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Editing gene: RANBP9 (CAeditome ID:10048)

Gene summary for RANBP9

Gene summary

Gene information	Gene symbol	RANBP9
	Gene ID	10048
	Gene name	RAN binding protein 9
	Synonyms	BPM-L\|BPM90\|RANBPM\|RanBP7
	Cytomap	6p23
	Type of gene	protein-coding
	Description	ran-binding protein 9Ran Binding Protein in the Microtubule organizing centernovel centrosomal protein RanBPMran binding protein, centrosomalran-binding protein M
	Modification date	20210518
	UniProtAcc	Q96S59
	Context	- 30988811(RANBP9 suppresses tumor proliferation in colorectal cancer)

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
RANBP9	GO:0005634	Ran-binding protein 9	12220523
RANBP9	GO:0005634	Ran-binding protein 9	15381419
RANBP9	GO:0005634	Ran-binding protein 9	17467196
RANBP9	GO:0005654	Ran-binding protein 9	0000052
RANBP9	GO:0005737	Ran-binding protein 9	15381419
RANBP9	GO:0005737	Ran-binding protein 9	17467196
RANBP9	GO:0005737	Ran-binding protein 9	24143168
RANBP9	GO:0005829	Ran-binding protein 9	0000052
RANBP9	GO:0016604	Ran-binding protein 9	0000052
RANBP9	GO:0000151	Ran-binding protein 9	29911972

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RNA A-to-I events for RANBP9

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000010017.12

RNA A-to-I editing events in Cancer.

CAediting_459709(13633111, -), CAediting_459710(13633143, -), CAediting_459711(13633195, -), CAediting_459712(13633224, -), CAediting_459713(13633269, -), CAediting_459714(13633284, -), CAediting_459715(13638572, -), CAediting_459716(13638586, -), CAediting_459717(13638596, -), CAediting_459718(13639317, -), CAediting_459719(13639451, -), CAediting_459720(13639459, -), CAediting_459721(13646326, -), CAediting_459722(13646375, -), CAediting_459723(13646383, -), CAediting_459724(13646404, -), CAediting_459725(13646408, -), CAediting_459726(13646409, -), CAediting_459727(13648212, -), CAediting_459728(13648221, -), CAediting_459729(13648222, -), CAediting_459730(13648226, -), CAediting_459731(13648233, -), CAediting_459732(13648246, -), CAediting_459733(13648247, -), CAediting_459734(13648261, -), CAediting_459735(13648271, -), CAediting_459736(13648278, -), CAediting_459737(13648286, -), CAediting_459738(13648296, -), CAediting_459739(13648308, -), CAediting_459740(13648312, -), CAediting_459741(13648315, -), CAediting_459742(13648316, -), CAediting_459743(13648318, -), CAediting_459744(13648321, -), CAediting_459745(13648323, -), CAediting_459746(13648324, -), CAediting_459747(13648325, -), CAediting_459748(13648326, -), CAediting_459749(13648327, -), CAediting_459750(13648330, -), CAediting_459751(13648341, -), CAediting_459752(13648342, -), CAediting_459753(13648349, -), CAediting_459754(13648352, -), CAediting_459755(13648366, -), CAediting_459756(13648367, -), CAediting_459757(13648374, -), CAediting_459758(13648410, -), CAediting_459759(13648411, -), CAediting_459760(13648419, -), CAediting_459761(13650797, -), CAediting_459762(13650834, -), CAediting_459763(13650842, -), CAediting_459764(13650852, -), CAediting_459765(13650856, -), CAediting_459766(13650869, -), CAediting_459767(13650881, -), CAediting_459768(13650882, -), CAediting_459769(13650888, -), CAediting_459770(13650942, -), CAediting_459771(13650950, -), CAediting_459772(13651392, -), CAediting_459773(13651491, -), CAediting_459774(13651506, -), CAediting_459775(13651519, -), CAediting_459776(13651533, -), CAediting_459777(13651605, -), CAediting_459778(13651650, -), CAediting_459779(13651660, -), CAediting_459780(13651679, -), CAediting_459781(13666680, -), CAediting_459782(13666722, -), CAediting_459783(13666752, -), CAediting_459784(13666753, -), CAediting_459785(13669653, -), CAediting_459786(13669663, -), CAediting_459787(13669664, -), CAediting_459788(13669745, -), CAediting_459789(13669769, -), CAediting_459790(13669770, -), CAediting_459791(13669771, -), CAediting_459792(13669772, -), CAediting_459793(13669796, -), CAediting_459794(13669867, -), CAediting_459795(13670200, -), CAediting_459796(13674032, -), CAediting_459797(13677861, -), CAediting_459798(13677900, -), CAediting_459799(13677915, -), CAediting_459800(13677963, -), CAediting_459801(13677971, -), CAediting_459802(13682135, -), CAediting_459803(13682520, -), CAediting_459804(13685457, -), CAediting_459805(13685490, -), CAediting_459806(13685673, -), CAediting_459807(13685685, -), CAediting_459808(13685686, -), CAediting_459809(13685845, -), CAediting_459810(13685848, -), CAediting_459811(13685849, -), CAediting_459812(13685855, -), CAediting_459813(13685885, -), CAediting_459814(13686147, -), CAediting_459815(13686197, -), CAediting_459816(13686202, -), CAediting_459817(13686212, -), CAediting_459818(13686220, -), CAediting_459819(13686228, -), CAediting_459820(13686397, -), CAediting_459821(13686557, -), CAediting_459822(13686659, -), CAediting_459823(13686699, -), CAediting_459824(13687388, -), CAediting_459825(13687436, -), CAediting_459826(13687474, -), CAediting_459827(13688887, -), CAediting_459828(13688890, -), CAediting_459829(13688908, -), CAediting_459830(13688909, -), CAediting_459831(13688925, -), CAediting_459832(13688929, -), CAediting_459833(13689052, -), CAediting_459834(13689121, -), CAediting_459835(13689135, -), CAediting_459836(13689275, -), CAediting_459837(13689323, -), CAediting_459838(13689331, -), CAediting_459839(13689333, -), CAediting_459840(13689338, -), CAediting_459841(13689347, -), CAediting_459842(13689355, -), CAediting_459843(13689363, -), CAediting_459844(13689367, -), CAediting_459845(13689368, -), CAediting_459846(13689376, -), CAediting_459847(13689379, -), CAediting_459848(13689382, -), CAediting_459849(13689386, -), CAediting_459850(13689387, -), CAediting_459851(13689391, -), CAediting_459852(13689409, -), CAediting_459853(13689419, -), CAediting_459854(13689435, -), CAediting_459855(13689439, -), CAediting_459856(13689447, -), CAediting_459857(13689471, -), CAediting_459858(13689477, -), CAediting_459859(13689487, -), CAediting_459860(13689500, -), CAediting_459861(13689501, -), CAediting_459862(13689506, -), CAediting_459863(13689511, -), CAediting_459864(13689534, -), CAediting_459865(13689540, -), CAediting_459866(13689546, -), CAediting_459867(13689568, -), CAediting_459868(13689976, -), CAediting_459869(13690975, -), CAediting_459870(13691010, -), CAediting_459871(13691023, -), CAediting_459872(13691068, -), CAediting_459873(13691082, -), CAediting_459874(13691085, -), CAediting_459875(13691086, -), CAediting_459876(13691708, -), CAediting_459877(13691763, -), CAediting_459878(13691949, -), CAediting_459879(13706232, -), CAediting_459880(13706878, -), CAediting_459881(13706880, -), CAediting_459882(13707218, -), CAediting_459883(13707270, -),

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RNA editing positional annotations for RANBP9 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_459709	chr6_13633111_-	intronic
CAediting_459710	chr6_13633143_-	intronic
CAediting_459711	chr6_13633195_-	intronic
CAediting_459712	chr6_13633224_-	intronic
CAediting_459713	chr6_13633269_-	intronic
CAediting_459714	chr6_13633284_-	intronic
CAediting_459715	chr6_13638572_-	intronic
CAediting_459716	chr6_13638586_-	intronic
CAediting_459717	chr6_13638596_-	intronic
CAediting_459718	chr6_13639317_-	intronic
CAediting_459719	chr6_13639451_-	intronic
CAediting_459720	chr6_13639459_-	intronic
CAediting_459721	chr6_13646326_-	intronic
CAediting_459722	chr6_13646375_-	intronic
CAediting_459723	chr6_13646383_-	intronic
CAediting_459724	chr6_13646404_-	intronic
CAediting_459725	chr6_13646408_-	intronic
CAediting_459726	chr6_13646409_-	intronic
CAediting_459727	chr6_13648212_-	intronic
CAediting_459728	chr6_13648221_-	intronic
CAediting_459729	chr6_13648222_-	intronic
CAediting_459730	chr6_13648226_-	intronic
CAediting_459731	chr6_13648233_-	intronic
CAediting_459732	chr6_13648246_-	intronic
CAediting_459733	chr6_13648247_-	intronic
CAediting_459734	chr6_13648261_-	intronic
CAediting_459735	chr6_13648271_-	intronic
CAediting_459736	chr6_13648278_-	intronic
CAediting_459737	chr6_13648286_-	intronic
CAediting_459738	chr6_13648296_-	intronic
CAediting_459739	chr6_13648308_-	intronic
CAediting_459740	chr6_13648312_-	intronic
CAediting_459741	chr6_13648315_-	intronic
CAediting_459742	chr6_13648316_-	intronic
CAediting_459743	chr6_13648318_-	intronic
CAediting_459744	chr6_13648321_-	intronic
CAediting_459745	chr6_13648323_-	intronic
CAediting_459746	chr6_13648324_-	intronic
CAediting_459747	chr6_13648325_-	intronic
CAediting_459748	chr6_13648326_-	intronic
CAediting_459749	chr6_13648327_-	intronic
CAediting_459750	chr6_13648330_-	intronic
CAediting_459751	chr6_13648341_-	intronic
CAediting_459752	chr6_13648342_-	intronic
CAediting_459753	chr6_13648349_-	intronic
CAediting_459754	chr6_13648352_-	intronic
CAediting_459755	chr6_13648366_-	intronic
CAediting_459756	chr6_13648367_-	intronic
CAediting_459757	chr6_13648374_-	intronic
CAediting_459758	chr6_13648410_-	intronic
CAediting_459759	chr6_13648411_-	intronic
CAediting_459760	chr6_13648419_-	intronic
CAediting_459761	chr6_13650797_-	intronic
CAediting_459762	chr6_13650834_-	intronic
CAediting_459763	chr6_13650842_-	intronic
CAediting_459764	chr6_13650852_-	intronic
CAediting_459765	chr6_13650856_-	intronic
CAediting_459766	chr6_13650869_-	intronic
CAediting_459767	chr6_13650881_-	intronic
CAediting_459768	chr6_13650882_-	intronic
CAediting_459769	chr6_13650888_-	intronic
CAediting_459770	chr6_13650942_-	intronic
CAediting_459771	chr6_13650950_-	intronic
CAediting_459772	chr6_13651392_-	intronic
CAediting_459773	chr6_13651491_-	intronic
CAediting_459774	chr6_13651506_-	intronic
