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lncRNA: ENSG00000276649 |
Summary for RP5-858L17.1 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000276649 | Gene symbol | RP5-858L17.1 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | antisense | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for RP5-858L17.1 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000276649 | 1.027487e+02 | -1.217940e+00 | 3.378478e-01 | -3.604996e+00 | 3.121580e-04 | 1.355159e-03 | DOWN | GBM |
| ENSG00000276649 | 1.722046e+02 | 2.743167e+00 | 1.506003e-01 | 1.821488e+01 | 3.930000e-74 | 2.260000e-72 | UP | KIRC |
| ENSG00000276649 | 8.642653e+01 | 1.727679e+00 | 1.663708e-01 | 1.038451e+01 | 2.920000e-25 | 1.200000e-23 | UP | KIRP |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000276649 | 3.694582e-01 | 4.228006e-21 | KIRC | 4.078732e-20 |
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lncRNA-Protein interaction for RP5-858L17.1 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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