 lncRNA targets the enhancer region and positively regulates the gene expression. |
| Only predicted by TDF | | TOR2A,COX4I1,PSPN,C19orf48,MPND,SIPA1,GEMIN6,RHOG,SYMPK,IFI27L2,VMP1,NXT1,UBE2J2,PPP1R16A,RECQL4,SERGEF,RPS24,MAP2K2,ELP5,RPS11,TATDN2,PTRH2,SNRPD2,DUS1L,PSMB7,ALKBH7,TNIP2,SCNM1,B3GALT6,NSMCE1,SDF2L1,DUT,GUK1,PPIH,RRNAD1,UBE2M,FAM207A,MICOS10,FZR1,KRTCAP3,RPS8,LEMD2,MIX23,VPS4A,ATP5MK,RPL13A,ANKMY1,ITPA,ODF3B,WHAMM,NARF,SEM1,CCDC106,NAPRT,CIAO2B,SNF8,MRPS12,COPRS,TIA1,MUTYH,DOHH,CNKSR1,MIEN1,S100A11,SWI5,EIF2B5,ACYP1,RPL27,DYNC2I2,MZF1,SHARPIN,TEDC2,ENDOV,ANKDD1A,TRAPPC2L,ODF2L,JTB,NEDD8,SAP30BP,PSMC3,LRRC29,TMEM91,ZSWIM1,PPP1R14B,SRP19,WDR74,EIF3K,TXNL4A,MROH6,HSPBAP1,UROD,CD2BP2,RETREG3,CTU2,CIR1,SNRNP25,COMMD1,DUS3L,CTU1,ZFYVE19,COMMD5,C1orf50,BCLAF3,HINT2,IMMP1L,PELP1,LRRC45,GNRH1,TMEM134,GFER,ATAT1,SURF2,C18orf21,RAMP2,RECQL5,ZMYND19,RPS27A,SLC12A9,SARS2,TMEM223,CRTC2,ATP5F1E,GTPBP3,CDK2AP2,TMEM44,TIMM10,APTX,CHMP2A,BRMS1,TCF25,MICOS13,EVA1B,STAG3L5P-PVRIG2P-PILRB,KRI1,DDX39A,TPRA1,MRPL57,UXT,DNAJB2,COMMD7,CDAN1,CYBC1,FKBP2,SPATA33,BSG,INPP5E,RNF166,UQCRB,PRR7,RP9,AGPAT2,NASP,UBL7,SAMD1,BANF1,EMG1,B9D2,DAGLB,SVBP,RAB13,VARS2,SART1,TMEM138,QPCTL,DAPK3,LTO1,EGFL7,STYXL1,DTYMK,SAC3D1,TRIP10,CLPP,TMEM258,TPGS1,STX8,FAM71E1,ZBTB8OS,CENPX,TIMM44,PARL,RPL36,NXF1,TMEM208,REEP4,RSAD1,DUSP28,RPL36AL,MRPS15,MICAL1,SSR2,UBXN6,TP53I13,GIPC1,NT5C3B,RPAIN,SURF1,SPATC1L,DCLRE1C,B3GAT3,TMEM11,CARS2,LUC7L2,PFDN2,FRA10AC1,RRAS,SPC24,SNRPB,STAP2,SSU72,RPL23,MVD,CNTROB,MRPL24,IRF3,FAM234A,WDR83OS,ZMAT1,CFAP298,TAZ,RBM6,DEF6,ENKD1,ARHGAP33,MIER2,AGAP6,MCRIP2,DDX49,DHX34,CIRBP,PSENEN,OGFR,RNF215,YPEL3,THAP3,DPH7,SNRPA,GSDMB,SREK1IP1,PMF1-BGLAP,BCL7C,PAXBP1,PHKA2,KAT8,PIGL,RFXANK,NOC4L,ANKRD10,CLASRP,MSTO1,TTLL3,TBC1D17,MYL5,TRABD,WASHC1,BICDL2,POLR2J,CCDC191,USE1,TRADD,DDTL,PSMA2,DDX51,TIMM13,MRPS34,YJEFN3,CLDN15,CENATAC,CXXC1,C19orf18,ZNHIT1,MAPK8IP3,SH3GLB2,CCDC57,KRTCAP2,MZF1,NDUFB7,IDUA,LMF1,CCNL2,SGF29,SERTAD3,BICRA,LIN37,OSGEP,ULK3,LUC7L,YJU2,PLEKHJ1,SAP30BP,OFD1,COPE,PPP1R14B,POU6F1,GADD45GIP1,PPAN,ZNF83,MRPL28,RASSF7,HSF4,CLK2,WDR27,FAM50A,NUTF2,LRP5L,LPAR2,DUS3L,NDUFB8,THOC1,SAFB2,SIRT6,DDX56,ARFRP1,RGL3,CROCC,UBL5,ARFGAP1,NFKBID,WDR83,SLC25A27,TBCB,ETFB,TAF1C,PLEKHO1,SEC31B,ARRDC2,MBD3,RECQL5,ZMYND19,ARPC4,TNK2,GOLGA8B,RBM5,GABBR1,TLE5,NDUFA13,NDUFAF8,LMBR1L,IP6K2,AKT1S1,RNF126,ASIC3,ARHGAP4,ERMARD,IFT27,UQCR11,NOP53,ATP5F1D,PHF1,KAT2A,CENPT,FBXW4,CHKB,KIAA0895L,AGER,TCF25,ANKS3,RABAC1,TIMM17B,TEPSIN,OAZ1,RBM42,GPS2,NAA38,CSAD,PBX4,FKBP2,BAD,COX19,PNKP,RSRP1,GOLGA8A,C19orf73,OGT,ENOSF1,EME2,BOP1,C3orf62,TELO2,MRGBP,XAB2,HDAC10,PPP2R3B,ECHDC2,TSR3,CCDC159,NAA10,SF3A2,NPEPL1,SLIRP,ERCC1,NR2C1,ADAT2,ZNF862,ZNF44,IMP3,MRPL43,LENG1,REX1BD,GNPTG,FAM193B,NEK8,TFPT,PCP2,PQBP1,KLHDC4,SMIM4,IGFLR1,PTCD1,LMNTD2,ATXN7L2,VPS9D1,NPDC1,FBXL8,LZTS2,SS18L2,PARP6,MRPL20,SUGP1,TRA2A,NDUFA3,TSPYL2,ZNF10,PTOV1,PGP,SEPTIN1,C19orf53,ARL16,ORMDL1,ELOF1,PET100,UBXN11,MC1R,CYTH2,BRAT1,NUBP2,CDK11A,SETD4,NOP2,RPS29,CHCHD10,ACAP3,UCHL3,OGFOD3,PRR3,CHKA,SPOUT1,FDX2,PSENEN,ZNHIT2,CLK1,UBOX5,PMF1-BGLAP,PSMB3,DNASE1,RRNAD1,NADSYN1,SLC66A1,HEXD,KCNK6,KLHL17,GPATCH3,MRPL46,RFXANK,ARGLU1,CRYGS,MARCHF9,CCNL1,IFI27L1,TBC1D17,ZMAT5,POLG2,NAPRT,FBXL6,TMC8,TAX1BP3,ACBD6,MAGIX,MPST,DGCR6L,RPS17,SLC25A10,SMDT1,CENPS,ABCA7,AMY2B,KRT10,C1orf122,BORCS6,EIF5B,STK36,MYL6B,UBE2L3,LIN37,BRF1,APRT,TRAPPC14,SYCE1L,TMEM238,CCNQ,MROH6,CRIP2,CPNE1,CLTB,H2AJ,CLK4,AP5Z1,C6orf136,SRM,LAMTOR4,BOLA1,MESP1,VPS16,N4BP2L2,IFFO1,COX6C,LRRC45,BRICD5,RUVBL2,ATAT1,C12orf73,PAQR6,ARPC4,IPO4,RPS19BP1,VKORC1,PRADC1,LSM10,VAMP1,GMFG,AKT1S1,NUDC,CLN3,PRR36,ZGLP1,TRIM52,NDUFS3,ZCWPW1,TBC1D10C,TM7SF2,UQCR10,CCHCR1,NSUN6,ANKRD39,ALKBH2,S100A13,PNISR,COA8,SSR4,PSMD13,UBA52,PNKP,COA3,FAM104B,ENTR1,ACAP1,ANAPC7,RNF25,HHLA3,BOP1,COMMD6,PUSL1,NTHL1,CCDC137,PHF11,STAC3,PMF1,XAB2,UPF3B,MYL6,HSD17B10,HAUS7,FNDC10,EFNA3,CLEC2D,ISOC2,TXNRD2,SH3BGRL3,NR2C2AP,SIRT7,PEX11G,PMVK,FCHSD1,CENPX,FAM229A,PLCB2,PCP2,C20orf96,GSTM2,NDUFA11,CARD16,KXD1,PEDS1,NPIPA5,AP1G2,KLC1,IGFLR1,PTCD1,MRPL20,ZSWIM7,IDH3G,PGP,ASCC2,UBE2G2,PCED1A,HSH2D,COX5A,PET100,UBXN11,VMAC,MAPK11,DGAT1,SLC26A6,CPTP,FAAP100,TOMM40,PTMS,APBB3,KHDC4,FAM234A,TEDC1,PSPN,SNRPD3,PSMG3,HSPBP1,TNFRSF14,OGFOD3,KPTN,CCDC28B,LRRC23,JOSD2,DPP7,SCRN2,COX17,POLM,GEMIN7,FAAP20,FAM98C,NDUFB1,MCRIP2,HRAS,SCAND1,UBXN1,ALKBH7,MRPL41,TSSC4,CHCHD5,COA5,CRIP1,MFSD10,GIGYF1,DPH7,RFNG,PMF1-BGLAP,UBALD1,C12orf57,HEXD,VPS28,RPL35,UBE2M,PEX16,ILKAP,NOC4L,ANKMY1,ODF3B,RABL2A,TRIM11,MYL5,TARBP2,DCAF8,RNASEH2C,POLL,TRADD,RNPEPL1,NDUFB11,TMUB1,PCSK4,DDX51,PPCDC,UQCC2,SLC25A28,MRNIP,C19orf25,EIF2B5,GAMT,CCS,DNAJC4,MRPL52,SMUG1,STK36,SWSAP1,CHTF18,METTL26,PNPLA7,LUC7L,TRIR,MZT2A,LRRC29,PHKG2,METTL17,EPOR,MVB12A,PPAN,RASSF7,CAPN10,HSF4,ERCC5,CCDC24,HEMK1,C16orf74,TMEM259,TMEM234,NDUFB8,NDUFA2,BOLA1,VPS16,ZNF593,NOSIP,RABEP2,PSMG4,NDUFB10,MRPL54,ATP5MC2,KCTD13,C1orf35,HSD11B1L,SURF2,TCEA2,POP5,SHC2,BLOC1S1,NDUFV3,LRRC75B,HDAC8,CCDC12,UQCR11,STK11,NUPR1,PHF1,NDUFC1,TRPT1,CHMP2A,FASTK,TM7SF2,RP11-523H20.5,SPSB2,WDR54,MICOS13,PLA2G6,CFAP410,TIMM17B,CERS5,MTLN,COA8,MTG1,PYURF,SPATA2L,ACBD4,MRPS25,RNF25,ATP5IF1,MRPL55,PHYKPL,RAB4B,MZT2B,MIIP,ABTB1,PGGHG,PIDD1,YBEY,PMF1,TMEM175,MOB2,LAMTOR2,C7orf50,DTX3,ARMC5,AMT,COMTD1,SYNE4,CZIB,CLPP,FBXO44,PYM1,PFDN5,COPS9,SERF2,NMRAL1,SDHAF2,MICALL2,MYG1,NDUFA11,PQBP1,TMEM208,ATG4B,COX6B1,DPM2,KLC1,CRACR2B,ATP5MJ,POLR2L,LMNTD2,MRPS26,FBXL8,NUDT14,ANKRD13D,TMEM160,CLK3,SURF1,EPS8L1,TAF10,RHPN1,PPOX,SIGIRR,SAMD10,NDUFS6,LUC7L2,PGLS,PCED1A,NPRL2,VMAC,PPP1R12C,SCNN1D,GATD1,ORAI3,HDHD3,CTBP1,CNTROB,NAA38,APBB3,ELMO3,BCS1L,BABAM1,TEDC1,NOP2,LIN7B,MPND,SIPA1,VMP1,SNRPD3,DHPS,ENKD1,PFN1,PSMB1,ATF4,LRRC23,HDAC7,USF1,MRPL27,PTRH2,TMA7,ESS2,SNRPD2,DDX49,THYN1,NSMCE4A,MRPL22,CENPB,SLC25A39,CIRBP,FDX2,EIF3B,ABHD12,HOOK2,P2RY11,RPL36A,GPATCH3,ARF5,SPAG7,PPIE,FZR1,WDR45,ARVCF,DECR2,DENND6B,RFXANK,EMC9,ANKMY1,HOMER3,AAMDC,TBC1D17,MYPOP,ZMAT5,CNFN,TFEB,RING1,FAM3A,AUP1,TMEM86B,RRP7A,NOL3,SPG7,CDPF1,MRPS12,DOHH,RNPEPL1,ZNF84,UNC13D,EIF3G,EXD3,SMG9,ROGDI,FKBP8,PLEKHH3,MAPK8IP3,MYL6B,NDUFS8,VCPKMT,NEDD8,LTB4R,COPE,PIH1D1,EPOR,GDPD3,HSCB,MRPL2,C8orf58,HSF4,RTRAF,ELMOD3,PAF1,ARHGEF1,PAFAH1B3,LPAR2,MOSPD3,NELFE,PSMA4,CHADL,CASTOR1,RGL3,FAM174C,R3HDM4,TBCB,ETFB,RPS28,MAP2K7,FAM228B,PCBP4,PA2G4,RBM33,TECR,SARS2,TRMU,LSM2,NDUFA13,AARSD1,NDUFAF8,FIZ1,CWC15,AKT1S1,NUDC,HSPB11,JMJD4,ARHGAP4,C20orf27,ZBTB3,PCSK1N,ABHD14A,AP2S1,SLC25A29,FAM160B2,SRRT,NDUFA7,UQCR10,NME4,RP11-523H20.5,DXO,SPSB2,WDR54,BUD23,ZNF18,NR2F6,WDR59,TEPSIN,BCAT2,YAE1,NDUFAF5,SSR4,MTG1,RPL37A,NOL12,PNKP,PSMC5,PSME2,CPSF1,IRF7,PPP1R7,EME2,RAB4B,HMGN3,CCDC137,NFKBIL1,SNU13,CYBA,STX10,XAB2,MTG2,QPCTL,MYL6,TSR3,PAM16,NAA10,NUDT18,RBM26,CYHR1,DEAF1,TIGD1,GNPTG,MCRIP1,NUDT1,SRA1,SMIM22,TFPT,DMPK,NOXA1,CDK5RAP1,TIMM44,MTIF3,PCP2,NXF1,SPRN,TXN2,EIF2B4,UFD1,DUSP28,C19orf44,MAD1L1,CBY1,NAT14,POLR2I,DYRK4,TRIOBP,NAA80,NAT9,PRAF2,CDC37,ANKRD54,PFDN6,IDH3G,SAMD10,ACD,REXO4,PET100,VMAC,RHBDD3,MCAT,STAP2,MYDGF,SLC35C2,LSM4,CCDC34,MVD,GSDMD,ABHD11,RASSF1 | | Exist in public source | | NA |
| lncRNA targets the promoter region and positively regulates the gene expression. |
| Only predicted by TDF | | PPP1R14B,DPH7,KRTCAP2,CENPB,NUDC,TIMM8B,PMF1,PEX16,TPGS1,PSMB3,PEX11G,NUPR1,PGLS,FAM110A,PDDC1,RNF113A,OFD1,STX16,TBC1D10C,PQBP1,TNFSF12,HEMK1,GPATCH3,SH3GLB2,EIF3G,JOSD2,DGCR14,RGL3,FKBPL,RABL2A,PIH1D1,COMMD6,TATDN2,COX6A1,DAGLB,ZNF44,IDNK,MAPK8IP3,MYDGF,MIIP,VMAC,MZF1,HINT2,JTB,C3orf62,TIMM10,ANKRD54,ZSWIM1,FAM160B2,MYL5,SNRPD3,TMEM44,C14orf2,CPNE1,CARD16,NDUFB11,NMB,MARCH9,TBKBP1,MRPS34,RBMX2,PPCDC,NT5C,LEMD2,FAM234A,SYMPK,ARRDC2,RPL35,UQCC2,POLR2J,PTCD1,HCFC1R1,MAP2K2,GADD45GIP1,PLCB2,CAPNS1,ARGLU1,ATP5I,COX4I2,AP4B1,FKBP8,TAZ,DCAF8,YDJC,ZNF18,ROGDI,ATAT1,COMTD1,DHPS,PTMS,DMPK,CLPP,WDR45,PFDN4,TMEM91,HSH2D,HDHD3,MRPL52,UBXN1,COX7C,IGFLR1,RPL23,VARS2,CRTC2,NARF,RING1,ACTL10,NOSIP,KLHDC4,PSMB6,UBXN6,SPC24,ZNHIT2,AIP,DYRK4,ICT1,GFER,NDUFB1,C8orf58,CLASRP,PSMD4,CDC34,LSM2,RAD9A,NOL3,UBALD2,TMEM88,CXXC1,QTRT1,PAXBP1,INO80E,PCSK1N,ABHD12,ARHGEF1,NENF,RBM42,KCNK6,ACCS,ZSWIM7,ENGASE,CLTB,DHX34,SAT2,FAM127B,TFEB,OGFOD3,KLHDC9,FBXL8,C19orf25,IFI27L1,GSTM2,SCNM1,ATPIF1,RHBDD3,S100A13,SPAG7,CYTH2,COMMD3,ING5,WDR13,PPAN,C12orf45,BABAM1,AARSD1,POP5,MZT2A,SGF29,ZMYND19,MROH6,TRIM11,SLC25A10,WDR83,NMRAL1,C9orf16,NPDC1,POU6F1,TNIP2,DGAT1,RP9,MSTO1,ECHDC2,ZMAT1,SWSAP1,GPX4,TXNL4A,TRMU,SVBP,PSMB4,POLM,C19orf44,NSMCE1,SAMD1,ZNF83,GLTSCR2,MRPL20,EVL,ITPA,PHYKPL,PRPF3,PRR36,CNFN,PRR7,C7orf43,DCLRE1C,SHFM1,TIMM17B,THAP3,VPS28,OSGEP,COX17,LAMTOR4,NDUFB10,OCEL1,C6orf203,SLC25A14,BANF1,FAM71E1,PRR5,B9D2,HSCB,EIF5B,RNF126,SURF1,SPRN,PBX4,GGA1,CPSF1,CCDC130,CWC15,FAM195B,C21orf59,TRIOBP,RAB4B,NR2C2AP,CCNL1,FAAH,PRKRIP1,ARIH2OS,PPP1R12C,RBM6,ALKBH2,TIMM44,C20orf96,PRR3,NUDT1,UBOX5,UBA52,PLEKHH3,CDK5RAP1,ANKRD39,UXT,CNPY3,MRGBP,GUK1,ABHD11,DTX2,DDX49,OXLD1,PMF1-BGLAP,LPAR2,VPS16,TCF25,EPOR,HSPBAP1,NR2F6,ELOF1,LSM10,TIA1,RBM5,BCAT2,PSMB1,NME3,C9orf114,DOHH,IL3RA,ACAP1,C2orf81,C7orf50,ATP5D,CCDC64B,AP1G2,USF1,TPRA1,B4GALT7,ENOSF1,NADSYN1,TMEM160,DNAJC4,FRA10AC1,C14orf79,NDUFA1,UBE2S,SSR2,VAMP1,AURKAIP1,GAMT,ADCK5,RPSA,KIAA0907,SRSF5,SSU72,NDUFA3,PRR14,PSMA4,PSMA2,SETD4,H2AFX,CCDC137,C19orf18,KPTN,NDUFS5,PTOV1,MICALL2,HSF4,RRP7A,MINOS1,TOR2A,KRI1,IDUA,RRAS,NUP85,COPE,EME2,UCHL3,SLC25A27,TRMT112,USMG5,ERMARD,FAM167B,CIRBP,ZNHIT1 | | Exist in public source | | NA |
| lncRNA targets the promoter region and negatively regulates the gene expression. |
| Only predicted by TDF | | RAB18,WBP11,C16orf72,M6PR,GIGYF2,CLTC,CCNT1,NUP98,NOC3L,MMGT1,BAZ2A,VPRBP,SMARCA5,STRN3,RASA1,LMBRD2,SMARCA2,CASC4,EDEM1,FAN1,FAM91A1,ITGAV,CDC5L,FITM2,SIRT1,HUWE1,ANKRD40,ZNF106,DCTN1,GTF3C2,IARS,KLHL9,DIP2B,USP32,EP300,TANGO6,NSUN3,TMEM30A,ATF1,TSN,ZFR,PCMT1,HS2ST1,LDOC1L,UBXN7,CDK17,NUS1,DNM2,AP5M1,ENPP4,CTSO,SLC30A7,BCKDHB,LRCH1,EEF1A1,SLC30A6,KAT5,UHRF1BP1,PTPN9,FBXO8,EVI5,CCT5,ERCC4,SKIV2L2,USP10,FAM208A,EXD2,RAPGEF1,CANX,TAB2,MFAP3,LRRC58,NEK1,METTL13,PRDX3,PDCD10,MRPL44,KIAA1109,EXOC5,PRKD3,ALKBH1,WNK1,KPNA1,FAM168A,DNAJC16,OS9,TMED5,FBXL14,DHX15,LANCL1,SH3GLB1,BCL9L,MRPL49,TM9SF4,EPS15,MED21,MED1,HMGN4,OSBPL8,SRPK2,UBR3,FAM161B,IKBKG,SRP72,DPH3,CTDSP2,GORASP2,SEC22B,CDC27,PDZD8,APPL1,KIDINS220,COL4A3BP,TXNDC5,TPR,ZDHHC2,DCLRE1B,CDK4,SOCS5,NUBPL,WDR7,RP2,MED13L,SPTLC1,LPCAT3,XPO4,TOP2B,RALBP1,SPRED2,LTN1,REST,TMED2,APP,ARL13B,PITPNA,GRB2,ABCB10,GCLM,MMADHC,METTL2A,GEMIN5,FER,NCK1,NPEPPS,IRF2BPL,HAUS2,ADH5,RNF19B,SLK,ERAP1,CRKL,DHX29,TRIM44,DIEXF,ADAT1,SLC4A1AP,SYNJ1,GNPTAB,ATP2C1,GGCX,ARF6,ZC3H15,ASXL2,SPG20,ITPRIPL2,CAPZA2,PPARA,USP12,ATAD1,RPS6KC1,TMEM33,CPSF2,EXOC6B,STAU1,CAT,PSMD10,ELMSAN1,SEC23IP,MTM1,KIF2A,ACBD3,PDSS2,ZNF330,PIK3R4,USF3,HLTF,PFAS,COG6,MARS2,LYPLA1,GLYR1,DDX46,GCC1,FNDC3B,BDP1,PRRC2C,MAPK1,AKAP11,GFM2,GSPT1,DDX24,ELF1,GTF2I,CCDC6,LPIN2,UEVLD,BCL2L13,CEPT1,TOR1AIP1,ARHGAP5,GPN1,CSDE1,TPM3,TTC5,CLIC4,PATL1,G3BP2,SLC35A3,DUSP3,PRRC2B,PARP4,HSPG2,TXNRD1,DHX9,PI4KA,ZBTB6,DDX1,ERC1,SEC24B,KDM5A,PAFAH1B1,CTR9,AMBRA1,SEPP1,ACLY,SETD7,SMAD1,UBAP2L,INCENP,KLHL28,RPAP3,KAT7,PIK3CB,CNNM4,SMG1,MAP3K2,GPD2,CDK12,CERS6,LONP2,BPTF,ARFGEF1,GNG12,TMBIM6,SLC39A10,QKI,GCN1,RABL3,MSN,IPP,MOB1A,CLCN3,RCHY1,CCT4,ZNF720,TAF2,CLOCK,DYNC1LI2,PJA2,KPNA6,USP4,RSPRY1,EIF4G2,MAT2B,VAPB,PIK3C3,PTPRA,MTPN,ASCC1,FAM179B,ERMAP,WDR3,MCMBP,CDYL,CDC40,SEC31A,TUBGCP3,WDFY3,TMEM131,HEATR6,GOLPH3,ARL1,SLC35F5,SERINC5,TOPBP1,NIPA2,CSNK1A1,KIF5B,TRAPPC10,ADSS,ESYT1,AP3D1,PREPL,ADAM10,SPTY2D1,XPC,STAM,EFR3A,ARFGEF2,TGDS,NGRN,PRRC2A,SLC25A24,VDAC2,SOCS6,ACTR2,KAT2B,PRMT5,TGFBRAP1,UBR5,TWF1,KDM4A,ELMO2,NUP155,VPS37A,NDFIP2,SH3BP5,ANKFY1,FOXJ3,RLIM,WDR43,NAA30,CHUK,PRMT6,STAMBP,RB1,DPYD,SLC9A6,ZCCHC11,NEK4,CSE1L,KIAA1143,C6orf106,RBM27,PROSC,ZYG11B,DCAF7,SERINC1,ATXN1L,DNAAF2,PPAT,RAB6A,ERLIN2,SMARCC2,LEMD3,ACACA,ZFYVE9,FAM73A,SF3A1,CKAP2,TBC1D23,MID2,GBE1,SDAD1,NBAS,VPS4B,PPIL4,YIPF5,PPID,ITCH,UBQLN2,MAPRE1,ACTN4,GNG10,EPRS,LIN54,EPG5,FBXO11,AIDA,UHRF1BP1L,TAF1B,FAM114A2,CCNYL1,YME1L1,RAB3GAP1,SACM1L,PAK2,ST13,SPG11,PPP6R1,C12orf49,RAB10,ETV3,C5orf51,RIF1,GART,NCOR1,FBXL3,CCT2,GPN3,NEK7,PRRC1,SCFD2,DNMT1,NARS,HYOU1,MIS18BP1,COPA,SUZ12,VTA1,ZNF41,ACBD5,SSFA2,CAD,LZIC,GIT2,PDLIM5,POLA1,CDC23,RAB3GAP2,NRAS,AMFR,SAP130,SDHC,OSBPL11,PCCB,NAA50,GNS,BRPF3,GOLGA5,CHD8,MR1,IPO5,GXYLT1,CLPX,FASTKD5,GOLGA7,KLHL20,C18orf25,PRKAA1,RANBP2,POM121,NMD3,FAM175B,CPD,GNA13,IPO7 | | Exist in public source | | NA |
| lncRNA targets the 3'UTR region and negatively regulates the mRNA. |
| Only predicted by lncTar | | PREPL,IDH3A,NEK4,PSMD2,AP5M1,ARID1A,RNF123,BECN1,RDX,QSER1,PPP1R12A,GNL3L,TPM3,CAD,KIAA1109,STAU2,TBC1D15,EDEM1,FRG1BP,RAB7A,EIF4G1,C11orf58,CREBBP,MAT2B,PBRM1,ANKRD28,PSMC1,HEATR6,SRP72,MAN1A2,GMPS,L2HGDH,ATP11B,PRRC2C,SNX19,VPS35L,PDPK1,ACBD5,ARFIP1,PHF3,PAK2,CPEB4,LONP2,TMEM127,CDK4,STRN,RPRD1B,PHF20,LRP10,KIDINS220,CDC27,TMCO3,RNF31,CLASP2,GANAB,SEC23A,JKAMP,MKLN1,TXNRD1,PSME3,KLF13,SMAD1,KIF21A,TM9SF1,AGFG1,MYCBP2,NBAS,GPD2,TM7SF3,ZFAND3,TANGO6,TP53BP2,BRMS1L,YAP1,ARL1,MSH6,MAIP1,GTF3C3,ATP5F1B,OSBPL8,NCOA4,AZI2,SELENOT,DCP1A,ACTR2,DCAF7,VAMP7,GPATCH8,MRPL49,NSF,ACTR8,SEC23B,FASTKD2,MED1,GTF2I,NUP58,HBP1,EIF4G2,CD46,CDC23,NAA50,CUL2,CAB39,HUWE1,PRKAR1A,PLIN3,MMUT,CPD,GTPBP8,BTD,ATF1,FNDC3B,UBFD1,ADAT1,BCKDHB,FYCO1,HMGCR,NOMO2,RAP1GDS1,PARP1,TMEM87B,FAM168B,SINHCAF,DLST,PNPO,VPS4B,HACD3,PMM2,PFKM,NAF1,REV1,FRS2,TOM1L1,FAM104A,DNM2,EDC4,UBXN7,NPEPPS,GBA,GMPR2,RCHY1,BZW1,TUT4,SLAIN2,PPP6R1,ATP6V0C,CANT1,PUM1,MAN2A2,OS9,SEC24B,RABL3,GLB1,CTNNB1,BCL2L13,EXOC7,AP3D1,RNF111,TP53BP1,VPS37A,PPIP5K2,USP32,SNX30,G3BP1,LLGL1,DHX38,MORF4L1,FERMT2,STAT3,DNMT1,PRMT5,SRP54,TWF1,DDX3X,IPO5,ASXL2,ALAS1,TARS1,POLR2B,FRYL,CYRIB,UBIAD1,BAZ2A,PIKFYVE,HSPG2,SLC35A5,RAB18,GNPTAB,CFL2,USP19,LIG3,UGP2,RAP1B,WDR7,GALK2,KDSR,TMEM131,USP46,SMG6,ADNP2,KIAA0232,NUP98,KIAA0586,TAF6,TRIP12,AKAP10,TM9SF4,GTF2A1,TFIP11,GGCX,PRKAA1,SMAD5,CSNK1A1,TUBGCP3,CTNNA1,ELF1,MOSPD2,RPE,VRK2,GCC2,TEX2,MED21,PDCD10,HEATR5A,FEM1B,AMBRA1,RUSF1,PAFAH1B1,TMBIM6,MPRIP,CTDSP2,ATXN10,MLH1,NCOR1,EMC1,TAF5L,SCAF11,CNOT1,DIABLO,NF1,TRAP1,CEBPZ,MYH9,SLC11A2,FCF1,SERINC5,NUP155,DNAJC16,DAG1,SEPTIN10,ACTR3,UBR1,NOP9,CHD8,TSR1,PNPT1,STAMBP,KAT5,KIAA0100,IARS1,MAP3K2,CDV3,ERBIN,CAP1,SMC4,PDHX,WASF2,VGLL4,MACF1,SH3GLB1,NBR1,THTPA,KTN1,RRN3,PTPN4,FARP2,UBE2D3,DYNC1I2,NEK9,DOCK7,SEPTIN11,RPAP3,ELK1,RFFL,CLIP1,SART3,RNF19B,API5,RAI1,ATF2,NCOA2,SNAP23,PRKDC,BCL2L2,AP2B1,UBR5,CNIH1,PRKAR2A,TBC1D2B,RAB5C,ACTR10,SSR1,LARP4,USP9X,C1orf109,RHBDD1,WNK1,CHURC1,TMLHE,KLHL5,KPNA3,EPS15,ASCC3,RPN2,PPARA,GALC,NUBPL,SNX2,KIF2A,PPP2R5C,REST,EIF3L,HAUS4,SOS2,LARS2,CS,BACE1,POLK,ACTN4,BRF2,DCAF17,DYRK1A,BLOC1S6,CARM1,ABCE1,FAM114A2,ITFG1,USP14,ECD,SPG11,FAM172A,ASNSD1,GLYR1,IBTK,FER,CMIP,GSK3B,QKI,GTF3C2,VPS26C,DENND4C,CEP170,RNF4,NT5C2,ZMYND11,HIPK1,RNF40,QTRT2,EPB41,PI4KA,PSEN1,CEP104,RRM1,TRIM37,MCM3AP,PLEKHB2,AMN1,GPN1,CLTC,ATRN,AP1AR,NAA35,PARG,SDHC,ATP2A2,ALG12,SMIM14,PIK3C3,ANKRD50,CCDC47,BIRC2,CSDE1,HSPA8,SNX29,ABCB7,APAF1,ASCC1,CDYL,BBX,TAF1,ERLIN2,CCT5,UBR4,IQGAP1,SMARCA2,SLMAP,CIPC,STRAP,RFX5,LYPLA1,SLC25A25,ARHGAP5,CLCC1,MFSD14A,INO80,IKBKG,ILRUN,COPB2,SEC14L1,ADD1,NIPA2,ARSB,ZFYVE1,CCT2,VEZT,DYNC1LI2,KBTBD4,SLC25A13,MIDEAS,ZNF106,PEX26,APP,RASA1,STT3A,CERT1,PTPN9,MBTPS1,SF3A1,ARMC8,SEPTIN2,DDB1,ABHD5,FAM118B,TAF1B,PSMD10,SYNJ1,TBC1D23,PIGN,ITGA6,TNPO1,PAIP2,RHOT1,NEK7,UTP18,GRB2,SDHA,HEATR5B,ACADM,SEC31A,ZNF28,ARL2BP,DENND5A,BDP1,SYNRG,EVC,SLC30A7,USP10,KIAA1191,AFAP1,MCFD2,NDUFS1,SLC39A6 | | Exist in public source | | NA |
| lncRNA targets the skipped exon region. | | -lncRNA and exonskipping events are positively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | ORF mutation |
| -lncRNA and exonskipping events are negatively correlated. |
 |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | LOF | | ENSG00000274383 | ENST00000619654 | exon_skip_41813 | chr10:68337857-68337996 | -15.18 | -0.1419 | HNRNPH3 | ENST00000265866 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_309204 | chr19:49181348-49181461 | -14.86 | -0.1790 | TRPM4 | ENST00000252826 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_380242 | chr3:186784961-186785101 | -16.16 | -0.1525 | EIF4A2 | ENST00000323963 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_382458 | chr3:38131595-38131638 | -7.66 | -0.2016 | ACAA1 | ENST00000333167 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_444499 | chr5:138164086-138164133 | -6.31 | -0.1705 | BRD8 | ENST00000254900 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_9446 | chr1:147270931-147271005 | -6.77 | -0.1410 | CHD1L | ENST00000369258 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_29583 | chr1:114780109-114780215 | -12.90 | -0.1330 | SIKE1 | ENST00000060969 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_53559 | chr10:101793912-101793998 | -9.79 | -0.1255 | OGA | ENST00000361464 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_66482 | chr11:126274926-126275021 | -11.02 | -0.1224 | FOXRED1 | ENST00000263578 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_87733 | chr12:120571190-120571291 | -11.28 | -0.1312 | RNF10 | ENST00000325954 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_92074 | chr12:50142052-50142110 | -6.13 | -0.5108 | CERS5 | ENST00000317551 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_95407 | chr12:95040475-95040597 | -14.10 | -0.1282 | NR2C1 | ENST00000333003 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_95500 | chr12:96003837-96003920 | -8.65 | -0.1068 | LTA4H | ENST00000228740 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_139933 | chr16:90035632-90035687 | -7.83 | -0.1631 | GAS8 | ENST00000268699 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_290158 | chr17:42953723-42953778 | -6.99 | -0.1626 | AARSD1 | ENST00000427569 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_292904 | chr17:69251746-69251866 | -9.83 | -0.1013 | ABCA5 | ENST00000392676,ENST00000588877 | In-frame | | ENSG00000274383 | ENST00000619654 | exon_skip_300663 | chr19:1425877-1425960 | -8.35 | -0.1415 | DAZAP1 | ENST00000233078 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_302168 | chr19:10680345-10680443 | -11.24 | -0.1519 | ILF3 | ENST00000590261 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_319223 | chr19:43526200-43526349 | -17.31 | -0.1442 | ETHE1 | ENST00000292147 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_324294 | chr2:27774423-27774530 | -9.73 | -0.1093 | MRPL33 | ENST00000296102 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_349646 | chr20:25207075-25207397 | -29.47 | -0.1543 | ENTPD6 | ENST00000376652 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_353131 | chr20:58669290-58669453 | -23.42 | -0.1735 | STX16 | ENST00000371141 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_370518 | chr22:50247691-50247776 | -12.87 | -0.1629 | HDAC10 | ENST00000216271 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_374497 | chr3:49999439-49999513 | -10.78 | -0.1684 | RBM6 | ENST00000266022 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_377198 | chr3:123130479-123130616 | -15.91 | -0.1187 | PDIA5 | ENST00000316218 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_445390 | chr5:150403120-150403312 | -20.43 | -0.1327 | CD74 | ENST00000009530 | In-frame | | ENSG00000274383 | ENST00000619654 | exon_skip_476549 | chr7:76013741-76013887 | -16.45 | -0.1337 | STYXL1 | ENST00000248600,ENST00000359697,ENST00000431581 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_511212 | chrX:71555189-71555385 | -22.71 | -0.1165 | OGT | ENST00000373719 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_374581 | chr3:50110378-50110463 | -12.16 | -0.1961 | RBM5 | ENST00000347869 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_514339 | chrX:23713134-23713208 | -9.43 | -0.1813 | ACOT9 | ENST00000336430 | Frame-shift | | ENSG00000274383 | ENST00000619654 | exon_skip_97655 | chr12:120579773-120579923 | -12.58 | -0.1066 | POP5 | ENST00000357500 | In-frame | | ENSG00000274383 | ENST00000619654 | exon_skip_52671 | chr10:97461495-97461622 | -17.30 | -0.1559 | MMS19 | ENST00000370782,ENST00000438925 | Frame-shift |
| lncRNA targets by miRNA. |
| LncRNA Ensembl ID | miRNA ID | LncRNA ENST ID | Binding site in lncRNA | Score | Energy | Align Len | Public source |
| RNA A-to-I editing events in lncRNA. |
| LncRNAediting ID | LncRNA Ensembl ID | Chromosome | Editing Position | Strand | Gene Type | Gene Name | Transcript ID | Transcript Type | Transcript Name |
| Edited-associated DElncRNAs in cancer. |
| LncRNA Ensembl ID | LncRNA Index | Cancer Type | Chr_Postion_Strand | AVE1 | AVE2 | log2FC | W-value | P-value | Adjc.p-value | Change |
| Correlation between RNA A-to-I editing events's frequecy and lncRNA expression. |
| LncRNA Ensembl ID | LncRNA Index | Correlation | P-value | Adjc.p-value |
| Cis-expression quantitative trait loci(cis-eQTL) of lncRNA. |
| LncRNA Ensembl ID | LncRNA Name | SNP info | Number of Positive corelated Cancer | Positive corelated Cancer | Number of Negative corelated Cancer | Negative corelated Cancer |
| lncRNA regulates differentially expressed genes by function as enhancer. |
| LncRNA Ensembl ID | PC Gene ID | PC Gene Name | Positive correlated cancers | Cancer with PC gene up-regulation | Cancer with PC gene down-regulation |
| LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region. |
| LncRNA Ensembl ID | LncRNA ENST ID | PC Gene Name | PC Gene ID | PC ENST ID | dG | nDG | Cancer with PC gene up-regulation | Cancer with PC gene Down-regulation | | ENSG00000274383 | ENST00000619654 | IBTK | ENSG00000005700 | ENST00000503631 | -0.7743 | 365 | - | CHOL | | ENSG00000274383 | ENST00000619654 | IBTK | ENSG00000005700 | ENST00000510291 | -0.7743 | 374 | - | CHOL | | ENSG00000274383 | ENST00000619654 | LARS2 | ENSG00000011376 | ENST00000414984 | -0.2012 | 397 | - | CHOL,KIRC | | ENSG00000274383 | ENST00000619654 | NDUFS1 | ENSG00000023228 | ENST00000449699 | -0.1818 | 433 | - | CHOL,KIRC | | ENSG00000274383 | ENST00000619654 | NDUFS1 | ENSG00000023228 | ENST00000432169 | -0.1818 | 433 | - | CHOL,KIRC | | ENSG00000274383 | ENST00000619654 | NDUFS1 | ENSG00000023228 | ENST00000456284 | -0.1096 | 342 | - | CHOL,KIRC | | ENSG00000274383 | ENST00000619654 | RNF123 | ENSG00000164068 | ENST00000327697 | -0.1535 | 313 | - | CHOL | | ENSG00000274383 | ENST00000619654 | RNF123 | ENSG00000164068 | ENST00000432042 | -0.1973 | 357 | - | CHOL | | ENSG00000274383 | ENST00000619654 | RNF123 | ENSG00000164068 | ENST00000443204 | -0.1563 | 187 | - | CHOL | | ENSG00000274383 | ENST00000619654 | RNF123 | ENSG00000164068 | ENST00000433785 | -0.1535 | 314 | - | CHOL | | ENSG00000274383 | ENST00000619654 | CFL2 | ENSG00000165410 | ENST00000555765 | -1.3000 | 348 | - | CHOL,BLCA,UCEC,PRAD,COAD,STAD,READ | | ENSG00000274383 | ENST00000619654 | CFL2 | ENSG00000165410 | ENST00000556161 | -1.3400 | 285 | - | CHOL,BLCA,UCEC,PRAD,COAD,STAD,READ | | ENSG00000274383 | ENST00000619654 | DAG1 | ENSG00000173402 | ENST00000435508 | -0.2229 | 395 | - | KIRC | | ENSG00000274383 | ENST00000619654 | TANGO6 | ENSG00000103047 | ENST00000561856 | -0.1046 | 226 | - | CHOL | | ENSG00000274383 | ENST00000619654 | SLC25A13 | ENSG00000004864 | ENST00000472162 | -0.2010 | 448 | - | CHOL | | ENSG00000274383 | ENST00000619654 | ALAS1 | ENSG00000023330 | ENST00000493402 | -0.4012 | 426 | - | CHOL,KIRC | | ENSG00000274383 | ENST00000619654 | FERMT2 | ENSG00000073712 | ENST00000399304 | -0.1333 | 386 | - | CHOL,BLCA,UCEC,PRAD,COAD,STAD,READ | | ENSG00000274383 | ENST00000619654 | BCKDHB | ENSG00000083123 | ENST00000369760 | -0.2941 | 252 | - | CHOL,KIRC | | ENSG00000274383 | ENST00000619654 | L2HGDH | ENSG00000087299 | ENST00000261699 | -0.1770 | 481 | - | CHOL,KIRC,KIRP | | ENSG00000274383 | ENST00000619654 | L2HGDH | ENSG00000087299 | ENST00000555423 | -0.2143 | 416 | - | CHOL,KIRC,KIRP | | ENSG00000274383 | ENST00000619654 | L2HGDH | ENSG00000087299 | ENST00000555610 | -0.1070 | 216 | - | CHOL,KIRC,KIRP | | ENSG00000274383 | ENST00000619654 | CNIH1 | ENSG00000100528 | ENST00000557690 | -0.1164 | 404 | - | CHOL | | ENSG00000274383 | ENST00000619654 | CNIH1 | ENSG00000100528 | ENST00000556113 | -0.1551 | 395 | - | CHOL | | ENSG00000274383 | ENST00000619654 | LONP2 | ENSG00000102910 | ENST00000535754 | -0.1104 | 332 | - | CHOL | | ENSG00000274383 | ENST00000619654 | LONP2 | ENSG00000102910 | ENST00000416006 | -0.1479 | 355 | - | CHOL | | ENSG00000274383 | ENST00000619654 | ACBD5 | ENSG00000107897 | ENST00000375888 | -0.1425 | 356 | - | CHOL | | ENSG00000274383 | ENST00000619654 | PDHX | ENSG00000110435 | ENST00000526309 | -0.8900 | 14 | - | CHOL | | ENSG00000274383 | ENST00000619654 | HMGCR | ENSG00000113161 | ENST00000509085 | -0.1112 | 281 | - | CHOL,KIRC,KIRP | | ENSG00000274383 | ENST00000619654 | HMGCR | ENSG00000113161 | ENST00000511986 | -0.1064 | 304 | - | CHOL,KIRC,KIRP | | ENSG00000274383 | ENST00000619654 | PRKAR2A | ENSG00000114302 | ENST00000437821 | -0.6114 | 363 | - | CHOL | | ENSG00000274383 | ENST00000619654 | GGCX | ENSG00000115486 | ENST00000430215 | -0.1320 | 327 | - | CHOL | | ENSG00000274383 | ENST00000619654 | DNAJC16 | ENSG00000116138 | ENST00000472665 | -0.1367 | 360 | - | CHOL,KIRP | | ENSG00000274383 | ENST00000619654 | CEP104 | ENSG00000116198 | ENST00000438539 | -0.1303 | 353 | - | CHOL | | ENSG00000274383 | ENST00000619654 | CEP104 | ENSG00000116198 | ENST00000378223 | -0.3761 | 429 | - | CHOL | | ENSG00000274383 | ENST00000619654 | EDEM1 | ENSG00000134109 | ENST00000445686 | -0.3145 | 268 | - | CHOL | | ENSG00000274383 | ENST00000619654 | RDX | ENSG00000137710 | ENST00000534683 | -0.1003 | 442 | - | CHOL,READ | | ENSG00000274383 | ENST00000619654 | RDX | ENSG00000137710 | ENST00000528556 | -0.1360 | 374 | - | CHOL,READ | | ENSG00000274383 | ENST00000619654 | RDX | ENSG00000137710 | ENST00000533678 | -0.1011 | 344 | - | CHOL,READ | | ENSG00000274383 | ENST00000619654 | SEC24B | ENSG00000138802 | ENST00000399100 | -0.1845 | 357 | - | CHOL | | ENSG00000274383 | ENST00000619654 | MMUT | ENSG00000146085 | ENST00000274813 | -0.1214 | 1 | - | CHOL,KIRC | | ENSG00000274383 | ENST00000619654 | SLC25A25 | ENSG00000148339 | ENST00000466983 | -0.1241 | 307 | - | CHOL,KIRC,BLCA,KIRP,UCEC | | ENSG00000274383 | ENST00000619654 | SMIM14 | ENSG00000163683 | ENST00000511809 | -0.1066 | 368 | - | CHOL,COAD,READ | | ENSG00000274383 | ENST00000619654 | SERINC5 | ENSG00000164300 | ENST00000509193 | -0.1408 | 388 | - | CHOL | | ENSG00000274383 | ENST00000619654 | UGP2 | ENSG00000169764 | ENST00000483108 | -0.1256 | 387 | - | CHOL,COAD,READ | | ENSG00000274383 | ENST00000619654 | UGP2 | ENSG00000169764 | ENST00000445915 | -0.1559 | 431 | - | CHOL,COAD,READ | | ENSG00000274383 | ENST00000619654 | UGP2 | ENSG00000169764 | ENST00000613823 | -0.1559 | 434 | - | CHOL,COAD,READ | | ENSG00000274383 | ENST00000619654 | BTD | ENSG00000169814 | ENST00000449107 | -0.1483 | 382 | - | CHOL,COAD,STAD | | ENSG00000274383 | ENST00000619654 | ANKRD28 | ENSG00000206560 | ENST00000451422 | -0.1174 | 263 | - | CHOL | | ENSG00000274383 | ENST00000619654 | NCOA4 | ENSG00000266412 | ENST00000579039 | -0.1109 | 93 | - | CHOL,COAD,READ | | ENSG00000274383 | ENST00000619654 | SMARCA2 | ENSG00000080503 | ENST00000382186 | -0.6737 | 196 | - | CHOL,KIRP,UCEC | | ENSG00000274383 | ENST00000619654 | BZW1 | ENSG00000082153 | ENST00000452790 | -0.1298 | 320 | - | CHOL | | ENSG00000274383 | ENST00000619654 | HACD3 | ENSG00000074696 | ENST00000569894 | -0.1068 | 358 | - | KIRC,KIRP | | ENSG00000274383 | ENST00000619654 | USP46 | ENSG00000109189 | ENST00000508499 | -0.1653 | 168 | - | KIRC,KIRP | | ENSG00000274383 | ENST00000619654 | USP46 | ENSG00000109189 | ENST00000512656 | -0.1811 | 186 | - | KIRC,KIRP | | ENSG00000274383 | ENST00000619654 | KIAA1191 | ENSG00000122203 | ENST00000510164 | -0.1032 | 211 | - | KIRP | | ENSG00000274383 | ENST00000619654 | KIAA1191 | ENSG00000122203 | ENST00000533553 | -0.2108 | 390 | - | KIRP | | ENSG00000274383 | ENST00000619654 | SEC23A | ENSG00000100934 | ENST00000557280 | -0.2003 | 92 | - | CHOL,BLCA,UCEC,PRAD | | ENSG00000274383 | ENST00000619654 | SEC23A | ENSG00000100934 | ENST00000553970 | -0.2003 | 92 | - | CHOL,BLCA,UCEC,PRAD | | ENSG00000274383 | ENST00000619654 | PNPO | ENSG00000108439 | ENST00000584061 | -0.1099 | 1 | - | CHOL | | ENSG00000274383 | ENST00000619654 | PNPO | ENSG00000108439 | ENST00000434554 | -0.1801 | 1 | - | CHOL | | ENSG00000274383 | ENST00000619654 | SLMAP | ENSG00000163681 | ENST00000495364 | -0.1878 | 267 | - | BLCA,UCEC,PRAD,COAD,STAD,READ | | ENSG00000274383 | ENST00000619654 | ACADM | ENSG00000117054 | ENST00000420607 | -0.1155 | 218 | - | CHOL,KIRC,KIRP,COAD,STAD,READ |
| lncRNA regulates mRNA by competing the miRNA binding site with mRNA. |
| LncRNA Ensembl ID | lncRNA-miRNA-mRNA | Cancer Types |
| ORFfinder result for the gencode.v22.lncRNA.transcript.fa. |
| lncRNA Ensembl ID | lncRNA ENST ID | length(AA) | start at transcript | end at transcript | | ENSG00000274383.1 | ENST00000619654.1 | 31 | 204 | 109 |
|
