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Editing gene: ATP8A2P1 (CAeditome ID:100422505)

Gene summary for ATP8A2P1

Gene summary

Gene information	Gene symbol	ATP8A2P1
	Gene ID	100422505
	Gene name	ATPase phospholipid transporting 8A2 pseudogene 1
	Synonyms	-
	Cytomap	10p11.21
	Type of gene	pseudo
	Description	ATPase, aminophospholipid transporter, class I, type 8A, member 2 pseudogene 1
	Modification date	20210518
	UniProtAcc	.
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for ATP8A2P1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000240800.1

RNA A-to-I editing events in Cancer.

CAediting_744740(37253707, +), CAediting_744741(37253773, +), CAediting_744742(37253777, +), CAediting_744743(37254864, +), CAediting_744744(37256382, +), CAediting_744745(37258775, +), CAediting_744746(37258776, +), CAediting_744747(37258779, +), CAediting_744748(37258816, +), CAediting_744749(37258824, +), CAediting_744750(37258842, +), CAediting_744751(37258852, +), CAediting_744752(37266815, +), CAediting_744753(37266818, +), CAediting_744754(37267091, +), CAediting_744755(37267144, +), CAediting_744756(37267145, +), CAediting_744757(37267234, +), CAediting_744758(37267506, +), CAediting_744759(37267527, +), CAediting_744760(37293062, +), CAediting_744761(37293086, +), CAediting_744762(37293135, +), CAediting_744763(37309395, +), CAediting_744764(37309403, +), CAediting_744765(37309415, +), CAediting_744766(37309421, +), CAediting_744767(37309439, +), CAediting_744768(37309445, +), CAediting_744769(37309481, +), CAediting_744770(37310190, +), CAediting_744771(37310215, +), CAediting_744772(37310222, +), CAediting_744773(37310244, +), CAediting_744774(37310278, +), CAediting_744775(37310283, +), CAediting_744776(37310289, +), CAediting_744777(37310293, +), CAediting_744778(37310300, +), CAediting_744779(37310303, +), CAediting_744780(37310306, +), CAediting_744781(37310332, +), CAediting_744782(37310333, +), CAediting_744783(37310342, +), CAediting_744784(37310355, +), CAediting_744785(37310378, +), CAediting_744786(37311881, +), CAediting_744787(37311886, +), CAediting_744788(37311887, +), CAediting_744789(37311900, +), CAediting_744790(37311910, +), CAediting_744791(37311911, +), CAediting_744792(37311934, +), CAediting_744793(37311948, +), CAediting_744794(37311956, +), CAediting_744795(37311960, +), CAediting_744796(37311970, +), CAediting_744797(37311996, +), CAediting_744798(37312006, +), CAediting_744799(37312015, +), CAediting_744800(37312017, +), CAediting_744801(37312021, +), CAediting_744802(37312091, +), CAediting_744803(37312092, +), CAediting_744804(37312095, +), CAediting_744805(37312956, +), CAediting_744806(37312969, +), CAediting_744807(37312976, +), CAediting_744808(37312993, +), CAediting_744809(37313005, +), CAediting_744810(37313057, +), CAediting_744811(37313060, +), CAediting_744812(37313111, +), CAediting_744813(37313112, +),

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RNA editing positional annotations for ATP8A2P1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_744740	chr10_37253707_+	ncRNA_intronic
CAediting_744741	chr10_37253773_+	ncRNA_intronic
CAediting_744742	chr10_37253777_+	ncRNA_intronic
CAediting_744743	chr10_37254864_+	ncRNA_intronic
CAediting_744744	chr10_37256382_+	ncRNA_intronic
CAediting_744745	chr10_37258775_+	ncRNA_intronic
CAediting_744746	chr10_37258776_+	ncRNA_intronic
CAediting_744747	chr10_37258779_+	ncRNA_intronic
CAediting_744748	chr10_37258816_+	ncRNA_intronic
CAediting_744749	chr10_37258824_+	ncRNA_intronic
CAediting_744750	chr10_37258842_+	ncRNA_intronic
CAediting_744751	chr10_37258852_+	ncRNA_intronic
CAediting_744752	chr10_37266815_+	ncRNA_intronic
CAediting_744753	chr10_37266818_+	ncRNA_intronic
CAediting_744754	chr10_37267091_+	ncRNA_intronic
CAediting_744755	chr10_37267144_+	ncRNA_intronic
CAediting_744756	chr10_37267145_+	ncRNA_intronic
CAediting_744757	chr10_37267234_+	ncRNA_intronic
CAediting_744758	chr10_37267506_+	ncRNA_intronic
CAediting_744759	chr10_37267527_+	ncRNA_intronic
CAediting_744760	chr10_37293062_+	ncRNA_intronic
CAediting_744761	chr10_37293086_+	ncRNA_intronic
CAediting_744762	chr10_37293135_+	ncRNA_intronic
CAediting_744763	chr10_37309395_+	ncRNA_intronic
CAediting_744764	chr10_37309403_+	ncRNA_intronic
CAediting_744765	chr10_37309415_+	ncRNA_intronic
CAediting_744766	chr10_37309421_+	ncRNA_intronic
CAediting_744767	chr10_37309439_+	ncRNA_intronic
CAediting_744768	chr10_37309445_+	ncRNA_intronic
CAediting_744769	chr10_37309481_+	ncRNA_intronic
CAediting_744770	chr10_37310190_+	ncRNA_intronic
CAediting_744771	chr10_37310215_+	ncRNA_intronic
CAediting_744772	chr10_37310222_+	ncRNA_intronic
CAediting_744773	chr10_37310244_+	ncRNA_intronic
CAediting_744774	chr10_37310278_+	ncRNA_intronic
CAediting_744775	chr10_37310283_+	ncRNA_intronic
CAediting_744776	chr10_37310289_+	ncRNA_intronic
CAediting_744777	chr10_37310293_+	ncRNA_intronic
CAediting_744778	chr10_37310300_+	ncRNA_intronic
CAediting_744779	chr10_37310303_+	ncRNA_intronic
CAediting_744780	chr10_37310306_+	ncRNA_intronic
CAediting_744781	chr10_37310332_+	ncRNA_intronic
CAediting_744782	chr10_37310333_+	ncRNA_intronic
CAediting_744783	chr10_37310342_+	ncRNA_intronic
CAediting_744784	chr10_37310355_+	ncRNA_intronic
CAediting_744785	chr10_37310378_+	ncRNA_intronic
CAediting_744786	chr10_37311881_+	ncRNA_intronic
CAediting_744787	chr10_37311886_+	ncRNA_intronic
CAediting_744788	chr10_37311887_+	ncRNA_intronic
CAediting_744789	chr10_37311900_+	ncRNA_intronic
CAediting_744790	chr10_37311910_+	ncRNA_intronic
CAediting_744791	chr10_37311911_+	ncRNA_intronic
CAediting_744792	chr10_37311934_+	ncRNA_intronic
CAediting_744793	chr10_37311948_+	ncRNA_intronic
CAediting_744794	chr10_37311956_+	ncRNA_intronic
CAediting_744795	chr10_37311960_+	ncRNA_intronic
CAediting_744796	chr10_37311970_+	ncRNA_intronic
CAediting_744797	chr10_37311996_+	ncRNA_intronic
CAediting_744798	chr10_37312006_+	ncRNA_intronic
CAediting_744799	chr10_37312015_+	ncRNA_intronic
CAediting_744800	chr10_37312017_+	ncRNA_intronic
CAediting_744801	chr10_37312021_+	ncRNA_intronic
CAediting_744802	chr10_37312091_+	ncRNA_intronic
CAediting_744803	chr10_37312092_+	ncRNA_intronic
CAediting_744804	chr10_37312095_+	ncRNA_intronic
CAediting_744805	chr10_37312956_+	ncRNA_intronic
CAediting_744806	chr10_37312969_+	ncRNA_intronic
CAediting_744807	chr10_37312976_+	ncRNA_intronic
CAediting_744808	chr10_37312993_+	ncRNA_intronic
CAediting_744809	chr10_37313005_+	ncRNA_intronic
CAediting_744810	chr10_37313057_+	ncRNA_intronic
CAediting_744811	chr10_37313060_+	ncRNA_intronic
CAediting_744812	chr10_37313111_+	ncRNA_intronic
CAediting_744813	chr10_37313112_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_744740	chr10_37253707_+	SINE	Alu	AluY
CAediting_744741	chr10_37253773_+	SINE	Alu	AluY
CAediting_744742	chr10_37253777_+	SINE	Alu	AluY
CAediting_744743	chr10_37254864_+	SINE	Alu	AluY
CAediting_744744	chr10_37256382_+	SINE	Alu	AluJo
CAediting_744745	chr10_37258775_+	SINE	Alu	AluSc8
CAediting_744746	chr10_37258776_+	SINE	Alu	AluSc8
CAediting_744747	chr10_37258779_+	SINE	Alu	AluSc8
CAediting_744748	chr10_37258816_+	SINE	Alu	AluSc8
CAediting_744749	chr10_37258824_+	SINE	Alu	AluSc8
CAediting_744750	chr10_37258842_+	SINE	Alu	AluSc8
CAediting_744751	chr10_37258852_+	SINE	Alu	AluSc8
CAediting_744752	chr10_37266815_+	SINE	Alu	AluSx
CAediting_744753	chr10_37266818_+	SINE	Alu	AluSx
CAediting_744754	chr10_37267091_+	SINE	Alu	AluSq2
CAediting_744755	chr10_37267144_+	SINE	Alu	AluSq2
CAediting_744756	chr10_37267145_+	SINE	Alu	AluSq2
CAediting_744757	chr10_37267234_+	SINE	Alu	AluSq2
CAediting_744758	chr10_37267506_+	SINE	Alu	AluSq2
CAediting_744759	chr10_37267527_+	SINE	Alu	AluSq2
CAediting_744760	chr10_37293062_+	SINE	Alu	AluSg4
CAediting_744761	chr10_37293086_+	SINE	Alu	AluSg4
CAediting_744762	chr10_37293135_+	SINE	Alu	AluSg4
CAediting_744763	chr10_37309395_+	SINE	Alu	AluJr4
CAediting_744764	chr10_37309403_+	SINE	Alu	AluJr4
CAediting_744765	chr10_37309415_+	SINE	Alu	AluJr4
CAediting_744766	chr10_37309421_+	SINE	Alu	AluJr4
CAediting_744767	chr10_37309439_+	SINE	Alu	AluJr4
CAediting_744768	chr10_37309445_+	SINE	Alu	AluJr4
CAediting_744769	chr10_37309481_+	SINE	Alu	AluJr4
CAediting_744770	chr10_37310190_+	SINE	Alu	AluSx1
CAediting_744771	chr10_37310215_+	SINE	Alu	AluSx1
CAediting_744772	chr10_37310222_+	SINE	Alu	AluSx1
CAediting_744773	chr10_37310244_+	SINE	Alu	AluSx1
CAediting_744774	chr10_37310278_+	SINE	Alu	AluSx1
CAediting_744775	chr10_37310283_+	SINE	Alu	AluSx1
CAediting_744776	chr10_37310289_+	SINE	Alu	AluSx1
CAediting_744777	chr10_37310293_+	SINE	Alu	AluSx1
CAediting_744778	chr10_37310300_+	SINE	Alu	AluSx1
CAediting_744779	chr10_37310303_+	SINE	Alu	AluSx1
CAediting_744780	chr10_37310306_+	SINE	Alu	AluSx1
CAediting_744781	chr10_37310332_+	SINE	Alu	AluSx1
CAediting_744782	chr10_37310333_+	SINE	Alu	AluSx1
CAediting_744783	chr10_37310342_+	SINE	Alu	AluSx1
CAediting_744784	chr10_37310355_+	SINE	Alu	AluSx1
CAediting_744785	chr10_37310378_+	SINE	Alu	AluSx1
CAediting_744786	chr10_37311881_+	SINE	Alu	AluSx3
CAediting_744787	chr10_37311886_+	SINE	Alu	AluSx3
CAediting_744788	chr10_37311887_+	SINE	Alu	AluSx3
CAediting_744789	chr10_37311900_+	SINE	Alu	AluSx3
CAediting_744790	chr10_37311910_+	SINE	Alu	AluSx3
CAediting_744791	chr10_37311911_+	SINE	Alu	AluSx3
CAediting_744792	chr10_37311934_+	SINE	Alu	AluSx3
CAediting_744793	chr10_37311948_+	SINE	Alu	AluSx3
CAediting_744794	chr10_37311956_+	SINE	Alu	AluSx3
CAediting_744795	chr10_37311960_+	SINE	Alu	AluSx3
CAediting_744796	chr10_37311970_+	SINE	Alu	AluSx3
CAediting_744797	chr10_37311996_+	SINE	Alu	AluSx3
CAediting_744798	chr10_37312006_+	SINE	Alu	AluSx3
CAediting_744799	chr10_37312015_+	SINE	Alu	AluSx3
CAediting_744800	chr10_37312017_+	SINE	Alu	AluSx3
CAediting_744801	chr10_37312021_+	SINE	Alu	AluSx3
CAediting_744802	chr10_37312091_+	SINE	Alu	AluSx3
CAediting_744803	chr10_37312092_+	SINE	Alu	AluSx3
CAediting_744804	chr10_37312095_+	SINE	Alu	AluSx3
CAediting_744805	chr10_37312956_+	SINE	Alu	AluSz
CAediting_744806	chr10_37312969_+	SINE	Alu	AluSz
CAediting_744807	chr10_37312976_+	SINE	Alu	AluSz
CAediting_744808	chr10_37312993_+	SINE	Alu	AluSz
CAediting_744809	chr10_37313005_+	SINE	Alu	AluSz
CAediting_744810	chr10_37313057_+	SINE	Alu	AluSz
CAediting_744811	chr10_37313060_+	SINE	Alu	AluSz
CAediting_744812	chr10_37313111_+	SINE	Alu	AluSz
CAediting_744813	chr10_37313112_+	SINE	Alu	AluSz

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RNA A-to-I editing events in the alternative splicing sites for ATP8A2P1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000240800.1.ATP8A2P1.

Correlation between RNA A-to-I editing and PSI for ENSG00000240800.1.ATP8A2P1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ATP8A2P1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ATP8A2P1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ATP8A2P1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ATP8A2P1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for ATP8A2P1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_744794	chr10_37311956_+	0.00390305361244659	0.273029861800515	.	.	.	.

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Relation with cancer stages for ATP8A2P1

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BRCA	pathologic_stage	CAediting_744789	chr10_37311900_+	0.0177435522023358	0.321546296859282
BRCA	pathologic_stage	CAediting_744792	chr10_37311934_+	0.0199035088842471	0.215945935619529

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Relation with survival for ATP8A2P1

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
BRCA	CAediting_744793	chr10_37311948_+	0.00187439032706593	0.000326503	1048.01
BRCA	CAediting_744799	chr10_37312015_+	0.0470899677892619	0.0104592	656707

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RelatedDrugs for ATP8A2P1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ATP8A2P1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene