 lncRNA targets the enhancer region and positively regulates the gene expression. |
| Only predicted by TDF | | EEF1AKMT3,RPAP2,ARHGEF1,B3GNTL1,ARL16,VAMP1,EPOR,TCEA2,ERI2,ARFIP2,PRPSAP2,CTF1,TBC1D24,MFSD8,KRT10,ABHD17A,ANTKMT,BRD7,TMEM234,TXNL4B,BRD1,CIRBP,KIFC3,PET100,DYNC2LI1,PCGF1,MZF1,SART1,C1orf56,SHARPIN,SIRT3,CFAP20,MAPK8IP3,LYSMD4,SRP19,TMUB1,SUGP2,VAMP4,PPP2R3B,N4BP2L2,BCS1L,DMTF1,L3HYPDH,CTU1,ACD,FAM193A,UNKL,PHF10,XAB2,PIGG,B3GAT3,GPCPD1,TRAPPC12,HSDL1,ULK3,VMP1,ZFP14,CENATAC,WDR5B,SNRPA,ST7L,SAFB2,KCTD13,APTX,MSANTD2,TRAPPC2L,TUBGCP6,CCDC14,FAM200A,CHKA,LZTFL1,FAAP20,CLK4,C6orf136,COA3,SURF2,TERF2IP,ZBED5,EIF2B5,PPIH,RABGGTB,TTC14,TRIP10,CCDC8,SLC2A11,SVBP,GATD1,GKAP1,SPRN,TAZ,SUGP1,SPG7,NAA80,FAM104B,C19orf44,SRSF4,SIAH1,GTF2H5,USE1,SCYL3,CLCN6,ECHDC2,OGT,RCCD1,CCNB1IP1,CYB5D2,SCML1,TMEM198,TMEM208,ZFP1,BAIAP2L2,IGIP,RAB4B,RFX2,COX19,ERAL1,CLK2,MYEF2,BRSK1,TARBP2,CA11,ILKAP,MPLKIP,POLG2,DHX34,NFIA,TUT4,RING1,ENSA,CHKB,IFT81,METTL17,RIC8B,BBIP1,SNHG32,CBY1,WDR83,OSGEP,USF1,ACAD10,CTC1,CLK1,MRRF,SAMD11,ITGB3BP,GABPB1,H3-3A,ANKRD39,RABL2A,DHPS,RPAIN,MPST,OFD1,VPS36,CARS2,ACYP1,INTS6,SLC25A29,FCHSD1,PIH1D1,IFT172,ELMO3,CFAP298,XPNPEP3,GAR1,MIS12,DERL2,TSSC4,B3GALT6,RSRC2,PGAP3,CAMKMT,PFDN6,NAPB,C3orf62,ZADH2,CBX7,SETD5,ZFP62,C17orf97,ALKBH2,C9orf72,ZBED8,ORMDL1,CHD9,DHODH,YTHDC1,LPAR2,COQ7,C18orf21,SH2D3A,C22orf39,MCAT,COQ6,C12orf73,DDX51,AGER,AGO3,FUZ,ESS2,PIGZ,SSBP2,PRPF38A,SPOUT1,C1orf52,CUL9,CDK11A,MTLN,FBXW4,PASK,TSEN54,LRRC37B,DHX35,ABHD16A,ATG4B,SUPT20H,PAFAH1B3,CCDC191,LMNTD2,ADHFE1,NXF1,DCUN1D2,EIF2B1,KIF9,UQCC1,NR2C2,PAN2,IL17RC,FAM229A,LRTOMT,PFDN5,CCDC159,MOAP1,HMGN3,EBPL,FAM193B,PPT2,NDUFB1,PNKP,TMCO6,NOL3,SLC25A28,STK25,COG7,SEC31B,CZIB,RABL6,ATG2B,CIR1,ZFC3H1,PDRG1,KLHL17,NFYB,ARHGAP33,MBTD1,DMAC2L,N4BP2L1,ELOF1,LNP1,DNASE1,SEPSECS,HEXD,IRX3,IFT122,SDHAF2,HDAC8,GAS8,IDH3B,VCPKMT,TMEM50B,SCNN1D,CCDC24,CSNK2A2,LYSMD1,SEPHS1,CCDC12,FAM204A,DECR2,ZNF69,TDRP,PGGT1B,KIF12,OTUD5,ERCC5,MCRIP1,MARCHF6,RSPH1,EIF4ENIF1,ELP2,IQCC,TRIR,CASTOR3,ZNF30,KBTBD6,MRPL52,JMJD4,FAAP100,OARD1,IST1,MMAB,PYROXD2,ATM,FAM172A,THADA,IFT57,FLVCR1,FANCL,ILF3,DNALI1,GLI4,PDE9A,TTC17,DNAJC4,CDK13,MRPL55,DPY19L3,LENG8,NDUFB8,SH2B1,PHKA2,RANBP3,STK11,C1orf159,DDX56,PRR3,FAM98C,NICN1,UBE2G2,NEK11,IP6K2,PPOX,BBOF1,RTKN,POLR2C,RELCH,ARMCX4,RSBN1,MLLT6,PIBF1,ZNF70,AHI1,MRPL20,AGK,TMEM18,SH3YL1,EIF2B4,BIVM,C20orf96,PGAP1,HSCB,ADPRM,COG8,ARFGAP1,MIX23,CAPN10,AP1G2,METRN,FAM111A,ACYP2,APBB1,THOC1,ANKMY1,WDR59,ZNF25,C8orf58,SURF1,TMEM175,NUBP2,GNPTG,PHF12,GPN2,ACBD6,INTS11,TMEM220,DENND6A,ODR4,ZMYM5,IFT140,TAMM41,MMP15,PDP2,IFT74,GMDS,GTPBP6,MRPL24,GDPD3,DRC3,SNRNP48,SPACA9,DUS2,RC3H1,PCID2,ZNF44,CDK20,TMEM138,TRIM13,DENND11,FGFR1OP2,NPDC1,PKD1,MTURN,RIMKLB,LTO1,PIDD1,LRRFIP2,NME4,BCLAF3,TCTA,CWC15,CCDC106,NFYC,CCDC137,IFT80,BBS2,ZCCHC14,CEP83,HMGB1,NAA10,FBXO44,NELFE,DOHH,ANKDD1A,EXD3,METTL23,GLT8D1,NFKBID,C17orf75,P4HTM,CDH24,SBK1,PATZ1,ABHD18,PCED1A,ABTB1,STX8,NRBP2,TUSC2,MAPK15,MVB12A,EHMT2,ELP5,IKBKB,SYCE1L,TARS3,NBPF11,LMF1,DYNLT2,BRF1,ACIN1,ZC3H8,PPP1R3F,DGKE,RAB17,ENOSF1,MAU2,THOC6,RAB2B,UBOX5,ANKRD49,PAXBP1,LEMD2,ANKRD65,PQBP1,LENG1,MEX3A,FNTA,COA1,ZNF48,GALT,FNBP4,DENND6B,PEX11G,CCHCR1,PRMT7,LRRC56,INPP5E,KATNB1,PHF11,SLC35C2,IL11RA,TLE2,SGF29,NEK8,CETN3,CHD2,SF3A2,MBD3,USP40,IRX5,CRACR2B,CLEC2D,ZSWIM1,VPS28,FIZ1,TRPT1,DNAJC18,TATDN2,METTL14,LTB4R,KIFC2,PSPN,VPS4A,TSNARE1,NIT1,RNF220,ZNF720,SERP2,HEMK1,UPF3B,CD2BP2,RABEP2,TMEM218,IFT20,PTOV1,PCSK4,ALKBH4,GSAP,PYURF,RAB11FIP3,CLHC1,ARHGAP39,C18orf32,FRS3,NDUFAF5,GPBP1,C2orf68,FBXL8,MRE11,GNRH1,AP4M1,GK5,SLC41A3,RBM6,TRMT13,ZNF862,AKTIP,IDUA,CCDC82,SREK1IP1,ARID4A,POP5,SYF2,SMAD4,NTHL1,MYL5,GDI1,NLRP1,CUEDC2,CBX5,NSL1,GGT7,EPM2AIP1,UCKL1,GSTA4,SCAND1,SYNGAP1,PSME3IP1,TCF25,SRR,FANCC,GPSM1,WDR27,RBM8A,DHRS1,HSPBP1,EME2,PTCD1,B9D1,SSBP3,KHDC4,CROCC,PLXNB1,CERS5,RSAD1,EP400P1,USF2,NCAPH2,PPP1R26,HPS4,PNISR,RP9,SFPQ,ARHGEF25,AMT,STON2,ACAP3,TRIOBP,AMH,CARD8,SPAG7,TMEM187,NOSIP,MVD,ENKD1,FAM3A,ATP5IF1,ZDHHC1,ATAD2B,LRRC14,NISCH,ATAT1,IFFO1,MORN2,DUT,PLCG1,ZBTB8OS,CEP63,RALGAPA1,NUDC,TRMU,CTBP1,ANGEL2,BICRA,POMT1,MDM1,ATXN7L2,STMP1,TIGD5,CHTF18,FAM214A,HES1,CDPF1,UBTF,DPY19L2,UBE2J2,TJAP1,SMARCE1,NAT14,TAF1D,KATNBL1,MKS1,C1orf35,CCDC174,NDRG4,HES6,MTIF3,SPIN3,C7orf26,FOXRED1,MARCHF9,NME5,IFT88,TBRG1,SLX4IP,NPRL2,ZCWPW1,SUGT1,KLHDC4,KLHDC1,GATAD1,CCNL2,DCAKD,EFCAB7,BNIP2,FBXO46,DMPK,CLK3,RNPC3,C14orf28,ANKRD10,TENT4A,OBI1,INCA1,GFER,LRCH3,GABBR1,CHTOP,GALNT18,BTBD19,ZDHHC8,KANSL3,LSM5,RFNG,MED25,DDTL,SGSM3,TP53I13,WDR45,MC1R,COQ4,KYAT1,CHST14,COPS9,CCNT2,OSBPL7,DHRS12,ZMAT5,MAGI1,KAT2A,ARMC5,NFRKB,ZNF91,UBALD1,ACBD4,PMF1-BGLAP,SNU13,BRWD1,LRRC23,RBPMS,CSTF3,RBM26,PLA2G6,CSNK1E,TMEM86B,PURB,ZBTB3,SPATA6,TERF2,FBXW7,CEBPZOS,TBCK,RHPN1,ENDOV,BLCAP,MLH3,PPIE,CLDN15,SETD6,ITPA,KANSL1L,POLI,SEMA6C,PRPF39,ZNF34,ERMARD,KIAA0753,ANKRD46,EPS8L1,TRIM45,PRR36,SRRM2,GEMIN6,DOK4,WHRN,EPC1,MIB2,EGFL7,ZNF22,MZT2B,PHF1,HIRA,CETN2,MAP4K5,HDAC10,DEAF1,CHADL,CEP44,KLC4,CENPC,SCRN2,HSF4,ANKS3,ARGLU1,ATRAID,NOXA1,YJEFN3,UCK1,SMDT1,CCNL1,RGL3,PIGQ,ANKRD54,C10orf88,MARCKSL1,ANKRA2,SGSM2,RASSF7,RAD51C,PLEKHA3,KRI1,RNF25,MROH8,SCMH1,CCDC121,RBM45,MICALL2,HSPBAP1,CRYGS,YAE1,R3HDM2,CENPS,OGG1,PMS1,FAM160A2,NFIB,EGFL8,PSMG4,ZGPAT,DVL1,TIA1,MED4,HOOK2,PEX14,ZNF83,MOSMO,HCN3,RETREG3,TMUB2,ARFRP1,NSUN6,RFX3,CIAO2B,ZNF8,DNMT3A,ABCD4,TRIM46,BRAT1,PSMG3,MYL6B,TNK1,C19orf25,NEIL1,FAM234A,SZT2,SMARCD1,ADAMTS13,GRIPAP1,DTX3,KPTN,MTG2,RNF215,GIN1,NAT9,LIPT1,CPNE1,ELF2,NDUFA5,ABHD14A,CRAMP1,NUDCD2,LUC7L,ZNF43,WDR6,URGCP,TRMT61A,COA5,IRF2BP2,MICOS10,NOSTRIN,BTBD2,MAP2K7,PPAN,BBS4,COQ9,C14orf93,LRSAM1,DPH7,CBX8,POU6F1,TRA2A,NSMCE4A,SMARCD3,POLR3F,CEP131,DUS1L,NEURL4,PNPLA7,HINFP,XPA,PHOSPHO2,PCBD2,NR2C1,CRTC2,AMY2B,APBB3,CRELD1,NRIP2,CNTROB,CYTH2,BDH2,NOP53,IRF2BP1,RUFY2,RBM33,RWDD2A,TRIT1,FKBP2,ZDHHC21,MOK,IMMP1L,AGAP6,TPRA1,GABPB2,GEMIN8,TAF6L,ADAMTS10,CFDP1,TRIM66,RBM39,C15orf61,ODF2L,SLC26A6,TATDN3,SLC25A27,MRPS26,PGS1,IRF3,TMEM267,ATN1,SERGEF,FHIT,PYGO2,C7orf50,NRF1,COQ8B,ITFG2,C16orf86,RRNAD1,ZXDC,CCDC92,ADGRL1,IQCB1,KAT8,INTS3,SNF8,ZSWIM7,HRAS,PEX6,PIGL,HSBP1,NEK3,KCTD6,COQ8A,ZC3H7A,RP11-523H20.5,GBA2,CSAD,AGAP3,LRRC37A3,KIAA0895L,NDUFAF6,ATAD3B,SAMD10,OSCP1,GPATCH2,MUTYH,ZNF74,BCL7C,BANF1,DCAF8,OBSL1,C2CD5,STAG3L5P-PVRIG2P-PILRB,MFSD10,ABCA5,PHYKPL,TMEM259,SF3B1,POFUT2,TMEM9,NHLRC2,CACTIN,FRA10AC1,RUFY3,LIN37,MAP3K4,OGA,ZFP69,PYCR2,NUP42,IFT27,RECQL5,PAN3,PHKG2,NARF,PMF1,SARS2,NIPSNAP3B,ASB6,PPP1R16A,LRRC75B,SS18L2,TBC1D17,SENP3,DCAF16,GOLGA1,ARL3,NT5C3B,UBE2D4,MED31,EXTL2,RICTOR,OSGEPL1,PACS2,ZGLP1,CRLS1,TRIM3,SHC2,CFAP410,VAMP2,MTG1,USP24,CUEDC1,DTNB,IMMP2L,FAM76B,POGZ,GTPBP3,LMF2,CTSF,RBMX,RBM4B,TSC2,DTWD1,DNAJB2,EXOG,MRPS31,ANAPC2,BEND5,C21orf58,TAF1C,MAP3K12,NCOA5,MBD1,SURF6,SAMD1,AAAS,PIP4K2B,RNASEH2B,PRIMPOL,RPS8,CAPN15,CXXC1,EZH1,MRNIP,THAP6,SS18L1,ELMOD3,DDX17,C8orf82,E2F5,TTLL1,PARD6A,GSTM2,ING4,SLC7A6,SENP7,MTRF1,RAD52,REC8,CEP43,ARVCF,THYN1,NINL,CTDSPL2,GNPDA2,FBXL12,CEP290,SDR39U1,PGGHG,TELO2,IFT46,CDAN1,FBXL6,WSB1,GPALPP1,FAM216A,STK19,LRRC29,AUP1,C12orf76,POLL,TMEM240,FAM228B,WASHC1,USP21,TIGD1,KLC1,RBM10,GPS2,TRIM52,NDUFC1,NCBP3,PCBP4,THAP3,NOL12,MTFR1L,CRYZL1,PCP2,CLASRP,LYRM1,CCDC93,DFFB,TTC13,MBD6,CWC25,STK36,TTC32,MOB2,BAHCC1,MTX3,ZMAT1,SPATA2L,GOLGA8B,COMMD6,HP1BP3,SPATA33,ACP6,DNM1,STRADA,TAPT1,SMG9,CBR4,ZNF18,CBWD2,EIF2D,TMA7,GOLGA8A,ITGAE,CYP2R1,SETD4,SPIRE2,ALG9,TPRKB,SORBS3,KLHDC3,PSMC5,AARSD1,SPAG16,DUSP28,PUM2,RBM5,BOLA1,USP3,PXMP2,RPS19BP1,NKTR,CEP162,YPEL3,SAP30BP,CIAO3,VPS16,BCDIN3D,TTLL3,DOT1L,CRBN,NSMCE1,GNG7,ZNF84,SLC35B3,ATP5MC2,ADRA2C,BAZ2B,RXRB,CCP110,RHBDD3,TUBD1,C19orf18,GNL1,NMRK1,TRA2B,PRPF40B,REX1BD,PCMTD1,PIAS2,MRPS14,LRP5L,KATNIP,ASXL1,TSC1,SH3GLB2,RCBTB2,FASTK,CYHR1,SIRT6,FBXO42,MAN2C1,TAB3,DXO,HSPB11,USPL1,LZTR1,USP20,ANKRD13D,MRPL38,NELFA,PRPF4B,CCDC57,RABL2B,TRAPPC2,SIRT7,MRFAP1L1,TMEM178A | | Exist in public source | | NA |
| lncRNA targets the promoter region and positively regulates the gene expression. |
| Only predicted by TDF | | E2F5,DPH7,PGS1,PEX11G,DGCR8,ANKRD46,EFHC1,PDDC1,SART1,STX16,RNF219,CUEDC2,HEMK1,BRD7,DGCR14,PLEKHH2,RGL3,PRPF40B,SETD6,PIH1D1,ALKBH4,USF2,HIP1R,OSCP1,MED4,TUSC2,TCTE3,MAPK8IP3,MZF1,VAMP2,C3orf62,FAM160B2,ZSWIM1,C2CD5,MYL5,FBXO46,STRADA,CPNE1,MANBAL,TBKBP1,NT5M,GRIPAP1,NT5C,FAM234A,CDK13,FAM111A,SUGP1,RUFY2,PKIG,PTCD1,HCFC1R1,TRIT1,NPM2,C16orf91,ARGLU1,AP4B1,TAZ,DCAF8,GK5,C22orf39,NSL1,OTUD5,ZNF18,KIZ,DHPS,DMPK,EIF2D,CTC1,CEP63,VARS2,EP400NL,TMEM9,REC8,CHD9,NOSIP,KLHDC4,COA1,TATDN3,BDH2,GFER,NDUFB1,SRP14,RRP7BP,ZC3H11A,SDR39U1,RAD9A,NOL3,QTRT1,C17orf75,IFT74,ACCS,ENGASE,C2orf68,WDR5B,SAT2,WSB1,ANGEL2,C9orf3,THOC6,SCNM1,ATPIF1,THAP6,CYTH2,COMMD3,SBK1,WDR35,ING5,WDR13,AARSD1,PAN3,PCBD2,NFIA,MDM4,NPDC1,POU6F1,CCDC174,ZMAT1,LYSMD4,WDR60,RAD52,TJAP1,KBTBD6,EPC1,PARK7,TRMU,PGAP1,MRPS31,IFT140,C19orf44,NSMCE1,VPS37D,ZNF83,EVL,TLE2,ATRAID,ITPA,ZC3H6,THAP3,VPS28,LAMTOR4,SIN3B,AKTIP,CSNK2A2,BANF1,PTDSS2,HSCB,ABHD18,SURF1,PDP2,MAVS,ELAC1,RALGAPA1,GGA1,CCDC130,NELFCD,ABCD4,FAM195B,MFSD8,TRIOBP,CCNL1,FGFR1OP2,RBMS2,CPSF7,ARIH2OS,TMEM50B,C20orf96,CDAN1,ANKRD39,SGSM3,CC2D2A,GTF2H4,OSGEPL1,PLXNA3,FAM204A,BNIP2,ZNF70,ACP6,OXLD1,LPAR2,SORBS3,METTL17,ELOF1,C1orf56,EBPL,NCBP3,KPNA5,C9orf114,ING4,C7orf50,CWC25,TPRA1,MPLKIP,ENOSF1,DNAJC4,FRA10AC1,PAN2,C14orf79,TMCO6,DNAJC18,RNASEH2B,TMEM120B,KIAA0907,PRR14,MAU2,SETD4,CCDC137,MOAP1,KPTN,ZNF48,HSF4,NUPL2,HIRA,TRMT112,ERMARD,MED28,CIRBP,UBTF | | Exist in public source | | NA |
| lncRNA targets the promoter region and negatively regulates the gene expression. |
| lncRNA targets the 3'UTR region and negatively regulates the mRNA. |
| Only predicted by lncTar | | KPNB1,PSMD2,PNPO,SLC36A1,MYH9,BECN1,ACTR3,GNL3L,EIF4G1,TUBA1C,DPP3,GPN1,GDI2,CANT1,CDV3,DNAJC14,PSMC1,CAP1,CLTC,GLB1,FLII,ATP2A2,DHX8,HSPA8,M6PR,ABCB7,NMD3,SSR3,SURF4,SEC24D,NOCT,IQGAP1,PCCB,DYNC1I2,RAN,CLPB,SLC25A24,SEC23A,SRP54,MAPK1,ALAS1,TARS1,COPB2,RAB5C,GNS,LPCAT3,MYOF,COPG1,BFAR,ATG7,GNPTAB,PKM,ATP5F1B,MAN2B1,CTSB,SPRING1,GLMP,IGF2R,ACTR2,VAMP7,EEF2,COLGALT1,SEC23B,OGDH,PSMD8,CSNK1A1,TMOD3,CAB39,PLIN3,CALU,YME1L1,CYFIP1,LSM12,HCCS,MAGT1,ARPC2,ARCN1,TRAF7,NOMO2,RAP1GDS1 | | Exist in public source | | NA |
| lncRNA targets the skipped exon region. | | -lncRNA and exonskipping events are positively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | ORF mutation |
| -lncRNA and exonskipping events are negatively correlated. |
 |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | LOF | | ENSG00000276259 | ENST00000622896 | exon_skip_52671 | chr10:97461495-97461622 | -13.32 | -0.1066 | MMS19 | ENST00000370782,ENST00000438925 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_111863 | chr14:23565815-23565892 | -13.94 | -0.2446 | AP1G2 | ENST00000308724,ENST00000397120 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_114365 | chr14:74290026-74290118 | -11.86 | -0.1303 | ABCD4 | ENST00000356924 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_114376 | chr14:74293153-74293248 | -13.70 | -0.1557 | ABCD4 | ENST00000356924 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_370518 | chr22:50247691-50247776 | -16.07 | -0.2034 | HDAC10 | ENST00000216271 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_377198 | chr3:123130479-123130616 | -14.78 | -0.3889 | PDIA5 | ENST00000316218 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_382458 | chr3:38131595-38131638 | -7.62 | -0.1859 | ACAA1 | ENST00000333167 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_8541 | chr1:109657589-109657671 | -10.80 | -0.2348 | GSTM4 | ENST00000369836 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_16568 | chr1:201989382-201989531 | -13.84 | -0.1538 | RNPEP | ENST00000295640 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_41813 | chr10:68337857-68337996 | -13.31 | -0.1001 | HNRNPH3 | ENST00000265866 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_52701 | chr10:97468965-97469104 | -17.09 | -0.1675 | MMS19 | ENST00000370782,ENST00000438925 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_53559 | chr10:101793912-101793998 | -11.61 | -0.1416 | OGA | ENST00000361464 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_66482 | chr11:126274926-126275021 | -11.37 | -0.1278 | FOXRED1 | ENST00000263578 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_111746 | chr14:23347890-23347996 | -14.22 | -0.1598 | SLC22A17 | ENST00000397267 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_111870 | chr14:23566561-23566686 | -15.58 | -0.1513 | AP1G2 | ENST00000397120 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_123601 | chr15:74897010-74897219 | -22.52 | -0.1272 | MPI | ENST00000352410 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_133217 | chr16:8635038-8635079 | -9.53 | -0.4765 | METTL22 | ENST00000381920 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_287763 | chr17:28884224-28884315 | -11.85 | -0.1975 | FLOT2 | ENST00000394908 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_313557 | chr19:5786748-5786845 | -17.68 | -0.2357 | DUS3L | ENST00000309061 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_319223 | chr19:43526200-43526349 | -18.33 | -0.1637 | ETHE1 | ENST00000292147 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_324294 | chr2:27774423-27774530 | -10.95 | -0.1230 | MRPL33 | ENST00000296102 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_326885 | chr2:74490024-74490127 | -14.05 | -0.1527 | TTC31 | ENST00000233623 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_358821 | chr20:63943652-63943669 | -5.82 | -1.9400 | UCKL1 | ENST00000354216 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_371367 | chr3:9697710-9697866 | -17.71 | -0.1554 | MTMR14 | ENST00000296003 | In-frame | | ENSG00000276259 | ENST00000622896 | exon_skip_374375 | chr3:49675182-49675309 | -17.34 | -0.1562 | APEH | ENST00000296456 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_436035 | chr5:79656957-79657001 | -6.63 | -0.1842 | TENT2 | ENST00000296783,ENST00000428308,ENST00000453514 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_442657 | chr5:74730259-74730398 | -11.73 | -0.1364 | GFM2 | ENST00000296805,ENST00000509430 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_470226 | chr7:103307595-103307708 | -10.86 | -0.1220 | PMPCB | ENST00000249269 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_481699 | chr8:19824802-19824972 | -15.46 | -0.1031 | INTS10 | ENST00000397977 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_494079 | chr8:144099080-144099205 | -22.55 | -0.2278 | SHARPIN | ENST00000398712 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_509943 | chrX:47175018-47175092 | -15.30 | -0.2250 | RBM10 | ENST00000377604 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_79575 | chr12:6727925-6728001 | -8.89 | -0.1646 | COPS7A | ENST00000229251,ENST00000534877,ENST00000534947,ENST00000539735,ENST00000543155 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_501752 | chr9:136992924-136992974 | -8.79 | -0.2664 | PAXX | ENST00000371620 | Frame-shift | | ENSG00000276259 | ENST00000622896 | exon_skip_131398 | chr15:101286213-101286293 | -12.52 | -0.1647 | SNRPA1 | ENST00000254193 | Frame-shift |
| lncRNA targets by miRNA. |
 |
| LncRNA Ensembl ID | miRNA ID | LncRNA ENST ID | Binding site in lncRNA | Score | Energy | Align Len | Public source | | ENSG00000276259 | hsa-mir-185 | ENST00000622896 | chr16:58522999-58523082 | 167.00 | -95.68 | 81 | NA | | ENSG00000276259 | hsa-mir-185 | ENST00000622896 | chr16:58523286-58523371 | 153.00 | -73.13 | 81 | NA | | ENSG00000276259 | hsa-mir-185 | ENST00000622896 | chr16:58523165-58523247 | 152.00 | -96.54 | 78 | NA | | ENSG00000276259 | hsa-mir-22 | ENST00000622896 | chr16:58523548-58523623 | 183.00 | -65.19 | 81 | NA | | ENSG00000276259 | hsa-mir-22 | ENST00000622896 | chr16:58522972-58523054 | 169.00 | -85.30 | 87 | NA | | ENSG00000276259 | hsa-mir-22 | ENST00000622896 | chr16:58523366-58523458 | 169.00 | -71.01 | 81 | NA | | ENSG00000276259 | hsa-mir-22 | ENST00000622896 | chr16:58523060-58523151 | 165.00 | -78.05 | 91 | NA | | ENSG00000276259 | hsa-mir-22 | ENST00000622896 | chr16:58523165-58523249 | 152.00 | -88.49 | 80 | NA | | ENSG00000276259 | hsa-mir-22 | ENST00000622896 | chr16:58523760-58523843 | 149.00 | -65.62 | 78 | NA | | ENSG00000276259 | hsa-mir-22 | ENST00000622896 | chr16:58523452-58523538 | 145.00 | -68.98 | 84 | NA | | ENSG00000276259 | hsa-mir-21 | ENST00000622896 | chr16:58523454-58523526 | 165.00 | -57.51 | 74 | NA | | ENSG00000276259 | hsa-mir-21 | ENST00000622896 | chr16:58523001-58523078 | 161.00 | -76.04 | 75 | NA | | ENSG00000276259 | hsa-mir-21 | ENST00000622896 | chr16:58523383-58523461 | 153.00 | -67.85 | 76 | NA |
| RNA A-to-I editing events in lncRNA. |
| LncRNAediting ID | LncRNA Ensembl ID | Chromosome | Editing Position | Strand | Gene Type | Gene Name | Transcript ID | Transcript Type | Transcript Name |
| Edited-associated DElncRNAs in cancer. |
| LncRNA Ensembl ID | LncRNA Index | Cancer Type | Chr_Postion_Strand | AVE1 | AVE2 | log2FC | W-value | P-value | Adjc.p-value | Change |
| Correlation between RNA A-to-I editing events's frequecy and lncRNA expression. |
| LncRNA Ensembl ID | LncRNA Index | Correlation | P-value | Adjc.p-value |
| Cis-expression quantitative trait loci(cis-eQTL) of lncRNA. |
| LncRNA Ensembl ID | LncRNA Name | SNP info | Number of Positive corelated Cancer | Positive corelated Cancer | Number of Negative corelated Cancer | Negative corelated Cancer |
| lncRNA regulates differentially expressed genes by function as enhancer. |
| LncRNA Ensembl ID | PC Gene ID | PC Gene Name | Positive correlated cancers | Cancer with PC gene up-regulation | Cancer with PC gene down-regulation |
| LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region. |
| LncRNA Ensembl ID | LncRNA ENST ID | PC Gene Name | PC Gene ID | PC ENST ID | dG | nDG | Cancer with PC gene up-regulation | Cancer with PC gene Down-regulation |
| lncRNA regulates mRNA by competing the miRNA binding site with mRNA. |
| LncRNA Ensembl ID | lncRNA-miRNA-mRNA | Cancer Types | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PTCD1 | CHOL,LGG,MESO,PAAD,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,WDR33 | SKCM,KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,MSANTD2 | SKCM,KICH,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ZNF3 | SKCM,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,NDE1 | KICH,CHOL,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,E2F5 | SKCM,KICH,TGCT,CHOL,LGG,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ZNF22 | SKCM,KICH,TGCT,CHOL,LGG,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,MED30 | SKCM,KICH,TGCT,CHOL,LGG | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ZNF48 | CHOL,LGG,MESO,PAAD,SARC | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ZHX2 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RXRB | SKCM,KICH,TGCT,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CRMP1 | KICH,CHOL,LGG,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,C1orf35 | KICH,CHOL,LGG,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PHF2 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,DDX42 | SKCM,KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,WDR35 | SKCM,KICH,CHOL,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,KAT7 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ATAT1 | SKCM,KICH,TGCT,CHOL,LGG,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,COIL | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,TRMT10B | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RBM6 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,DHX30 | CHOL,LGG,MESO,PAAD,SARC | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,USP21 | KICH,TGCT,CHOL,LGG,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,YTHDC1 | SKCM,KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,LCMT2 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CBX1 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,TRIM45 | KICH,TGCT,CHOL,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,FUZ | KICH,CHOL,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PRR14 | KICH,CHOL,LGG,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SFPQ | SKCM,KICH,CHOL,LGG,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,C2orf68 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,BANP | KICH,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RBM8A | KICH,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,NRF1 | SKCM,KICH,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PM20D2 | SKCM,KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RPRD2 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,INO80D | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PCGF2 | KICH,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PIAS4 | CHOL,LGG,MESO,PAAD,SARC | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RING1 | KICH,TGCT,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,KANSL1 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ZNF7 | SKCM,KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,BRD2 | SKCM,KICH,CHOL,LGG,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ILKAP | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,NAA16 | SKCM,KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RETREG3 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,KIAA0895L | CHOL,LGG,MESO,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,FAM117B | SKCM,KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,TADA1 | SKCM,KICH,CHOL,MESO,SARC | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SENP7 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PAM16 | CHOL,LGG,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,BOLA1 | KICH,CHOL,LGG,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PRCC | KICH,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,KLHL23 | SKCM,TGCT,CHOL,LGG,MESO,SARC | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ACYP1 | KICH,TGCT,CHOL,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PARP2 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,TCERG1 | SKCM,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,NCOA5 | SKCM,KICH,CHOL,LGG,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RBM10 | TGCT,CHOL,LGG,MESO,PAAD,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ZSWIM4 | KICH,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,KAT2A | KICH,CHOL,LGG,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,NCAPH2 | CHOL,LGG,MESO,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SRSF3 | SKCM,KICH,CHOL,LGG,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,EHMT2 | KICH,TGCT,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,TSEN2 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ERCC3 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PHC1 | KICH,CHOL,LGG,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,EXD3 | KICH,CHOL,LGG,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CHD2 | SKCM,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,TSPOAP1 | KICH,TGCT,CHOL,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SRSF6 | SKCM,KICH,CHOL,LGG,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RBM4B | KICH,TGCT,CHOL,LGG,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PPOX | KICH,CHOL,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,COA5 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,H1-0 | KICH,TGCT,CHOL,LGG,MESO,SARC | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,EXOSC2 | SKCM,KICH,CHOL,LGG,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RAD52 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PRR36 | TGCT,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PDE9A | KICH,TGCT,CHOL,LGG,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,KRBOX4 | KICH,TGCT,CHOL,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,DNMT3A | SKCM,KICH,CHOL,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ASXL1 | CHOL,LGG,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SFI1 | CHOL,MESO,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CRAMP1 | SKCM,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PCF11 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,DUSP12 | KICH,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,NEIL1 | KICH,CHOL,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,HEXIM2 | KICH,CHOL,LGG,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,VEZF1 | KICH,TGCT,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,EIF2D | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SALL2 | KICH,TGCT,CHOL,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,NAB1 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PAXBP1 | SKCM,KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,DCAKD | KICH,TGCT,CHOL,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RBM39 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ZC3H8 | SKCM,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,TNRC18 | CHOL,LGG,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,LUC7L3 | SKCM,KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,DEK | SKCM,KICH,TGCT,CHOL,SARC | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PAGR1 | KICH,CHOL,LGG,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ING5 | SKCM,KICH,CHOL,LGG,MESO,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CEP131 | CHOL,LGG,MESO,PAAD,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CLK2 | SKCM,KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,DHX9 | SKCM,KICH,CHOL,LGG,SARC | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,IRF2BP2 | SKCM,KICH,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SSRP1 | KICH,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SNRNP48 | SKCM,KICH,CHOL,LGG,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PCID2 | SKCM,KICH,CHOL,LGG,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,TMEM183A | SKCM,KICH,CHOL,MESO,SARC | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PRPF38A | SKCM,KICH,CHOL,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,LUC7L2 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,BTBD2 | TGCT,CHOL,LGG,PAAD,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,VANGL2 | KICH,TGCT,CHOL,LGG,MESO | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SYNGAP1 | SKCM,KICH,CHOL,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SENP6 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,E4F1 | CHOL,LGG,MESO,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,GOLGA8B | CHOL,LGG,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,KHDC4 | SKCM,KICH,CHOL,LGG,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PHF10 | KICH,TGCT,CHOL,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CEP95 | SKCM,KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,HEXD | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ANP32A | SKCM,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,MRPL53 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,MBTD1 | SKCM,KICH,CHOL,LGG,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,EIF4ENIF1 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,TIA1 | SKCM,KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,TLE2 | TGCT,CHOL,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,DPF2 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RSBN1L | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PLA2G6 | CHOL,LGG,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,MSL1 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RC3H1 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,MTMR11 | KICH,CHOL,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,GABBR1 | KICH,TGCT,CHOL,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,TAF6L | KICH,LGG,MESO,PAAD,SARC | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RBBP6 | SKCM,KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,EDRF1 | KICH,CHOL,LGG,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CTPS2 | KICH,TGCT,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SBK1 | KICH,TGCT,CHOL,LGG,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,TAF7 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,TSEN54 | KICH,CHOL,LGG,MESO,PAAD,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,EPC2 | SKCM,KICH,CHOL,LGG,SARC | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,TRIM13 | SKCM,KICH,CHOL,LGG,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CRTC2 | KICH,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,POLG2 | SKCM,KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,HOOK2 | TGCT,CHOL,LGG,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,MLLT6 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,NONO | SKCM,KICH,TGCT,CHOL,LGG,MESO | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,NXF1 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,NVL | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,MYEF2 | KICH,TGCT,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,FAM228B | KICH,CHOL,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,OBSL1 | KICH,TGCT,LGG,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SMARCC1 | SKCM,KICH,CHOL,LGG,MESO,SARC | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,MRPL38 | KICH,CHOL,LGG,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RBMX | SKCM,KICH,TGCT,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,UBQLN4 | KICH,CHOL,LGG,MESO,SARC | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PMS1 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,UBE2G2 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CELSR2 | KICH,CHOL,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ARGLU1 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,FBXO46 | SKCM,KICH,CHOL,LGG,MESO,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PHF12 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,MSL2 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RBM45 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,MDC1 | KICH,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RBM5 | SKCM,KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CCDC57 | KICH,CHOL,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SNRPA | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CXXC1 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,COPS7B | KICH,CHOL,LGG,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RCOR3 | SKCM,KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SOGA1 | KICH,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,NPRL2 | KICH,TGCT,LGG,PAAD,SARC | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ANGEL2 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SUGP1 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RGL2 | KICH,TGCT,CHOL,LGG,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,REV1 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,USF1 | KICH,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,C14orf93 | KICH,CHOL,LGG,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SYMPK | CHOL,LGG,MESO,PAAD,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CDK5RAP3 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ADCK5 | CHOL,LGG,MESO,PAAD,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CHTOP | SKCM,KICH,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RBM14 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,MDM4 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,HINFP | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,UIMC1 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,MKS1 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PCIF1 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PURB | KICH,CHOL,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SF3B1 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,FNBP4 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CEP44 | SKCM,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,TFAP4 | SKCM,TGCT,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SRSF1 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,DGCR8 | KICH,CHOL,LGG,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,DET1 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ENDOV | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,POGZ | SKCM,KICH,CHOL,LGG,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,BRD8 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,TBP | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,KANSL1L | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,THOC2 | SKCM,KICH,CHOL,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,WDR83 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,FANCG | KICH,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RYK | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CRYZL1 | KICH,TGCT,CHOL,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,AARSD1 | CHOL,LGG,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CTDSPL2 | SKCM,KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,BUD13 | KICH,CHOL,LGG,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SSBP4 | KICH,CHOL,MESO,PAAD,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PRR3 | SKCM,KICH,TGCT,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ELF2 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SCAF4 | KICH,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,KDM5B | SKCM,KICH,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,LYSMD1 | KICH,CHOL,LGG,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,HMGB2 | KICH,CHOL,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ING4 | SKCM,KICH,TGCT,CHOL,LGG,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CENPJ | SKCM,CHOL,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SSBP2 | SKCM,KICH,TGCT,CHOL,SARC | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RGL3 | TGCT,CHOL,MESO,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SOX4 | SKCM,KICH,CHOL,LGG,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RRNAD1 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,BRD3 | SKCM,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,TDRP | KICH,TGCT,CHOL,LGG,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SRRT | KICH,CHOL,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PMF1 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,YY1AP1 | KICH,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,DCAF8 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,NSMCE4A | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PLXNB1 | KICH,TGCT,CHOL,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CASC3 | KICH,CHOL,LGG,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CDKN1B | KICH,TGCT,CHOL,LGG,SARC | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ZMYM3 | KICH,TGCT,CHOL,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,TTC13 | KICH,CHOL,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,N4BP2L2 | SKCM,KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,H3-3A | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,LRRC14 | CHOL,LGG,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,RSL24D1 | SKCM,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,METAP1D | SKCM,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,MEX3A | SKCM,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,MTA1 | SKCM,TGCT,CHOL,LGG,PAAD,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,PRPF39 | SKCM,KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,GPALPP1 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,WBP1 | KICH,TGCT,CHOL,LGG,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SREK1 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ANP32E | KICH,CHOL,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,NFRKB | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ZBTB5 | SKCM,KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CREBBP | SKCM,CHOL,LGG,MESO,SARC | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,WDR90 | KICH,CHOL,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,ILF3 | SKCM,CHOL,LGG,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SMAD4 | SKCM,KICH,TGCT,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,DEDD | KICH,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,HDGFL2 | TGCT,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,INO80E | CHOL,LGG,PAAD,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,EDC3 | CHOL,LGG,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,HSD11B1L | KICH,TGCT,CHOL,MESO,PAAD | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,FBXL12 | KICH,CHOL,LGG,MESO,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,SPIN4 | SKCM,TGCT,CHOL,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,CCHCR1 | KICH,CHOL,MESO,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-22,KATNBL1 | KICH,CHOL,LGG,SARC,KIRP | | ENSG00000276259 | RP11-481J2.4,hsa-mir-21,TCAF1 | TGCT,THCA,MESO,PAAD,SARC | | ENSG00000276259 | RP11-481J2.4,hsa-mir-21,DMAC2L | TGCT,THCA,MESO,PAAD,SARC | | ENSG00000276259 | RP11-481J2.4,hsa-mir-21,MOAP1 | TGCT,THCA,MESO,PAAD,SARC |
| ORFfinder result for the gencode.v22.lncRNA.transcript.fa. |
| lncRNA Ensembl ID | lncRNA ENST ID | length(AA) | start at transcript | end at transcript | | ENSG00000276259.1 | ENST00000622896.1 | 100 | 616 | 918 |
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