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lncRNA: ENSG00000272068 |
Summary for BCAN-AS1 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000272068 | Gene symbol | BCAN-AS1 |
| Gene name | BCAN antisense RNA 1 | |
| HGNC | 55233 | |
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | RP11-284F21.9|01q23.1|BCAN-AS1 | |
| UniProtAcc |
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Structure and expression level for BCAN-AS1 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000272068 | 5.050591e+02 | 5.799285e+00 | 6.794786e-01 | 8.534904e+00 | 1.400000e-17 | 4.990000e-16 | UP | CHOL |
| ENSG00000272068 | 2.362550e+02 | 3.678367e+00 | 1.062810e+00 | 3.460983e+00 | 5.382070e-04 | 4.819376e-03 | UP | CESC |
| ENSG00000272068 | 1.129134e+03 | 6.019796e+00 | 2.824773e-01 | 2.131073e+01 | 9.030000e-101 | 5.660000e-97 | UP | KIRP |
| ENSG00000272068 | 1.957579e+02 | 4.336437e+00 | 3.669168e-01 | 1.181858e+01 | 3.130000e-32 | 3.720000e-31 | UP | LUSC |
| ENSG00000272068 | 2.391096e+02 | 1.968410e+00 | 2.163025e-01 | 9.100268e+00 | 9.010000e-20 | 5.760000e-19 | UP | BRCA |
| ENSG00000272068 | 2.264285e+02 | 5.348825e+00 | 3.241314e-01 | 1.650203e+01 | 3.550000e-61 | 3.300000e-59 | UP | LUAD |
| ENSG00000272068 | 3.038583e+02 | 1.927139e+00 | 3.071237e-01 | 6.274799e+00 | 3.500000e-10 | 4.520000e-09 | UP | STAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000272068 | 5.961128e-01 | 1.555011e-05 | CHOL | 9.044815e-05 |
| ENSG00000272068 | 3.715792e-01 | 5.430488e-11 | KIRP | 8.092751e-10 |
| ENSG00000272068 | 3.407262e-01 | 2.143888e-17 | LUAD | 5.102453e-16 |
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lncRNA-Protein interaction for BCAN-AS1 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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