 lncRNA targets the enhancer region and positively regulates the gene expression. |
| lncRNA targets the promoter region and positively regulates the gene expression. |
| lncRNA targets the promoter region and negatively regulates the gene expression. |
| lncRNA targets the 3'UTR region and negatively regulates the mRNA. |
| Only predicted by lncTar | | SPICE1,ERGIC2,DIP2B,NEK4,METTL14,FNIP1,MNT,AP5M1,ARID1A,MARCHF6,SENP7,RNF123,PTPRK,RBBP6,ATM,MAP4K3,BECN1,SBNO2,TAF4,SCFD1,SMARCC2,SMCR8,TNPO3,KLHL18,QSER1,PPP1R12A,BRD4,GNL3L,SNW1,TPM3,TRIP11,ACVR1B,KIAA1109,STAU2,TMEM161B,STRN3,RASAL2,TBC1D15,KAT6B,EDEM1,ITPR2,EIF4G1,RAB7A,TUBA1C,PTK2,FCHO2,CREBBP,CLDND1,LGALS8,PPP1R9B,PBRM1,ANKRD28,HEATR6,PSMC1,VPS13B,SRP72,SACM1L,OSGIN2,TIPRL,GMPS,TDG,UBXN2B,PRRC2C,ATP11B,DNM1L,PDPK1,PHF3,WWP1,CEP120,NOL8,CASP8,PAK2,CPEB4,ARID1B,MAFG,PPHLN1,STRN,SLFN5,EPS8,GOLIM4,TMEM33,PTPRE,TTC3,PHF20,KIDINS220,CYLD,CDC27,TMEM87A,TMCO3,RNF31,BTBD10,APPBP2,GANAB,MINK1,MKLN1,WDR55,ITSN2,SLTM,MTMR12,PSD3,PSME3,RAB35,IGSF3,RB1CC1,KLF13,TIMM23B,SMAD1,KIF21A,ERGIC1,WIPF2,AGFG1,SEMA4C,LPCAT3,GPD2,FBXW8,XIAP,RUNX1,MED12,TP53BP2,VPS35,POM121,BRPF3,DARS1,BRMS1L,POC1B,CRLF3,PBX2,SAMD8,PROSER3,UVRAG,MARCHF7,OSBPL8,RNF145,CNOT2,ERCC6L2,KAT7,GALNT7,MTRR,TMEM123,AZI2,ACTR2,ANKRD52,DCAF7,VAMP7,GPATCH8,ABL2,NUP188,FASTKD2,ICAM1,KBTBD2,MED1,NUP58,CNOT6L,PPFIBP1,HBP1,EIF4G2,STX7,IPO9,CD46,GID4,CDK13,CLASP1,NIN,CUL2,NAA50,GON4L,SSH2,CAB39,HUWE1,OXR1,PRKAR1A,PPP1CC,TEP1,MIS18BP1,SLC6A6,MBOAT1,FARP1,KMT2E,LPP,NSRP1,DCAF5,RASSF3,EDRF1,OLA1,TLK1,CPD,RABEP1,FAM13B,INTS8,MED23,SH3PXD2B,NOTCH2,DPP8,SUCO,FNDC3B,ATF1,NDE1,ARHGAP32,ANKLE2,FYCO1,SPOPL,POLG,NOMO2,RAP1GDS1,MYD88,PARP1,TMEM87B,UACA,FAM168B,PHF6,PAFAH1B2,SMYD4,FAM53C,USP4,SINHCAF,APPL2,SLC36A1,VPS4B,ADCY7,SUSD6,NEPRO,PMM2,POGLUT3,PIBF1,REV1,FRS2,PNN,KHNYN,MLXIP,FAM104A,RELL1,MBNL1,UBXN7,EDC4,LARP1,NPEPPS,ACTN1,RNF214,BZW1,HECTD1,DCTN4,DUSP7,TUT4,SLAIN2,PPP6R1,PKN2,GTF2H1,NDEL1,PARP8,PUM1,CHORDC1,KANSL1L,FNDC3A,SEC24B,FOXN2,RABL3,LAMC1,SFT2D2,FAM91A1,KMT2D,BAZ1B,PRIM2,CTNNB1,ECT2,PKD2,ANAPC1,MON2,USP33,ANKRD27,MAPK14,MAU2,TP53BP1,VPS37A,TUBGCP4,PRRC2A,RYK,HSPA4,PPIP5K2,IFNAR2,MOB1B,ZDHHC5,USP32,SNX30,RNF34,G3BP1,TTLL5,GIGYF2,LLGL1,DHX38,TFCP2,WBP11,PIP4K2A,TMPO,PIAS1,DNMT1,RIOK2,PRMT5,TCEA1,GALNT2,TWF1,BRD2,PAN3,LUZP1,DDX3X,IPO5,MAP3K20,ASXL2,LSM14A,PHF8,USP47,POLR2B,ESF1,FRYL,CYRIB,CEP350,PIKFYVE,R3HDM1,RPL7L1,ACVR1,MYOF,HSPG2,TPM4,CRK,MAP3K3,ATP2B4,RAB18,SLC10A7,DENND4A,GNPTAB,C16orf70,VPS50,MED13,RAP1B,STAT6,TMEM131,ARF3,EP400,RSBN1L,USP46,ITGA5,XRN1,NFKB1,SMG6,CEMIP2,EPG5,SPRING1,KIAA0232,WDR20,NUP98,CCNT2,KIAA0586,RIT1,ATP11A,CNOT9,ARHGEF18,CIAO1,TRIP12,SRPK2,AKAP10,PSMD5,DIAPH1,TM9SF4,GTF2A1,NPC1,CHD2,TFIP11,CHD9,PRKAA1,MPHOSPH8,RNF41,MYO18A,SOS1,SMAD5,MORC3,CSNK1A1,NDFIP2,ZEB1,TUBGCP3,GOSR1,SIN3B,ABI2,SETD7,YAF2,BRAP,CTNNA1,MOSPD2,VRK2,TAF2,GCC2,CHD6,CAST,SLC25A30,TEX2,DOCK10,CDK2,TRIM33,CPSF6,PIP5K1A,MED21,HEATR5A,FEM1B,TNFRSF10A,THOC2,CANX,CELF1,MPRIP,DOCK1,NEMF,CTDSP2,NCOR1,KRR1,CIP2A,EMC1,TAF5L,SCAF11,FNBP1L,CNOT1,MMS19,NF1,CAMSAP2,PCF11,SLC35E1,ITSN1,UBAP1,MYH9,CHST11,CASP10,SLC11A2,FCF1,USP15,NCBP3,SERINC5,EIF4G3,SH3PXD2A,YPEL2,PPP1R21,WWTR1,SECISBP2L,UBR1,SEPTIN10,ACTR3,NOP9,CHD8,TAOK3,RASA2,TSR1,MED14,ILF3,KMT5B,KIAA0100,XPC,PRDM2,ARHGAP21,IARS1,UBE4A,VPS26A,KIRREL1,DCUN1D1,STK26,CDV3,PHACTR2,INTS3,ATL2,CAP1,ANKRD11,PMS1,ZC3H11A,ATF7,KATNAL1,LASP1,FKTN,WASF2,VGLL4,MACF1,DHX8,NBR1,SH3GLB1,RIC1,NUMB,SPRED2,KTN1,ATP2C1,C5orf24,TTLL4,FLT1,USP28,SET,PTPN4,HEG1,FARP2,SNRK,TTC17,DYNC1I2,DOCK7,NEK9,SEPTIN11,ELK1,CLIP1,NSUN3,SART3,CORO1C,API5,USP48,RBM39,RAI1,NCOA2,RC3H2,SNAP23,PRKDC,RSRC2,BCL2L2,RNF169,UBR5,CNIH1,TBC1D2B,RAI14,RAB11FIP1,ERN1,SEL1L3,LARP4,USP9X,MAST4,ROCK2,CCDC88A,ZBED6,NUP54,TNKS1BP1,RHBDD1,NUP62,UEVLD,KDM5C,YWHAZ,MTMR1,NOTCH3,HSPA14,TGFBRAP1,WNK1,TYW1,NONO,SSH1,MAN2B1,PPP3R1,PPP4R2,FKBP15,SOCS7,KLHL5,WDR26,SP1,EPS15,SMCHD1,MAP4K4,OSBPL9,TIRAP,IRF2,KMT2A,GOLGA2,NID2,MGAT4A,PPIG,KIF2A,PLS1,RAB3D,EIF3L,EMSY,SOS2,SLC30A5,THRAP3,C6orf62,CS,PCYT1A,JOSD1,EIF3E,POLK,CPNE8,CEP290,CCDC91,ACTN4,DCAF17,IL6ST,DYRK1A,COQ10B,AFF1,CARM1,ABCE1,MRTFB,USPL1,USP8,PICALM,TECPR2,ITFG1,UTP23,B3GNT5,USP14,MAGT1,RAD54L2,ECD,CPSF2,SETD2,SPG11,SMC6,GANC,INPP4A,ATP2B1,GLYR1,DHX36,TRIM13,IBTK,FER,BAZ1A,TANK,SRGAP2,NRDC,MARK2,RAB6A,GSK3B,GTF3C2,AEBP2,CEP170,OXSR1,RNF4,NT5C2,SENP2,RALGAPB,CCNG2,HIPK1,ARHGAP26,RNF40,LIMS1,QTRT2,TACC1,ELOVL5,EPB41,NOP14,NRBF2,PSEN1,CEP104,INTS6,HBS1L,CASP4,PTPN11,MCM3AP,PLEKHB2,AGO4,GPSM2,SLC39A6,POLR2A,CNTRL,ANKFY1,BNIP2,DNAJC11,NR2C2,DIP2A,METTL15,CLTC,ATRN,AP1AR,SLC25A36,OTUD6B,PARG,ATP2A2,DIAPH2,SON,UHRF2,PIK3C3,CCDC47,BIRC2,PTPRG,M6PR,PTPN12,APAF1,BBX,CDYL,TAF1,PCNX1,FAM98B,DMXL2,DDI2,CDC42SE2,VIRMA,IQGAP1,PLEKHA5,SLMAP,SESTD1,SNTB2,KLF7,GSTCD,STRAP,RFX5,STK24,EML1,ARHGAP5,CLCC1,SKIL,CSNK2A1,PTDSS1,CARD8,FTO,UBN1,COPB2,SEC14L1,SETD5,SF3B1,NIPA2,C2CD5,PWWP2A,SCARB2,ZFYVE1,PCM1,PDLIM5,SEPTIN8,DYNC1LI2,TNKS,KBTBD4,MIDEAS,C2CD3,ZNF106,RASA1,STT3A,CERT1,PTPN9,INCENP,MED13L,PHC3,WIPF1,ANKRD12,OPA1,ADAM9,COG6,SIK3,ABHD5,RSRC1,SERINC3,TMEM39A,DOCK9,NCOA3,SYNJ1,TBC1D23,OGFOD1,ABCA1,ERC1,TNPO1,RHOT1,ADCY3,PPP4R1,PGM3,NEK7,FAM160B1,RO60,CSNK1G3,HEATR5B,SEC31A,DCP2,CYFIP1,TRAF3,MCTP2,ZNF28,LSM12,TMEM184C,ATRX,PPFIA1,DENND5A,BCOR,BDP1,KANSL3,RALB,SYNRG,EVC,SCAF4,SLC30A7,USP10,ARPC2,WWC2,MIA3,DLG1,AFAP1,EPC1,MCFD2,MPHOSPH10,NDUFS1,NSD1,SUPT20H,MPHOSPH9 | | Exist in public source | | BLOC1S6 |
| lncRNA targets the skipped exon region. | | -lncRNA and exonskipping events are positively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | ORF mutation | | ENSG00000275494 | ENST00000613406 | exon_skip_335378 | chr2:237751199-237751271 | -11.17 | -0.5077 | LRRFIP1 | ENST00000392000 | In-frame |
| -lncRNA and exonskipping events are negatively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | LOF | | ENSG00000275494 | ENST00000613406 | exon_skip_324294 | chr2:27774423-27774530 | -12.10 | -0.1315 | MRPL33 | ENST00000296102 | Frame-shift | | ENSG00000275494 | ENST00000613406 | exon_skip_481821 | chr8:22067084-22067159 | -12.88 | -0.2221 | DMTN | ENST00000265800,ENST00000358242,ENST00000432128,ENST00000523266 | In-frame | | ENSG00000275494 | ENST00000613406 | exon_skip_358606 | chr20:63202286-63203807 | -61.77 | -0.1228 | YTHDF1 | ENST00000370339 | In-frame | | ENSG00000275494 | ENST00000613406 | exon_skip_430434 | chr4:82356536-82356683 | -9.83 | -0.1229 | HNRNPD | ENST00000313899 | In-frame | | ENSG00000275494 | ENST00000613406 | exon_skip_494079 | chr8:144099080-144099205 | -25.96 | -0.2404 | SHARPIN | ENST00000398712 | Frame-shift | | ENSG00000275494 | ENST00000613406 | exon_skip_360302 | chr21:42896926-42897047 | -13.43 | -0.1618 | NDUFV3 | ENST00000340344 | Frame-shift |
| lncRNA targets by miRNA. |
| LncRNA Ensembl ID | miRNA ID | LncRNA ENST ID | Binding site in lncRNA | Score | Energy | Align Len | Public source |
| RNA A-to-I editing events in lncRNA. |
| LncRNAediting ID | LncRNA Ensembl ID | Chromosome | Editing Position | Strand | Gene Type | Gene Name | Transcript ID | Transcript Type | Transcript Name |
| Edited-associated DElncRNAs in cancer. |
| LncRNA Ensembl ID | LncRNA Index | Cancer Type | Chr_Postion_Strand | AVE1 | AVE2 | log2FC | W-value | P-value | Adjc.p-value | Change |
| Correlation between RNA A-to-I editing events's frequecy and lncRNA expression. |
| LncRNA Ensembl ID | LncRNA Index | Correlation | P-value | Adjc.p-value |
| Cis-expression quantitative trait loci(cis-eQTL) of lncRNA. |
| LncRNA Ensembl ID | LncRNA Name | SNP info | Number of Positive corelated Cancer | Positive corelated Cancer | Number of Negative corelated Cancer | Negative corelated Cancer |
| lncRNA regulates differentially expressed genes by function as enhancer. |
| LncRNA Ensembl ID | PC Gene ID | PC Gene Name | Positive correlated cancers | Cancer with PC gene up-regulation | Cancer with PC gene down-regulation |
| LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region. |
| LncRNA Ensembl ID | LncRNA ENST ID | PC Gene Name | PC Gene ID | PC ENST ID | dG | nDG | Cancer with PC gene up-regulation | Cancer with PC gene Down-regulation | | ENSG00000275494 | ENST00000613406 | IQGAP1 | ENSG00000140575 | ENST00000560373 | -0.5206 | 159 | CHOL | - | | ENSG00000275494 | ENST00000613406 | NSD1 | ENSG00000165671 | ENST00000354179 | -0.1004 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | NSD1 | ENSG00000165671 | ENST00000439151 | -0.1004 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | AFAP1 | ENSG00000196526 | ENST00000382543 | -0.2625 | 17 | CHOL | - | | ENSG00000275494 | ENST00000613406 | AFAP1 | ENSG00000196526 | ENST00000614385 | -0.1320 | 441 | CHOL | - | | ENSG00000275494 | ENST00000613406 | KIAA0100 | ENSG00000007202 | ENST00000544884 | -0.1447 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | KIAA0100 | ENSG00000007202 | ENST00000389003 | -0.1447 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | MAP4K3 | ENSG00000011566 | ENST00000414968 | -0.1116 | 169 | CHOL | - | | ENSG00000275494 | ENST00000613406 | MAP4K3 | ENSG00000011566 | ENST00000437968 | -0.1255 | 300 | CHOL | - | | ENSG00000275494 | ENST00000613406 | MAP4K3 | ENSG00000011566 | ENST00000484274 | -0.1321 | 467 | CHOL | - | | ENSG00000275494 | ENST00000613406 | WWTR1 | ENSG00000018408 | ENST00000467467 | -0.1113 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | ICAM1 | ENSG00000090339 | ENST00000423829 | -0.1005 | 45 | KIRC | - | | ENSG00000275494 | ENST00000613406 | RAB3D | ENSG00000105514 | ENST00000589655 | -0.2520 | 424 | CHOL | - | | ENSG00000275494 | ENST00000613406 | GON4L | ENSG00000116580 | ENST00000271883 | -0.1104 | 232 | CHOL | - | | ENSG00000275494 | ENST00000613406 | CS | ENSG00000062485 | ENST00000552222 | -0.1097 | 3 | CHOL | - | | ENSG00000275494 | ENST00000613406 | TP53BP1 | ENSG00000067369 | ENST00000434561 | -0.1213 | 29 | CHOL | - | | ENSG00000275494 | ENST00000613406 | TP53BP1 | ENSG00000067369 | ENST00000467474 | -0.1764 | 160 | CHOL | - | | ENSG00000275494 | ENST00000613406 | ATP11A | ENSG00000068650 | ENST00000487903 | -0.1023 | 1 | CHOL,KIRC,STAD | - | | ENSG00000275494 | ENST00000613406 | ATP11A | ENSG00000068650 | ENST00000375645 | -0.1023 | 1 | CHOL,KIRC,STAD | - | | ENSG00000275494 | ENST00000613406 | ATP11A | ENSG00000068650 | ENST00000375630 | -0.1023 | 1 | CHOL,KIRC,STAD | - | | ENSG00000275494 | ENST00000613406 | ATP11A | ENSG00000068650 | ENST00000471555 | -0.1023 | 1 | CHOL,KIRC,STAD | - | | ENSG00000275494 | ENST00000613406 | ATP11A | ENSG00000068650 | ENST00000419631 | -0.1023 | 1 | CHOL,KIRC,STAD | - | | ENSG00000275494 | ENST00000613406 | ATP11A | ENSG00000068650 | ENST00000415301 | -0.1471 | 1 | CHOL,KIRC,STAD | - | | ENSG00000275494 | ENST00000613406 | MAP4K4 | ENSG00000071054 | ENST00000347699 | -0.1848 | 331 | KIRC | - | | ENSG00000275494 | ENST00000613406 | EVC | ENSG00000072840 | ENST00000509451 | -0.1385 | 84 | CHOL | - | | ENSG00000275494 | ENST00000613406 | NDE1 | ENSG00000072864 | ENST00000574109 | -0.1367 | 1 | CHOL,HNSC | - | | ENSG00000275494 | ENST00000613406 | NDE1 | ENSG00000072864 | ENST00000572967 | -0.4168 | 58 | CHOL,HNSC | - | | ENSG00000275494 | ENST00000613406 | NOTCH3 | ENSG00000074181 | ENST00000595514 | -0.1273 | 11 | CHOL,KIRC | - | | ENSG00000275494 | ENST00000613406 | NOTCH3 | ENSG00000074181 | ENST00000597756 | -0.3223 | 465 | CHOL,KIRC | - | | ENSG00000275494 | ENST00000613406 | DYNC1I2 | ENSG00000077380 | ENST00000410079 | -0.1065 | 280 | CHOL | - | | ENSG00000275494 | ENST00000613406 | DYNC1I2 | ENSG00000077380 | ENST00000409317 | -0.1051 | 143 | CHOL | - | | ENSG00000275494 | ENST00000613406 | DYNC1I2 | ENSG00000077380 | ENST00000445378 | -0.2011 | 451 | CHOL | - | | ENSG00000275494 | ENST00000613406 | SEL1L3 | ENSG00000091490 | ENST00000502949 | -0.1723 | 20 | CHOL,KIRC | - | | ENSG00000275494 | ENST00000613406 | SEL1L3 | ENSG00000091490 | ENST00000507618 | -0.4039 | 39 | CHOL,KIRC | - | | ENSG00000275494 | ENST00000613406 | SUCO | ENSG00000094975 | ENST00000610051 | -0.5871 | 106 | CHOL | - | | ENSG00000275494 | ENST00000613406 | SUSD6 | ENSG00000100647 | ENST00000342745 | -0.1081 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | FLT1 | ENSG00000102755 | ENST00000615611 | -0.3117 | 382 | KIRC | - | | ENSG00000275494 | ENST00000613406 | FLT1 | ENSG00000102755 | ENST00000617835 | -0.3117 | 382 | KIRC | - | | ENSG00000275494 | ENST00000613406 | FLT1 | ENSG00000102755 | ENST00000543394 | -0.3117 | 382 | KIRC | - | | ENSG00000275494 | ENST00000613406 | FLT1 | ENSG00000102755 | ENST00000540678 | -0.5909 | 429 | KIRC | - | | ENSG00000275494 | ENST00000613406 | TMEM87A | ENSG00000103978 | ENST00000568432 | -0.1229 | 145 | CHOL | - | | ENSG00000275494 | ENST00000613406 | ARHGEF18 | ENSG00000104880 | ENST00000319670 | -0.1037 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | ARHGEF18 | ENSG00000104880 | ENST00000359920 | -0.1037 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | ARHGEF18 | ENSG00000104880 | ENST00000594665 | -0.1037 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | ANKRD27 | ENSG00000105186 | ENST00000587352 | -0.1033 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | ANKRD27 | ENSG00000105186 | ENST00000622502 | -0.1033 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | RAI1 | ENSG00000108557 | ENST00000353383 | -0.1324 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | RAI1 | ENSG00000108557 | ENST00000583166 | -1.8150 | 317 | CHOL | - | | ENSG00000275494 | ENST00000613406 | GALNT7 | ENSG00000109586 | ENST00000503213 | -0.1657 | 121 | CHOL | - | | ENSG00000275494 | ENST00000613406 | CORO1C | ENSG00000110880 | ENST00000546705 | -0.1172 | 315 | KIRC | - | | ENSG00000275494 | ENST00000613406 | CORO1C | ENSG00000110880 | ENST00000421578 | -0.4700 | 433 | KIRC | - | | ENSG00000275494 | ENST00000613406 | SPRING1 | ENSG00000111412 | ENST00000548356 | -0.1166 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | SPRING1 | ENSG00000111412 | ENST00000547606 | -0.1166 | 16 | CHOL | - | | ENSG00000275494 | ENST00000613406 | SLC25A36 | ENSG00000114120 | ENST00000453248 | -0.2604 | 61 | CHOL | - | | ENSG00000275494 | ENST00000613406 | ECT2 | ENSG00000114346 | ENST00000441497 | -0.3621 | 1 | CHOL,HNSC,STAD | - | | ENSG00000275494 | ENST00000613406 | GPD2 | ENSG00000115159 | ENST00000438166 | -0.1070 | 50 | CHOL | - | | ENSG00000275494 | ENST00000613406 | GPD2 | ENSG00000115159 | ENST00000409674 | -0.1070 | 50 | CHOL | - | | ENSG00000275494 | ENST00000613406 | GPD2 | ENSG00000115159 | ENST00000409861 | -0.1010 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | PLEKHB2 | ENSG00000115762 | ENST00000438882 | -0.1295 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | PLEKHB2 | ENSG00000115762 | ENST00000404460 | -0.1780 | 81 | CHOL | - | | ENSG00000275494 | ENST00000613406 | DARS1 | ENSG00000115866 | ENST00000422708 | -0.2368 | 199 | KIRC | - | | ENSG00000275494 | ENST00000613406 | WIPF1 | ENSG00000115935 | ENST00000359761 | -0.1092 | 1 | KIRC | - | | ENSG00000275494 | ENST00000613406 | WIPF1 | ENSG00000115935 | ENST00000392546 | -0.1092 | 1 | KIRC | - | | ENSG00000275494 | ENST00000613406 | GPSM2 | ENSG00000121957 | ENST00000441735 | -0.1490 | 305 | CHOL | - | | ENSG00000275494 | ENST00000613406 | LAMC1 | ENSG00000135862 | ENST00000258341 | -0.1093 | 1 | CHOL,HNSC | - | | ENSG00000275494 | ENST00000613406 | ABL2 | ENSG00000143322 | ENST00000512653 | -0.1606 | 163 | CHOL,HNSC | - | | ENSG00000275494 | ENST00000613406 | CEP170 | ENSG00000143702 | ENST00000490813 | -0.1181 | 126 | CHOL | - | | ENSG00000275494 | ENST00000613406 | SLC36A1 | ENSG00000123643 | ENST00000429484 | -0.1642 | 18 | CHOL | - | | ENSG00000275494 | ENST00000613406 | SLC36A1 | ENSG00000123643 | ENST00000616007 | -0.1525 | 212 | CHOL | - | | ENSG00000275494 | ENST00000613406 | SLC36A1 | ENSG00000123643 | ENST00000517628 | -0.1525 | 212 | CHOL | - | | ENSG00000275494 | ENST00000613406 | SLC6A6 | ENSG00000131389 | ENST00000621751 | -0.1011 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | LLGL1 | ENSG00000131899 | ENST00000621229 | -1.4800 | 392 | CHOL | - | | ENSG00000275494 | ENST00000613406 | PTPRE | ENSG00000132334 | ENST00000471218 | -1.9650 | 182 | CHOL,KIRC | - | | ENSG00000275494 | ENST00000613406 | PTPRE | ENSG00000132334 | ENST00000467366 | -1.9650 | 181 | CHOL,KIRC | - | | ENSG00000275494 | ENST00000613406 | CEMIP2 | ENSG00000135048 | ENST00000377043 | -0.1074 | 300 | KIRC,STAD | - | | ENSG00000275494 | ENST00000613406 | TTLL4 | ENSG00000135912 | ENST00000442769 | -0.1150 | 24 | CHOL | - | | ENSG00000275494 | ENST00000613406 | TTLL4 | ENSG00000135912 | ENST00000434241 | -0.1641 | 3 | CHOL | - | | ENSG00000275494 | ENST00000613406 | TTLL4 | ENSG00000135912 | ENST00000417855 | -0.1196 | 326 | CHOL | - | | ENSG00000275494 | ENST00000613406 | FNBP1L | ENSG00000137942 | ENST00000424449 | -0.1172 | 80 | CHOL | - | | ENSG00000275494 | ENST00000613406 | ADCY3 | ENSG00000138031 | ENST00000260600 | -0.1126 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | ADCY3 | ENSG00000138031 | ENST00000606682 | -0.1126 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | ADCY3 | ENSG00000138031 | ENST00000405392 | -0.1126 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | ADCY3 | ENSG00000138031 | ENST00000498288 | -0.1126 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | MYOF | ENSG00000138119 | ENST00000371489 | -0.1643 | 159 | CHOL | - | | ENSG00000275494 | ENST00000613406 | MYOF | ENSG00000138119 | ENST00000371488 | -0.1115 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | ABI2 | ENSG00000138443 | ENST00000430418 | -0.1082 | 114 | CHOL | - | | ENSG00000275494 | ENST00000613406 | ABI2 | ENSG00000138443 | ENST00000425253 | -0.1220 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | ABI2 | ENSG00000138443 | ENST00000413635 | -0.1153 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | ABI2 | ENSG00000138443 | ENST00000454023 | -0.4303 | 271 | CHOL | - | | ENSG00000275494 | ENST00000613406 | CCNG2 | ENSG00000138764 | ENST00000395640 | -0.1092 | 96 | CHOL | - | | ENSG00000275494 | ENST00000613406 | GSTCD | ENSG00000138780 | ENST00000360505 | -0.1286 | 195 | CHOL | - | | ENSG00000275494 | ENST00000613406 | SINHCAF | ENSG00000139146 | ENST00000542983 | -0.2742 | 219 | CHOL,STAD | - | | ENSG00000275494 | ENST00000613406 | ANKRD52 | ENSG00000139645 | ENST00000267116 | -0.1094 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | SLC39A6 | ENSG00000141424 | ENST00000440549 | -1.7433 | 418 | CHOL | - | | ENSG00000275494 | ENST00000613406 | MINK1 | ENSG00000141503 | ENST00000574453 | -0.1145 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | MINK1 | ENSG00000141503 | ENST00000577021 | -0.1057 | 97 | CHOL | - | | ENSG00000275494 | ENST00000613406 | MINK1 | ENSG00000141503 | ENST00000576037 | -0.1407 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | HSPG2 | ENSG00000142798 | ENST00000374695 | -0.1081 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | HSPG2 | ENSG00000142798 | ENST00000374676 | -0.1824 | 78 | CHOL | - | | ENSG00000275494 | ENST00000613406 | HSPG2 | ENSG00000142798 | ENST00000412328 | -0.1876 | 24 | CHOL | - | | ENSG00000275494 | ENST00000613406 | HSPG2 | ENSG00000142798 | ENST00000439717 | -0.1770 | 115 | CHOL | - | | ENSG00000275494 | ENST00000613406 | IGSF3 | ENSG00000143061 | ENST00000318837 | -0.3040 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | TPM3 | ENSG00000143549 | ENST00000302206 | -0.2572 | 36 | CHOL | - | | ENSG00000275494 | ENST00000613406 | RIT1 | ENSG00000143622 | ENST00000539040 | -0.1204 | 1 | CHOL,KIRC | - | | ENSG00000275494 | ENST00000613406 | RIT1 | ENSG00000143622 | ENST00000368322 | -0.1034 | 7 | CHOL,KIRC | - | | ENSG00000275494 | ENST00000613406 | KANSL1L | ENSG00000144445 | ENST00000457374 | -0.2175 | 349 | CHOL | - | | ENSG00000275494 | ENST00000613406 | KANSL1L | ENSG00000144445 | ENST00000452086 | -0.2175 | 349 | CHOL | - | | ENSG00000275494 | ENST00000613406 | VGLL4 | ENSG00000144560 | ENST00000451674 | -0.1658 | 188 | CHOL | - | | ENSG00000275494 | ENST00000613406 | VGLL4 | ENSG00000144560 | ENST00000424529 | -0.1498 | 378 | CHOL | - | | ENSG00000275494 | ENST00000613406 | VGLL4 | ENSG00000144560 | ENST00000426568 | -0.2369 | 179 | CHOL | - | | ENSG00000275494 | ENST00000613406 | VGLL4 | ENSG00000144560 | ENST00000430365 | -0.2369 | 179 | CHOL | - | | ENSG00000275494 | ENST00000613406 | ARHGAP26 | ENSG00000145819 | ENST00000419676 | -0.1292 | 344 | KIRC | - | | ENSG00000275494 | ENST00000613406 | ARHGAP26 | ENSG00000145819 | ENST00000424007 | -0.1421 | 55 | KIRC | - | | ENSG00000275494 | ENST00000613406 | RNF145 | ENSG00000145860 | ENST00000520638 | -0.1365 | 200 | CHOL | - | | ENSG00000275494 | ENST00000613406 | PRIM2 | ENSG00000146143 | ENST00000550475 | -0.1520 | 393 | CHOL,HNSC,STAD | - | | ENSG00000275494 | ENST00000613406 | DIAPH2 | ENSG00000147202 | ENST00000355827 | -0.1246 | 368 | KIRC | - | | ENSG00000275494 | ENST00000613406 | DIAPH2 | ENSG00000147202 | ENST00000373049 | -0.1136 | 155 | KIRC | - | | ENSG00000275494 | ENST00000613406 | DIAPH2 | ENSG00000147202 | ENST00000373054 | -2.5900 | 118 | KIRC | - | | ENSG00000275494 | ENST00000613406 | TACC1 | ENSG00000147526 | ENST00000520340 | -0.3400 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | TACC1 | ENSG00000147526 | ENST00000518415 | -0.1075 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | TACC1 | ENSG00000147526 | ENST00000521866 | -0.1067 | 19 | CHOL | - | | ENSG00000275494 | ENST00000613406 | TMCO3 | ENSG00000150403 | ENST00000473287 | -0.2690 | 403 | CHOL | - | | ENSG00000275494 | ENST00000613406 | FER | ENSG00000151422 | ENST00000438717 | -0.1482 | 347 | CHOL | - | | ENSG00000275494 | ENST00000613406 | CYRIB | ENSG00000153310 | ENST00000615041 | -0.1414 | 48 | CHOL | - | | ENSG00000275494 | ENST00000613406 | RAB11FIP1 | ENSG00000156675 | ENST00000522727 | -0.1615 | 6 | CHOL | - | | ENSG00000275494 | ENST00000613406 | IFNAR2 | ENSG00000159110 | ENST00000382264 | -0.2465 | 430 | KIRC | - | | ENSG00000275494 | ENST00000613406 | IFNAR2 | ENSG00000159110 | ENST00000413881 | -0.3070 | 28 | KIRC | - | | ENSG00000275494 | ENST00000613406 | ITGA5 | ENSG00000161638 | ENST00000435631 | -0.1003 | 1 | CHOL,KIRC,HNSC | - | | ENSG00000275494 | ENST00000613406 | ITGA5 | ENSG00000161638 | ENST00000553071 | -0.1003 | 1 | CHOL,KIRC,HNSC | - | | ENSG00000275494 | ENST00000613406 | SEPTIN8 | ENSG00000164402 | ENST00000378721 | -0.1043 | 76 | CHOL | - | | ENSG00000275494 | ENST00000613406 | YWHAZ | ENSG00000164924 | ENST00000395953 | -0.1802 | 409 | CHOL | - | | ENSG00000275494 | ENST00000613406 | YWHAZ | ENSG00000164924 | ENST00000395948 | -0.1802 | 425 | CHOL | - | | ENSG00000275494 | ENST00000613406 | YWHAZ | ENSG00000164924 | ENST00000395951 | -0.1347 | 419 | CHOL | - | | ENSG00000275494 | ENST00000613406 | YWHAZ | ENSG00000164924 | ENST00000419477 | -0.1641 | 431 | CHOL | - | | ENSG00000275494 | ENST00000613406 | SLFN5 | ENSG00000166750 | ENST00000592325 | -0.2895 | 413 | CHOL | - | | ENSG00000275494 | ENST00000613406 | TPM4 | ENSG00000167460 | ENST00000592822 | -0.2358 | 187 | CHOL | - | | ENSG00000275494 | ENST00000613406 | PROSER3 | ENSG00000167595 | ENST00000620918 | -0.1151 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | PROSER3 | ENSG00000167595 | ENST00000537459 | -0.1228 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | PROSER3 | ENSG00000167595 | ENST00000421853 | -0.1070 | 136 | CHOL | - | | ENSG00000275494 | ENST00000613406 | PROSER3 | ENSG00000167595 | ENST00000539771 | -0.1075 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | PROSER3 | ENSG00000167595 | ENST00000601095 | -0.1057 | 71 | CHOL | - | | ENSG00000275494 | ENST00000613406 | PROSER3 | ENSG00000167595 | ENST00000542134 | -0.1317 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | C2CD3 | ENSG00000168014 | ENST00000414160 | -0.1871 | 327 | CHOL | - | | ENSG00000275494 | ENST00000613406 | ADAM9 | ENSG00000168615 | ENST00000487273 | -0.1160 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | CHST11 | ENSG00000171310 | ENST00000546689 | -0.1110 | 81 | CHOL,KIRC,HNSC | - | | ENSG00000275494 | ENST00000613406 | MBOAT1 | ENSG00000172197 | ENST00000324607 | -0.1525 | 29 | CHOL | - | | ENSG00000275494 | ENST00000613406 | SH3PXD2B | ENSG00000174705 | ENST00000519643 | -0.3050 | 375 | CHOL,KIRC | - | | ENSG00000275494 | ENST00000613406 | B3GNT5 | ENSG00000176597 | ENST00000465010 | -0.1008 | 8 | CHOL | - | | ENSG00000275494 | ENST00000613406 | SMCR8 | ENSG00000176994 | ENST00000406438 | -0.1075 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | KIRREL1 | ENSG00000183853 | ENST00000359209 | -0.1101 | 89 | CHOL,HNSC | - | | ENSG00000275494 | ENST00000613406 | CASP4 | ENSG00000196954 | ENST00000444739 | -0.1007 | 157 | KIRC | - | | ENSG00000275494 | ENST00000613406 | BAZ1A | ENSG00000198604 | ENST00000556314 | -1.7950 | 484 | KIRC | - | | ENSG00000275494 | ENST00000613406 | CEP290 | ENSG00000198707 | ENST00000309041 | -0.1280 | 392 | CHOL | - | | ENSG00000275494 | ENST00000613406 | CEP290 | ENSG00000198707 | ENST00000547691 | -0.1280 | 392 | CHOL | - | | ENSG00000275494 | ENST00000613406 | CEP290 | ENSG00000198707 | ENST00000552810 | -0.1280 | 392 | CHOL | - | | ENSG00000275494 | ENST00000613406 | NUP62 | ENSG00000213024 | ENST00000422090 | -0.1096 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | NUP62 | ENSG00000213024 | ENST00000352066 | -0.1096 | 1 | CHOL | - | | ENSG00000275494 | ENST00000613406 | NUP62 | ENSG00000213024 | ENST00000597029 | -0.1519 | 114 | CHOL | - | | ENSG00000275494 | ENST00000613406 | NUP62 | ENSG00000213024 | ENST00000597723 | -0.1519 | 114 | CHOL | - | | ENSG00000275494 | ENST00000613406 | NUP62 | ENSG00000213024 | ENST00000596217 | -0.1519 | 115 | CHOL | - | | ENSG00000275494 | ENST00000613406 | SOCS7 | ENSG00000274211 | ENST00000613678 | -0.1260 | 296 | CHOL | - | | ENSG00000275494 | ENST00000613406 | ADCY7 | ENSG00000121281 | ENST00000566433 | -1.2300 | 460 | KIRC | - | | ENSG00000275494 | ENST00000613406 | DOCK10 | ENSG00000135905 | ENST00000435582 | -0.1423 | 39 | KIRC | - | | ENSG00000275494 | ENST00000613406 | MCTP2 | ENSG00000140563 | ENST00000543482 | -0.2144 | 72 | KIRC | - | | ENSG00000275494 | ENST00000613406 | ABCA1 | ENSG00000165029 | ENST00000423487 | -0.1012 | 75 | KIRC | - | | ENSG00000275494 | ENST00000613406 | KIF2A | ENSG00000068796 | ENST00000401507 | -0.1367 | 134 | CHOL | - | | ENSG00000275494 | ENST00000613406 | KIF2A | ENSG00000068796 | ENST00000407818 | -0.4750 | 453 | CHOL | - | | ENSG00000275494 | ENST00000613406 | RASAL2 | ENSG00000075391 | ENST00000367649 | -0.1064 | 75 | CHOL | - | | ENSG00000275494 | ENST00000613406 | CAMSAP2 | ENSG00000118200 | ENST00000413307 | -3.5200 | 191 | CHOL | - | | ENSG00000275494 | ENST00000613406 | MIS18BP1 | ENSG00000129534 | ENST00000453142 | -0.1150 | 1 | CHOL | - |
| lncRNA regulates mRNA by competing the miRNA binding site with mRNA. |
| LncRNA Ensembl ID | lncRNA-miRNA-mRNA | Cancer Types |
| ORFfinder result for the gencode.v22.lncRNA.transcript.fa. |
| lncRNA Ensembl ID | lncRNA ENST ID | length(AA) | start at transcript | end at transcript | | ENSG00000275494.1 | ENST00000613406.1 | 69 | 222 | 431 |
|