CAediting_459775	chr6_13651519_-	intronic
CAediting_459776	chr6_13651533_-	intronic
CAediting_459777	chr6_13651605_-	intronic
CAediting_459778	chr6_13651650_-	intronic
CAediting_459779	chr6_13651660_-	intronic
CAediting_459780	chr6_13651679_-	intronic
CAediting_459781	chr6_13666680_-	intronic
CAediting_459782	chr6_13666722_-	intronic
CAediting_459783	chr6_13666752_-	intronic
CAediting_459784	chr6_13666753_-	intronic
CAediting_459785	chr6_13669653_-	intronic
CAediting_459786	chr6_13669663_-	intronic
CAediting_459787	chr6_13669664_-	intronic
CAediting_459788	chr6_13669745_-	intronic
CAediting_459789	chr6_13669769_-	intronic
CAediting_459790	chr6_13669770_-	intronic
CAediting_459791	chr6_13669771_-	intronic
CAediting_459792	chr6_13669772_-	intronic
CAediting_459793	chr6_13669796_-	intronic
CAediting_459794	chr6_13669867_-	intronic
CAediting_459795	chr6_13670200_-	intronic
CAediting_459796	chr6_13674032_-	intronic
CAediting_459797	chr6_13677861_-	intronic
CAediting_459798	chr6_13677900_-	intronic
CAediting_459799	chr6_13677915_-	intronic
CAediting_459800	chr6_13677963_-	intronic
CAediting_459801	chr6_13677971_-	intronic
CAediting_459802	chr6_13682135_-	intronic
CAediting_459803	chr6_13682520_-	intronic
CAediting_459804	chr6_13685457_-	intronic
CAediting_459805	chr6_13685490_-	intronic
CAediting_459806	chr6_13685673_-	intronic
CAediting_459807	chr6_13685685_-	intronic
CAediting_459808	chr6_13685686_-	intronic
CAediting_459809	chr6_13685845_-	intronic
CAediting_459810	chr6_13685848_-	intronic
CAediting_459811	chr6_13685849_-	intronic
CAediting_459812	chr6_13685855_-	intronic
CAediting_459813	chr6_13685885_-	intronic
CAediting_459814	chr6_13686147_-	intronic
CAediting_459815	chr6_13686197_-	intronic
CAediting_459816	chr6_13686202_-	intronic
CAediting_459817	chr6_13686212_-	intronic
CAediting_459818	chr6_13686220_-	intronic
CAediting_459819	chr6_13686228_-	intronic
CAediting_459820	chr6_13686397_-	intronic
CAediting_459821	chr6_13686557_-	intronic
CAediting_459822	chr6_13686659_-	intronic
CAediting_459823	chr6_13686699_-	intronic
CAediting_459824	chr6_13687388_-	intronic
CAediting_459825	chr6_13687436_-	intronic
CAediting_459826	chr6_13687474_-	intronic
CAediting_459827	chr6_13688887_-	intronic
CAediting_459828	chr6_13688890_-	intronic
CAediting_459829	chr6_13688908_-	intronic
CAediting_459830	chr6_13688909_-	intronic
CAediting_459831	chr6_13688925_-	intronic
CAediting_459832	chr6_13688929_-	intronic
CAediting_459833	chr6_13689052_-	intronic
CAediting_459834	chr6_13689121_-	intronic
CAediting_459835	chr6_13689135_-	intronic
CAediting_459836	chr6_13689275_-	intronic
CAediting_459837	chr6_13689323_-	intronic
CAediting_459838	chr6_13689331_-	intronic
CAediting_459839	chr6_13689333_-	intronic
CAediting_459840	chr6_13689338_-	intronic
CAediting_459841	chr6_13689347_-	intronic
CAediting_459842	chr6_13689355_-	intronic
CAediting_459843	chr6_13689363_-	intronic
CAediting_459844	chr6_13689367_-	intronic
CAediting_459845	chr6_13689368_-	intronic
CAediting_459846	chr6_13689376_-	intronic
CAediting_459847	chr6_13689379_-	intronic
CAediting_459848	chr6_13689382_-	intronic
CAediting_459849	chr6_13689386_-	intronic
CAediting_459850	chr6_13689387_-	intronic
CAediting_459851	chr6_13689391_-	intronic
CAediting_459852	chr6_13689409_-	intronic
CAediting_459853	chr6_13689419_-	intronic
CAediting_459854	chr6_13689435_-	intronic
CAediting_459855	chr6_13689439_-	intronic
CAediting_459856	chr6_13689447_-	intronic
CAediting_459857	chr6_13689471_-	intronic
CAediting_459858	chr6_13689477_-	intronic
CAediting_459859	chr6_13689487_-	intronic
CAediting_459860	chr6_13689500_-	intronic
CAediting_459861	chr6_13689501_-	intronic
CAediting_459862	chr6_13689506_-	intronic
CAediting_459863	chr6_13689511_-	intronic
CAediting_459864	chr6_13689534_-	intronic
CAediting_459865	chr6_13689540_-	intronic
CAediting_459866	chr6_13689546_-	intronic
CAediting_459867	chr6_13689568_-	intronic
CAediting_459868	chr6_13689976_-	intronic
CAediting_459869	chr6_13690975_-	intronic
CAediting_459870	chr6_13691010_-	intronic
CAediting_459871	chr6_13691023_-	intronic
CAediting_459872	chr6_13691068_-	intronic
CAediting_459873	chr6_13691082_-	intronic
CAediting_459874	chr6_13691085_-	intronic
CAediting_459875	chr6_13691086_-	intronic
CAediting_459876	chr6_13691708_-	intronic
CAediting_459877	chr6_13691763_-	intronic
CAediting_459878	chr6_13691949_-	intronic
CAediting_459879	chr6_13706232_-	intronic
CAediting_459880	chr6_13706878_-	intronic
CAediting_459881	chr6_13706880_-	intronic
CAediting_459882	chr6_13707218_-	intronic
CAediting_459883	chr6_13707270_-	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_459709	chr6_13633111_-	SINE	Alu	AluSg
CAediting_459710	chr6_13633143_-	SINE	Alu	AluSg
CAediting_459711	chr6_13633195_-	SINE	Alu	AluSg
CAediting_459712	chr6_13633224_-	SINE	Alu	AluSg
CAediting_459713	chr6_13633269_-	SINE	Alu	AluSg
CAediting_459714	chr6_13633284_-	SINE	Alu	AluSg
CAediting_459715	chr6_13638572_-	SINE	Alu	FLAM_C
CAediting_459716	chr6_13638586_-	SINE	Alu	FLAM_C
CAediting_459717	chr6_13638596_-	SINE	Alu	FLAM_C
CAediting_459718	chr6_13639317_-	SINE	Alu	AluSg
CAediting_459719	chr6_13639451_-	SINE	Alu	AluSg
CAediting_459720	chr6_13639459_-	SINE	Alu	AluSg
CAediting_459721	chr6_13646326_-	SINE	Alu	AluSq
CAediting_459722	chr6_13646375_-	SINE	Alu	AluSq
CAediting_459723	chr6_13646383_-	SINE	Alu	AluSq
CAediting_459724	chr6_13646404_-	SINE	Alu	AluSq
CAediting_459725	chr6_13646408_-	SINE	Alu	AluSq
CAediting_459726	chr6_13646409_-	SINE	Alu	AluSq
CAediting_459727	chr6_13648212_-	SINE	Alu	AluSc
CAediting_459728	chr6_13648221_-	SINE	Alu	AluSc
CAediting_459729	chr6_13648222_-	SINE	Alu	AluSc
CAediting_459730	chr6_13648226_-	SINE	Alu	AluSc
CAediting_459731	chr6_13648233_-	SINE	Alu	AluSc
CAediting_459732	chr6_13648246_-	SINE	Alu	AluSc
CAediting_459733	chr6_13648247_-	SINE	Alu	AluSc
CAediting_459734	chr6_13648261_-	SINE	Alu	AluSc
CAediting_459735	chr6_13648271_-	SINE	Alu	AluSc
CAediting_459736	chr6_13648278_-	SINE	Alu	AluSc
CAediting_459737	chr6_13648286_-	SINE	Alu	AluSc
CAediting_459738	chr6_13648296_-	SINE	Alu	AluSc
CAediting_459739	chr6_13648308_-	SINE	Alu	AluSc
CAediting_459740	chr6_13648312_-	SINE	Alu	AluSc
CAediting_459741	chr6_13648315_-	SINE	Alu	AluSc
CAediting_459742	chr6_13648316_-	SINE	Alu	AluSc
CAediting_459743	chr6_13648318_-	SINE	Alu	AluSc
CAediting_459744	chr6_13648321_-	SINE	Alu	AluSc
CAediting_459745	chr6_13648323_-	SINE	Alu	AluSc
CAediting_459746	chr6_13648324_-	SINE	Alu	AluSc
CAediting_459747	chr6_13648325_-	SINE	Alu	AluSc
CAediting_459748	chr6_13648326_-	SINE	Alu	AluSc
CAediting_459749	chr6_13648327_-	SINE	Alu	AluSc
CAediting_459750	chr6_13648330_-	SINE	Alu	AluSc
CAediting_459751	chr6_13648341_-	SINE	Alu	AluSc
CAediting_459752	chr6_13648342_-	SINE	Alu	AluSc
CAediting_459753	chr6_13648349_-	SINE	Alu	AluSc
CAediting_459754	chr6_13648352_-	SINE	Alu	AluSc
CAediting_459755	chr6_13648366_-	SINE	Alu	AluSc
CAediting_459756	chr6_13648367_-	SINE	Alu	AluSc
CAediting_459757	chr6_13648374_-	SINE	Alu	AluSc
CAediting_459758	chr6_13648410_-	SINE	Alu	AluSc
CAediting_459759	chr6_13648411_-	SINE	Alu	AluSc
CAediting_459760	chr6_13648419_-	SINE	Alu	AluSc
CAediting_459761	chr6_13650797_-	SINE	Alu	AluSx3
CAediting_459762	chr6_13650834_-	SINE	Alu	AluSx3
CAediting_459763	chr6_13650842_-	SINE	Alu	AluSx3
CAediting_459764	chr6_13650852_-	SINE	Alu	AluSx3
CAediting_459765	chr6_13650856_-	SINE	Alu	AluSx3
CAediting_459766	chr6_13650869_-	SINE	Alu	AluSx3
CAediting_459767	chr6_13650881_-	SINE	Alu	AluSx3
CAediting_459768	chr6_13650882_-	SINE	Alu	AluSx3
CAediting_459769	chr6_13650888_-	SINE	Alu	AluSx3
CAediting_459770	chr6_13650942_-	SINE	Alu	AluSx3
CAediting_459771	chr6_13650950_-	SINE	Alu	AluSx3
CAediting_459772	chr6_13651392_-	SINE	Alu	AluY
CAediting_459773	chr6_13651491_-	SINE	Alu	AluY
CAediting_459774	chr6_13651506_-	SINE	Alu	AluY
CAediting_459775	chr6_13651519_-	SINE	Alu	AluY
CAediting_459776	chr6_13651533_-	SINE	Alu	AluY
CAediting_459777	chr6_13651605_-	SINE	Alu	AluY
CAediting_459778	chr6_13651650_-	SINE	Alu	AluY
CAediting_459779	chr6_13651660_-	SINE	Alu	AluY
CAediting_459780	chr6_13651679_-	SINE	Alu	AluY
CAediting_459781	chr6_13666680_-	SINE	Alu	AluJb
CAediting_459782	chr6_13666722_-	SINE	Alu	AluJb
CAediting_459783	chr6_13666752_-	SINE	Alu	AluJb
CAediting_459784	chr6_13666753_-	SINE	Alu	AluJb
CAediting_459785	chr6_13669653_-	SINE	Alu	AluJb
CAediting_459786	chr6_13669663_-	SINE	Alu	AluJb
CAediting_459787	chr6_13669664_-	SINE	Alu	AluJb
CAediting_459788	chr6_13669745_-	SINE	Alu	AluJb
CAediting_459789	chr6_13669769_-	SINE	Alu	AluJb
CAediting_459790	chr6_13669770_-	SINE	Alu	AluJb
CAediting_459791	chr6_13669771_-	SINE	Alu	AluJb
CAediting_459792	chr6_13669772_-	SINE	Alu	AluJb
CAediting_459793	chr6_13669796_-	SINE	Alu	AluJb
CAediting_459794	chr6_13669867_-	SINE	Alu	AluJb
CAediting_459795	chr6_13670200_-	SINE	Alu	AluSz6
CAediting_459796	chr6_13674032_-	SINE	Alu	AluJb
CAediting_459797	chr6_13677861_-	SINE	Alu	AluJb
CAediting_459798	chr6_13677900_-	SINE	Alu	AluJb
CAediting_459799	chr6_13677915_-	SINE	Alu	AluJb
CAediting_459800	chr6_13677963_-	SINE	Alu	AluJb
CAediting_459801	chr6_13677971_-	SINE	Alu	AluJb
CAediting_459802	chr6_13682135_-	SINE	Alu	AluSx
CAediting_459803	chr6_13682520_-	SINE	Alu	AluSq2
CAediting_459804	chr6_13685457_-	SINE	Alu	AluJr4
CAediting_459805	chr6_13685490_-	SINE	Alu	AluJr4
CAediting_459806	chr6_13685673_-	SINE	Alu	AluSc
CAediting_459807	chr6_13685685_-	SINE	Alu	AluSc
CAediting_459808	chr6_13685686_-	SINE	Alu	AluSc
CAediting_459809	chr6_13685845_-	SINE	Alu	AluSc
CAediting_459810	chr6_13685848_-	SINE	Alu	AluSc
CAediting_459811	chr6_13685849_-	SINE	Alu	AluSc
CAediting_459812	chr6_13685855_-	SINE	Alu	AluSc
CAediting_459813	chr6_13685885_-	SINE	Alu	AluSc
CAediting_459814	chr6_13686147_-	SINE	Alu	AluJo
CAediting_459815	chr6_13686197_-	SINE	Alu	AluJo
CAediting_459816	chr6_13686202_-	SINE	Alu	AluJo
CAediting_459817	chr6_13686212_-	SINE	Alu	AluJo
CAediting_459818	chr6_13686220_-	SINE	Alu	AluJo
CAediting_459819	chr6_13686228_-	SINE	Alu	AluJo
CAediting_459820	chr6_13686397_-	SINE	Alu	AluSx
CAediting_459821	chr6_13686557_-	SINE	Alu	AluSx
CAediting_459822	chr6_13686659_-	SINE	Alu	AluJo
CAediting_459823	chr6_13686699_-	SINE	Alu	AluJo
CAediting_459824	chr6_13687388_-	SINE	Alu	AluJo
CAediting_459825	chr6_13687436_-	SINE	Alu	AluJo
CAediting_459826	chr6_13687474_-	SINE	Alu	AluJo
CAediting_459827	chr6_13688887_-	SINE	Alu	AluJr
CAediting_459828	chr6_13688890_-	SINE	Alu	AluJr
CAediting_459829	chr6_13688908_-	SINE	Alu	AluJr
CAediting_459830	chr6_13688909_-	SINE	Alu	AluJr
CAediting_459831	chr6_13688925_-	SINE	Alu	AluJr
CAediting_459832	chr6_13688929_-	SINE	Alu	AluJr
CAediting_459833	chr6_13689052_-	SINE	Alu	AluJr
CAediting_459834	chr6_13689121_-	SINE	Alu	AluJr
CAediting_459835	chr6_13689135_-	SINE	Alu	AluJr
CAediting_459836	chr6_13689275_-	SINE	Alu	AluSx
CAediting_459837	chr6_13689323_-	SINE	Alu	AluSx
CAediting_459838	chr6_13689331_-	SINE	Alu	AluSx
CAediting_459839	chr6_13689333_-	SINE	Alu	AluSx
CAediting_459840	chr6_13689338_-	SINE	Alu	AluSx
CAediting_459841	chr6_13689347_-	SINE	Alu	AluSx
CAediting_459842	chr6_13689355_-	SINE	Alu	AluSx
CAediting_459843	chr6_13689363_-	SINE	Alu	AluSx
CAediting_459844	chr6_13689367_-	SINE	Alu	AluSx
CAediting_459845	chr6_13689368_-	SINE	Alu	AluSx
CAediting_459846	chr6_13689376_-	SINE	Alu	AluSx
CAediting_459847	chr6_13689379_-	SINE	Alu	AluSx
CAediting_459848	chr6_13689382_-	SINE	Alu	AluSx
CAediting_459849	chr6_13689386_-	SINE	Alu	AluSx
CAediting_459850	chr6_13689387_-	SINE	Alu	AluSx
CAediting_459851	chr6_13689391_-	SINE	Alu	AluSx
CAediting_459852	chr6_13689409_-	SINE	Alu	AluSx
CAediting_459853	chr6_13689419_-	SINE	Alu	AluSx
CAediting_459854	chr6_13689435_-	SINE	Alu	AluSx
CAediting_459855	chr6_13689439_-	SINE	Alu	AluSx
CAediting_459856	chr6_13689447_-	SINE	Alu	AluSx
CAediting_459857	chr6_13689471_-	SINE	Alu	AluSx
CAediting_459858	chr6_13689477_-	SINE	Alu	AluSx
CAediting_459859	chr6_13689487_-	SINE	Alu	AluSx
CAediting_459860	chr6_13689500_-	SINE	Alu	AluSx
CAediting_459861	chr6_13689501_-	SINE	Alu	AluSx
CAediting_459862	chr6_13689506_-	SINE	Alu	AluSx
CAediting_459863	chr6_13689511_-	SINE	Alu	AluSx
CAediting_459864	chr6_13689534_-	SINE	Alu	AluSx
CAediting_459865	chr6_13689540_-	SINE	Alu	AluSx
CAediting_459866	chr6_13689546_-	SINE	Alu	AluSx
CAediting_459867	chr6_13689568_-	SINE	Alu	AluSx
CAediting_459869	chr6_13690975_-	SINE	Alu	AluSz
CAediting_459870	chr6_13691010_-	SINE	Alu	AluSz
CAediting_459871	chr6_13691023_-	SINE	Alu	AluSz
CAediting_459872	chr6_13691068_-	SINE	Alu	AluSz
CAediting_459873	chr6_13691082_-	SINE	Alu	AluSz
CAediting_459874	chr6_13691085_-	SINE	Alu	AluSz
CAediting_459875	chr6_13691086_-	SINE	Alu	AluSz
CAediting_459876	chr6_13691708_-	SINE	Alu	AluSx3
CAediting_459877	chr6_13691763_-	SINE	Alu	AluSx3
CAediting_459878	chr6_13691949_-	SINE	Alu	AluSx3
CAediting_459879	chr6_13706232_-	SINE	Alu	AluY
CAediting_459880	chr6_13706878_-	SINE	Alu	AluSx1
CAediting_459881	chr6_13706880_-	SINE	Alu	AluSx1
CAediting_459882	chr6_13707218_-	SINE	Alu	AluJo
CAediting_459883	chr6_13707270_-	SINE	Alu	AluJo

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RNA A-to-I editing events in the alternative splicing sites for RANBP9

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000010017.12.RANBP9.

Correlation between RNA A-to-I editing and PSI for ENSG00000010017.12.RANBP9.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RANBP9

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for RANBP9

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for RANBP9

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229414	chr17_67471546_+	ENSG00000010017.12	ENST00000011619	hsa-miR-548aa	13621755	13621761	7mer-m8	13621754	13621778	140	-11.48
CAediting_1368054	chr19_46709310_-	ENSG00000010017.12	ENST00000011619	hsa-miR-320e	13622298	13622304	7mer-m8	13622297	13622314	144	-15.86

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000010017.12	ENST00000011619	hsa-miR-200b-3p	13621674	13621681	8mer-1a	13621674	13621693	151	-12.24

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for RANBP9

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for RANBP9

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for RANBP9

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for RANBP9

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for RANBP9

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for RANBP9

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
RANBP9	C0036341	Schizophrenia	1	PSYGENET

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene