediting_973261(110897234, -), CAediting_973262(110897237, -), CAediting_973263(110897238, -), CAediting_973264(110897243, -), CAediting_973265(110897249, -), CAediting_973266(110897256, -), CAediting_973267(110897260, -), CAediting_973268(110897274, -), CAediting_973269(110897279, -), CAediting_973270(110897298, -), CAediting_973271(110897342, -), CAediting_973272(110897356, -), CAediting_973273(110897367, -), CAediting_973274(110897374, -), CAediting_973275(110897380, -), CAediting_973276(110897396, -), CAediting_973277(110897405, -), CAediting_973278(110897484, -), CAediting_973279(110898587, -), CAediting_973280(110898607, -), CAediting_973281(110898627, -), CAediting_973282(110898635, -), CAediting_973283(110898642, -), CAediting_973284(110898656, -), CAediting_973285(110898670, -), CAediting_973286(110898675, -), CAediting_973287(110898681, -), CAediting_973288(110898687, -), CAediting_973289(110898688, -), CAediting_973290(110898697, -), CAediting_973291(110898701, -), CAediting_973292(110898705, -), CAediting_973293(110898717, -), CAediting_973294(110898729, -), CAediting_973295(110898748, -), CAediting_973296(110898790, -), CAediting_973297(110898818, -), CAediting_973298(110898821, -), CAediting_973299(110898823, -), CAediting_973300(110898828, -), CAediting_973301(110898839, -), CAediting_973302(110898852, -), CAediting_973303(110898861, -), CAediting_973304(110898862, -), CAediting_973305(110898864, -), CAediting_973306(110898867, -), CAediting_973307(110898870, -), CAediting_973308(110898871, -), CAediting_973309(110898877, -), CAediting_973310(110898884, -), CAediting_973311(110898888, -), CAediting_973312(110898891, -), CAediting_973313(110898893, -), CAediting_973314(110898894, -), CAediting_973315(110898920, -), CAediting_973316(110898923, -), CAediting_973317(110898924, -), CAediting_973318(110898925, -), CAediting_973319(110898926, -), CAediting_973320(110898927, -), CAediting_973321(110898928, -), CAediting_973322(110898930, -), CAediting_973323(110898932, -), CAediting_973324(110898933, -), CAediting_973325(110898934, -), CAediting_973326(110898935, -), CAediting_973327(110898936, -), CAediting_973328(110898939, -), CAediting_973329(110898950, -), CAediting_973330(110898951, -), CAediting_973331(110898960, -), CAediting_973332(110898970, -), CAediting_973333(110898973, -), CAediting_973334(110898976, -), CAediting_973335(110898984, -), CAediting_973336(110898989, -), CAediting_973337(110899007, -), CAediting_973338(110899013, -), CAediting_973339(110899021, -), CAediting_973340(110899024, -), CAediting_973341(110899029, -), CAediting_973342(110899030, -), CAediting_973343(110899050, -), CAediting_973344(110899067, -), CAediting_973345(110899069, -), CAediting_973346(110899087, -), CAediting_973347(110899088, -), CAediting_973348(110899089, -),

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RNA editing positional annotations for ANKRD10-IT1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_973217	chr13_110895303_-	ncRNA_exonic
CAediting_973218	chr13_110895325_-	ncRNA_intronic
CAediting_973219	chr13_110895328_-	ncRNA_intronic
CAediting_973220	chr13_110895337_-	ncRNA_intronic
CAediting_973221	chr13_110895338_-	ncRNA_intronic
CAediting_973222	chr13_110895339_-	ncRNA_intronic
CAediting_973223	chr13_110895356_-	ncRNA_intronic
CAediting_973224	chr13_110895365_-	ncRNA_intronic
CAediting_973225	chr13_110895370_-	ncRNA_intronic
CAediting_973226	chr13_110895378_-	ncRNA_intronic
CAediting_973227	chr13_110895379_-	ncRNA_intronic
CAediting_973228	chr13_110895380_-	ncRNA_intronic
CAediting_973229	chr13_110895390_-	ncRNA_intronic
CAediting_973230	chr13_110895395_-	ncRNA_intronic
CAediting_973231	chr13_110895396_-	ncRNA_intronic
CAediting_973232	chr13_110895403_-	ncRNA_intronic
CAediting_973233	chr13_110895415_-	ncRNA_intronic
CAediting_973234	chr13_110895417_-	ncRNA_intronic
CAediting_973235	chr13_110895426_-	ncRNA_intronic
CAediting_973236	chr13_110895435_-	ncRNA_intronic
CAediting_973237	chr13_110895436_-	ncRNA_intronic
CAediting_973238	chr13_110895449_-	ncRNA_intronic
CAediting_973239	chr13_110895452_-	ncRNA_intronic
CAediting_973240	chr13_110895459_-	ncRNA_intronic
CAediting_973241	chr13_110895465_-	ncRNA_intronic
CAediting_973242	chr13_110895472_-	ncRNA_intronic
CAediting_973243	chr13_110895475_-	ncRNA_intronic
CAediting_973244	chr13_110895478_-	ncRNA_intronic
CAediting_973245	chr13_110895479_-	ncRNA_intronic
CAediting_973246	chr13_110895487_-	ncRNA_intronic
CAediting_973247	chr13_110895500_-	ncRNA_intronic
CAediting_973248	chr13_110895505_-	ncRNA_intronic
CAediting_973249	chr13_110895511_-	ncRNA_intronic
CAediting_973250	chr13_110895530_-	ncRNA_intronic
CAediting_973251	chr13_110895540_-	ncRNA_intronic
CAediting_973252	chr13_110895549_-	ncRNA_intronic
CAediting_973253	chr13_110895554_-	ncRNA_intronic
CAediting_973254	chr13_110895579_-	ncRNA_intronic
CAediting_973255	chr13_110895581_-	ncRNA_intronic
CAediting_973256	chr13_110895583_-	ncRNA_intronic
CAediting_973257	chr13_110895585_-	ncRNA_intronic
CAediting_973258	chr13_110897162_-	ncRNA_intronic
CAediting_973259	chr13_110897198_-	ncRNA_intronic
CAediting_973260	chr13_110897199_-	ncRNA_intronic
CAediting_973261	chr13_110897234_-	ncRNA_intronic
CAediting_973262	chr13_110897237_-	ncRNA_intronic
CAediting_973263	chr13_110897238_-	ncRNA_intronic
CAediting_973264	chr13_110897243_-	ncRNA_intronic
CAediting_973265	chr13_110897249_-	ncRNA_intronic
CAediting_973266	chr13_110897256_-	ncRNA_intronic
CAediting_973267	chr13_110897260_-	ncRNA_intronic
CAediting_973268	chr13_110897274_-	ncRNA_intronic
CAediting_973269	chr13_110897279_-	ncRNA_intronic
CAediting_973270	chr13_110897298_-	ncRNA_intronic
CAediting_973271	chr13_110897342_-	ncRNA_intronic
CAediting_973272	chr13_110897356_-	ncRNA_intronic
CAediting_973273	chr13_110897367_-	ncRNA_intronic
CAediting_973274	chr13_110897374_-	ncRNA_intronic
CAediting_973275	chr13_110897380_-	ncRNA_intronic
CAediting_973276	chr13_110897396_-	ncRNA_intronic
CAediting_973277	chr13_110897405_-	ncRNA_intronic
CAediting_973278	chr13_110897484_-	ncRNA_intronic
CAediting_973279	chr13_110898587_-	ncRNA_intronic
CAediting_973280	chr13_110898607_-	ncRNA_intronic
CAediting_973281	chr13_110898627_-	ncRNA_intronic
CAediting_973282	chr13_110898635_-	ncRNA_intronic
CAediting_973283	chr13_110898642_-	ncRNA_intronic
CAediting_973284	chr13_110898656_-	ncRNA_intronic
CAediting_973285	chr13_110898670_-	ncRNA_intronic
CAediting_973286	chr13_110898675_-	ncRNA_intronic
CAediting_973287	chr13_110898681_-	ncRNA_intronic
CAediting_973288	chr13_110898687_-	ncRNA_intronic
CAediting_973289	chr13_110898688_-	ncRNA_intronic
CAediting_973290	chr13_110898697_-	ncRNA_intronic
CAediting_973291	chr13_110898701_-	ncRNA_intronic
CAediting_973292	chr13_110898705_-	ncRNA_intronic
CAediting_973293	chr13_110898717_-	ncRNA_intronic
CAediting_973294	chr13_110898729_-	ncRNA_intronic
CAediting_973295	chr13_110898748_-	ncRNA_intronic
CAediting_973296	chr13_110898790_-	ncRNA_intronic
CAediting_973297	chr13_110898818_-	ncRNA_intronic
CAediting_973298	chr13_110898821_-	ncRNA_intronic
CAediting_973299	chr13_110898823_-	ncRNA_intronic
CAediting_973300	chr13_110898828_-	ncRNA_intronic
CAediting_973301	chr13_110898839_-	ncRNA_intronic
CAediting_973302	chr13_110898852_-	ncRNA_intronic
CAediting_973303	chr13_110898861_-	ncRNA_intronic
CAediting_973304	chr13_110898862_-	ncRNA_intronic
CAediting_973305	chr13_110898864_-	ncRNA_intronic
CAediting_973306	chr13_110898867_-	ncRNA_intronic
CAediting_973307	chr13_110898870_-	ncRNA_intronic
CAediting_973308	chr13_110898871_-	ncRNA_intronic
CAediting_973309	chr13_110898877_-	ncRNA_intronic
CAediting_973310	chr13_110898884_-	ncRNA_intronic
CAediting_973311	chr13_110898888_-	ncRNA_intronic
CAediting_973312	chr13_110898891_-	ncRNA_intronic
CAediting_973313	chr13_110898893_-	ncRNA_intronic
CAediting_973314	chr13_110898894_-	ncRNA_intronic
CAediting_973315	chr13_110898920_-	ncRNA_intronic
CAediting_973316	chr13_110898923_-	ncRNA_intronic
CAediting_973317	chr13_110898924_-	ncRNA_intronic
CAediting_973318	chr13_110898925_-	ncRNA_intronic
CAediting_973319	chr13_110898926_-	ncRNA_intronic
CAediting_973320	chr13_110898927_-	ncRNA_intronic
CAediting_973321	chr13_110898928_-	ncRNA_intronic
CAediting_973322	chr13_110898930_-	ncRNA_intronic
CAediting_973323	chr13_110898932_-	ncRNA_intronic
CAediting_973324	chr13_110898933_-	ncRNA_intronic
CAediting_973325	chr13_110898934_-	ncRNA_intronic
CAediting_973326	chr13_110898935_-	ncRNA_intronic
CAediting_973327	chr13_110898936_-	ncRNA_intronic
CAediting_973328	chr13_110898939_-	ncRNA_intronic
CAediting_973329	chr13_110898950_-	ncRNA_intronic
CAediting_973330	chr13_110898951_-	ncRNA_intronic
CAediting_973331	chr13_110898960_-	ncRNA_intronic
CAediting_973332	chr13_110898970_-	ncRNA_intronic
CAediting_973333	chr13_110898973_-	ncRNA_intronic
CAediting_973334	chr13_110898976_-	ncRNA_intronic
CAediting_973335	chr13_110898984_-	ncRNA_intronic
CAediting_973336	chr13_110898989_-	ncRNA_intronic
CAediting_973337	chr13_110899007_-	ncRNA_intronic
CAediting_973338	chr13_110899013_-	ncRNA_intronic
CAediting_973339	chr13_110899021_-	ncRNA_intronic
CAediting_973340	chr13_110899024_-	ncRNA_intronic
CAediting_973341	chr13_110899029_-	ncRNA_intronic
CAediting_973342	chr13_110899030_-	ncRNA_intronic
CAediting_973343	chr13_110899050_-	ncRNA_intronic
CAediting_973344	chr13_110899067_-	ncRNA_exonic
CAediting_973345	chr13_110899069_-	ncRNA_exonic
CAediting_973346	chr13_110899087_-	ncRNA_exonic
CAediting_973347	chr13_110899088_-	ncRNA_exonic
CAediting_973348	chr13_110899089_-	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_973217	chr13_110895303_-	SINE	Alu	AluSx3
CAediting_973218	chr13_110895325_-	SINE	Alu	AluSx3
CAediting_973219	chr13_110895328_-	SINE	Alu	AluSx3
CAediting_973220	chr13_110895337_-	SINE	Alu	AluSx3
CAediting_973221	chr13_110895338_-	SINE	Alu	AluSx3
CAediting_973222	chr13_110895339_-	SINE	Alu	AluSx3
CAediting_973223	chr13_110895356_-	SINE	Alu	AluSx3
CAediting_973224	chr13_110895365_-	SINE	Alu	AluSx3
CAediting_973225	chr13_110895370_-	SINE	Alu	AluSx3
CAediting_973226	chr13_110895378_-	SINE	Alu	AluSx3
CAediting_973227	chr13_110895379_-	SINE	Alu	AluSx3
CAediting_973228	chr13_110895380_-	SINE	Alu	AluSx3
CAediting_973229	chr13_110895390_-	SINE	Alu	AluSx3
CAediting_973230	chr13_110895395_-	SINE	Alu	AluSx3
CAediting_973231	chr13_110895396_-	SINE	Alu	AluSx3
CAediting_973232	chr13_110895403_-	SINE	Alu	AluSx3
CAediting_973233	chr13_110895415_-	SINE	Alu	AluSx3
CAediting_973234	chr13_110895417_-	SINE	Alu	AluSx3
CAediting_973235	chr13_110895426_-	SINE	Alu	AluSx3
CAediting_973236	chr13_110895435_-	SINE	Alu	AluSx3
CAediting_973237	chr13_110895436_-	SINE	Alu	AluSx3
CAediting_973238	chr13_110895449_-	SINE	Alu	AluSx3
CAediting_973239	chr13_110895452_-	SINE	Alu	AluSx3
CAediting_973240	chr13_110895459_-	SINE	Alu	AluSx3
CAediting_973241	chr13_110895465_-	SINE	Alu	AluSx3
CAediting_973242	chr13_110895472_-	SINE	Alu	AluSx3
CAediting_973243	chr13_110895475_-	SINE	Alu	AluSx3
CAediting_973244	chr13_110895478_-	SINE	Alu	AluSx3
CAediting_973245	chr13_110895479_-	SINE	Alu	AluSx3
CAediting_973246	chr13_110895487_-	SINE	Alu	AluSx3
CAediting_973247	chr13_110895500_-	SINE	Alu	AluSx3
CAediting_973248	chr13_110895505_-	SINE	Alu	AluSx3
CAediting_973249	chr13_110895511_-	SINE	Alu	AluSx3
CAediting_973250	chr13_110895530_-	SINE	Alu	AluSx3
CAediting_973251	chr13_110895540_-	SINE	Alu	AluSx3
CAediting_973252	chr13_110895549_-	SINE	Alu	AluSx3
CAediting_973253	chr13_110895554_-	SINE	Alu	AluSx3
CAediting_973254	chr13_110895579_-	SINE	Alu	AluSx3
CAediting_973255	chr13_110895581_-	SINE	Alu	AluSx3
CAediting_973256	chr13_110895583_-	SINE	Alu	AluSx3
CAediting_973257	chr13_110895585_-	SINE	Alu	AluSx3
CAediting_973258	chr13_110897162_-	SINE	Alu	AluJr
CAediting_973259	chr13_110897198_-	SINE	Alu	AluJr
CAediting_973260	chr13_110897199_-	SINE	Alu	AluJr
CAediting_973261	chr13_110897234_-	SINE	Alu	AluJr
CAediting_973262	chr13_110897237_-	SINE	Alu	AluJr
CAediting_973263	chr13_110897238_-	SINE	Alu	AluJr
CAediting_973264	chr13_110897243_-	SINE	Alu	AluJr
CAediting_973265	chr13_110897249_-	SINE	Alu	AluJr
CAediting_973266	chr13_110897256_-	SINE	Alu	AluJr
CAediting_973267	chr13_110897260_-	SINE	Alu	AluJr
CAediting_973268	chr13_110897274_-	SINE	Alu	AluJr
CAediting_973269	chr13_110897279_-	SINE	Alu	AluJr
CAediting_973270	chr13_110897298_-	SINE	Alu	AluJr
CAediting_973271	chr13_110897342_-	SINE	Alu	AluJr
CAediting_973272	chr13_110897356_-	SINE	Alu	AluJr
CAediting_973273	chr13_110897367_-	SINE	Alu	AluJr
CAediting_973274	chr13_110897374_-	SINE	Alu	AluJr
CAediting_973275	chr13_110897380_-	SINE	Alu	AluJr
CAediting_973276	chr13_110897396_-	SINE	Alu	AluJr
CAediting_973277	chr13_110897405_-	SINE	Alu	AluJr
CAediting_973278	chr13_110897484_-	LINE	L1	L1MA5
CAediting_973279	chr13_110898587_-	SINE	Alu	AluJb
CAediting_973280	chr13_110898607_-	SINE	Alu	AluJb
CAediting_973281	chr13_110898627_-	SINE	Alu	AluJb
CAediting_973282	chr13_110898635_-	SINE	Alu	AluJb
CAediting_973283	chr13_110898642_-	SINE	Alu	AluJb
CAediting_973284	chr13_110898656_-	SINE	Alu	AluJb
CAediting_973285	chr13_110898670_-	SINE	Alu	AluJb
CAediting_973286	chr13_110898675_-	SINE	Alu	AluJb
CAediting_973287	chr13_110898681_-	SINE	Alu	AluJb
CAediting_973288	chr13_110898687_-	SINE	Alu	AluJb
CAediting_973289	chr13_110898688_-	SINE	Alu	AluJb
CAediting_973290	chr13_110898697_-	SINE	Alu	AluJb
CAediting_973291	chr13_110898701_-	SINE	Alu	AluJb
CAediting_973292	chr13_110898705_-	SINE	Alu	AluJb
CAediting_973293	chr13_110898717_-	SINE	Alu	AluJb
CAediting_973294	chr13_110898729_-	SINE	Alu	AluJb
CAediting_973295	chr13_110898748_-	SINE	Alu	AluSq2
CAediting_973296	chr13_110898790_-	SINE	Alu	AluSq2
CAediting_973297	chr13_110898818_-	SINE	Alu	AluSq2
CAediting_973298	chr13_110898821_-	SINE	Alu	AluSq2
CAediting_973299	chr13_110898823_-	SINE	Alu	AluSq2
CAediting_973300	chr13_110898828_-	SINE	Alu	AluSq2
CAediting_973301	chr13_110898839_-	SINE	Alu	AluSq2
CAediting_973302	chr13_110898852_-	SINE	Alu	AluSq2
CAediting_973303	chr13_110898861_-	SINE	Alu	AluSq2
CAediting_973304	chr13_110898862_-	SINE	Alu	AluSq2
CAediting_973305	chr13_110898864_-	SINE	Alu	AluSq2
CAediting_973306	chr13_110898867_-	SINE	Alu	AluSq2
CAediting_973307	chr13_110898870_-	SINE	Alu	AluSq2
CAediting_973308	chr13_110898871_-	SINE	Alu	AluSq2
CAediting_973309	chr13_110898877_-	SINE	Alu	AluSq2
CAediting_973310	chr13_110898884_-	SINE	Alu	AluSq2
CAediting_973311	chr13_110898888_-	SINE	Alu	AluSq2
CAediting_973312	chr13_110898891_-	SINE	Alu	AluSq2
CAediting_973313	chr13_110898893_-	SINE	Alu	AluSq2
CAediting_973314	chr13_110898894_-	SINE	Alu	AluSq2
CAediting_973315	chr13_110898920_-	SINE	Alu	AluSq2
CAediting_973316	chr13_110898923_-	SINE	Alu	AluSq2
CAediting_973317	chr13_110898924_-	SINE	Alu	AluSq2
CAediting_973318	chr13_110898925_-	SINE	Alu	AluSq2
CAediting_973319	chr13_110898926_-	SINE	Alu	AluSq2
CAediting_973320	chr13_110898927_-	SINE	Alu	AluSq2
CAediting_973321	chr13_110898928_-	SINE	Alu	AluSq2
CAediting_973322	chr13_110898930_-	SINE	Alu	AluSq2
CAediting_973323	chr13_110898932_-	SINE	Alu	AluSq2
CAediting_973324	chr13_110898933_-	SINE	Alu	AluSq2
CAediting_973325	chr13_110898934_-	SINE	Alu	AluSq2
CAediting_973326	chr13_110898935_-	SINE	Alu	AluSq2
CAediting_973327	chr13_110898936_-	SINE	Alu	AluSq2
CAediting_973328	chr13_110898939_-	SINE	Alu	AluSq2
CAediting_973329	chr13_110898950_-	SINE	Alu	AluSq2
CAediting_973330	chr13_110898951_-	SINE	Alu	AluSq2
CAediting_973331	chr13_110898960_-	SINE	Alu	AluSq2
CAediting_973332	chr13_110898970_-	SINE	Alu	AluSq2
CAediting_973333	chr13_110898973_-	SINE	Alu	AluSq2
CAediting_973334	chr13_110898976_-	SINE	Alu	AluSq2
CAediting_973335	chr13_110898984_-	SINE	Alu	AluSq2
CAediting_973336	chr13_110898989_-	SINE	Alu	AluSq2
CAediting_973337	chr13_110899007_-	SINE	Alu	AluSq2
CAediting_973338	chr13_110899013_-	SINE	Alu	AluSq2
CAediting_973339	chr13_110899021_-	SINE	Alu	AluSq2
CAediting_973340	chr13_110899024_-	SINE	Alu	AluSq2
CAediting_973341	chr13_110899029_-	SINE	Alu	AluSq2
CAediting_973342	chr13_110899030_-	SINE	Alu	AluSq2
CAediting_973343	chr13_110899050_-	SINE	Alu	AluSq2
CAediting_973344	chr13_110899067_-	SINE	Alu	AluJb
CAediting_973345	chr13_110899069_-	SINE	Alu	AluJb
CAediting_973346	chr13_110899087_-	SINE	Alu	AluJb
CAediting_973347	chr13_110899088_-	SINE	Alu	AluJb
CAediting_973348	chr13_110899089_-	SINE	Alu	AluJb

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RNA A-to-I editing events in the alternative splicing sites for ANKRD10-IT1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000229152.2.ANKRD10-IT1.

Correlation between RNA A-to-I editing and PSI for ENSG00000229152.2.ANKRD10-IT1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ANKRD10-IT1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ANKRD10-IT1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ANKRD10-IT1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_973344	chr13_110899067_-	ENSG00000229152.2	ENST00000426991.2	hsa-miR-3680-3p	110899062	110899069	8mer-1a	110899062	110899084	140	-13.11
CAediting_973346	chr13_110899087_-	ENSG00000229152.2	ENST00000426991.2	hsa-miR-6837-3p	110899087	110899093	7mer-m8	110899086	110899108	140	-12.37
CAediting_973347	chr13_110899088_-	ENSG00000229152.2	ENST00000426991.2	hsa-miR-1285-5p	110899086	110899092	7mer-m8	110899085	110899105	151	-22.87
CAediting_973347	chr13_110899088_-	ENSG00000229152.2	ENST00000426991.2	hsa-miR-4695-3p	110899085	110899091	7mer-m8	110899084	110899105	145	-14.46

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229413	chr17_67471544_+	ENSG00000229152.2	ENST00000426991.2	hsa-miR-548aa	110894674	110894680	7mer-m8	110894673	110894697	155	-13.36
CAediting_77128	chr1_85133844_+	ENSG00000229152.2	ENST00000426991.2	hsa-miR-4423-3p	110895303	110895309	7mer-m8	110895302	110899056	140	-14.45
CAediting_604450	chr7_133034877_-	ENSG00000229152.2	ENST00000426991.2	hsa-miR-3654	110894956	110894962	7mer-m8	110894955	110894973	140	-13.79

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_77128	chr1_85133844_+	ENSG00000229152.2	ENST00000426991.2	hsa-miR-4423-3p	110899127	110899133	7mer-m8	110899126	110899146	147	-13.38

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ANKRD10-IT1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for ANKRD10-IT1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_973224	chr13_110895365_-	0.00888916274555513	0.181431520460828	.	.	.	.
LGG	CAediting_973229	chr13_110895390_-	.	.	.	.	0.0491013536491543	0.201403893936352
LGG	CAediting_973235	chr13_110895426_-	.	.	.	.	0.021941628130698	0.190852754926918
THCA	CAediting_973235	chr13_110895426_-	0.000414203462434529	0.36058273814501	.	.	.	.
LGG	CAediting_973243	chr13_110895475_-	0.0196551513644416	0.291001992290089	.	.	.	.
BRCA	CAediting_973243	chr13_110895475_-	0.000394728527985986	0.282028858954284	.	.	.	.
BRCA	CAediting_973244	chr13_110895478_-	0.0012833378701921	0.248594881959302	.	.	.	.
BRCA	CAediting_973245	chr13_110895479_-	.	.	.	.	0.0373436477966448	0.213959493469635
BRCA	CAediting_973259	chr13_110897198_-	0.0254133836791603	0.127146987657768	.	.	.	.
LUAD	CAediting_973259	chr13_110897198_-	0.0184566750460582	0.266264566273412	.	.	.	.
KIRC	CAediting_973259	chr13_110897198_-	.	.	.	.	1.03596404607501e-08	0.623697017835533
PRAD	CAediting_973269	chr13_110897279_-	.	.	0.0069224474944909	0.269789797197582	.	.
ESCA	CAediting_973269	chr13_110897279_-	.	.	0.0125285515238098	0.310476295994385	.	.
PAAD	CAediting_973269	chr13_110897279_-	.	.	.	.	0.000921038571022906	0.420224765786365
SKCM	CAediting_973269	chr13_110897279_-	.	.	0.00497659871732989	0.269631505174959	.	.
BRCA	CAediting_973274	chr13_110897374_-	.	.	.	.	0.0084439257593678	0.246667314331756
BRCA	CAediting_973276	chr13_110897396_-	0.0363848705870485	0.186642311797923	.	.	.	.
ESCA	CAediting_973288	chr13_110898687_-	0.0164570064286248	0.211678225687358	.	.	.	.
LUAD	CAediting_973307	chr13_110898870_-	0.0491241967999656	0.248950630224925	.	.	.	.
OV	CAediting_973320	chr13_110898927_-	0.00353286149916877	0.196767983542431	.	.	.	.
LUAD	CAediting_973322	chr13_110898930_-	.	.	.	.	0.0435176954403129	0.270805279805428
LAML	CAediting_973322	chr13_110898930_-	.	.	.	.	0.0271971619124718	0.30931667880266
OV	CAediting_973334	chr13_110898976_-	0.0209732478782568	0.182968640111806	.	.	.	.
PRAD	CAediting_973339	chr13_110899021_-	.	.	0.00551386778129952	0.269055768553826	.	.
STAD	CAediting_973339	chr13_110899021_-	.	.	1.35898360934928e-05	0.352655586685542	.	.
ESCA	CAediting_973339	chr13_110899021_-	.	.	1.3356845289511e-05	0.501275534018538	.	.
SKCM	CAediting_973339	chr13_110899021_-	.	.	5.7574854395508e-06	0.536778961691482	.	.
BRCA	CAediting_973340	chr13_110899024_-	2.79555742827687e-14	0.314008661599178	.	.	.	.
LUAD	CAediting_973340	chr13_110899024_-	0.0012701355916412	0.226329630284677	.	.	.	.
LUSC	CAediting_973340	chr13_110899024_-	0.0019476518428607	0.349871020970488	.	.	.	.
PRAD	CAediting_973340	chr13_110899024_-	9.39696110549059e-05	0.271312519247657	4.80361287678386e-05	0.281937036650506	.	.
STAD	CAediting_973340	chr13_110899024_-	0.0119830995703231	0.155329063849958	1.09448624087794e-08	0.34453705321474	.	.
KIRC	CAediting_973340	chr13_110899024_-	0.0366494368066979	0.128199137213109	0.0470718005455626	0.121868001591201	.	.
KIRP	CAediting_973340	chr13_110899024_-	.	.	9.79023858460858e-06	0.518238664658671	.	.
ESCA	CAediting_973340	chr13_110899024_-	.	.	0.00155176129063892	0.266930138814072	.	.
LAML	CAediting_973340	chr13_110899024_-	0.0255604542427575	0.225528810474687	.	.	0.00308477834572629	0.295989605526338
SKCM	CAediting_973340	chr13_110899024_-	.	.	0.00146486746357818	0.28966374041432	.	.
BLCA	CAediting_973341	chr13_110899029_-	0.0145805499600048	0.275643317794346	.	.	.	.
LGG	CAediting_973341	chr13_110899029_-	4.97845924533271e-06	0.333757440737061	.	.	.	.
BRCA	CAediting_973341	chr13_110899029_-	2.77847852954801e-16	0.326881479779566	.	.	.	.
LUAD	CAediting_973341	chr13_110899029_-	4.46922369640219e-05	0.271551623465804	.	.	.	.
COAD	CAediting_973341	chr13_110899029_-	0.00166891624744693	0.330368822378253	.	.	.	.
PRAD	CAediting_973341	chr13_110899029_-	2.51035211201056e-05	0.308535446966068	.	.	.	.
STAD	CAediting_973341	chr13_110899029_-	0.00231332150603399	0.186398349097318	.	.	.	.
THCA	CAediting_973341	chr13_110899029_-	5.16816450900975e-07	0.429609788960137	.	.	.	.
KIRC	CAediting_973341	chr13_110899029_-	3.69422892322918e-06	0.28093769961722	.	.	.	.
UCEC	CAediting_973341	chr13_110899029_-	0.00713304537932482	0.358867350611604	.	.	.	.
KIRP	CAediting_973341	chr13_110899029_-	0.00459215964969219	0.380010993419701	.	.	.	.
LAML	CAediting_973341	chr13_110899029_-	.	.	.	.	0.0427411619594112	0.190976975729188
OV	CAediting_973341	chr13_110899029_-	9.85291493934867e-05	0.250759349122614	.	.	.	.
SKCM	CAediting_973341	chr13_110899029_-	1.69551325698706e-05	0.359754608246014	.	.	.	.

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Relation with cancer stages for ANKRD10-IT1

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_973234	chr13_110895417_-	0.0374640779508675	0.211604651246371
BRCA	pathologic_stage	CAediting_973244	chr13_110895478_-	0.0430993162903636	0.159634799243881
BRCA	pathologic_stage	CAediting_973290	chr13_110898697_-	0.0265934935591825	0.118363697804846
COAD	pathologic_stage	CAediting_973234	chr13_110895417_-	0.0106406214674642	-0.200815577535257
ESCA	clinical_stage	CAediting_973327	chr13_110898936_-	0.0368560918129488	-0.389295522812475
ESCA	pathologic_stage	CAediting_973325	chr13_110898934_-	0.0293699991836877	-0.30833347167118
ESCA	pathologic_stage	CAediting_973339	chr13_110899021_-	0.0168462991636984	-0.297811911349517
KIRP	pathologic_stage	CAediting_973341	chr13_110899029_-	0.0120373367326408	0.356070528343544
LUAD	pathologic_stage	CAediting_973235	chr13_110895426_-	0.0367445507810913	0.185554476976052
OV	clinical_stage	CAediting_973303	chr13_110898861_-	0.00302133734558833	0.247175386689648
OV	clinical_stage	CAediting_973341	chr13_110899029_-	0.033812652906522	0.138810000144763
PAAD	pathologic_stage	CAediting_973234	chr13_110895417_-	0.00536916834072953	-0.276429601783525
THCA	pathologic_stage	CAediting_973341	chr13_110899029_-	0.0124735760897771	0.223781251092895

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Relation with survival for ANKRD10-IT1

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LGG	CAediting_973269	chr13_110897279_-	0.016222123705693	0.0267396	0.0470237
BRCA	CAediting_973286	chr13_110898675_-	0.020747598565416	0.0292264	5737.53
LUSC	CAediting_973290	chr13_110898697_-	0.0336126622962473	0.0248968	19174.5
KIRC	CAediting_973288	chr13_110898687_-	0.0257447522700573	0.0100505	3570.43
KIRP	CAediting_973234	chr13_110895417_-	0.0111865410578589	0.0418857	705.43
OV	CAediting_973303	chr13_110898861_-	0.00349664665421612	0.0242602	15.1273

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RelatedDrugs for ANKRD10-IT1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ANKRD10-IT1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene