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lncRNA: ENSG00000272777 |
Summary for RP11-571L19.8 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000272777 | Gene symbol | RP11-571L19.8 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for RP11-571L19.8 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000272777 | 4.913544e+01 | -1.104942e+00 | 3.586740e-01 | -3.080631e+00 | 2.065625e-03 | 6.559102e-03 | DOWN | CHOL |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for RP11-571L19.8 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000272777 | ENST00000609071 | RP11-571L19.8 | ENSG00000198040 | ZNF84 | 44.14 | 92.7108 | P51523 | TF | NA |
| ENSG00000272777 | ENST00000609071 | RP11-571L19.8 | ENSG00000256223 | ZNF10 | -0.8 | 90.8289 | P21506 | TF | NA |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000272777 | ENST00000609071 | RP11-571L19.8 | ENSG00000004534 | RBM6 | 82.81 | 92.2072 | P78332 | RBP | NA |
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