 lncRNA targets the enhancer region and positively regulates the gene expression. |
| lncRNA targets the promoter region and positively regulates the gene expression. |
| lncRNA targets the promoter region and negatively regulates the gene expression. |
| lncRNA targets the 3'UTR region and negatively regulates the mRNA. |
| Only predicted by lncTar | | SPICE1,NEK4,CMTM4,PSMD2,SAV1,AP5M1,ANTXR1,MARCHF6,SENP7,RNF123,AIDA,BECN1,MAP4K3,RDX,TCF20,TNPO3,QSER1,PPP1R12A,GNL3L,TPM3,TMEM161B,KIAA1109,STAU2,TBC1D15,KAT6B,EDEM1,ITPR2,EIF4G1,RAB7A,FRG1BP,FCHO2,CLDND1,MAT2B,PBRM1,TRAK1,DIP2C,PSMC1,VPS13B,SRP72,RAD21,SACM1L,MAN1A2,GMPS,L2HGDH,MRPL19,ATP11B,PRRC2C,SUMF2,PRKAG1,SNX19,VPS35L,PDPK1,ACBD5,ARFIP1,PAK2,TRAK2,CPEB4,CDK4,ARID1B,TMEM127,STRN,CCDC32,SLFN5,EPS8,GOLIM4,RPRD1B,PHF20,LRP10,KIDINS220,CYLD,CDC27,PCCB,ABRAXAS1,GTF2H3,TMCO3,RNF31,JMJD1C,CLASP2,GANAB,SEC23A,MINK1,JKAMP,MKLN1,MFSD11,ATP5PB,TXNRD1,ITSN2,MTMR12,PSME3,RB1CC1,SMAD1,ERGIC1,CLSPN,WIPF2,TM9SF1,MFAP3L,MYCBP2,FAM102B,AGFG1,NBAS,TM7SF3,TP53BP2,YAP1,POC1B,ARL1,FOXN3,MAIP1,HOMER1,TRA2B,ATP5F1B,UVRAG,OSBPL8,FBH1,GNPDA2,CAMK2G,LDLR,GALNT7,MTRR,TMEM123,AZI2,SELENOT,DCP1A,ACTR2,DCAF7,VAMP7,RBM7,MYLIP,CNOT8,MRPL49,NSF,TUT7,SEC23B,NUP58,GOSR2,CNST,HBP1,PPFIBP1,EIF4G2,CD46,PLEKHA7,CDC23,PARP4,NAA50,CUL2,CAB39,HUWE1,PRKAR1A,SLC25A40,PLIN3,ERAP1,FARP1,ATL1,DCAF5,RABEP1,WDTC1,FAM13B,GTPBP8,UGDH,NOTCH2,ATF1,FNDC3B,ARHGAP32,PRELID3B,ADAT1,BCKDHB,TAF1A,RPRD1A,NOMO2,HMGCR,RAP1GDS1,LRP6,TMEM87B,FAM168B,FAM53C,TASP1,USP4,DLST,SINHCAF,ARHGEF3,VPS4B,ADCY7,SNX12,NEPRO,PMM2,POGLUT3,FRS2,KHNYN,TOM1L1,FAM104A,MICAL3,DNM2,FOXJ3,EDC4,UBXN7,LARP1,EHBP1,NPEPPS,GBA,GMPR2,UQCRC2,MPPE1,RCHY1,HECTD1,SCOC,TUT4,SLAIN2,PPP6R1,ATP6V0C,PKN2,NDEL1,ARIH1,PUM1,MAN2A2,OS9,SEC24B,RABL3,FAM91A1,HIGD1A,KMT2D,CTNNB1,PKD2,EXOC7,ANAPC1,MON2,CEP57,MAPK14,TP53BP1,WDR48,SSR3,PPIP5K2,COPS7A,IFNAR2,USP32,SNX30,G3BP1,LLGL1,MORF4L1,FERMT2,ANKIB1,PRKACB,STAT3,FBXL18,RUNDC1,PRMT5,TWF1,C9orf64,IPO5,ASXL2,ALAS1,TARS1,POLR2B,FRYL,UTRN,CYRIB,BAZ2A,CEP350,LZTFL1,LMBR1,SORL1,PIKFYVE,MYOF,HSPG2,EIF3C,SLC35A5,MAP3K3,RAB18,SLC10A7,DENND4A,GNPTAB,VPS50,MED13,RAP1B,GALK2,WDR7,TMEM131,USP46,SMG6,WDR1,ADNP2,WDR20,PKP2,NUP98,TAF6,MTFR1,TRIP12,GTF2A1,NPC1,TFIP11,GGCX,PRKAA1,PPP1R2,SOS1,SMAD5,FLNB,CSNK1A1,GOSR1,ATP1A1,PPP3CB,PHF20L1,CTNNA1,ELF1,OSBPL1A,RPE,VRK2,TAF2,GCC2,CAST,TEX2,PLAA,AKAP1,PIP5K1A,MED21,HEATR5A,PDCD10,FEM1B,AMBRA1,RUSF1,PEX10,TMBIM6,MPRIP,DOCK1,CTDSP2,MLH1,NCOR1,ZFYVE9,FNBP1L,EMC1,TAF5L,SCAF11,CNOT1,ARL6IP5,DIABLO,NF1,DSTYK,CAMSAP2,MBP,SLC35E1,TRAP1,RMDN3,ITSN1,MYH9,SLC11A2,USP15,FCF1,SERINC5,DNAJC16,SECISBP2L,UBR1,VPS41,SEPTIN10,PCDHGC3,ACTR3,NOP9,DHX40,CHD8,DAG1,TSR1,STAMBP,HPS3,SLC4A7,KAT5,KIAA0100,PRDM2,ARPP19,ARHGAP21,IARS1,UBE4A,DCUN1D1,FAT1,GDI2,CDV3,CCDC126,ERBIN,PHACTR2,NAPA,CAP1,ANKRD11,COBLL1,ZC3H11A,WASF2,FKTN,VGLL4,MACF1,DHX8,NBR1,LIMA1,SH3GLB1,CEP63,RIC1,NUMB,CUL4B,THTPA,KTN1,ATP2C1,C5orf24,ETFA,ILK,PTPN4,SEC24D,UBE2D3,RBM4,DYNC1I2,DOCK7,GLS,SEPTIN11,CLIP1,NSUN3,RFFL,LRRCC1,ARNT,RNF19B,FAM219B,PPIL4,RAD50,API5,IQGAP2,RAI1,ZFPL1,NCOA2,DCAF11,RC3H2,SPDL1,SNAP23,DYNC2H1,HIF1A,BCL2L2,GNA13,RNF169,AP2B1,CNIH1,PRKAR2A,TBC1D2B,RAB11FIP1,RAI14,ELL2,LARP4,USP9X,ROCK2,ZBED6,C1orf109,UEVLD,MTMR1,TGFBRAP1,MYO1E,WNK1,WIPI1,RBM41,CHURC1,SOCS7,TMLHE,KLHL5,TTF2,EPS15,SMCHD1,OSBPL9,LYSMD3,TIRAP,GOLGA2,NIPAL3,RPN2,CCNG1,NID2,PPARA,ANKRD26,GALC,PRKCZ,RABGAP1,KIF2A,PPP2R5C,OGDH,REST,EIF3L,PLS1,G2E3,HAUS4,SOS2,LARS2,CS,BACE1,PCYT1A,POLK,ACTN4,DCAF17,RTF1,IL6ST,DYRK1A,AFF1,BLOC1S6,CARM1,ABCE1,OSMR,HCCS,MRTFB,USP8,PICALM,FAM114A2,GCLC,SNX18,ITFG1,ECD,CPSF2,SPG11,FAM172A,ATP2B1,GLYR1,MAN2B2,RALGAPA1,IBTK,FER,TANK,CREB1,RAB6A,CMIP,TNS3,GSK3B,QKI,VPS26C,TAX1BP1,DENND4C,CEP170,OXSR1,RNF4,NT5C2,ZMYND11,RALGAPB,NME6,HIPK1,LIMS1,RNF40,QTRT2,PIK3CB,TACC1,CDKL5,EPB41,ANKRD46,SPIRE1,PSEN1,CEP104,TRIM37,GORASP1,PTPN11,MCM3AP,MID2,PLEKHB2,AMN1,DNAJC11,NR2C2,CLTC,ATRN,AP1AR,CREBRF,PARG,SDHC,ALG12,ATP2A2,AASDH,PIK3C3,ANKRD50,BIRC2,PTPRG,HSPA8,M6PR,SNX29,APAF1,NRP1,BBX,TAF1,PCNX1,ERLIN2,DDI2,DMXL2,EIF2A,CDC42SE2,HSPA4L,IQGAP1,RAB29,SMARCA2,SLMAP,PLEKHA5,CMTR2,SESTD1,CIPC,SNTB2,GSTCD,ASPH,STRAP,UFSP2,EML1,LYPLA1,FPGT,ARHGAP5,CLCC1,NKIRAS1,MPDZ,CSNK2A1,NBPF3,PPP1CB,IKBKG,KDM1B,UBN1,COPB2,SEC14L1,SF3B1,PRPS1,NIPA2,ARSB,MTMR9,ZFYVE1,PDLIM5,DYNC1LI2,KBTBD4,DDX24,MIDEAS,ZNF106,RASA1,APP,CHTF8,STT3A,NAMPT,CERT1,PTPN9,PTPRF,MBTPS1,SF3A1,ARMC8,PHC3,DDB1,SIK3,ABHD5,TAF1B,DOCK9,SYNJ1,PIGN,TBC1D23,ATP9B,ABCA1,TNPO1,PAIP2,SNX4,USP31,NEK7,FAM160B1,UTP18,RO60,MAPK9,CSNK1G3,CAPN1,HEATR5B,ACADM,SEC31A,DENND5B,TBC1D9B,CYFIP1,LSM12,TMEM184C,IPP,DENND5A,BDP1,BCOR,SYNRG,EVC,SLC30A7,CNDP2,CALCOCO2,USP10,TNFSF13,KIAA1191,DLG1,AFAP1,AHNAK,EHHADH,MCFD2,NDUFS1,SLC39A6 | | Exist in public source | | NA |
| lncRNA targets the skipped exon region. | | -lncRNA and exonskipping events are positively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | ORF mutation |
| -lncRNA and exonskipping events are negatively correlated. |
 |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | LOF | | ENSG00000273466 | ENST00000607946 | exon_skip_29583 | chr1:114780109-114780215 | -8.09 | -0.1011 | SIKE1 | ENST00000060969 | Frame-shift | | ENSG00000273466 | ENST00000607946 | exon_skip_319223 | chr19:43526200-43526349 | -19.59 | -0.1333 | ETHE1 | ENST00000292147 | Frame-shift | | ENSG00000273466 | ENST00000607946 | exon_skip_377198 | chr3:123130479-123130616 | -18.26 | -0.1416 | PDIA5 | ENST00000316218 | Frame-shift | | ENSG00000273466 | ENST00000607946 | exon_skip_11029 | chr1:154989559-154989707 | -16.52 | -0.1502 | FLAD1 | ENST00000292180 | Frame-shift | | ENSG00000273466 | ENST00000607946 | exon_skip_16568 | chr1:201989382-201989531 | -17.54 | -0.1193 | RNPEP | ENST00000295640 | Frame-shift | | ENSG00000273466 | ENST00000607946 | exon_skip_38175 | chr1:234398381-234398553 | -15.05 | -0.1052 | TARBP1 | ENST00000040877 | Frame-shift | | ENSG00000273466 | ENST00000607946 | exon_skip_41813 | chr10:68337857-68337996 | -18.45 | -0.1564 | HNRNPH3 | ENST00000265866 | Frame-shift | | ENSG00000273466 | ENST00000607946 | exon_skip_87733 | chr12:120571190-120571291 | -12.86 | -0.1383 | RNF10 | ENST00000325954 | Frame-shift | | ENSG00000273466 | ENST00000607946 | exon_skip_92074 | chr12:50142052-50142110 | -6.86 | -0.1633 | CERS5 | ENST00000317551 | Frame-shift | | ENSG00000273466 | ENST00000607946 | exon_skip_96024 | chr12:109090008-109090207 | -20.07 | -0.1454 | ALKBH2 | ENST00000343075,ENST00000429722 | Frame-shift | | ENSG00000273466 | ENST00000607946 | exon_skip_97655 | chr12:120579773-120579923 | -13.35 | -0.1019 | POP5 | ENST00000357500 | In-frame | | ENSG00000273466 | ENST00000607946 | exon_skip_152672 | chr17:42540949-42541206 | -29.16 | -0.1246 | NAGLU | ENST00000225927 | Frame-shift | | ENSG00000273466 | ENST00000607946 | exon_skip_296625 | chr18:42057882-42058051 | -18.26 | -0.1438 | PIK3C3 | ENST00000262039 | Frame-shift | | ENSG00000273466 | ENST00000607946 | exon_skip_353131 | chr20:58669290-58669453 | -25.16 | -0.1712 | STX16 | ENST00000371141 | Frame-shift | | ENSG00000273466 | ENST00000607946 | exon_skip_382458 | chr3:38131595-38131638 | -7.59 | -0.1997 | ACAA1 | ENST00000333167 | Frame-shift | | ENSG00000273466 | ENST00000607946 | exon_skip_430434 | chr4:82356536-82356683 | -12.60 | -0.1041 | HNRNPD | ENST00000313899 | In-frame | | ENSG00000273466 | ENST00000607946 | exon_skip_445390 | chr5:150403120-150403312 | -22.95 | -0.1247 | CD74 | ENST00000009530 | In-frame | | ENSG00000273466 | ENST00000607946 | exon_skip_470226 | chr7:103307595-103307708 | -14.09 | -0.1395 | PMPCB | ENST00000249269 | Frame-shift | | ENSG00000273466 | ENST00000607946 | exon_skip_476549 | chr7:76013741-76013887 | -17.62 | -0.1398 | STYXL1 | ENST00000248600,ENST00000359697,ENST00000431581 | Frame-shift | | ENSG00000273466 | ENST00000607946 | exon_skip_5818 | chr1:45568484-45568684 | -23.80 | -0.1315 | AKR1A1 | ENST00000351829,ENST00000372070 | Frame-shift | | ENSG00000273466 | ENST00000607946 | exon_skip_120741 | chr15:34228428-34228589 | -13.13 | -0.1050 | EMC4 | ENST00000267750 | Frame-shift | | ENSG00000273466 | ENST00000607946 | exon_skip_514339 | chrX:23713134-23713208 | -9.10 | -0.1264 | ACOT9 | ENST00000336430 | Frame-shift | | ENSG00000273466 | ENST00000607946 | exon_skip_78771 | chr11:134248808-134248959 | -12.87 | -0.1013 | THYN1 | ENST00000341541,ENST00000392594,ENST00000392595 | Frame-shift | | ENSG00000273466 | ENST00000607946 | exon_skip_52895 | chr10:98431130-98431291 | -20.33 | -0.1374 | HPS1 | ENST00000325103,ENST00000361490 | Frame-shift |
| lncRNA targets by miRNA. |
| LncRNA Ensembl ID | miRNA ID | LncRNA ENST ID | Binding site in lncRNA | Score | Energy | Align Len | Public source |
| RNA A-to-I editing events in lncRNA. |
| LncRNAediting ID | LncRNA Ensembl ID | Chromosome | Editing Position | Strand | Gene Type | Gene Name | Transcript ID | Transcript Type | Transcript Name |
| Edited-associated DElncRNAs in cancer. |
| LncRNA Ensembl ID | LncRNA Index | Cancer Type | Chr_Postion_Strand | AVE1 | AVE2 | log2FC | W-value | P-value | Adjc.p-value | Change |
| Correlation between RNA A-to-I editing events's frequecy and lncRNA expression. |
| LncRNA Ensembl ID | LncRNA Index | Correlation | P-value | Adjc.p-value |
| Cis-expression quantitative trait loci(cis-eQTL) of lncRNA. |
| LncRNA Ensembl ID | LncRNA Name | SNP info | Number of Positive corelated Cancer | Positive corelated Cancer | Number of Negative corelated Cancer | Negative corelated Cancer |
| lncRNA regulates differentially expressed genes by function as enhancer. |
| LncRNA Ensembl ID | PC Gene ID | PC Gene Name | Positive correlated cancers | Cancer with PC gene up-regulation | Cancer with PC gene down-regulation |
| LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region. |
| LncRNA Ensembl ID | LncRNA ENST ID | PC Gene Name | PC Gene ID | PC ENST ID | dG | nDG | Cancer with PC gene up-regulation | Cancer with PC gene Down-regulation | | ENSG00000273466 | ENST00000607946 | NAA50 | ENSG00000121579 | ENST00000493900 | -0.1146 | 321 | - | PCPG | | ENSG00000273466 | ENST00000607946 | KIAA1191 | ENSG00000122203 | ENST00000533553 | -0.1514 | 481 | - | KIRP | | ENSG00000273466 | ENST00000607946 | ITFG1 | ENSG00000129636 | ENST00000565262 | -0.2193 | 597 | - | GBM | | ENSG00000273466 | ENST00000607946 | SEC24B | ENSG00000138802 | ENST00000504968 | -0.1471 | 248 | - | CHOL | | ENSG00000273466 | ENST00000607946 | SEC24B | ENSG00000138802 | ENST00000399100 | -0.1660 | 6 | - | CHOL | | ENSG00000273466 | ENST00000607946 | VGLL4 | ENSG00000144560 | ENST00000451674 | -0.1042 | 376 | - | PCPG | | ENSG00000273466 | ENST00000607946 | VGLL4 | ENSG00000144560 | ENST00000424529 | -0.1756 | 193 | - | PCPG | | ENSG00000273466 | ENST00000607946 | VGLL4 | ENSG00000144560 | ENST00000426568 | -0.1756 | 199 | - | PCPG | | ENSG00000273466 | ENST00000607946 | VGLL4 | ENSG00000144560 | ENST00000430365 | -0.1756 | 199 | - | PCPG | | ENSG00000273466 | ENST00000607946 | RABL3 | ENSG00000144840 | ENST00000483733 | -0.1128 | 331 | - | PCPG | | ENSG00000273466 | ENST00000607946 | SEC24D | ENSG00000150961 | ENST00000506622 | -0.1128 | 482 | - | CHOL | | ENSG00000273466 | ENST00000607946 | GALK2 | ENSG00000156958 | ENST00000558399 | -0.1547 | 581 | - | PCPG | | ENSG00000273466 | ENST00000607946 | SLC30A7 | ENSG00000162695 | ENST00000357650 | -0.1203 | 586 | - | PCPG | | ENSG00000273466 | ENST00000607946 | RNF123 | ENSG00000164068 | ENST00000327697 | -0.1121 | 459 | - | GBM,CHOL | | ENSG00000273466 | ENST00000607946 | RNF123 | ENSG00000164068 | ENST00000432042 | -0.2054 | 439 | - | GBM,CHOL | | ENSG00000273466 | ENST00000607946 | RNF123 | ENSG00000164068 | ENST00000443204 | -0.1125 | 489 | - | GBM,CHOL | | ENSG00000273466 | ENST00000607946 | RNF123 | ENSG00000164068 | ENST00000433785 | -0.1121 | 460 | - | GBM,CHOL | | ENSG00000273466 | ENST00000607946 | SERINC5 | ENSG00000164300 | ENST00000509193 | -0.1466 | 328 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | LYSMD3 | ENSG00000176018 | ENST00000453259 | -0.1095 | 310 | - | CHOL | | ENSG00000273466 | ENST00000607946 | DNAJC11 | ENSG00000007923 | ENST00000451196 | -0.1067 | 490 | - | KIRP,PCPG | | ENSG00000273466 | ENST00000607946 | TBC1D23 | ENSG00000036054 | ENST00000475134 | -0.3320 | 396 | - | PCPG | | ENSG00000273466 | ENST00000607946 | PKN2 | ENSG00000065243 | ENST00000370513 | -0.5507 | 374 | - | PCPG | | ENSG00000273466 | ENST00000607946 | PKN2 | ENSG00000065243 | ENST00000449189 | -0.1261 | 1 | - | PCPG | | ENSG00000273466 | ENST00000607946 | IBTK | ENSG00000005700 | ENST00000503631 | -0.3862 | 37 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | IBTK | ENSG00000005700 | ENST00000510291 | -1.3767 | 715 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | WNK1 | ENSG00000060237 | ENST00000574564 | -0.4680 | 607 | - | KIRP | | ENSG00000273466 | ENST00000607946 | SMARCA2 | ENSG00000080503 | ENST00000382186 | -0.7833 | 623 | - | GBM,CHOL,KIRP | | ENSG00000273466 | ENST00000607946 | TUT7 | ENSG00000083223 | ENST00000375947 | -0.1344 | 206 | - | CHOL | | ENSG00000273466 | ENST00000607946 | EPS15 | ENSG00000085832 | ENST00000465467 | -0.1208 | 211 | - | GBM,PCPG | | ENSG00000273466 | ENST00000607946 | PTPN4 | ENSG00000088179 | ENST00000431283 | -0.2640 | 250 | - | GBM,KIRP | | ENSG00000273466 | ENST00000607946 | PTPN4 | ENSG00000088179 | ENST00000441089 | -0.2918 | 166 | - | GBM,KIRP | | ENSG00000273466 | ENST00000607946 | PCNX1 | ENSG00000100731 | ENST00000439984 | -0.1035 | 552 | - | GBM,PCPG | | ENSG00000273466 | ENST00000607946 | PCNX1 | ENSG00000100731 | ENST00000554691 | -0.1001 | 517 | - | GBM,PCPG | | ENSG00000273466 | ENST00000607946 | PCNX1 | ENSG00000100731 | ENST00000555780 | -0.1247 | 523 | - | GBM,PCPG | | ENSG00000273466 | ENST00000607946 | SEC23A | ENSG00000100934 | ENST00000557280 | -0.6690 | 111 | - | CHOL | | ENSG00000273466 | ENST00000607946 | SEC23A | ENSG00000100934 | ENST00000553970 | -0.6690 | 111 | - | CHOL | | ENSG00000273466 | ENST00000607946 | SEC14L1 | ENSG00000129657 | ENST00000590483 | -0.1181 | 619 | - | PCPG | | ENSG00000273466 | ENST00000607946 | SEC14L1 | ENSG00000129657 | ENST00000589202 | -0.6229 | 63 | - | PCPG | | ENSG00000273466 | ENST00000607946 | TNS3 | ENSG00000136205 | ENST00000442536 | -0.1871 | 313 | - | KIRP | | ENSG00000273466 | ENST00000607946 | TNS3 | ENSG00000136205 | ENST00000458317 | -0.1970 | 368 | - | KIRP | | ENSG00000273466 | ENST00000607946 | RDX | ENSG00000137710 | ENST00000534683 | -0.1404 | 518 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | NEK7 | ENSG00000151414 | ENST00000367383 | -0.2406 | 428 | - | PCPG | | ENSG00000273466 | ENST00000607946 | UTRN | ENSG00000152818 | ENST00000367526 | -0.5100 | 98 | - | KIRP | | ENSG00000273466 | ENST00000607946 | SLMAP | ENSG00000163681 | ENST00000495364 | -0.2135 | 545 | - | PCPG | | ENSG00000273466 | ENST00000607946 | ABCA1 | ENSG00000165029 | ENST00000423487 | -0.1150 | 506 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | GOLIM4 | ENSG00000173905 | ENST00000309027 | -0.2440 | 634 | - | CHOL | | ENSG00000273466 | ENST00000607946 | SNX18 | ENSG00000178996 | ENST00000326277 | -0.1352 | 624 | - | CHOL,KIRP | | ENSG00000273466 | ENST00000607946 | MCFD2 | ENSG00000180398 | ENST00000409218 | -0.1709 | 324 | - | PCPG | | ENSG00000273466 | ENST00000607946 | COBLL1 | ENSG00000082438 | ENST00000629362 | -0.1950 | 625 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | PLEKHB2 | ENSG00000115762 | ENST00000404460 | -0.1220 | 524 | - | GBM | | ENSG00000273466 | ENST00000607946 | CEP104 | ENSG00000116198 | ENST00000438539 | -0.1653 | 561 | - | CHOL | | ENSG00000273466 | ENST00000607946 | CEP104 | ENSG00000116198 | ENST00000378223 | -0.1884 | 167 | - | CHOL | | ENSG00000273466 | ENST00000607946 | EDEM1 | ENSG00000134109 | ENST00000445686 | -0.1876 | 87 | - | CHOL | | ENSG00000273466 | ENST00000607946 | HOMER1 | ENSG00000152413 | ENST00000282260 | -0.1555 | 416 | - | GBM,KIRP | | ENSG00000273466 | ENST00000607946 | HOMER1 | ENSG00000152413 | ENST00000535690 | -0.1555 | 416 | - | GBM,KIRP | | ENSG00000273466 | ENST00000607946 | FNDC3B | ENSG00000075420 | ENST00000416957 | -1.6050 | 175 | - | PCPG | | ENSG00000273466 | ENST00000607946 | L2HGDH | ENSG00000087299 | ENST00000261699 | -0.3164 | 137 | - | CHOL,KIRP | | ENSG00000273466 | ENST00000607946 | L2HGDH | ENSG00000087299 | ENST00000555423 | -0.5727 | 53 | - | CHOL,KIRP | | ENSG00000273466 | ENST00000607946 | HECTD1 | ENSG00000092148 | ENST00000554471 | -0.1018 | 541 | - | GBM,CHOL | | ENSG00000273466 | ENST00000607946 | SNAP23 | ENSG00000092531 | ENST00000568451 | -0.1257 | 1 | - | PCPG | | ENSG00000273466 | ENST00000607946 | SNAP23 | ENSG00000092531 | ENST00000568331 | -0.1566 | 419 | - | PCPG | | ENSG00000273466 | ENST00000607946 | SNAP23 | ENSG00000092531 | ENST00000563873 | -0.1122 | 260 | - | PCPG | | ENSG00000273466 | ENST00000607946 | ZFYVE9 | ENSG00000157077 | ENST00000357206 | -0.1076 | 65 | - | GBM,KIRP | | ENSG00000273466 | ENST00000607946 | PEX10 | ENSG00000157911 | ENST00000510434 | -0.1191 | 304 | - | PCPG | | ENSG00000273466 | ENST00000607946 | DDI2 | ENSG00000197312 | ENST00000483899 | -0.2429 | 1 | - | GBM,CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | LARS2 | ENSG00000011376 | ENST00000414984 | -0.3382 | 199 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | ALAS1 | ENSG00000023330 | ENST00000484952 | -0.1586 | 495 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | ALAS1 | ENSG00000023330 | ENST00000493402 | -0.8000 | 463 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | PKP2 | ENSG00000057294 | ENST00000613243 | -0.1099 | 538 | - | CHOL | | ENSG00000273466 | ENST00000607946 | FERMT2 | ENSG00000073712 | ENST00000399304 | -0.1602 | 355 | - | CHOL | | ENSG00000273466 | ENST00000607946 | BCKDHB | ENSG00000083123 | ENST00000369760 | -0.1937 | 13 | - | CHOL | | ENSG00000273466 | ENST00000607946 | CNIH1 | ENSG00000100528 | ENST00000556113 | -0.1163 | 221 | - | CHOL | | ENSG00000273466 | ENST00000607946 | DCAF11 | ENSG00000100897 | ENST00000558706 | -0.1132 | 507 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | DCAF11 | ENSG00000100897 | ENST00000559144 | -0.1057 | 499 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | NAMPT | ENSG00000105835 | ENST00000354289 | -0.9725 | 646 | - | CHOL | | ENSG00000273466 | ENST00000607946 | MPDZ | ENSG00000107186 | ENST00000536827 | -0.1125 | 373 | - | CHOL | | ENSG00000273466 | ENST00000607946 | MPDZ | ENSG00000107186 | ENST00000447879 | -0.1125 | 374 | - | CHOL | | ENSG00000273466 | ENST00000607946 | MPDZ | ENSG00000107186 | ENST00000546205 | -1.2575 | 566 | - | CHOL | | ENSG00000273466 | ENST00000607946 | ACBD5 | ENSG00000107897 | ENST00000375888 | -0.1676 | 371 | - | CHOL | | ENSG00000273466 | ENST00000607946 | HMGCR | ENSG00000113161 | ENST00000511986 | -0.1078 | 540 | - | GBM,CHOL,KIRP,PCPG | | ENSG00000273466 | ENST00000607946 | EHHADH | ENSG00000113790 | ENST00000440662 | -0.1090 | 1 | - | CHOL,KIRP | | ENSG00000273466 | ENST00000607946 | PCCB | ENSG00000114054 | ENST00000469217 | -0.1001 | 545 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | MRPL19 | ENSG00000115364 | ENST00000358788 | -0.1120 | 83 | - | CHOL | | ENSG00000273466 | ENST00000607946 | MRPL19 | ENSG00000115364 | ENST00000409374 | -0.1155 | 587 | - | CHOL | | ENSG00000273466 | ENST00000607946 | GGCX | ENSG00000115486 | ENST00000430215 | -0.1468 | 577 | - | CHOL | | ENSG00000273466 | ENST00000607946 | GGCX | ENSG00000115486 | ENST00000428479 | -0.1051 | 462 | - | CHOL | | ENSG00000273466 | ENST00000607946 | DNAJC16 | ENSG00000116138 | ENST00000472665 | -0.1205 | 606 | - | CHOL,KIRP | | ENSG00000273466 | ENST00000607946 | ACADM | ENSG00000117054 | ENST00000420607 | -0.2868 | 688 | - | CHOL,KIRP,PCPG | | ENSG00000273466 | ENST00000607946 | ACADM | ENSG00000117054 | ENST00000528016 | -0.1096 | 1 | - | CHOL,KIRP,PCPG | | ENSG00000273466 | ENST00000607946 | ELL2 | ENSG00000118985 | ENST00000508757 | -0.4412 | 348 | - | CHOL | | ENSG00000273466 | ENST00000607946 | ITPR2 | ENSG00000123104 | ENST00000242737 | -0.2278 | 72 | - | CHOL,KIRP | | ENSG00000273466 | ENST00000607946 | SORL1 | ENSG00000137642 | ENST00000525532 | -0.2859 | 589 | - | GBM,CHOL,KIRP | | ENSG00000273466 | ENST00000607946 | SORL1 | ENSG00000137642 | ENST00000532694 | -0.2859 | 582 | - | GBM,CHOL,KIRP | | ENSG00000273466 | ENST00000607946 | SORL1 | ENSG00000137642 | ENST00000534286 | -0.2859 | 595 | - | GBM,CHOL,KIRP | | ENSG00000273466 | ENST00000607946 | SORL1 | ENSG00000137642 | ENST00000527934 | -0.2859 | 589 | - | GBM,CHOL,KIRP | | ENSG00000273466 | ENST00000607946 | RMDN3 | ENSG00000137824 | ENST00000558232 | -0.2132 | 11 | - | CHOL | | ENSG00000273466 | ENST00000607946 | IQGAP2 | ENSG00000145703 | ENST00000396234 | -0.1252 | 532 | - | CHOL,KIRP,PCPG | | ENSG00000273466 | ENST00000607946 | IQGAP2 | ENSG00000145703 | ENST00000502745 | -0.1252 | 525 | - | CHOL,KIRP,PCPG | | ENSG00000273466 | ENST00000607946 | HIGD1A | ENSG00000181061 | ENST00000452906 | -0.7875 | 1 | - | CHOL | | ENSG00000273466 | ENST00000607946 | NKIRAS1 | ENSG00000197885 | ENST00000416026 | -0.6714 | 407 | - | GBM,CHOL | | ENSG00000273466 | ENST00000607946 | MFAP3L | ENSG00000198948 | ENST00000506110 | -0.2182 | 247 | - | GBM,CHOL,KIRP | | ENSG00000273466 | ENST00000607946 | ITSN1 | ENSG00000205726 | ENST00000399353 | -0.3793 | 573 | - | GBM,CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | ITSN1 | ENSG00000205726 | ENST00000399338 | -0.3570 | 389 | - | GBM,CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | NDUFS1 | ENSG00000023228 | ENST00000449699 | -0.1224 | 599 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | NDUFS1 | ENSG00000023228 | ENST00000432169 | -0.1224 | 599 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | PPP3CB | ENSG00000107758 | ENST00000430762 | -0.2900 | 507 | - | GBM | | ENSG00000273466 | ENST00000607946 | CUL2 | ENSG00000108094 | ENST00000421317 | -0.8540 | 612 | - | GBM | | ENSG00000273466 | ENST00000607946 | USP46 | ENSG00000109189 | ENST00000508499 | -0.4092 | 493 | - | GBM,KIRP | | ENSG00000273466 | ENST00000607946 | USP46 | ENSG00000109189 | ENST00000512656 | -0.2047 | 563 | - | GBM,KIRP | | ENSG00000273466 | ENST00000607946 | UGDH | ENSG00000109814 | ENST00000507089 | -0.1148 | 588 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | EIF4G1 | ENSG00000114867 | ENST00000382330 | -0.1888 | 565 | - | PCPG | | ENSG00000273466 | ENST00000607946 | EIF4G1 | ENSG00000114867 | ENST00000422614 | -0.1090 | 503 | - | PCPG | | ENSG00000273466 | ENST00000607946 | ACTR3 | ENSG00000115091 | ENST00000535589 | -0.1841 | 495 | - | PCPG | | ENSG00000273466 | ENST00000607946 | GLS | ENSG00000115419 | ENST00000409428 | -0.1034 | 115 | - | GBM,PCPG | | ENSG00000273466 | ENST00000607946 | RNF19B | ENSG00000116514 | ENST00000235150 | -0.1018 | 610 | - | PCPG | | ENSG00000273466 | ENST00000607946 | CD46 | ENSG00000117335 | ENST00000480003 | -0.1649 | 413 | - | PCPG | | ENSG00000273466 | ENST00000607946 | DLST | ENSG00000119689 | ENST00000556460 | -0.1159 | 375 | - | PCPG | | ENSG00000273466 | ENST00000607946 | DLST | ENSG00000119689 | ENST00000555492 | -0.1328 | 379 | - | PCPG | | ENSG00000273466 | ENST00000607946 | ACTN4 | ENSG00000130402 | ENST00000390009 | -0.8100 | 683 | - | PCPG | | ENSG00000273466 | ENST00000607946 | ACTN4 | ENSG00000130402 | ENST00000589528 | -0.1421 | 613 | - | PCPG | | ENSG00000273466 | ENST00000607946 | FLNB | ENSG00000136068 | ENST00000490882 | -0.5833 | 681 | - | PCPG | | ENSG00000273466 | ENST00000607946 | FLNB | ENSG00000136068 | ENST00000493452 | -0.5833 | 681 | - | PCPG | | ENSG00000273466 | ENST00000607946 | FLNB | ENSG00000136068 | ENST00000470231 | -0.1899 | 487 | - | PCPG | | ENSG00000273466 | ENST00000607946 | TEX2 | ENSG00000136478 | ENST00000583501 | -0.1465 | 574 | - | GBM,PCPG | | ENSG00000273466 | ENST00000607946 | OSMR | ENSG00000145623 | ENST00000513831 | -0.1224 | 683 | - | PCPG | | ENSG00000273466 | ENST00000607946 | TACC1 | ENSG00000147526 | ENST00000520340 | -0.1169 | 217 | - | GBM,KIRP | | ENSG00000273466 | ENST00000607946 | TACC1 | ENSG00000147526 | ENST00000518415 | -0.2457 | 378 | - | GBM,KIRP | | ENSG00000273466 | ENST00000607946 | TACC1 | ENSG00000147526 | ENST00000521866 | -0.1236 | 323 | - | GBM,KIRP | | ENSG00000273466 | ENST00000607946 | AMN1 | ENSG00000151743 | ENST00000536761 | -0.3641 | 668 | - | GBM | | ENSG00000273466 | ENST00000607946 | AMN1 | ENSG00000151743 | ENST00000542781 | -0.1530 | 600 | - | GBM | | ENSG00000273466 | ENST00000607946 | TNFSF13 | ENSG00000161955 | ENST00000625791 | -0.8400 | 391 | - | PCPG | | ENSG00000273466 | ENST00000607946 | ANKRD46 | ENSG00000186106 | ENST00000519316 | -1.2133 | 19 | - | GBM,CHOL,KIRP | | ENSG00000273466 | ENST00000607946 | TXNRD1 | ENSG00000198431 | ENST00000526950 | -0.2644 | 576 | - | PCPG | | ENSG00000273466 | ENST00000607946 | CIPC | ENSG00000198894 | ENST00000555437 | -0.1539 | 299 | - | GBM,KIRP | | ENSG00000273466 | ENST00000607946 | CIPC | ENSG00000198894 | ENST00000555611 | -0.1097 | 554 | - | GBM,KIRP | | ENSG00000273466 | ENST00000607946 | SSR3 | ENSG00000114850 | ENST00000463503 | -0.1954 | 590 | - | PCPG | | ENSG00000273466 | ENST00000607946 | SSR3 | ENSG00000114850 | ENST00000496050 | -0.5831 | 631 | - | PCPG | | ENSG00000273466 | ENST00000607946 | RAP1GDS1 | ENSG00000138698 | ENST00000510870 | -0.1769 | 319 | - | GBM | | ENSG00000273466 | ENST00000607946 | ETFA | ENSG00000140374 | ENST00000559602 | -0.1086 | 383 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | ETFA | ENSG00000140374 | ENST00000559973 | -0.1807 | 165 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | PRKACB | ENSG00000142875 | ENST00000370684 | -0.4580 | 111 | - | GBM | | ENSG00000273466 | ENST00000607946 | SCOC | ENSG00000153130 | ENST00000502535 | -0.3270 | 629 | - | GBM | | ENSG00000273466 | ENST00000607946 | TMBIM6 | ENSG00000139644 | ENST00000552635 | -0.1664 | 376 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | TMBIM6 | ENSG00000139644 | ENST00000552370 | -0.2134 | 364 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | TMEM123 | ENSG00000152558 | ENST00000532161 | -0.2134 | 566 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | TMEM123 | ENSG00000152558 | ENST00000528969 | -2.1250 | 402 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | CMTM4 | ENSG00000183723 | ENST00000561680 | -0.1495 | 80 | - | GBM,KIRP | | ENSG00000273466 | ENST00000607946 | FARP1 | ENSG00000152767 | ENST00000601009 | -0.1395 | 440 | - | GBM,PCPG | | ENSG00000273466 | ENST00000607946 | PCYT1A | ENSG00000161217 | ENST00000419333 | -0.1350 | 431 | - | PCPG | | ENSG00000273466 | ENST00000607946 | PCYT1A | ENSG00000161217 | ENST00000431016 | -0.1260 | 535 | - | PCPG | | ENSG00000273466 | ENST00000607946 | PCYT1A | ENSG00000161217 | ENST00000444822 | -0.1399 | 537 | - | PCPG | | ENSG00000273466 | ENST00000607946 | MAIP1 | ENSG00000162972 | ENST00000435773 | -0.2230 | 207 | - | CHOL,PCPG | | ENSG00000273466 | ENST00000607946 | ATP1A1 | ENSG00000163399 | ENST00000440951 | -0.2054 | 419 | - | KIRP | | ENSG00000273466 | ENST00000607946 | ANTXR1 | ENSG00000169604 | ENST00000482235 | -0.1329 | 345 | - | PCPG | | ENSG00000273466 | ENST00000607946 | PLIN3 | ENSG00000105355 | ENST00000585479 | -0.1325 | 516 | - | PCPG |
| lncRNA regulates mRNA by competing the miRNA binding site with mRNA. |
| LncRNA Ensembl ID | lncRNA-miRNA-mRNA | Cancer Types |
| ORFfinder result for the gencode.v22.lncRNA.transcript.fa. |
| lncRNA Ensembl ID | lncRNA ENST ID | length(AA) | start at transcript | end at transcript | | ENSG00000273466.1 | ENST00000607946.1 | 101 | 310 | 5 |
|
