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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: SH2D3A (CAeditome ID:10045)

Gene summary for SH2D3A

check button Gene summary
Gene informationGene symbol

SH2D3A

Gene ID

10045

Gene nameSH2 domain containing 3A
SynonymsNSP1
Cytomap

19p13.3

Type of geneprotein-coding
DescriptionSH2 domain-containing protein 3Anovel SH2-containing protein 1
Modification date20210529
UniProtAcc

Q9BRG2

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for SH2D3A

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000125731.11

check button RNA A-to-I editing events in Cancer.
CAediting_1281966(6752226, -), CAediting_1281967(6752233, -), CAediting_1281968(6752236, -), CAediting_1281969(6752241, -), CAediting_1281970(6752244, -), CAediting_1281971(6752256, -), CAediting_1281972(6752290, -), CAediting_1281973(6755612, -), CAediting_1281974(6755616, -), CAediting_1281975(6755619, -), CAediting_1281976(6755621, -), CAediting_1281977(6755636, -), CAediting_1281978(6755639, -), CAediting_1281979(6755679, -), CAediting_1281980(6755680, -), CAediting_1281981(6755822, -), CAediting_1281982(6755834, -), CAediting_1281983(6755849, -), CAediting_1281984(6755858, -), CAediting_1281985(6755861, -), CAediting_1281986(6755862, -), CAediting_1281987(6755868, -), CAediting_1281988(6755874, -), CAediting_1281989(6755896, -), CAediting_1281990(6755906, -), CAediting_1281991(6755910, -), CAediting_1281992(6755949, -), CAediting_1281993(6755967, -), CAediting_1281994(6755970, -), CAediting_1281995(6755971, -), CAediting_1281996(6755984, -), CAediting_1281997(6755996, -), CAediting_1281998(6756025, -), CAediting_1281999(6756033, -), CAediting_1282000(6756044, -), CAediting_1282001(6756049, -), CAediting_1282002(6756057, -), CAediting_1282003(6756065, -), CAediting_1282004(6756907, -), CAediting_1282005(6756938, -), CAediting_1282006(6756944, -), CAediting_1282007(6756946, -), CAediting_1282008(6756956, -), CAediting_1282009(6756967, -), CAediting_1282010(6756982, -), CAediting_1282011(6756985, -), CAediting_1282012(6757046, -), CAediting_1282013(6757049, -), CAediting_1282014(6757060, -), CAediting_1282015(6757086, -), CAediting_1282016(6757093, -), CAediting_1282017(6757114, -), CAediting_1282018(6757115, -), CAediting_1282019(6757137, -), CAediting_1282020(6757145, -), CAediting_1282021(6757353, -), CAediting_1282022(6757365, -), CAediting_1282023(6757378, -), CAediting_1282024(6757383, -), CAediting_1282025(6757390, -), CAediting_1282026(6757394, -), CAediting_1282027(6757406, -), CAediting_1282028(6757407, -), CAediting_1282029(6757414, -), CAediting_1282030(6757415, -), CAediting_1282031(6757429, -), CAediting_1282032(6757432, -), CAediting_1282033(6757439, -), CAediting_1282034(6757446, -), CAediting_1282035(6757464, -), CAediting_1282036(6757700, -), CAediting_1282037(6757701, -), CAediting_1282038(6757710, -), CAediting_1282039(6757715, -), CAediting_1282040(6757719, -), CAediting_1282041(6757728, -), CAediting_1282042(6757740, -), CAediting_1282043(6757782, -), CAediting_1282044(6757821, -), CAediting_1282045(6757831, -), CAediting_1282046(6757834, -), CAediting_1282047(6757843, -), CAediting_1282048(6757860, -), CAediting_1282049(6757874, -), CAediting_1282050(6757880, -), CAediting_1282051(6757886, -), CAediting_1282052(6757904, -), CAediting_1282053(6757938, -), CAediting_1282054(6757940, -), CAediting_1282055(6758098, -), CAediting_1282056(6758099, -), CAediting_1282057(6758115, -), CAediting_1282058(6758125, -), CAediting_1282059(6758183, -), CAediting_1282060(6758184, -), CAediting_1282061(6758207, -), CAediting_1282062(6758230, -), CAediting_1282063(6758231, -), CAediting_1282064(6758253, -), CAediting_1282065(6758261, -), CAediting_1282066(6758323, -), CAediting_1282067(6758329, -), CAediting_1282068(6758331, -), CAediting_1282069(6758332, -), CAediting_1282070(6758354, -), CAediting_1282071(6758361, -), CAediting_1282072(6758379, -), CAediting_1282073(6758390, -), CAediting_1282074(6758391, -), CAediting_1282075(6758399, -), CAediting_1282076(6758405, -), CAediting_1282077(6758415, -), CAediting_1282078(6758440, -), CAediting_1282079(6758441, -), CAediting_1282080(6758449, -), CAediting_1282081(6758467, -), CAediting_1282082(6758474, -), CAediting_1282083(6758485, -), CAediting_1282084(6758506, -), CAediting_1282085(6758519, -), CAediting_1282086(6758530, -), CAediting_1282087(6758535, -), CAediting_1282088(6758540, -), CAediting_1282089(6758554, -), CAediting_1282090(6758560, -), CAediting_1282091(6758575, -), CAediting_1282092(6758576, -), CAediting_1282093(6758592, -), CAediting_1282094(6758598, -), CAediting_1282095(6759142, -), CAediting_1282096(6759143, -), CAediting_1282097(6759146, -), CAediting_1282098(6759210, -), CAediting_1282099(6759211, -), CAediting_1282100(6759225, -), CAediting_1282101(6759251, -), CAediting_1282102(6759252, -), CAediting_1282103(6759262, -), CAediting_1282104(6759273, -), CAediting_1282105(6759278, -), CAediting_1282106(6759295, -), CAediting_1282107(6759306, -), CAediting_1282108(6759385, -), CAediting_1282109(6761703, -), CAediting_1282110(6761718, -), CAediting_1282111(6761730, -), CAediting_1282112(6761731, -), CAediting_1282113(6761745, -), CAediting_1282114(6761776, -), CAediting_1282115(6761794, -), CAediting_1282116(6761817, -), CAediting_1282117(6761935, -), CAediting_1282118(6762289, -), CAediting_1282119(6762328, -), CAediting_1282120(6762332, -), CAediting_1282121(6762348, -), CAediting_1282122(6762352, -), CAediting_1282123(6762378, -), CAediting_1282124(6762416, -), CAediting_1282125(6762417, -), CAediting_1282126(6762422, -), CAediting_1282127(6762449, -), CAediting_1282128(6762604, -), CAediting_1282129(6762605, -), CAediting_1282130(6762638, -), CAediting_1282131(6762639, -), CAediting_1282132(6762655, -), CAediting_1282133(6762718, -), CAediting_1282134(6762765, -), CAediting_1282135(6763202, -), CAediting_1282136(6763212, -), CAediting_1282137(6763233, -), CAediting_1282138(6763234, -), CAediting_1282139(6763235, -), CAediting_1282140(6763237, -), CAediting_1282141(6763252, -), CAediting_1282142(6763257, -), CAediting_1282143(6763291, -), CAediting_1282144(6763295, -), CAediting_1282145(6763320, -), CAediting_1282146(6764024, -), CAediting_1282147(6764143, -), CAediting_1282148(6764161, -), CAediting_1282149(6764940, -), CAediting_1282150(6764949, -), CAediting_1282151(6764960, -), CAediting_1282152(6765016, -), CAediting_1282153(6765056, -), CAediting_1282154(6765057, -), CAediting_1282155(6765063, -), CAediting_1282156(6765069, -), CAediting_1282157(6765074, -), CAediting_1282158(6765075, -), CAediting_1282159(6765108, -),

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RNA editing positional annotations for SH2D3A using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1281966chr19_6752226_-ncRNA_exonic
CAediting_1281967chr19_6752233_-ncRNA_intronic
CAediting_1281968chr19_6752236_-ncRNA_intronic
CAediting_1281969chr19_6752241_-ncRNA_intronic
CAediting_1281970chr19_6752244_-ncRNA_intronic
CAediting_1281971chr19_6752256_-ncRNA_intronic
CAediting_1281972chr19_6752290_-ncRNA_intronic
CAediting_1281973chr19_6755612_-ncRNA_intronic
CAediting_1281974chr19_6755616_-ncRNA_intronic
CAediting_1281975chr19_6755619_-ncRNA_intronic
CAediting_1281976chr19_6755621_-ncRNA_intronic
CAediting_1281977chr19_6755636_-ncRNA_intronic
CAediting_1281978chr19_6755639_-ncRNA_intronic
CAediting_1281979chr19_6755679_-ncRNA_intronic
CAediting_1281980chr19_6755680_-ncRNA_intronic
CAediting_1281981chr19_6755822_-ncRNA_intronic
CAediting_1281982chr19_6755834_-ncRNA_intronic
CAediting_1281983chr19_6755849_-ncRNA_intronic
CAediting_1281984chr19_6755858_-ncRNA_intronic
CAediting_1281985chr19_6755861_-ncRNA_intronic
CAediting_1281986chr19_6755862_-ncRNA_intronic
CAediting_1281987chr19_6755868_-ncRNA_intronic
CAediting_1281988chr19_6755874_-ncRNA_intronic
CAediting_1281989chr19_6755896_-ncRNA_intronic
CAediting_1281990chr19_6755906_-ncRNA_intronic
CAediting_1281991chr19_6755910_-ncRNA_intronic
CAediting_1281992chr19_6755949_-ncRNA_intronic
CAediting_1281993chr19_6755967_-ncRNA_intronic
CAediting_1281994chr19_6755970_-ncRNA_intronic
CAediting_1281995chr19_6755971_-ncRNA_intronic
CAediting_1281996chr19_6755984_-ncRNA_intronic
CAediting_1281997chr19_6755996_-ncRNA_intronic
CAediting_1281998chr19_6756025_-ncRNA_intronic
CAediting_1281999chr19_6756033_-ncRNA_intronic
CAediting_1282000chr19_6756044_-ncRNA_intronic
CAediting_1282001chr19_6756049_-ncRNA_intronic
CAediting_1282002chr19_6756057_-ncRNA_intronic
CAediting_1282003chr19_6756065_-ncRNA_intronic
CAediting_1282004chr19_6756907_-ncRNA_intronic
CAediting_1282005chr19_6756938_-ncRNA_intronic
CAediting_1282006chr19_6756944_-ncRNA_intronic
CAediting_1282007chr19_6756946_-ncRNA_intronic
CAediting_1282008chr19_6756956_-ncRNA_intronic
CAediting_1282009chr19_6756967_-ncRNA_intronic
CAediting_1282010chr19_6756982_-ncRNA_intronic
CAediting_1282011chr19_6756985_-ncRNA_intronic
CAediting_1282012chr19_6757046_-ncRNA_intronic
CAediting_1282013chr19_6757049_-ncRNA_intronic
CAediting_1282014chr19_6757060_-ncRNA_intronic
CAediting_1282015chr19_6757086_-ncRNA_intronic
CAediting_1282016chr19_6757093_-ncRNA_intronic
CAediting_1282017chr19_6757114_-ncRNA_intronic
CAediting_1282018chr19_6757115_-ncRNA_intronic
CAediting_1282019chr19_6757137_-ncRNA_intronic
CAediting_1282020chr19_6757145_-ncRNA_intronic
CAediting_1282021chr19_6757353_-ncRNA_exonic
CAediting_1282022chr19_6757365_-ncRNA_exonic
CAediting_1282023chr19_6757378_-ncRNA_exonic
CAediting_1282024chr19_6757383_-ncRNA_exonic
CAediting_1282025chr19_6757390_-ncRNA_exonic
CAediting_1282026chr19_6757394_-ncRNA_exonic
CAediting_1282027chr19_6757406_-ncRNA_exonic
CAediting_1282028chr19_6757407_-ncRNA_exonic
CAediting_1282029chr19_6757414_-ncRNA_exonic
CAediting_1282030chr19_6757415_-ncRNA_exonic
CAediting_1282031chr19_6757429_-ncRNA_exonic
CAediting_1282032chr19_6757432_-ncRNA_exonic
CAediting_1282033chr19_6757439_-ncRNA_exonic
CAediting_1282034chr19_6757446_-ncRNA_exonic
CAediting_1282035chr19_6757464_-ncRNA_exonic
CAediting_1282036chr19_6757700_-ncRNA_exonic
CAediting_1282037chr19_6757701_-ncRNA_exonic
CAediting_1282038chr19_6757710_-ncRNA_exonic
CAediting_1282039chr19_6757715_-ncRNA_exonic
CAediting_1282040chr19_6757719_-ncRNA_exonic
CAediting_1282041chr19_6757728_-ncRNA_exonic
CAediting_1282042chr19_6757740_-ncRNA_exonic
CAediting_1282043chr19_6757782_-ncRNA_exonic
CAediting_1282044chr19_6757821_-ncRNA_exonic
CAediting_1282045chr19_6757831_-ncRNA_exonic
CAediting_1282046chr19_6757834_-ncRNA_exonic
CAediting_1282047chr19_6757843_-ncRNA_exonic
CAediting_1282048chr19_6757860_-ncRNA_exonic
CAediting_1282049chr19_6757874_-ncRNA_exonic
CAediting_1282050chr19_6757880_-ncRNA_exonic
CAediting_1282051chr19_6757886_-ncRNA_exonic
CAediting_1282052chr19_6757904_-ncRNA_exonic
CAediting_1282053chr19_6757938_-ncRNA_exonic
CAediting_1282054chr19_6757940_-ncRNA_exonic
CAediting_1282055chr19_6758098_-ncRNA_exonic
CAediting_1282056chr19_6758099_-ncRNA_exonic
CAediting_1282057chr19_6758115_-ncRNA_exonic
CAediting_1282058chr19_6758125_-ncRNA_exonic
CAediting_1282059chr19_6758183_-ncRNA_exonic
CAediting_1282060chr19_6758184_-ncRNA_exonic
CAediting_1282061chr19_6758207_-ncRNA_exonic
CAediting_1282062chr19_6758230_-ncRNA_exonic
CAediting_1282063chr19_6758231_-ncRNA_exonic
CAediting_1282064chr19_6758253_-ncRNA_exonic
CAediting_1282065chr19_6758261_-ncRNA_exonic
CAediting_1282066chr19_6758323_-ncRNA_exonic
CAediting_1282067chr19_6758329_-ncRNA_exonic
CAediting_1282068chr19_6758331_-ncRNA_exonic
CAediting_1282069chr19_6758332_-ncRNA_exonic
CAediting_1282070chr19_6758354_-ncRNA_exonic
CAediting_1282071chr19_6758361_-ncRNA_exonic
CAediting_1282072chr19_6758379_-ncRNA_exonic
CAediting_1282073chr19_6758390_-ncRNA_exonic
CAediting_1282074chr19_6758391_-ncRNA_exonic
CAediting_1282075chr19_6758399_-ncRNA_exonic
CAediting_1282076chr19_6758405_-ncRNA_exonic
CAediting_1282077chr19_6758415_-ncRNA_exonic
CAediting_1282078chr19_6758440_-ncRNA_exonic
CAediting_1282079chr19_6758441_-ncRNA_exonic
CAediting_1282080chr19_6758449_-ncRNA_exonic
CAediting_1282081chr19_6758467_-ncRNA_exonic
CAediting_1282082chr19_6758474_-ncRNA_exonic
CAediting_1282083chr19_6758485_-ncRNA_exonic
CAediting_1282084chr19_6758506_-ncRNA_exonic
CAediting_1282085chr19_6758519_-ncRNA_exonic
CAediting_1282086chr19_6758530_-ncRNA_exonic
CAediting_1282087chr19_6758535_-ncRNA_exonic
CAediting_1282088chr19_6758540_-ncRNA_exonic
CAediting_1282089chr19_6758554_-ncRNA_exonic
CAediting_1282090chr19_6758560_-ncRNA_exonic
CAediting_1282091chr19_6758575_-ncRNA_exonic
CAediting_1282092chr19_6758576_-ncRNA_exonic
CAediting_1282093chr19_6758592_-ncRNA_exonic
CAediting_1282094chr19_6758598_-ncRNA_exonic
CAediting_1282095chr19_6759142_-ncRNA_exonic
CAediting_1282096chr19_6759143_-ncRNA_exonic
CAediting_1282097chr19_6759146_-ncRNA_exonic
CAediting_1282098chr19_6759210_-ncRNA_exonic
CAediting_1282099chr19_6759211_-ncRNA_exonic
CAediting_1282100chr19_6759225_-ncRNA_exonic
CAediting_1282101chr19_6759251_-ncRNA_exonic
CAediting_1282102chr19_6759252_-ncRNA_exonic
CAediting_1282103chr19_6759262_-ncRNA_exonic
CAediting_1282104chr19_6759273_-ncRNA_exonic
CAediting_1282105chr19_6759278_-ncRNA_exonic
CAediting_1282106chr19_6759295_-ncRNA_exonic
CAediting_1282107chr19_6759306_-ncRNA_exonic
CAediting_1282108chr19_6759385_-ncRNA_exonic
CAediting_1282109chr19_6761703_-ncRNA_intronic
CAediting_1282110chr19_6761718_-ncRNA_intronic
CAediting_1282111chr19_6761730_-ncRNA_intronic
CAediting_1282112chr19_6761731_-ncRNA_intronic
CAediting_1282113chr19_6761745_-ncRNA_intronic
CAediting_1282114chr19_6761776_-ncRNA_intronic
CAediting_1282115chr19_6761794_-ncRNA_intronic
CAediting_1282116chr19_6761817_-ncRNA_intronic
CAediting_1282117chr19_6761935_-ncRNA_intronic
CAediting_1282118chr19_6762289_-ncRNA_intronic
CAediting_1282119chr19_6762328_-ncRNA_intronic
CAediting_1282120chr19_6762332_-ncRNA_intronic
CAediting_1282121chr19_6762348_-ncRNA_intronic
CAediting_1282122chr19_6762352_-ncRNA_intronic
CAediting_1282123chr19_6762378_-ncRNA_intronic
CAediting_1282124chr19_6762416_-ncRNA_intronic
CAediting_1282125chr19_6762417_-ncRNA_intronic
CAediting_1282126chr19_6762422_-ncRNA_intronic
CAediting_1282127chr19_6762449_-ncRNA_intronic
CAediting_1282128chr19_6762604_-ncRNA_intronic
CAediting_1282129chr19_6762605_-ncRNA_intronic
CAediting_1282130chr19_6762638_-ncRNA_intronic
CAediting_1282131chr19_6762639_-ncRNA_intronic
CAediting_1282132chr19_6762655_-ncRNA_intronic
CAediting_1282133chr19_6762718_-ncRNA_intronic
CAediting_1282134chr19_6762765_-ncRNA_intronic
CAediting_1282135chr19_6763202_-ncRNA_intronic
CAediting_1282136chr19_6763212_-ncRNA_intronic
CAediting_1282137chr19_6763233_-ncRNA_intronic
CAediting_1282138chr19_6763234_-ncRNA_intronic
CAediting_1282139chr19_6763235_-ncRNA_intronic
CAediting_1282140chr19_6763237_-ncRNA_intronic
CAediting_1282141chr19_6763252_-ncRNA_intronic
CAediting_1282142chr19_6763257_-ncRNA_intronic
CAediting_1282143chr19_6763291_-ncRNA_intronic
CAediting_1282144chr19_6763295_-ncRNA_intronic
CAediting_1282145chr19_6763320_-ncRNA_intronic
CAediting_1282146chr19_6764024_-ncRNA_exonic
CAediting_1282147chr19_6764143_-ncRNA_exonic
CAediting_1282148chr19_6764161_-ncRNA_exonic
CAediting_1282149chr19_6764940_-ncRNA_intronic
CAediting_1282150chr19_6764949_-ncRNA_intronic
CAediting_1282151chr19_6764960_-ncRNA_intronic
CAediting_1282152chr19_6765016_-ncRNA_intronic
CAediting_1282153chr19_6765056_-ncRNA_intronic
CAediting_1282154chr19_6765057_-ncRNA_intronic
CAediting_1282155chr19_6765063_-ncRNA_intronic
CAediting_1282156chr19_6765069_-ncRNA_intronic
CAediting_1282157chr19_6765074_-ncRNA_intronic
CAediting_1282158chr19_6765075_-ncRNA_intronic
CAediting_1282159chr19_6765108_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1281966chr19_6752226_-SINEAluAluJr4
CAediting_1281967chr19_6752233_-SINEAluAluJr4
CAediting_1281968chr19_6752236_-SINEAluAluJr4
CAediting_1281969chr19_6752241_-SINEAluAluJr4
CAediting_1281970chr19_6752244_-SINEAluAluJr4
CAediting_1281971chr19_6752256_-SINEAluAluJr4
CAediting_1281972chr19_6752290_-SINEAluAluJr4
CAediting_1281973chr19_6755612_-SINEAluAluJr
CAediting_1281974chr19_6755616_-SINEAluAluJr
CAediting_1281975chr19_6755619_-SINEAluAluJr
CAediting_1281976chr19_6755621_-SINEAluAluJr
CAediting_1281977chr19_6755636_-SINEAluAluJr
CAediting_1281978chr19_6755639_-SINEAluAluJr
CAediting_1281979chr19_6755679_-SINEAluAluJr
CAediting_1281980chr19_6755680_-SINEAluAluJr
CAediting_1281981chr19_6755822_-SINEAluAluJr
CAediting_1281982chr19_6755834_-SINEAluAluJr
CAediting_1281983chr19_6755849_-SINEAluAluJr
CAediting_1281984chr19_6755858_-SINEAluAluJr
CAediting_1281985chr19_6755861_-SINEAluAluJr
CAediting_1281986chr19_6755862_-SINEAluAluJr
CAediting_1281987chr19_6755868_-SINEAluAluJr
CAediting_1281988chr19_6755874_-SINEAluAluJr
CAediting_1281989chr19_6755896_-SINEAluAluJr
CAediting_1281990chr19_6755906_-SINEAluAluJr
CAediting_1281991chr19_6755910_-SINEAluAluJr
CAediting_1281992chr19_6755949_-SINEAluAluJr
CAediting_1281993chr19_6755967_-SINEAluAluJr
CAediting_1281994chr19_6755970_-SINEAluAluJr
CAediting_1281995chr19_6755971_-SINEAluAluJr
CAediting_1281996chr19_6755984_-SINEAluAluJr
CAediting_1281997chr19_6755996_-SINEAluAluJr
CAediting_1281998chr19_6756025_-SINEAluAluJr
CAediting_1281999chr19_6756033_-SINEAluAluJr
CAediting_1282000chr19_6756044_-SINEAluAluJr
CAediting_1282001chr19_6756049_-SINEAluAluJr
CAediting_1282002chr19_6756057_-SINEAluAluJr
CAediting_1282003chr19_6756065_-SINEAluAluJr
CAediting_1282004chr19_6756907_-SINEAluAluSc
CAediting_1282005chr19_6756938_-SINEAluAluSc
CAediting_1282006chr19_6756944_-SINEAluAluSc
CAediting_1282007chr19_6756946_-SINEAluAluSc
CAediting_1282008chr19_6756956_-SINEAluAluSc
CAediting_1282009chr19_6756967_-SINEAluAluSc
CAediting_1282010chr19_6756982_-SINEAluAluSc
CAediting_1282011chr19_6756985_-SINEAluAluSc
CAediting_1282012chr19_6757046_-SINEAluAluSc
CAediting_1282013chr19_6757049_-SINEAluAluSc
CAediting_1282014chr19_6757060_-SINEAluAluSc
CAediting_1282015chr19_6757086_-SINEAluAluSc
CAediting_1282016chr19_6757093_-SINEAluAluSc
CAediting_1282017chr19_6757114_-SINEAluAluSc
CAediting_1282018chr19_6757115_-SINEAluAluSc
CAediting_1282019chr19_6757137_-SINEAluAluSc
CAediting_1282020chr19_6757145_-SINEAluAluSc
CAediting_1282021chr19_6757353_-SINEAluAluJb
CAediting_1282022chr19_6757365_-SINEAluAluJb
CAediting_1282023chr19_6757378_-SINEAluAluJb
CAediting_1282024chr19_6757383_-SINEAluAluJb
CAediting_1282025chr19_6757390_-SINEAluAluJb
CAediting_1282026chr19_6757394_-SINEAluAluJb
CAediting_1282027chr19_6757406_-SINEAluAluJb
CAediting_1282028chr19_6757407_-SINEAluAluJb
CAediting_1282029chr19_6757414_-SINEAluAluJb
CAediting_1282030chr19_6757415_-SINEAluAluJb
CAediting_1282031chr19_6757429_-SINEAluAluJb
CAediting_1282032chr19_6757432_-SINEAluAluJb
CAediting_1282033chr19_6757439_-SINEAluAluJb
CAediting_1282034chr19_6757446_-SINEAluAluJb
CAediting_1282035chr19_6757464_-SINEAluAluJb
CAediting_1282036chr19_6757700_-SINEAluAluSp
CAediting_1282037chr19_6757701_-SINEAluAluSp
CAediting_1282038chr19_6757710_-SINEAluAluSp
CAediting_1282039chr19_6757715_-SINEAluAluSp
CAediting_1282040chr19_6757719_-SINEAluAluSp
CAediting_1282041chr19_6757728_-SINEAluAluSp
CAediting_1282042chr19_6757740_-SINEAluAluSp
CAediting_1282043chr19_6757782_-SINEAluAluSp
CAediting_1282044chr19_6757821_-SINEAluAluSp
CAediting_1282045chr19_6757831_-SINEAluAluSp
CAediting_1282046chr19_6757834_-SINEAluAluSp
CAediting_1282047chr19_6757843_-SINEAluAluSp
CAediting_1282048chr19_6757860_-SINEAluAluSp
CAediting_1282049chr19_6757874_-SINEAluAluSp
CAediting_1282050chr19_6757880_-SINEAluAluSp
CAediting_1282051chr19_6757886_-SINEAluAluSp
CAediting_1282052chr19_6757904_-SINEAluAluSp
CAediting_1282053chr19_6757938_-SINEAluAluSp
CAediting_1282054chr19_6757940_-SINEAluAluSp
CAediting_1282055chr19_6758098_-SINEAluAluSz
CAediting_1282056chr19_6758099_-SINEAluAluSz
CAediting_1282057chr19_6758115_-SINEAluAluSz
CAediting_1282058chr19_6758125_-SINEAluAluSz
CAediting_1282059chr19_6758183_-SINEAluAluSz
CAediting_1282060chr19_6758184_-SINEAluAluSz
CAediting_1282061chr19_6758207_-SINEAluAluSz
CAediting_1282062chr19_6758230_-SINEAluAluSz
CAediting_1282063chr19_6758231_-SINEAluAluSz
CAediting_1282064chr19_6758253_-SINEAluAluSz
CAediting_1282065chr19_6758261_-SINEAluAluSz
CAediting_1282066chr19_6758323_-SINEAluAluSz6
CAediting_1282067chr19_6758329_-SINEAluAluSz6
CAediting_1282068chr19_6758331_-SINEAluAluSz6
CAediting_1282069chr19_6758332_-SINEAluAluSz6
CAediting_1282070chr19_6758354_-SINEAluAluSz6
CAediting_1282071chr19_6758361_-SINEAluAluSz6
CAediting_1282072chr19_6758379_-SINEAluAluSz6
CAediting_1282073chr19_6758390_-SINEAluAluSz6
CAediting_1282074chr19_6758391_-SINEAluAluSz6
CAediting_1282075chr19_6758399_-SINEAluAluSz6
CAediting_1282076chr19_6758405_-SINEAluAluSz6
CAediting_1282077chr19_6758415_-SINEAluAluSz6
CAediting_1282078chr19_6758440_-SINEAluAluSz6
CAediting_1282079chr19_6758441_-SINEAluAluSz6
CAediting_1282080chr19_6758449_-SINEAluAluSz6
CAediting_1282081chr19_6758467_-SINEAluAluSz6
CAediting_1282082chr19_6758474_-SINEAluAluSz6
CAediting_1282083chr19_6758485_-SINEAluAluSz6
CAediting_1282084chr19_6758506_-SINEAluAluSz6
CAediting_1282085chr19_6758519_-SINEAluAluSz6
CAediting_1282086chr19_6758530_-SINEAluAluSz6
CAediting_1282087chr19_6758535_-SINEAluAluSz6
CAediting_1282088chr19_6758540_-SINEAluAluSz6
CAediting_1282089chr19_6758554_-SINEAluAluSz6
CAediting_1282090chr19_6758560_-SINEAluAluSz6
CAediting_1282091chr19_6758575_-SINEAluAluSz6
CAediting_1282092chr19_6758576_-SINEAluAluSz6
CAediting_1282093chr19_6758592_-SINEAluAluSz6
CAediting_1282094chr19_6758598_-SINEAluAluSz6
CAediting_1282095chr19_6759142_-SINEAluAluSz
CAediting_1282096chr19_6759143_-SINEAluAluSz
CAediting_1282097chr19_6759146_-SINEAluAluSz
CAediting_1282098chr19_6759210_-SINEAluAluSz
CAediting_1282099chr19_6759211_-SINEAluAluSz
CAediting_1282100chr19_6759225_-SINEAluAluSz
CAediting_1282101chr19_6759251_-SINEAluAluSz
CAediting_1282102chr19_6759252_-SINEAluAluSz
CAediting_1282103chr19_6759262_-SINEAluAluSz
CAediting_1282104chr19_6759273_-SINEAluAluSz
CAediting_1282105chr19_6759278_-SINEAluAluSz
CAediting_1282106chr19_6759295_-SINEAluAluSz
CAediting_1282107chr19_6759306_-SINEAluAluSz
CAediting_1282108chr19_6759385_-SINEAluAluSz
CAediting_1282109chr19_6761703_-SINEAluAluSz6
CAediting_1282110chr19_6761718_-SINEAluAluSz6
CAediting_1282111chr19_6761730_-SINEAluAluSz6
CAediting_1282112chr19_6761731_-SINEAluAluSz6
CAediting_1282113chr19_6761745_-SINEAluAluSz6
CAediting_1282114chr19_6761776_-SINEAluAluSz6
CAediting_1282115chr19_6761794_-SINEAluAluSz6
CAediting_1282116chr19_6761817_-SINEAluAluSz6
CAediting_1282117chr19_6761935_-SINEAluAluSz6
CAediting_1282118chr19_6762289_-SINEAluAluSq2
CAediting_1282119chr19_6762328_-SINEAluAluSq2
CAediting_1282120chr19_6762332_-SINEAluAluSq2
CAediting_1282121chr19_6762348_-SINEAluAluSq2
CAediting_1282122chr19_6762352_-SINEAluAluSq2
CAediting_1282123chr19_6762378_-SINEAluAluSq2
CAediting_1282124chr19_6762416_-SINEAluAluSq2
CAediting_1282125chr19_6762417_-SINEAluAluSq2
CAediting_1282126chr19_6762422_-SINEAluAluSq2
CAediting_1282127chr19_6762449_-SINEAluAluSq2
CAediting_1282128chr19_6762604_-SINEAluAluJr
CAediting_1282129chr19_6762605_-SINEAluAluJr
CAediting_1282130chr19_6762638_-SINEAluAluJr
CAediting_1282131chr19_6762639_-SINEAluAluJr
CAediting_1282132chr19_6762655_-SINEAluAluJr
CAediting_1282133chr19_6762718_-SINEAluAluJr
CAediting_1282134chr19_6762765_-SINEAluAluJr
CAediting_1282135chr19_6763202_-SINEAluAluSz
CAediting_1282136chr19_6763212_-SINEAluAluSz
CAediting_1282137chr19_6763233_-SINEAluAluSz
CAediting_1282138chr19_6763234_-SINEAluAluSz
CAediting_1282139chr19_6763235_-SINEAluAluSz
CAediting_1282140chr19_6763237_-SINEAluAluSz
CAediting_1282141chr19_6763252_-SINEAluAluSz
CAediting_1282142chr19_6763257_-SINEAluAluSz
CAediting_1282143chr19_6763291_-SINEAluAluSz
CAediting_1282144chr19_6763295_-SINEAluAluSz
CAediting_1282145chr19_6763320_-SINEAluAluSz
CAediting_1282146chr19_6764024_-SINEAluAluSx
CAediting_1282147chr19_6764143_-SINEAluAluSx
CAediting_1282148chr19_6764161_-SINEAluAluSx
CAediting_1282149chr19_6764940_-SINEAluAluSx
CAediting_1282150chr19_6764949_-SINEAluAluSx
CAediting_1282151chr19_6764960_-SINEAluAluSx
CAediting_1282152chr19_6765016_-SINEAluAluSx
CAediting_1282153chr19_6765056_-SINEAluAluSx
CAediting_1282154chr19_6765057_-SINEAluAluSx
CAediting_1282155chr19_6765063_-SINEAluAluSx
CAediting_1282156chr19_6765069_-SINEAluAluSx
CAediting_1282157chr19_6765074_-SINEAluAluSx
CAediting_1282158chr19_6765075_-SINEAluAluSx
CAediting_1282159chr19_6765108_-SINEAluAluSx

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RNA A-to-I editing events in the alternative splicing sites for SH2D3A

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000125731.11.SH2D3A.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000125731.11.SH2D3A.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SH2D3A

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for SH2D3A

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for SH2D3A

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1281966chr19_6752226_-ENSG00000125731.11ENST00000437152hsa-miR-10396a-3p675222167522288mer-1a67522216752243145.00-22.60
CAediting_1281966chr19_6752226_-ENSG00000125731.11ENST00000437152hsa-miR-10396b-3p675222167522288mer-1a67522216752244145.00-21.19
CAediting_1281966chr19_6752226_-ENSG00000125731.11ENST00000437152hsa-miR-4707-5p675222367522297mer-m867522226752245146.00-29.28
CAediting_1281969chr19_6752241_-ENSG00000125731.11ENST00000437152hsa-miR-331-3p675224067522467mer-m867522396752260152.00-25.23
CAediting_1281971chr19_6752256_-ENSG00000125731.11ENST00000437152hsa-miR-4290675225367522597mer-m867522526752270161.00-26.43
CAediting_1281971chr19_6752256_-ENSG00000125731.11ENST00000437152hsa-miR-4667-3p675225467522607mer-m867522536752273164.00-27.25
CAediting_1281971chr19_6752256_-ENSG00000125731.11ENST00000437152hsa-miR-4687-5p675225267522587mer-m867522516752272167.00-27.90
CAediting_1281972chr19_6752290_-ENSG00000125731.11ENST00000437152hsa-miR-513a-5p675228967522957mer-m867522886752308146.00-17.09
CAediting_1281972chr19_6752290_-ENSG00000125731.11ENST00000437152hsa-miR-513a-5p675228967522957mer-m867522886752308146.00-17.09
CAediting_1281972chr19_6752290_-ENSG00000125731.11ENST00000437152hsa-miR-5694675228667522916mer67522856752305147.00-16.97

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1281972chr19_6752290_-ENSG00000125731.11ENST00000437152hsa-miR-10399-5p675228867522947mer-m867522876752304146-12.48
CAediting_1281966chr19_6752226_-ENSG00000125731.11ENST00000437152hsa-miR-3064-5p675222567522317mer-m867522246752244147-16.7
CAediting_1281966chr19_6752226_-ENSG00000125731.11ENST00000437152hsa-miR-3085-3p675222567522317mer-m867522246752245150-19.91
CAediting_1281970chr19_6752244_-ENSG00000125731.11ENST00000437152hsa-miR-3176675224367522497mer-m867522426752261152-18.99
CAediting_1281971chr19_6752256_-ENSG00000125731.11ENST00000437152hsa-miR-3614-3p675225267522587mer-m867522516752273140-20.4
CAediting_1281967chr19_6752233_-ENSG00000125731.11ENST00000437152hsa-miR-3663-5p675222967522357mer-m867522286752244141-19.69
CAediting_1281970chr19_6752244_-ENSG00000125731.11ENST00000437152hsa-miR-3922-3p675224367522497mer-m867522426752264153-20.84
CAediting_1281971chr19_6752256_-ENSG00000125731.11ENST00000437152hsa-miR-4297675225367522597mer-m867522526752266152-19.56
CAediting_1281969chr19_6752241_-ENSG00000125731.11ENST00000437152hsa-miR-4680-5p675223667522427mer-1a67522366752256144-18.39
CAediting_1281971chr19_6752256_-ENSG00000125731.11ENST00000437152hsa-miR-5581-5p675225367522597mer-m867522526752273140-18.96
CAediting_1281967chr19_6752233_-ENSG00000125731.11ENST00000437152hsa-miR-6131675222867522347mer-m867522276752245140-17.94
CAediting_1281972chr19_6752290_-ENSG00000125731.11ENST00000437152hsa-miR-6504-3p675228867522947mer-m867522876752306141-9.41
CAediting_1281966chr19_6752226_-ENSG00000125731.11ENST00000437152hsa-miR-6504-5p675222567522317mer-m867522246752244151-16.75
CAediting_1281970chr19_6752244_-ENSG00000125731.11ENST00000437152hsa-miR-6878-3p675224467522507mer-m867522436752265154-27.38
CAediting_1281972chr19_6752290_-ENSG00000125731.11ENST00000437152hsa-miR-7151-3p675228967522968mer-1a67522896752308149-17.78
CAediting_1281966chr19_6752226_-ENSG00000125731.11ENST00000437152hsa-miR-874-3p675222067522278mer-1a67522206752241150-21.82

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SH2D3A

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for SH2D3A

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for SH2D3A

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for SH2D3A

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for SH2D3A

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for SH2D3A

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource