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Editing gene: LINC00887 (CAeditome ID:100131551)

Gene summary for LINC00887

Gene summary

Gene information	Gene symbol	LINC00887
	Gene ID	100131551
	Gene name	long intergenic non-protein coding RNA 887
	Synonyms	HEIRCC
	Cytomap	3q29
	Type of gene	ncRNA
	Description	high-expressed in renal cell carcinomalinc-ATP13A4-8
	Modification date	20210524
	UniProtAcc	.
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for LINC00887

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000214145.5

RNA A-to-I editing events in Cancer.

CAediting_334656(194297701, -), CAediting_334657(194297740, -), CAediting_334658(194297759, -), CAediting_334659(194297765, -), CAediting_334660(194297776, -), CAediting_334661(194297782, -), CAediting_334662(194297804, -), CAediting_334663(194297808, -), CAediting_334664(194297873, -), CAediting_334665(194297883, -), CAediting_334666(194297892, -), CAediting_334667(194297919, -), CAediting_334668(194298104, -), CAediting_334669(194298119, -), CAediting_334670(194298126, -), CAediting_334671(194298131, -), CAediting_334672(194298140, -), CAediting_334673(194298143, -), CAediting_334674(194298144, -), CAediting_334675(194298156, -), CAediting_334676(194298167, -), CAediting_334677(194298178, -), CAediting_334678(194298195, -), CAediting_334679(194298228, -), CAediting_334680(194298236, -), CAediting_334681(194298238, -), CAediting_334682(194298241, -), CAediting_334683(194298243, -), CAediting_334684(194298244, -), CAediting_334685(194298260, -), CAediting_334686(194298273, -), CAediting_334687(194298274, -), CAediting_334688(194298277, -), CAediting_334689(194298308, -), CAediting_334690(194298327, -), CAediting_334691(194298329, -), CAediting_334692(194299283, -), CAediting_334693(194299367, -), CAediting_334694(194299374, -), CAediting_334695(194299381, -), CAediting_334696(194299385, -), CAediting_334697(194299387, -), CAediting_334698(194299391, -), CAediting_334699(194299404, -), CAediting_334700(194299417, -), CAediting_334701(194299421, -), CAediting_334702(194299426, -), CAediting_334703(194299453, -), CAediting_334704(194299461, -), CAediting_334705(194299489, -), CAediting_334706(194299491, -), CAediting_334707(194299492, -), CAediting_334708(194299495, -), CAediting_334709(194299519, -), CAediting_334710(194299522, -), CAediting_334711(194299525, -), CAediting_334712(194299539, -), CAediting_334713(194299560, -), CAediting_334714(194299583, -), CAediting_334715(194299646, -), CAediting_334716(194302889, -), CAediting_334717(194302958, -), CAediting_334718(194302995, -), CAediting_334719(194304694, -), CAediting_334720(194304734, -), CAediting_334721(194304762, -), CAediting_334722(194304780, -), CAediting_334723(194304824, -), CAediting_334724(194304838, -), CAediting_334725(194304906, -), CAediting_334726(194304937, -),

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RNA editing positional annotations for LINC00887 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_334656	chr3_194297701_-	ncRNA_intronic
CAediting_334657	chr3_194297740_-	ncRNA_intronic
CAediting_334658	chr3_194297759_-	ncRNA_intronic
CAediting_334659	chr3_194297765_-	ncRNA_intronic
CAediting_334660	chr3_194297776_-	ncRNA_intronic
CAediting_334661	chr3_194297782_-	ncRNA_intronic
CAediting_334662	chr3_194297804_-	ncRNA_intronic
CAediting_334663	chr3_194297808_-	ncRNA_intronic
CAediting_334664	chr3_194297873_-	ncRNA_intronic
CAediting_334665	chr3_194297883_-	ncRNA_intronic
CAediting_334666	chr3_194297892_-	ncRNA_intronic
CAediting_334667	chr3_194297919_-	ncRNA_intronic
CAediting_334668	chr3_194298104_-	ncRNA_intronic
CAediting_334669	chr3_194298119_-	ncRNA_intronic
CAediting_334670	chr3_194298126_-	ncRNA_intronic
CAediting_334671	chr3_194298131_-	ncRNA_intronic
CAediting_334672	chr3_194298140_-	ncRNA_intronic
CAediting_334673	chr3_194298143_-	ncRNA_intronic
CAediting_334674	chr3_194298144_-	ncRNA_intronic
CAediting_334675	chr3_194298156_-	ncRNA_intronic
CAediting_334676	chr3_194298167_-	ncRNA_intronic
CAediting_334677	chr3_194298178_-	ncRNA_intronic
CAediting_334678	chr3_194298195_-	ncRNA_intronic
CAediting_334679	chr3_194298228_-	ncRNA_intronic
CAediting_334680	chr3_194298236_-	ncRNA_intronic
CAediting_334681	chr3_194298238_-	ncRNA_intronic
CAediting_334682	chr3_194298241_-	ncRNA_intronic
CAediting_334683	chr3_194298243_-	ncRNA_intronic
CAediting_334684	chr3_194298244_-	ncRNA_intronic
CAediting_334685	chr3_194298260_-	ncRNA_intronic
CAediting_334686	chr3_194298273_-	ncRNA_intronic
CAediting_334687	chr3_194298274_-	ncRNA_intronic
CAediting_334688	chr3_194298277_-	ncRNA_intronic
CAediting_334689	chr3_194298308_-	ncRNA_intronic
CAediting_334690	chr3_194298327_-	ncRNA_intronic
CAediting_334691	chr3_194298329_-	ncRNA_intronic
CAediting_334692	chr3_194299283_-	ncRNA_intronic
CAediting_334693	chr3_194299367_-	ncRNA_intronic
CAediting_334694	chr3_194299374_-	ncRNA_intronic
CAediting_334695	chr3_194299381_-	ncRNA_intronic
CAediting_334696	chr3_194299385_-	ncRNA_intronic
CAediting_334697	chr3_194299387_-	ncRNA_intronic
CAediting_334698	chr3_194299391_-	ncRNA_intronic
CAediting_334699	chr3_194299404_-	ncRNA_intronic
CAediting_334700	chr3_194299417_-	ncRNA_intronic
CAediting_334701	chr3_194299421_-	ncRNA_intronic
CAediting_334702	chr3_194299426_-	ncRNA_intronic
CAediting_334703	chr3_194299453_-	ncRNA_intronic
CAediting_334704	chr3_194299461_-	ncRNA_intronic
CAediting_334705	chr3_194299489_-	ncRNA_intronic
CAediting_334706	chr3_194299491_-	ncRNA_intronic
CAediting_334707	chr3_194299492_-	ncRNA_intronic
CAediting_334708	chr3_194299495_-	ncRNA_intronic
CAediting_334709	chr3_194299519_-	ncRNA_intronic
CAediting_334710	chr3_194299522_-	ncRNA_intronic
CAediting_334711	chr3_194299525_-	ncRNA_intronic
CAediting_334712	chr3_194299539_-	ncRNA_intronic
CAediting_334713	chr3_194299560_-	ncRNA_intronic
CAediting_334714	chr3_194299583_-	ncRNA_intronic
CAediting_334715	chr3_194299646_-	ncRNA_exonic
CAediting_334716	chr3_194302889_-	ncRNA_exonic
CAediting_334717	chr3_194302958_-	ncRNA_exonic
CAediting_334718	chr3_194302995_-	ncRNA_exonic
CAediting_334719	chr3_194304694_-	ncRNA_intronic
CAediting_334720	chr3_194304734_-	ncRNA_intronic
CAediting_334721	chr3_194304762_-	ncRNA_intronic
CAediting_334722	chr3_194304780_-	ncRNA_intronic
CAediting_334723	chr3_194304824_-	ncRNA_intronic
CAediting_334724	chr3_194304838_-	ncRNA_intronic
CAediting_334725	chr3_194304906_-	ncRNA_intronic
CAediting_334726	chr3_194304937_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_334656	chr3_194297701_-	SINE	Alu	AluSx
CAediting_334657	chr3_194297740_-	SINE	Alu	AluSx
CAediting_334658	chr3_194297759_-	SINE	Alu	AluSx
CAediting_334659	chr3_194297765_-	SINE	Alu	AluSx
CAediting_334660	chr3_194297776_-	SINE	Alu	AluSx
CAediting_334661	chr3_194297782_-	SINE	Alu	AluSx
CAediting_334662	chr3_194297804_-	SINE	Alu	AluSx
CAediting_334663	chr3_194297808_-	SINE	Alu	AluSx
CAediting_334664	chr3_194297873_-	SINE	Alu	AluSx
CAediting_334665	chr3_194297883_-	SINE	Alu	AluSx
CAediting_334666	chr3_194297892_-	SINE	Alu	AluSx
CAediting_334667	chr3_194297919_-	SINE	Alu	AluSx
CAediting_334668	chr3_194298104_-	SINE	Alu	AluJr
CAediting_334669	chr3_194298119_-	SINE	Alu	AluJr
CAediting_334670	chr3_194298126_-	SINE	Alu	AluJr
CAediting_334671	chr3_194298131_-	SINE	Alu	AluJr
CAediting_334672	chr3_194298140_-	SINE	Alu	AluJr
CAediting_334673	chr3_194298143_-	SINE	Alu	AluJr
CAediting_334674	chr3_194298144_-	SINE	Alu	AluJr
CAediting_334675	chr3_194298156_-	SINE	Alu	AluJr
CAediting_334676	chr3_194298167_-	SINE	Alu	AluJr
CAediting_334677	chr3_194298178_-	SINE	Alu	AluJr
CAediting_334678	chr3_194298195_-	SINE	Alu	AluJr
CAediting_334679	chr3_194298228_-	SINE	Alu	AluJr
CAediting_334680	chr3_194298236_-	SINE	Alu	AluJr
CAediting_334681	chr3_194298238_-	SINE	Alu	AluJr
CAediting_334682	chr3_194298241_-	SINE	Alu	AluJr
CAediting_334683	chr3_194298243_-	SINE	Alu	AluJr
CAediting_334684	chr3_194298244_-	SINE	Alu	AluJr
CAediting_334685	chr3_194298260_-	SINE	Alu	AluJr
CAediting_334686	chr3_194298273_-	SINE	Alu	AluJr
CAediting_334687	chr3_194298274_-	SINE	Alu	AluJr
CAediting_334688	chr3_194298277_-	SINE	Alu	AluJr
CAediting_334689	chr3_194298308_-	SINE	Alu	AluJr
CAediting_334690	chr3_194298327_-	SINE	Alu	AluJr
CAediting_334691	chr3_194298329_-	SINE	Alu	AluJr
CAediting_334692	chr3_194299283_-	SINE	Alu	AluSp
CAediting_334693	chr3_194299367_-	SINE	Alu	AluSp
CAediting_334694	chr3_194299374_-	SINE	Alu	AluSp
CAediting_334695	chr3_194299381_-	SINE	Alu	AluSp
CAediting_334696	chr3_194299385_-	SINE	Alu	AluSp
CAediting_334697	chr3_194299387_-	SINE	Alu	AluSp
CAediting_334698	chr3_194299391_-	SINE	Alu	AluSp
CAediting_334699	chr3_194299404_-	SINE	Alu	AluSp
CAediting_334700	chr3_194299417_-	SINE	Alu	AluSp
CAediting_334701	chr3_194299421_-	SINE	Alu	AluSp
CAediting_334702	chr3_194299426_-	SINE	Alu	AluSp
CAediting_334703	chr3_194299453_-	SINE	Alu	AluSp
CAediting_334704	chr3_194299461_-	SINE	Alu	AluSp
CAediting_334705	chr3_194299489_-	SINE	Alu	AluSp
CAediting_334706	chr3_194299491_-	SINE	Alu	AluSp
CAediting_334707	chr3_194299492_-	SINE	Alu	AluSp
CAediting_334708	chr3_194299495_-	SINE	Alu	AluSp
CAediting_334709	chr3_194299519_-	SINE	Alu	AluSp
CAediting_334710	chr3_194299522_-	SINE	Alu	AluSp
CAediting_334711	chr3_194299525_-	SINE	Alu	AluSp
CAediting_334712	chr3_194299539_-	SINE	Alu	AluSp
CAediting_334713	chr3_194299560_-	SINE	Alu	AluSp
CAediting_334714	chr3_194299583_-	SINE	Alu	AluSp
CAediting_334715	chr3_194299646_-	SINE	Alu	AluY
CAediting_334716	chr3_194302889_-	SINE	Alu	AluY
CAediting_334717	chr3_194302958_-	SINE	Alu	AluY
CAediting_334718	chr3_194302995_-	SINE	Alu	AluY
CAediting_334719	chr3_194304694_-	SINE	Alu	AluJb
CAediting_334720	chr3_194304734_-	SINE	Alu	AluJb
CAediting_334721	chr3_194304762_-	SINE	Alu	AluJb
CAediting_334722	chr3_194304780_-	SINE	Alu	AluJb
CAediting_334723	chr3_194304824_-	SINE	Alu	AluJb
CAediting_334724	chr3_194304838_-	SINE	Alu	AluJb
CAediting_334725	chr3_194304906_-	SINE	Alu	AluJb
CAediting_334726	chr3_194304937_-	SINE	Alu	AluJb

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RNA A-to-I editing events in the alternative splicing sites for LINC00887

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000214145.5.LINC00887.

Correlation between RNA A-to-I editing and PSI for ENSG00000214145.5.LINC00887.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for LINC00887

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for LINC00887

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for LINC00887

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_334716	chr3_194302889_-	ENSG00000214145.5	ENST00000414120.1	hsa-miR-181a-2-3p	194302887	194302894	8mer-1a	194302887	194302908	140	-11.24
CAediting_334716	chr3_194302889_-	ENSG00000214145.5	ENST00000414120.1	hsa-miR-6509-3p	194302887	194302893	7mer-m8	194302886	194302907	155	-13.8
CAediting_334718	chr3_194302995_-	ENSG00000214145.5	ENST00000414120.1	hsa-miR-17-3p	194302995	194303001	7mer-m8	194302994	194303016	157	-19.86
CAediting_334718	chr3_194302995_-	ENSG00000214145.5	ENST00000414120.1	hsa-miR-596	194302992	194302998	7mer-m8	194302991	194303011	140	-17.7

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_334715	chr3_194299646_-	ENSG00000214145.5	ENST00000429578.4	hsa-miR-924	194299641	194299647	7mer-m8	194299640	194299659	155	-21.4
CAediting_334717	chr3_194302958_-	ENSG00000214145.5	ENST00000414120.1	hsa-miR-4478	194302954	194302960	7mer-m8	194302953	194302968	149	-25.05
CAediting_334717	chr3_194302958_-	ENSG00000214145.5	ENST00000414120.1	hsa-miR-6765-5p	194302958	194302963	6mer	194302957	194302978	147	-27.8
CAediting_334717	chr3_194302958_-	ENSG00000214145.5	ENST00000414120.1	hsa-miR-7160-5p	194302956	194302962	7mer-m8	194302955	194302974	149	-19.16

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000214145.5	ENST00000429578.4	hsa-miR-605-3p	194303398	194303404	7mer-m8	194303397	194303419	148	-16.19
CAediting_748296	chr10_51299626_+	ENSG00000214145.5	ENST00000414120.1	hsa-miR-605-3p	194303398	194303404	7mer-m8	194303397	194303419	148	-16.19
CAediting_393	chr1_1167164_+	ENSG00000214145.5	ENST00000414120.1	hsa-miR-200b-3p	194301226	194301232	7mer-m8	194301225	194301246	141	-8.5
CAediting_688081	chr9_63819627_+	ENSG00000214145.5	ENST00000414120.1	hsa-miR-4477b	194302812	194302818	7mer-m8	194302811	194302832	140	-11.37
CAediting_688081	chr9_63819627_+	ENSG00000214145.5	ENST00000414120.1	hsa-miR-4477b	194302722	194302728	7mer-m8	194302721	194302744	147	-14.89
CAediting_688081	chr9_63819627_+	ENSG00000214145.5	ENST00000414120.1	hsa-miR-4477b	194301778	194301785	8mer-1a	194301778	194301802	159	-21.92
CAediting_86358	chr1_109598906_+	ENSG00000214145.5	ENST00000429578.4	hsa-miR-197-5p	194312761	194312768	8mer-1a	194312761	194312788	146	-26.59
CAediting_228905	chr2_188297554_+	ENSG00000214145.5	ENST00000429578.4	hsa-miR-561-3p	194303687	194303692	6mer	194303686	194303713	140	-15.61
CAediting_524911	chr7_5495852_-	ENSG00000214145.5	ENST00000429578.4	hsa-miR-589-3p	194312721	194312727	7mer-m8	194312720	194312744	146	-17.86
CAediting_1229414	chr17_67471546_+	ENSG00000214145.5	ENST00000414120.1	hsa-miR-548aa	194302853	194302859	7mer-m8	194302852	194302876	140	-12.7
CAediting_1368054	chr19_46709310_-	ENSG00000214145.5	ENST00000414120.1	hsa-miR-320e	194302909	194302916	8mer-1a	194302909	194302927	151	-19.77
CAediting_86358	chr1_109598906_+	ENSG00000214145.5	ENST00000414120.1	hsa-miR-197-5p	194312761	194312768	8mer-1a	194312761	194312788	146	-26.59
CAediting_228905	chr2_188297554_+	ENSG00000214145.5	ENST00000414120.1	hsa-miR-561-3p	194303687	194303692	6mer	194303686	194303713	140	-15.61
CAediting_524911	chr7_5495852_-	ENSG00000214145.5	ENST00000414120.1	hsa-miR-589-3p	194302661	194302667	7mer-m8	194302660	194302685	147	-12.83
CAediting_524911	chr7_5495852_-	ENSG00000214145.5	ENST00000414120.1	hsa-miR-589-3p	194312721	194312727	7mer-m8	194312720	194312744	146	-17.86
CAediting_468389	chr6_31355314_-	ENSG00000214145.5	ENST00000429578.4	hsa-miR-6891-5p	194306021	194306027	7mer-m8	194306020	194312611	148	-16.95
CAediting_468389	chr6_31355314_-	ENSG00000214145.5	ENST00000414120.1	hsa-miR-6891-5p	194306021	194306027	7mer-m8	194306020	194312611	148	-16.95
CAediting_468389	chr6_31355314_-	ENSG00000214145.5	ENST00000414120.1	hsa-miR-6891-5p	194303143	194303148	6mer	194303142	194303160	145	-25.03

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000214145.5	ENST00000429578.4	hsa-miR-624-3p	194300459	194300465	7mer-m8	194300458	194300478	147	-15.03
CAediting_688081	chr9_63819627_+	ENSG00000214145.5	ENST00000414120.1	hsa-miR-4477b	194302185	194302192	8mer-1a	194302185	194302206	152	-11.42
CAediting_688081	chr9_63819627_+	ENSG00000214145.5	ENST00000414120.1	hsa-miR-4477b	194301345	194301352	8mer-1a	194301345	194301367	147	-11.29
CAediting_748296	chr10_51299626_+	ENSG00000214145.5	ENST00000414120.1	hsa-miR-605-3p	194303295	194303302	8mer-1a	194303295	194303317	151	-13.45
CAediting_468389	chr6_31355314_-	ENSG00000214145.5	ENST00000414120.1	hsa-miR-6891-5p	194301746	194301753	8mer-1a	194301746	194301765	152	-24.96
CAediting_468389	chr6_31355314_-	ENSG00000214145.5	ENST00000414120.1	hsa-miR-6891-5p	194301688	194301694	7mer-m8	194301687	194301705	150	-16.36

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for LINC00887

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000429578.4	lincRNA
ENST00000414120.1	lincRNA

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_334715	ENST00000429578.4	chr3_194299646_-	-603.20	-597.00	-603.20
CAediting_334716	ENST00000414120.1	chr3_194302889_-	-881.90	-879.40	-884.10
CAediting_334717	ENST00000414120.1	chr3_194302958_-	-884.10	-879.40	-884.10
CAediting_334718	ENST00000414120.1	chr3_194302995_-	-879.40	-879.40	-884.10

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Relation with ADAR for LINC00887

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for LINC00887

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
KIRC	pathologic_stage	CAediting_334691	chr3_194298329_-	0.0305869623524477	0.24991382926559

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Relation with survival for LINC00887

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for LINC00887

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for LINC00887

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene