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lncRNA: ENSG00000271971

Summary for CTD-2006H14.2

Gene summary

Gene information	Ensembl ID	ENSG00000271971
	Gene symbol	CTD-2006H14.2
	Gene name
	HGNC
	Entrez ID
	Gene type	antisense
	Synonyms
	UniProtAcc

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Structure and expression level for CTD-2006H14.2

Differentially expressed gene analysis between cancer and normal samples.

Ensembl ID	Base mean	log2FC(AD/control)	lfcSE	Stat	P-value	Adjc.p-value	DEG direction	Cancer type
ENSG00000271971	1.291595e+02	1.251731e+00	3.053919e-01	4.098769e+00	4.150000e-05	1.975610e-04	UP	CHOL
ENSG00000271971	5.233030e+01	1.022353e+00	3.129666e-01	3.266652e+00	1.088272e-03	6.023632e-03	UP	READ

Correlation between lncRNAs and cancer stages.

LncRNA Ensembl ID	Correlation	P-value	Cancer Type	Adjc.p-value
ENSG00000271971	6.820813e-01	2.476637e-07	CHOL	8.363814e-06
ENSG00000271971	3.372707e-01	4.257999e-12	LIHC	2.168064e-11

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lncRNA-Protein interaction for CTD-2006H14.2

lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000271971	ENST00000607706	CTD-2006H14.2	ENSG00000149311	ATM	108.57	92.2111	Q13315	Epi	NA
ENSG00000271971	ENST00000607706	CTD-2006H14.2	ENSG00000146247	PHIP	101.65	90.1516	Q8WWQ0	Epi	NA
ENSG00000271971	ENST00000607706	CTD-2006H14.2	ENSG00000185658	BRWD1	86.81	94.1337	Q9NSI6	Epi	NA
ENSG00000271971	ENST00000607706	CTD-2006H14.2	ENSG00000104885	DOT1L	73.12	93.1646	Q8TEK3	TF,Epi	NA
ENSG00000271971	ENST00000607706	CTD-2006H14.2	ENSG00000005483	KMT2E	90.57	91.85	Q8IZD2	Epi	NA
ENSG00000271971	ENST00000607706	CTD-2006H14.2	ENSG00000164190	NIPBL	78.88	95.9001	Q6KC79	Epi	NA
ENSG00000271971	ENST00000607706	CTD-2006H14.2	ENSG00000115548	KDM3A	71.92	90.3223	Q9Y4C1	Epi	NA
ENSG00000271971	ENST00000607706	CTD-2006H14.2	ENSG00000005302	MSL3	12.54	91.0013	Q8N5Y2	Epi	NA

lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000271971	ENST00000607706	CTD-2006H14.2	ENSG00000181827	RFX7	84.01	90.1292	Q2KHR2	TF	NA
ENSG00000271971	ENST00000607706	CTD-2006H14.2	ENSG00000104885	DOT1L	73.12	93.2241	Q8TEK3	TF,Epi	NA

lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000271971	ENST00000607706	CTD-2006H14.2	ENSG00000213079	SCAF8	86.69	92.7357	Q9UPN6	RBP	NA
ENSG00000271971	ENST00000607706	CTD-2006H14.2	ENSG00000114127	XRN1	82.74	91.5984	Q8IZH2	RBP	NA

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lncRNA-DNA interaction for CTD-2006H14.2

lncRNA targets the enhancer region and positively regulates the gene expression.

Only predicted by TDF

RPAP2,ARHGEF1,VAMP1,MFSD8,ABHD17A,CIRBP,PCGF1,RNF166,MZF1,C1orf56,SHARPIN,MAPK8IP3,SRP19,TMUB1,VAMP4,PPP2R3B,FKRP,SLF2,RNF170,PIGG,METTL5,WDR5B,ST7L,DTYMK,MSANTD2,TRAPPC2L,FAM200A,CHKA,COMMD7,FAM133B,TERF2IP,RECQL4,TTC14,STX18,SRSF4,ECHDC2,SCML1,CBX3,COX19,MPLKIP,PSIP1,TMEM242,MORC2,ACAD10,ZBTB6,OFD1,FCHSD1,TMEM243,CFAP298,XPNPEP3,MIS12,ANO8,ZNHIT6,HERPUD2,SEC63,APBA3,MIIP,LPAR2,RPP38,C18orf21,C22orf39,COQ6,KCTD2,C12orf73,DONSON,FUZ,ORC2,SSBP2,TSC22D4,CDK11A,BTF3L4,DHX35,SUPT20H,DCUN1D2,GIGYF1,HMGN3,STX6,ZNF14,NOL3,SEC31B,ATG2B,CIR1,PDRG1,ARHGAP33,DMAC2L,HEXD,DDX42,CASP6,EIF4A1,CSNK2A2,LYSMD1,FAM204A,KRTCAP3,PGGT1B,SWT1,CDCA3,ABHD8,RWDD4,ZNF30,MRPL52,AMMECR1L,TMEM168,FANCL,OVGP1,TTC17,NMRAL1,PHKA2,C1orf159,DDX56,FAM98C,UBE2G2,IP6K2,PLEKHG2,MLLT6,RPL23,ZNF70,FASTKD1,INO80D,ICE2,AGK,TMED4,BIVM,CRLF3,C20orf96,HSCB,STK3,ARFGAP1,BICDL2,AP1G2,ZNF25,CCDC59,TRNT1,PIP5K1C,ARHGAP27,KIAA1143,DENND6A,RALGPS2,IFT74,MZT1,NPDC1,PKD1,RIMKLB,PIDD1,METAP1D,JTB,AP5Z1,BBS2,CEP83,LRIG2,P4HTM,PARP2,PCED1A,MAPK15,CHRNB1,IKBKB,BRF1,ANKRD49,PAXBP1,LEMD2,KCTD18,CRACR2B,ATG14,FOXP1,TRPT1,DNAJC18,MYNN,AK6,SERP2,LINS1,ROGDI,DDX11,PUS10,TOR1AIP2,ZNF862,PDS5B,IDUA,NLRP1,CNPY4,PDGFA,KIF3A,GGT7,TYW1,GSTA4,SCAND1,TLE3,PPCDC,KHDC4,PPP1R26,MIER2,FHOD1,ATP5IF1,ATAD2B,VPS72,NISCH,DUT,RASSF1,PBX2,MYPOP,ANGEL2,ATPSCKMT,ATXN7L2,POC5,RIT1,MSTO1,UIMC1,TJAP1,SMARCE1,TAF1D,MKS1,DZANK1,FOXRED1,TASP1,IFT88,EML3,SUGT1,AFTPH,DHFR2,EFCAB7,DMPK,RPS6KB1,GABBR1,TIMM9,TFAP4,N6AMT1,KANSL3,MED25,TP53I13,RAB40B,AGO2,PMF1-BGLAP,RBM26,TCFL5,CYBC1,CEBPZOS,COL9A2,MLH3,KANSL1L,ANKRD46,HEATR5B,GEMIN6,PHF1,PABIR2,ABHD11,HDAC10,FBXL20,CENPC,HSF4,OTUD6B,ATRAID,NOXA1,UCK1,RGL3,C2orf49,MICALL2,HSPBAP1,R3HDM2,POLR1C,PSMG4,ZGPAT,PBX4,TIA1,MOSMO,SFXN4,ZNF8,BRAT1,SLBP,GPAA1,ERCC3,PSMG3,SAYSD1,PLAG1,DTX3,GRIPAP1,ZMYND19,RNF215,NAT9,LUC7L,WDR6,TMEM25,BRD8,ERCC8,LRSAM1,BROX,CRTC2,AMY2B,CYTH2,C8orf76,MED24,RBM33,NOL8,WRAP73,DSTYK,MPHOSPH10,TATDN3,SLC25A27,SERGEF,ZNF2,ICA1,HSBP1,CHCHD7,KCTD6,SAMD10,MAP3K2,GPATCH2,MUTYH,LAMA5,MFSD10,NHLRC2,RUFY3,PMF1,LARP7,ZC3HC1,NIPSNAP3B,KMT2E,CWC22,LRRC75B,C2orf42,DCAF16,RALGDS,DLG4,CHORDC1,S100PBP,TRIM3,CFAP410,ZC3H3,DTWD1,TAF1C,IKZF4,PIP4K2B,RNASEH2B,UBL5,RHBDF1,RPS8,EPS8L2,THAP9,ACTR3B,SYNE4,MPV17,THAP6,GGPS1,HSF1,SENP7,MTRF1,MACC1,DGAT1,ARVCF,GOLGA3,PRAF2,FAM216A,STK19,PHIP,ANO9,WASHC1,KLC1,FUNDC1,GPS2,NOL12,LYRM1,CCDC93,MBD6,TM2D1,EIF3H,COMMD6,HP1BP3,SPATA33,ACP6,DNM1,TAPT1,CBR4,NKRF,LZTS2,EMC9,MACROD1,FKTN,ALG9,EIF3E,DUSP28,CLIP3,PUM2,BOLA1,AXIN1,ANP32A,MKRN1,VPS16,BCDIN3D,ZCCHC7,TTLL3,RXRB,RHBDD3,GDPGP1,MED10,MTMR11,P3H1,ARMC1,TFB1M,PIGU,C2CD2,LRP5L,KATNIP,SH3GLB2,RCBTB2,PDCD7,INTS4,SIRT7,STK38,KRCC1,B3GNTL1,ARL16,SLIRP,ZSWIM9,RB1CC1,PET100,DYNC2LI1,DYNC2I2,CNOT9,BCS1L,TANK,DMTF1,MKNK1,FAM193A,NSD3,LMBR1L,B3GAT3,PTPRS,HSDL1,NDUFA11,VMP1,CENATAC,SMUG1,WDR54,SAFB2,APTX,POLR2K,ZBED5,TRIP10,CREB1,CDK2AP2,SLC2A11,GATD1,SUDS3,SPG7,SIGIRR,DPY19L4,PPIP5K1,CLCN6,IGIP,TMEM208,PDE7A,CLK2,WDR70,MYEF2,RNF19A,RAPGEF6,POLG2,NFIA,PTAR1,PSENEN,IFT81,CPSF7,CTC1,ITGB3BP,GABPB1,NASP,RPAIN,VPS36,ACYP1,IFT172,CTU2,GAR1,RSRC2,PGAP3,PFDN6,NAPB,C3orf62,C17orf97,ALKBH2,C9orf72,ZBED8,CHD9,PARL,AGER,AGO3,DYNLT1,PRPF38A,C1orf52,POGLUT1,MRPL32,NXF1,UQCC1,C6orf62,PAN2,C2orf76,PFDN5,PKN2,CENPH,THEM4,CCAR2,METTL4,KLHL17,N4BP2L1,DNASE1,SDHAF2,HDAC8,TTC3,CCDC24,GOLGA2,TDRP,ATF7IP,HERC4,RSL24D1,IQCC,CASTOR3,FAAP100,RAB28,PYROXD2,MRPL55,EMG1,DPY19L3,MED7,SH2B1,LCORL,RANBP3,STK11,DGKA,CEP57,HOOK3,SPICE1,ARMCX4,TMEM18,EIF2B4,GLMN,METTL21A,THOC1,WDR59,NUMA1,ACBD6,ODR4,IFT140,TRAPPC4,TMEM138,LTO1,TRAF1,CCDC106,ALS2CL,NEK9,HMGB1,METTL23,ANKDD1A,EXD3,GLT8D1,DDX6,NFKBID,C17orf75,GSDMD,MAF1,NRBP2,SLX4,MECP2,CHMP2A,NBPF11,DYNLT2,ACIN1,PPP1R3F,PRMT7,INPP5E,PHF11,CHD2,MINDY3,NBPF15,CHRAC1,VPS4A,OTUD4,ODF3B,UPF3B,IFT20,HAUS1,CCDC127,FRS3,FBXL8,GNRH1,ZSWIM8,PSMG2,KRTCAP2,PISD,CCDC82,POP5,ZDHHC24,GDI1,MYL5,NOM1,ANP32E,UCKL1,FKBP3,SYNGAP1,DECR1,CHD1,LRP11,NAP1L4,PTCD1,HARS2,EP400P1,HPS4,ARHGEF25,USP45,CARD8,ZDHHC1,GOPC,LRRC14,CENPU,LRIF1,STMN1,PLCG1,ZBTB8OS,TMX3,UBE2B,BICRA,MDM1,CHTF18,ODAD4,ACADVL,NAT14,CCDC174,CDK5RAP1,SPIN3,MARCHF9,NPRL2,SUV39H2,KLHDC1,FBXO46,RNPC3,C14orf28,CCDC77,BTBD19,KIAA2026,ZDHHC8,SGSM3,CCNT2,DHRS12,ORC3,ZNF91,SAP18,RBM25,C1orf131,ENDOV,BLCAP,FANK1,UBR5,EFNA3,TRAM1L1,ETNK1,ERMARD,PRR36,E2F6,RNF114,EPC1,ZNF22,HIRA,ATXN3,HEXIM2,ARGLU1,YJEFN3,LIG4,SGSM2,VMAC,KRI1,RNF25,KRR1,SDCCAG8,DYRK4,FAM149B1,LBHD1,CENPS,DVL1,PPP4R3A,RFX3,TRIM46,TMEM68,MYL6B,TNIP2,USP48,ZCCHC10,ELF2,NDUFA5,TMEM65,ZNF43,COA5,COQ9,NR2C1,BRD9,BDH2,SOS1,SMIM19,FKBP2,ZDHHC21,WDR37,GGA3,GEMIN8,TRIM66,MRPS26,MSL2,UBE2I,TMEM267,ZCCHC8,COQ8B,ITFG2,RRNAD1,ZSWIM7,RP11-523H20.5,LRRC37A3,KIAA0895L,NDUFAF6,ZNF74,PHYKPL,SF3B1,POFUT2,TMEM9,FBXO10,PRKRA,ZFP69,PHKG2,NARF,PIGM,ASB6,POLR2J,CENPT,IMMP2L,POGZ,LSM4,ARRDC2,RBMX,RBM4B,MRPS31,C21orf58,ADAT2,WDSUB1,MAP3K12,ORC4,FUBP1,AAAS,SLC38A6,CAPN15,CNKSR1,SMPD4,HMGB2,DDX17,C8orf82,TMEM129,HAUS5,HDAC7,CTDSPL2,GNPDA2,FBXL12,SDR39U1,CDAN1,EID1,GPALPP1,C16orf87,PCYOX1L,ABCC5,NDUFC1,MTFR1L,CRYZL1,SUPT3H,STK36,ANKRD16,GOLGA8B,ALPK1,ZFX,SMG9,CBWD2,TIMM29,GOLGA8A,RABGAP1,PAM16,SETD4,TSNAX,SEPTIN7,CEP162,RBMS1,ZNF17,CRBN,ZNF84,CACNB3,C19orf18,PDCD6,ZDHHC6,PRPF40B,PCMTD1,JMJD1C,NAE1,JAG2,LZTR1,USP20,FUT11,KBTBD2,ATF2,MRFAP1L1,COPS7B,GSDMB,PEX2,HELQ,ERI2,TBC1D24,KRT10,TMEM234,BRD1,TRIQK,FAM24B,ACD,CXXC5,PHF10,WDCP,ZFP14,NPEPL1,TUBGCP6,CCDC14,FAAP20,STRADB,GNPAT,NDUFA3,RABGGTB,KLHL42,KNTC1,GKAP1,TAZ,C19orf44,SCYL3,CYB5D2,OGT,RCCD1,CCNB1IP1,RAB4B,DHX34,TUT4,CHKB,CEP89,ANAPC10,BBIP1,TRIM11,OSGEP,CLK1,MRRF,TMEM79,DHPS,WASHC3,CARS2,CCDC9B,ENO3,RFX7,PIH1D1,RDH14,LPCAT4,ZADH2,CCDC28A,GON4L,RBM22,ORMDL1,YTHDC1,COQ7,C17orf67,ATG4B,CCDC191,HIF1AN,NR2C2,BMF,FAM229A,CCS,COX6C,PPP4R2,ABCA7,TMCO6,STK25,GLS,TMEM126B,MBTD1,SEPSECS,COA6,DVL2,GAS8,CEP192,SCNN1D,TOR2A,CCDC12,BUD13,ERCC5,ZFP3,PEX11B,KBTBD6,OARD1,FAM172A,THADA,LENG8,PPP1R12C,PRR3,INPPL1,PPOX,SH3D21,WDR53,PPWD1,SASS6,CLASP1,MRPL20,NHLRC3,SH3YL1,CHCHD1,ADPRM,COG8,MNS1,CAPN10,MICA,TMEM175,ZZZ3,ZMYM5,REXO1,TAMM41,CSNK1D,GDPD3,DRC3,PCID2,TRIM13,FGFR1OP2,TBCA,CWC15,ZCCHC9,NFYC,GGNBP2,NAA10,FBXO44,CABLES2,ZBTB2,REV3L,IWS1,LMF1,NDC80,ENOSF1,MAU2,THOC6,DZIP3,UBOX5,COA1,MOGS,GALT,FNBP4,ZFYVE19,NEK8,NKAP,MED23,UNC50,CLEC2D,VPS28,SUMO2,ATP13A1,KIFC2,PSPN,TSNARE1,NIT1,MRPS9,BTBD7,RABEP2,PYURF,CLHC1,GPBP1,AP4M1,FAM120C,MFF,DRAM2,CDK19,ARID4A,RNF115,SYF2,SMAD4,ACP1,VCPIP1,WDR27,EME2,DCAF15,TFDP2,PNISR,GEN1,PLPP5,SFPQ,AMT,ACAP3,LRRC27,EMC10,SPAG7,ZNF10,MORN2,RNF149,NUDT1,TRMU,PSMA2,SEM1,CSPP1,STMP1,TIGD5,FAM214A,NLGN2,CEP250,ARID2,C1orf35,ZCWPW1,KLHDC4,CCNL2,TCAF1,AFMID,ANKRD10,TENT4A,OBI1,VPS9D1,CHTOP,TATDN1,LSM5,DDTL,KYAT1,COX18,OSBPL7,KAT2A,UBE2W,CHD6,ANKS6,BMPR1A,PLA2G6,CSNK1E,TMEM86B,PDCD2,FBXW7,ZFP30,DPY30,MRPL50,FAM50A,ITPA,POLI,PAQR6,PGAP2,SEMA6C,PRPF39,MRPL22,ZFAND1,TRIM45,SRRM2,BTN2A1,WHRN,GORAB,DEAF1,CEP44,ANKS3,GMCL1,C10orf88,ANKRA2,SOGA1,CELF1,CCDC121,CRYGS,ACTR1B,PMS1,RPS6,FAM160A2,ZNF83,HCN3,C5orf34,FAM234A,SZT2,SMARCD1,ABHD10,GIN1,CRAMP1,PROCA1,NUDCD2,URGCP,CCAR1,MAP2K7,PPAN,CENPJ,DPH7,POU6F1,NSMCE4A,POLR3F,PNPLA7,HINFP,XPA,PCBD2,APBB3,RUFY2,WBP1,TEPSIN,RAD17,TRIT1,ME3,AGAP6,BET1,ZNF16,ADAMTS10,RBM39,GPATCH8,PGS1,NME7,TMEM44,IQCB1,SNRPD2,INTS3,TRIM39,NEK3,ERH,CSAD,PAAF1,ABCA2,IKZF5,C2CD5,TMEM259,LRRC39,CACTIN,FRA10AC1,BCLAF1,OGA,PYCR2,NUP42,IFT27,PAN3,ZNHIT1,MED28,SARS2,NUMBL,ARHGAP4,COPS5,SWSAP1,ZC3H4,RAB13,C1orf216,TM2D3,CRLS1,CALCOCO1,SPPL3,MTG1,CUEDC1,FAM76B,YAF2,H2AZ2,ADNP,MBD1,MRNIP,ING4,MED15,RSBN1L,RAD52,REC8,CEP43,CEP290,PGGHG,IFT46,RAD21,FBXL6,WSB1,USP21,RBM10,NSD2,TRIM52,COA8,NCBP3,PCBP4,TTC13,BAHCC1,SPATA20,YOD1,EEF1D,RPS24,STRADA,TPRKB,PSMC3IP,GMEB2,NACA,SAP30BP,RNASEH2C,DOT1L,TUBD1,REX1BD,TBC1D31,DENND4B,FASTK,RPRD2,MAN2C1,DXO,WHAMM,CCDC57,TET2,RABL2B,TSPYL2,XRN1,EPOR,ARFIP2,BRD7,WDR89,ROM1,DPM2,STX7,QPCTL,N4BP2L2,DCLRE1C,FBXL4,L3HYPDH,UNKL,DPP7,GPCPD1,TRAPPC12,BCCIP,ACSS1,ULK3,PIGX,KMT2B,IRAK4,TP53INP1,KCTD13,NUP58,RSF1,CLK4,C6orf136,USP30,PPIH,SPRN,FAM104B,ARHGAP19,SIAH1,GTF2H5,NOD1,UQCC2,ILKAP,ARID4B,LYPLAL1,ENSA,METTL17,TMEM39B,CBY1,WDR83,USF1,RABL2A,H3-3A,LEF1,MOV10,RBBP4,SLC25A29,FOXJ3,BMI1,DERL2,CBX1,B3GALT6,NCOA6,TTC21B,CAMKMT,FANCF,ANKRD11,NPIPA5,UTP23,USP35,SETD5,ZFP62,BRAF,BAZ1A,NKAPD1,PIGZ,SPOUT1,SRSF2,FBXW4,TSEN54,LRRC37B,MRPL57,NT5C3A,LMNTD2,SLC25A16,PARP10,EBPL,FAM193B,PNKP,SLC25A28,COG7,CZIB,ZFC3H1,NFYB,SP3,ARHGEF7,VCPKMT,MRPS25,SVIP,POLM,PALB2,ZNF69,MAX,ENTPD2,MARCHF6,JMJD4,IST1,RTRAF,ATM,EMC2,GLI4,PDE9A,CDK13,NDUFB8,RELCH,RSBN1,RBM27,ATG12,PIBF1,AHI1,LAMTOR3,PGAP1,PFDN2,FAM111A,ACYP2,GCFC2,ANKMY1,ASF1A,GNPTG,NUTF2,PHF12,GPN2,INTS11,EZH2,SNRNP48,RC3H1,ZNF44,SMG1,TAF7,SOX8,MTURN,BCLAF3,IFT80,ZCCHC14,UBN2,PPP2R5B,SBK1,ABTB1,SMCHD1,C11orf98,TBCB,MTA3,SYCE1L,ZC3H8,METTL16,GNL2,RAB2B,PGBD1,LENG1,MEX3A,TMEM186,FNTA,TADA2A,TGDS,ATF4,TLE2,CETN3,USP40,ZSWIM1,TM7SF2,LTB4R,CD2BP2,TMEM218,ANKRD26,GSAP,C18orf32,C2orf68,MRE11,NOL4L,RBM6,TRMT13,ARHGEF19,SREK1IP1,ARHGAP12,ORAI3,VPS54,MKKS,RYK,TNFRSF14,EPM2AIP1,PSME3IP1,PPP1R14B,GPSM1,SMYD3,UBXN11,CROCC,CERS5,RSAD1,NUCKS1,FAM3A,SRSF7,ATAT1,IFFO1,CEP63,CTBP1,POMT1,ADPGK,AKAP8,CEP57L1,CDPF1,UBTF,DPY19L2,KATNBL1,TAF4,MTIF3,C7orf26,PIGC,TBP,GABPA,SLX4IP,EFNA4,GATAD1,TET3,DCAKD,CLK3,INCA1,UQCRB,LRCH3,UBXN7,MSL3,DHX57,C17orf58,MC1R,TYK2,C1orf174,COQ4,CHST14,SCRIB,PHLDB3,NREP,ACBD4,CTPS2,BRWD1,LRRC23,TMEM223,MROH6,ENTR1,DCP1B,TBCK,RHPN1,BBS10,SP4,PPIE,RBM43,SETD6,CLDN15,TMTC4,ZNF34,KIAA0753,TMEM41B,DCAF17,CETN2,MAP4K5,TMEM128,GON7,CBX4,CCNL1,ANKRD54,SUMO1,RASSF7,POMT2,MEAF6,SCMH1,TMEM60,RBM45,YAE1,NSMCE2,NFIB,EGFL8,NR2C2AP,RNFT1,SPOP,MED4,PEX14,RETREG3,TMUB2,RMDN1,KANSL1,ARFRP1,ZMYM3,DNMT3A,ABCD4,PCGF2,AAMDC,MEN1,DGKQ,FAM161A,POLE,VPS33B,KPTN,LIPT1,PDE6D,PNN,DSN1,IRF2BP2,MICOS10,MROH1,BBS4,KATNA1,CBX8,SNX13,TRA2A,SMARCD3,KMT2A,DUS1L,REV1,NEURL4,NRIP2,CNTROB,NADSYN1,IMMP1L,CFAP44,TPRA1,GABPB2,CFDP1,ODF2L,SLC26A6,PCSK1N,IRF3,NRF1,ZXDC,CCDC92,GADD45GIP1,NSRP1,PIGL,ZC3H7A,AGAP3,ARV1,DDX39A,DCAF8,STAG3L5P-PVRIG2P-PILRB,HJURP,LIN37,MAP3K4,PPP1R16A,SS18L2,SUPT7L,MED31,EXTL2,RICTOR,SNX16,OSGEPL1,PACS2,RBM4,SHC2,VAMP2,ANAPC7,UBE2Q1,DNAJB2,EXOG,ANAPC2,BEND5,NCOA5,GABRE,SCAI,MYO19,SAMD1,PRIMPOL,RAB22A,EZH1,ELMOD3,GSTM2,SLC7A6,DCAF13,AGPAT4,THYN1,LIAS,NINL,EIF2AK1,TELO2,GTF2A2,MAP4K3,LRRC29,AUP1,C12orf76,FAM228B,CBLN3,HEXIM1,TIGD1,ELK4,RPL36A,THAP3,PCP2,CLASRP,DFFB,DEDD,CWC25,TTC32,ZMAT1,ZNF18,EIF2D,TMA7,CYP2R1,PPHLN1,YBEY,SPIRE2,CNOT2,RBM48,TYSND1,AARSD1,RBM5,NKTR,TMEM11,SLC35B3,PARP6,WDR33,NMRK1,NDUFV3,PIAS2,CRIPT,MRPS14,ASXL1,TSC1,CYHR1,SIRT6,HSPB11,USPL1,LIG1,NELFA,PRPF4B,TRAPPC2,SNRPB2

Exist in public source

lncRNA targets the promoter region and positively regulates the gene expression.

Only predicted by TDF

NPDC1,SGSM3,DPH7,C22orf39,ARHGAP19,YDJC,MSTO1,ABHD11,KIZ,VPS72,OSGEPL1,HAUS1,ZMAT1,CNPY4,WDR60,DHPS,PGS1,DMPK,ORC2,DGCR8,REST,PAAF1,PISD,CCDC18,ANKRD46,PRKRA,CBFB,GORAB,CHRAC1,EIF2D,FAM173B,ACP6,C16orf87,GTF2A2,OXLD1,TJAP1,FAM110A,CTC1,PDDC1,KBTBD6,LPAR2,EPC1,STX16,RNF219,TRMU,EP400NL,PGAP1,TMEM9,MRPS31,REC8,BRD7,IFT140,NCBP3,C19orf44,CTPS2,PARP2,DYRK4,PDCD6,C9orf114,ZNF14,C2orf81,RGL3,SETD6,UBXN7,MYNN,LRRC27,LBHD1,PIH1D1,FBXL20,TLE2,ATG4C,ITPA,C5orf34,GPAA1,AGO4,FAM133B,ACTR3B,PIK3C3,CEP89,ENOSF1,ATP13A1,SHFM1,ZC3H6,VPS28,SRP14,VPS33B,MAPK8IP3,ZC3H11A,MIIP,C14orf79,YOD1,SIN3B,VMAC,MZF1,DCP1B,RAD9A,C6orf203,C3orf62,ANKRD54,FAM160B2,UBALD2,FAM122B,QTRT1,C17orf75,MYL5,IFT74,PAPLN,FBXO46,KIAA0907,TMEM44,STRADA,HSCB,MANBAL,MAU2,SETD4,CRTC1,CLASP1,ANKRD26,PPCDC,NT5M,NFX1,ACCS,SPICE1,C2orf68,MAVS,GRIPAP1,NT5C,KPTN,ELAC1,PBX4,GGA1,WSB1,FAM234A,MRPL42,MAGEF1,ANGEL2,THOC6,SCNM1,MOB1B,NELFCD,ABCD4,CDK13,CYTH2,MFSD8,UBR5,RUFY2,NR2C2AP,PTCD1,CCNL1,WDR13,HCFC1R1,S100PBP,NUPL2,HIRA,AARSD1,ARIH2OS,ERCC3,PCBD2,C20orf96,TRIM11,NFIA,MED28,ODF2,AP4B1,NMRAL1,MDM4,CIRBP

Exist in public source

lncRNA targets the promoter region and negatively regulates the gene expression.

Only predicted by TDF

CTSD,SF3A1,APEH,CSNK1A1

Exist in public source

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lncRNA-RNA interaction for CTD-2006H14.2

lncRNA targets the 3'UTR region and negatively regulates the mRNA.

Only predicted by lncTar

CNOT1,SLC16A3,RNH1,MRPL37,PRKAR2A,MGAT1,THTPA,RAB5C,EIF3L,PSMD2,PSMD8,ATP6V0D1,FAH,MYH9,ETHE1,AP1B1,FTH1,UQCRC1,ATG7,MON1A,RHOG,LRP10,ATP5F1B,MID2,CLPB,SF3A1,EIF4G1,TUBA1C,TNFSF13,ABHD5,CDV3,LMAN2,NOMO2,ALAS1,ILRUN

Exist in public source

lncRNA targets the skipped exon region.

-lncRNA and exonskipping events are positively correlated.

lncRNA and exonskipping events positive correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	ORF mutation
ENSG00000271971	ENST00000607706	exon_skip_470077	chr7:102397619-102397698	-8.03	-0.1361	PRKRIP1	ENST00000397912,ENST00000496391	Frame-shift

-lncRNA and exonskipping events are negatively correlated.

lncRNA and exonskipping events negative correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	LOF
ENSG00000271971	ENST00000607706	exon_skip_52671	chr10:97461495-97461622	-12.17	-0.2063	MMS19	ENST00000370782,ENST00000438925	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_62623	chr11:69079833-69079883	-8.51	-0.2659	TPCN2	ENST00000294309	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_111863	chr14:23565815-23565892	-7.91	-0.1297	AP1G2	ENST00000308724,ENST00000397120	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_319223	chr19:43526200-43526349	-12.85	-0.1918	ETHE1	ENST00000292147	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_382458	chr3:38131595-38131638	-6.49	-2.1633	ACAA1	ENST00000333167	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_41813	chr10:68337857-68337996	-14.12	-0.1456	HNRNPH3	ENST00000265866	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_66185	chr11:124626472-124626609	-14.81	-0.1371	TBRG1	ENST00000441174	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_309204	chr19:49181348-49181461	-9.15	-0.1605	TRPM4	ENST00000252826	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_353131	chr20:58669290-58669453	-13.26	-0.1598	STX16	ENST00000371141	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_370518	chr22:50247691-50247776	-9.55	-0.1469	HDAC10	ENST00000216271	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_374497	chr3:49999439-49999513	-7.42	-0.1159	RBM6	ENST00000266022	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_384420	chr3:49812647-49812738	-9.68	-0.1424	UBA7	ENST00000333486	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_446758	chr5:178212972-178213103	-11.23	-0.1090	PHYKPL	ENST00000308158	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_446770	chr5:178215275-178215430	-12.30	-0.1160	PHYKPL	ENST00000308158	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_7523	chr1:78660553-78660654	-10.02	-0.1318	IFI44	ENST00000370747	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_9446	chr1:147270931-147271005	-9.53	-0.1444	CHD1L	ENST00000369258	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_23423	chr1:26294204-26294331	-11.25	-0.1907	UBXN11	ENST00000374221,ENST00000374222	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_52701	chr10:97468965-97469104	-13.66	-0.1535	MMS19	ENST00000370782,ENST00000438925	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_53559	chr10:101793912-101793998	-8.29	-0.1091	OGA	ENST00000361464	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_74009	chr11:64773429-64773505	-8.94	-0.2235	SF1	ENST00000377390	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_87733	chr12:120571190-120571291	-9.68	-0.1041	RNF10	ENST00000325954	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_92074	chr12:50142052-50142110	-4.73	-0.1154	CERS5	ENST00000317551	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_111870	chr14:23566561-23566686	-11.43	-0.1039	AP1G2	ENST00000397120	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_114365	chr14:74290026-74290118	-11.36	-0.1959	ABCD4	ENST00000356924	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_133217	chr16:8635038-8635079	-6.69	-0.2478	METTL22	ENST00000381920	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_290158	chr17:42953723-42953778	-7.73	-0.1610	AARSD1	ENST00000427569	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_300663	chr19:1425877-1425960	-6.37	-0.3033	DAZAP1	ENST00000233078	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_302168	chr19:10680345-10680443	-9.72	-0.1593	ILF3	ENST00000590261	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_326885	chr2:74490024-74490127	-10.01	-0.1787	TTC31	ENST00000233623	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_327433	chr2:86125794-86125880	-7.25	-0.1082	PTCD3	ENST00000254630	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_361485	chr21:29008239-29008307	-6.99	-0.1664	RWDD2B	ENST00000493196	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_364260	chr22:29291561-29291599	-5.98	-0.1759	EWSR1	ENST00000397938	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_431827	chr4:109696409-109696486	-4.29	-0.1950	CASP6	ENST00000265164	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_433210	chr4:177436275-177436351	-5.70	-0.1425	AGA	ENST00000264595	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_436035	chr5:79656957-79657001	-4.94	-0.2245	TENT2	ENST00000296783,ENST00000428308,ENST00000453514	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_444499	chr5:138164086-138164133	-4.51	-0.1367	BRD8	ENST00000254900	Frame-shift
ENSG00000271971	ENST00000607706	exon_skip_462144	chr6:125298713-125298816	-7.35	-0.1267	HDDC2	ENST00000398153	Frame-shift

lncRNA targets by miRNA.

LncRNA Ensembl ID	miRNA ID	LncRNA ENST ID	Binding site in lncRNA	Score	Energy	Align Len	Public source
ENSG00000271971	hsa-mir-22	ENST00000607706	chr8:93715556-93715632	159.00	-69.89	82	NA
ENSG00000271971	hsa-mir-22	ENST00000607706	chr8:93715894-93715979	151.00	-66.39	80	NA
ENSG00000271971	hsa-mir-22	ENST00000607706	chr8:93715813-93715899	146.00	-70.99	85	NA
ENSG00000271971	hsa-mir-22	ENST00000607706	chr8:93715398-93715488	143.00	-72.44	90	NA
ENSG00000271971	hsa-mir-378a	ENST00000607706	chr8:93715506-93715573	144.00	-55.86	65	NA
ENSG00000271971	hsa-mir-1247	ENST00000607706	chr8:93715541-93715670	150.00	-103.58	124	NA

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Variants for CTD-2006H14.2

RNA A-to-I editing events in lncRNA.

LncRNAediting ID

LncRNA Ensembl ID

Chromosome

Editing Position

Strand

Gene Type

Gene Name

Transcript ID

Transcript Type

Transcript Name

Edited-associated DElncRNAs in cancer.

LncRNA Ensembl ID

LncRNA Index

Cancer Type

Chr_Postion_Strand

AVE1

AVE2

log2FC

W-value

P-value

Adjc.p-value

Change

Correlation between RNA A-to-I editing events's frequecy and lncRNA expression.

LncRNA Ensembl ID

LncRNA Index

Correlation

P-value

Adjc.p-value

Cis-expression quantitative trait loci(cis-eQTL) of lncRNA.

LncRNA Ensembl ID

LncRNA Name

SNP info

Number of Positive corelated Cancer

Positive corelated Cancer

Number of Negative corelated Cancer

Negative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncRNA regulates differentially expressed genes by function as enhancer.

LncRNA Ensembl ID	PC Gene ID	PC Gene Name	Positive correlated cancers	Cancer with PC gene up-regulation	Cancer with PC gene down-regulation
ENSG00000271971	ENSG00000004777	ARHGAP33	ACC,CHOL,ESCA,GBM,HNSC,KIRC,KIRP,LIHC,PAAD,READ,SKCM,THCA,THYM,UCS	CHOL,READ
ENSG00000271971	ENSG00000006025	OSBPL7	ACC,BLCA,CHOL,DLBC,GBM,KIRC,KIRP,LGG,SARC,TGCT,THCA	CHOL
ENSG00000271971	ENSG00000007392	LUC7L	ACC,BLCA,BRCA,CESC,CHOL,COAD,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,OV,PAAD,READ,SARC,SKCM,STAD,TGCT,THCA,THYM,UCEC,UCS,UVM	READ
ENSG00000271971	ENSG00000007545	CRAMP1	ACC,BLCA,CHOL,COAD,DLBC,GBM,HNSC,KICH,KIRC,KIRP,LGG,PAAD,READ,SARC,SKCM,UCEC,UVM	CHOL
ENSG00000271971	ENSG00000090971	NAT14	ACC,CESC,CHOL,HNSC,KICH,KIRP,LGG,LIHC,PAAD,SARC,THCA,UCS	CHOL
ENSG00000271971	ENSG00000095397	WHRN	ACC,CHOL,DLBC,ESCA,HNSC,KICH,KIRP,PAAD	CHOL
ENSG00000271971	ENSG00000100429	HDAC10	ACC,BLCA,CHOL,DLBC,GBM,HNSC,KIRC,KIRP,LGG,LIHC,PAAD,READ,SARC,SKCM,TGCT,THCA	READ
ENSG00000271971	ENSG00000104218	CSPP1	ACC,CHOL,COAD,ESCA,GBM,KIRC,LAML,LIHC,READ,SKCM,STAD,UCEC,UVM	CHOL
ENSG00000271971	ENSG00000105556	MIER2	ACC,CHOL,HNSC,KICH,KIRP,LGG,LIHC,PAAD,THCA	CHOL
ENSG00000271971	ENSG00000105771	SMG9	ACC,CHOL,GBM,HNSC,KIRC,KIRP,LGG,LIHC,THCA	CHOL
ENSG00000271971	ENSG00000107816	LZTS2	ACC,BLCA,CHOL,DLBC,HNSC,KICH,KIRC,KIRP,LGG,LIHC,TGCT,THCA,UCS	CHOL
ENSG00000271971	ENSG00000119640	ACYP1	ACC,CHOL,COAD,ESCA,GBM,HNSC,KIRC,KIRP,LAML,LGG,LIHC,PAAD,READ,STAD,TGCT,THCA,THYM,UVM	CHOL
ENSG00000271971	ENSG00000127415	IDUA	ACC,BLCA,BRCA,CHOL,DLBC,GBM,KICH,KIRC,KIRP,LGG,LIHC,PAAD,SKCM,TGCT,THCA	CHOL
ENSG00000271971	ENSG00000127586	CHTF18	ACC,BLCA,CHOL,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,SARC,THCA,THYM,UCS	CHOL
ENSG00000271971	ENSG00000132952	USPL1	ACC,CHOL,COAD,ESCA,GBM,HNSC,KIRC,KIRP,LAML,PAAD,READ,SKCM,TGCT,UCEC,UVM	READ
ENSG00000271971	ENSG00000138834	MAPK8IP3	ACC,BLCA,CHOL,DLBC,ESCA,HNSC,KICH,KIRC,KIRP,LIHC,OV,PAAD,SKCM,TGCT,THCA,THYM,UVM	CHOL
ENSG00000271971	ENSG00000141570	CBX8	ACC,CHOL,DLBC,GBM,HNSC,KIRC,KIRP,LGG,LIHC,PAAD,READ,SARC	CHOL,READ
ENSG00000271971	ENSG00000143590	EFNA3	ACC,CHOL,KIRP,READ,SARC,TGCT,THCA	CHOL,READ
ENSG00000271971	ENSG00000146830	GIGYF1	ACC,BLCA,CESC,CHOL,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,OV,PAAD,READ,SARC,SKCM,THCA,UCEC,UCS,UVM	READ
ENSG00000271971	ENSG00000159714	ZDHHC1	ACC,CHOL,KIRP,LIHC,THCA	CHOL
ENSG00000271971	ENSG00000163482	STK36	ACC,BLCA,CESC,CHOL,COAD,ESCA,GBM,HNSC,KIRC,KIRP,LAML,LGG,LIHC,OV,PAAD,READ,SARC,SKCM,STAD,THCA,UCEC,UCS,UVM	CHOL,READ
ENSG00000271971	ENSG00000166532	RIMKLB	ACC,CHOL,GBM,KIRC,KIRP,LGG,THCA,UCS,UVM	CHOL
ENSG00000271971	ENSG00000167615	LENG8	ACC,BLCA,CHOL,DLBC,ESCA,GBM,HNSC,KIRC,KIRP,LGG,LIHC,OV,PAAD,SARC,SKCM,STAD,THCA,UVM	CHOL
ENSG00000271971	ENSG00000167702	KIFC2	ACC,BLCA,BRCA,CHOL,HNSC,KICH,KIRC,KIRP,LIHC,PAAD,SKCM,TGCT,THCA,UVM	CHOL
ENSG00000271971	ENSG00000168096	ANKS3	ACC,BLCA,BRCA,CESC,CHOL,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,OV,PAAD,SARC,SKCM,STAD,TGCT,THCA,UCS,UVM	CHOL
ENSG00000271971	ENSG00000169992	NLGN2	ACC,CHOL,GBM,KIRP,TGCT	CHOL
ENSG00000271971	ENSG00000171045	TSNARE1	ACC,BLCA,CESC,CHOL,ESCA,GBM,HNSC,KIRC,KIRP,LGG,LIHC,PAAD,READ,SARC,SKCM,TGCT,THCA,UVM	READ
ENSG00000271971	ENSG00000184162	NR2C2AP	ACC,CHOL,HNSC,KICH,KIRP,LIHC,THCA	CHOL
ENSG00000271971	ENSG00000184465	WDR27	ACC,BLCA,BRCA,CHOL,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LAML,LGG,OV,PAAD,READ,SARC,STAD,TGCT,THCA,UCEC,UCS	READ
ENSG00000271971	ENSG00000184786	DYNLT2	ACC,BLCA,CHOL,COAD,DLBC,GBM,LAML,LGG,READ,SARC,TGCT,THCA,THYM,UCEC	READ
ENSG00000271971	ENSG00000185917	SETD4	ACC,BLCA,BRCA,CHOL,COAD,ESCA,GBM,HNSC,KIRC,KIRP,LAML,LGG,LIHC,PAAD,SARC,SKCM,STAD,THCA,UCEC,UVM	CHOL
ENSG00000271971	ENSG00000197283	SYNGAP1	ACC,CHOL,ESCA,KIRC,KIRP,OV,PAAD,TGCT	CHOL
ENSG00000271971	ENSG00000197774	EME2	ACC,BLCA,BRCA,CHOL,DLBC,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,PAAD,SKCM,THCA,UVM	CHOL
ENSG00000271971	ENSG00000198920	KIAA0753	ACC,CHOL,COAD,GBM,KIRC,KIRP,LAML,PAAD,UVM	CHOL
ENSG00000271971	ENSG00000204149	AGAP6	ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KIRC,KIRP,LAML,LGG,LIHC,OV,PAAD,READ,SARC,SKCM,STAD,THCA,THYM,UCEC,UCS,UVM	READ
ENSG00000271971	ENSG00000204305	AGER	ACC,BLCA,BRCA,CESC,CHOL,DLBC,GBM,HNSC,KIRC,KIRP,LGG,LIHC,OV,PAAD,READ,SARC,STAD,TGCT,THYM,UCEC,UCS,UVM	CHOL
ENSG00000271971	ENSG00000213918	DNASE1	ACC,BLCA,BRCA,CESC,CHOL,ESCA,GBM,LAML,LGG,OV,READ,SARC,SKCM,THCA,THYM,UCS	CHOL,READ
ENSG00000271971	ENSG00000214021	TTLL3	ACC,BLCA,CHOL,COAD,ESCA,GBM,KIRC,KIRP,LGG,OV,PAAD,SARC,SKCM,STAD,TGCT,THCA,UCEC	CHOL
ENSG00000271971	ENSG00000215440	NPEPL1	ACC,BLCA,CHOL,DLBC,GBM,HNSC,KIRC,KIRP,LGG,LIHC,PAAD,SARC,SKCM,TGCT,THCA,UCS,UVM	CHOL
ENSG00000271971	ENSG00000221978	CCNL2	ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,OV,PAAD,READ,SARC,SKCM,STAD,TGCT,THCA,THYM,UCEC,UCS,UVM	READ
ENSG00000271971	ENSG00000003147	ICA1	BLCA,CHOL,COAD,DLBC,KIRP,LIHC,READ,SARC,STAD,UCS,UVM	CHOL,READ
ENSG00000271971	ENSG00000046647	GEMIN8	BLCA,CHOL,HNSC,KIRP,LAML,LIHC,PAAD,THCA,THYM	CHOL
ENSG00000271971	ENSG00000046651	OFD1	BLCA,CESC,CHOL,COAD,ESCA,GBM,HNSC,KIRC,KIRP,LAML,LGG,LIHC,PAAD,READ,SKCM,STAD,THCA,THYM,UCEC,UVM	CHOL
ENSG00000271971	ENSG00000064547	LPAR2	BLCA,CHOL,GBM,HNSC,KIRP,LGG,LIHC,SARC,THCA	CHOL
ENSG00000271971	ENSG00000077463	SIRT6	BLCA,CHOL,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,PAAD,THCA	CHOL
ENSG00000271971	ENSG00000092978	GPATCH2	BLCA,CHOL,COAD,ESCA,KIRC,KIRP,LAML,LIHC,READ,SKCM,STAD,UCEC	CHOL
ENSG00000271971	ENSG00000100288	CHKB	BLCA,CHOL,DLBC,ESCA,GBM,HNSC,KIRC,KIRP,LGG,LIHC,PAAD,READ,SARC,SKCM,STAD,TGCT,THCA,THYM,UCS,UVM	READ
ENSG00000271971	ENSG00000102287	GABRE	BLCA,CHOL,COAD,HNSC,KIRC,LIHC,PAAD,READ,THCA	CHOL,READ
ENSG00000271971	ENSG00000104973	MED25	BLCA,CHOL,ESCA,HNSC,KIRC,KIRP,LGG,LIHC,PAAD,THCA	CHOL
ENSG00000271971	ENSG00000105443	CYTH2	BLCA,CHOL,GBM,HNSC,KIRC,KIRP,LGG,LIHC,PAAD,SARC,THCA,UCS	CHOL
ENSG00000271971	ENSG00000107281	NPDC1	BLCA,CHOL,DLBC,ESCA,GBM,HNSC,LGG,PAAD,SARC,TGCT,THCA,UCS	CHOL
ENSG00000271971	ENSG00000122417	ODF2L	BLCA,CHOL,COAD,ESCA,KIRC,KIRP,LAML,PAAD,SKCM,STAD,TGCT,THCA,THYM,UCEC	CHOL
ENSG00000271971	ENSG00000130590	SAMD10	BLCA,CHOL,GBM,HNSC,KIRC,KIRP,LGG,LIHC,TGCT,THCA	CHOL
ENSG00000271971	ENSG00000132680	KHDC4	BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KIRC,KIRP,LAML,LGG,LIHC,OV,PAAD,READ,SARC,SKCM,STAD,THCA,UCEC,UVM	CHOL,READ
ENSG00000271971	ENSG00000134253	TRIM45	BLCA,CHOL,GBM,HNSC,KIRP,LAML,LGG,SKCM,UCEC,UVM	CHOL
ENSG00000271971	ENSG00000137343	ATAT1	BLCA,CESC,CHOL,COAD,ESCA,HNSC,KIRC,KIRP,LAML,LGG,LIHC,PAAD,READ,SARC,SKCM,STAD,TGCT,THCA	CHOL,READ
ENSG00000271971	ENSG00000138002	IFT172	BLCA,CHOL,ESCA,GBM,KIRC,KIRP,LAML,LIHC,OV,READ,SARC,THCA,UCS	CHOL
ENSG00000271971	ENSG00000139624	CERS5	BLCA,CHOL,COAD,HNSC,KIRC,KIRP,LAML,LGG,LIHC,PAAD,SARC,STAD,TGCT,THCA,UVM	CHOL
ENSG00000271971	ENSG00000141013	GAS8	BLCA,CHOL,ESCA,GBM,KIRP,LIHC,OV,PAAD,READ,SARC,THCA,UVM	CHOL
ENSG00000271971	ENSG00000142330	CAPN10	BLCA,CHOL,COAD,GBM,HNSC,KIRC,KIRP,LGG,LIHC,OV,PAAD,READ,SARC,THCA,THYM,UCS,UVM	CHOL,READ
ENSG00000271971	ENSG00000142675	CNKSR1	BLCA,CHOL,OV,PAAD,READ,THCA,UCS	CHOL,READ
ENSG00000271971	ENSG00000143643	TTC13	BLCA,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KIRC,KIRP,LIHC,TGCT,THYM,UCEC,UVM	CHOL
ENSG00000271971	ENSG00000148341	SH3GLB2	BLCA,CHOL,KIRP,LIHC,PAAD,THCA,UCS	CHOL
ENSG00000271971	ENSG00000151849	CENPJ	BLCA,CHOL,COAD,ESCA,GBM,HNSC,KIRC,KIRP,READ,SKCM,THYM,UCEC,UVM	CHOL,READ
ENSG00000271971	ENSG00000158062	UBXN11	BLCA,CESC,CHOL,ESCA,HNSC,KIRC,KIRP,LIHC,OV,PAAD,TGCT,THCA,THYM	CHOL
ENSG00000271971	ENSG00000158106	RHPN1	BLCA,BRCA,CESC,CHOL,ESCA,GBM,HNSC,KIRC,KIRP,LAML,LGG,LIHC,OV,PAAD,SARC,SKCM,TGCT,THCA,THYM,UCS	CHOL
ENSG00000271971	ENSG00000159239	RP11-523H20.5	BLCA,CHOL,DLBC,ESCA,KIRC,KIRP,PAAD,SARC,TGCT,THCA,UCS	CHOL
ENSG00000271971	ENSG00000160781	PAQR6	BLCA,CHOL,HNSC,KIRC,KIRP,PAAD,SKCM,THCA,UCS,UVM	CHOL
ENSG00000271971	ENSG00000162069	BICDL2	BLCA,BRCA,CHOL,THCA,UCS	CHOL
ENSG00000271971	ENSG00000162373	BEND5	BLCA,CHOL,LAML,PAAD,THCA	CHOL
ENSG00000271971	ENSG00000167535	CACNB3	BLCA,CHOL,KIRC,KIRP,PAAD,THYM	CHOL
ENSG00000271971	ENSG00000169217	CD2BP2	BLCA,CHOL,HNSC,LGG,LIHC,SARC,THCA	CHOL
ENSG00000271971	ENSG00000173681	BCLAF3	BLCA,CHOL,COAD,ESCA,GBM,KIRC,KIRP,LAML,PAAD,READ,SKCM,STAD,TGCT,UCEC	CHOL
ENSG00000271971	ENSG00000174943	KCTD13	BLCA,BRCA,CHOL,DLBC,ESCA,HNSC,KICH,KIRC,KIRP,LIHC,PAAD,TGCT,THCA,UCS	CHOL
ENSG00000271971	ENSG00000177548	RABEP2	BLCA,CHOL,DLBC,GBM,HNSC,KICH,KIRC,KIRP,LIHC,PAAD,TGCT,THCA,UCS	CHOL
ENSG00000271971	ENSG00000178498	DTX3	BLCA,CESC,CHOL,HNSC,KICH,KIRC,KIRP,LIHC,PAAD,TGCT,THCA,THYM,UCS	CHOL
ENSG00000271971	ENSG00000179832	MROH1	BLCA,CHOL,HNSC,KIRC,KIRP,LIHC,PAAD,UCS,UVM	CHOL
ENSG00000271971	ENSG00000182173	TSEN54	BLCA,CHOL,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,PAAD,THCA,UCS	CHOL
ENSG00000271971	ENSG00000183248	PRR36	BLCA,CHOL,ESCA,GBM,KIRP,PAAD,TGCT,THCA,UCS	CHOL
ENSG00000271971	ENSG00000185101	ANO9	BLCA,CHOL,DLBC,HNSC,KIRC,KIRP,PAAD,TGCT,UVM	CHOL
ENSG00000271971	ENSG00000186166	CENATAC	BLCA,BRCA,CESC,CHOL,COAD,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,OV,PAAD,READ,SARC,SKCM,STAD,THCA,THYM,UCEC,UCS,UVM	READ
ENSG00000271971	ENSG00000188322	SBK1	BLCA,CESC,CHOL,GBM,KIRP,UCS	CHOL
ENSG00000271971	ENSG00000189007	ADAT2	BLCA,COAD,DLBC,HNSC,LAML,PAAD,READ,SKCM,STAD,TGCT,THYM,UCEC,UCS	READ
ENSG00000271971	ENSG00000196476	C20orf96	BLCA,CESC,CHOL,ESCA,HNSC,KIRP,LAML,LIHC,OV,PAAD,SARC,SKCM,STAD,TGCT,THCA,UCS	CHOL
ENSG00000271971	ENSG00000197119	SLC25A29	BLCA,CHOL,ESCA,GBM,HNSC,KIRP,LGG,LIHC,PAAD,SARC,THCA,UCS,UVM	CHOL
ENSG00000271971	ENSG00000197948	FCHSD1	BLCA,CHOL,COAD,DLBC,GBM,KIRC,KIRP,PAAD,READ,SARC,THCA	CHOL
ENSG00000271971	ENSG00000198707	CEP290	BLCA,CHOL,COAD,ESCA,KIRC,KIRP,LAML,PAAD,READ,SKCM,STAD,TGCT,UCEC	CHOL
ENSG00000271971	ENSG00000205517	RGL3	BLCA,CESC,CHOL,ESCA,KIRC,KIRP,LIHC,OV,PAAD,THCA	CHOL
ENSG00000271971	ENSG00000213139	CRYGS	BLCA,CESC,CHOL,DLBC,KIRP,LAML,PAAD,TGCT,UCEC	CHOL
ENSG00000271971	ENSG00000213185	FAM24B	BLCA,CHOL,COAD,READ,STAD,THCA,THYM,UCS	CHOL,READ
ENSG00000271971	ENSG00000215252	GOLGA8B	BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,KICH,KIRC,KIRP,LAML,LGG,LIHC,OV,PAAD,READ,SKCM,STAD,TGCT,THCA,THYM,UCEC,UVM	READ
ENSG00000271971	ENSG00000240230	COX19	BLCA,CHOL,COAD,HNSC,KIRC,KIRP,LIHC,PAAD,READ,STAD,THCA,UVM	CHOL,READ
ENSG00000271971	ENSG00000250067	YJEFN3	BLCA,CHOL,DLBC,ESCA,GBM,KIRC,KIRP,LAML,LGG,OV,PAAD,SARC,THYM,UCS	CHOL
ENSG00000271971	ENSG00000256525	POLG2	BLCA,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KIRC,KIRP,LAML,LGG,LIHC,PAAD,READ,SARC,SKCM,STAD,THCA,THYM,UCEC,UVM	READ
ENSG00000271971	ENSG00000273899	NOL12	BLCA,CHOL,GBM,HNSC,KIRC,KIRP,LGG,LIHC,PAAD,READ,THCA,THYM	CHOL
ENSG00000271971	ENSG00000181085	MAPK15	BRCA,CESC,CHOL,HNSC,KIRC,KIRP,OV,STAD,THCA	CHOL
ENSG00000271971	ENSG00000204681	GABBR1	BRCA,CHOL,COAD,DLBC,ESCA,HNSC,KIRC,KIRP,PAAD,SARC,SKCM,STAD,THCA,UCEC,UVM	CHOL
ENSG00000271971	ENSG00000230124	ACBD6	BRCA,CHOL,GBM,HNSC,KIRC,KIRP,LAML,LGG,LIHC,PAAD,SARC,THCA	CHOL
ENSG00000271971	ENSG00000082014	SMARCD3	CESC,CHOL,KIRP,LGG,LIHC,PAAD,SARC,TGCT,THCA,UVM	CHOL
ENSG00000271971	ENSG00000143258	USP21	CESC,CHOL,DLBC,GBM,HNSC,KIRC,KIRP,LGG,LIHC,PAAD,SARC,TGCT,THCA	CHOL
ENSG00000271971	ENSG00000144134	RABL2A	CESC,CHOL,ESCA,GBM,KIRC,KIRP,LAML,LGG,OV,PAAD,SARC,THCA,THYM,UCS	CHOL
ENSG00000271971	ENSG00000147437	GNRH1	CESC,CHOL,KIRC,KIRP,LAML,PAAD,THYM	CHOL
ENSG00000271971	ENSG00000160298	C21orf58	CESC,CHOL,ESCA,GBM,HNSC,PAAD,SKCM,THYM	CHOL
ENSG00000271971	ENSG00000187535	IFT140	CESC,CHOL,ESCA,GBM,HNSC,KIRP,LAML,LGG,PAAD,SARC,TGCT	CHOL
ENSG00000271971	ENSG00000221886	ZBED8	CESC,CHOL,COAD,ESCA,HNSC,KIRC,KIRP,LAML,LGG,LIHC,PAAD,SARC,STAD,TGCT,THCA,UCEC,UVM	CHOL
ENSG00000271971	ENSG00000005448	WDR54	CHOL,KIRP,LGG,LIHC,PAAD,THCA	CHOL
ENSG00000271971	ENSG00000007384	RHBDF1	CHOL,GBM,KIRC,KIRP,LIHC,UCS	CHOL
ENSG00000271971	ENSG00000010626	LRRC23	CHOL,KIRP,LAML,PAAD,THCA	CHOL
ENSG00000271971	ENSG00000014914	MTMR11	CHOL,KIRC,KIRP,SARC,TGCT	CHOL
ENSG00000271971	ENSG00000047578	KATNIP	CHOL,GBM,KIRP,LIHC,TGCT	CHOL
ENSG00000271971	ENSG00000049089	COL9A2	CHOL,DLBC,HNSC,LIHC,UCS	CHOL
ENSG00000271971	ENSG00000054179	ENTPD2	CHOL,KIRP,LIHC,PAAD,THCA	CHOL
ENSG00000271971	ENSG00000057935	MTA3	CHOL,LIHC,SARC,THCA,THYM	CHOL
ENSG00000271971	ENSG00000061273	HDAC7	CHOL,KIRC,KIRP,LIHC,THCA,THYM	CHOL
ENSG00000271971	ENSG00000066117	SMARCD1	CHOL,GBM,KICH,LIHC,PAAD	CHOL
ENSG00000271971	ENSG00000076928	ARHGEF1	CHOL,DLBC,GBM,HNSC,KIRC,KIRP,LGG,LIHC,TGCT,THYM	CHOL
ENSG00000271971	ENSG00000080986	NDC80	CHOL,GBM,HNSC,LIHC,THYM	CHOL
ENSG00000271971	ENSG00000089820	ARHGAP4	CHOL,DLBC,HNSC,KIRC,LIHC	CHOL
ENSG00000271971	ENSG00000090924	PLEKHG2	CHOL,GBM,LIHC,TGCT,UVM	CHOL
ENSG00000271971	ENSG00000099917	MED15	CHOL,KIRC,KIRP,LGG,LIHC	CHOL
ENSG00000271971	ENSG00000102109	PCSK1N	CHOL,ESCA,KIRP,PAAD,THCA	CHOL
ENSG00000271971	ENSG00000102977	ACD	CHOL,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,PAAD,THCA	CHOL
ENSG00000271971	ENSG00000103037	SETD6	CHOL,COAD,GBM,KIRC,KIRP,LAML,LGG,LIHC,PAAD,READ,SARC,SKCM,UVM	READ
ENSG00000271971	ENSG00000104081	BMF	CHOL,HNSC,LIHC,THCA,UVM	CHOL
ENSG00000271971	ENSG00000104936	DMPK	CHOL,GBM,KIRC,KIRP,LGG,LIHC,TGCT,THCA,THYM	CHOL
ENSG00000271971	ENSG00000105486	LIG1	CHOL,GBM,HNSC,KIRC,KIRP,LIHC,PAAD,THCA	CHOL
ENSG00000271971	ENSG00000106077	ABHD11	CHOL,HNSC,KIRP,LIHC,THCA,UCS	CHOL
ENSG00000271971	ENSG00000106268	NUDT1	CHOL,HNSC,KICH,KIRP,LGG,LIHC	CHOL
ENSG00000271971	ENSG00000106462	EZH2	CHOL,GBM,HNSC,KIRC,KIRP,LIHC,UVM	CHOL
ENSG00000271971	ENSG00000108468	CBX1	CHOL,GBM,LIHC,PAAD,READ,UVM	CHOL
ENSG00000271971	ENSG00000109685	NSD2	CHOL,GBM,KIRP,LIHC,UVM	CHOL
ENSG00000271971	ENSG00000109736	MFSD10	CHOL,GBM,KICH,KIRC,KIRP,LGG,LIHC,PAAD,THCA,UCS	CHOL
ENSG00000271971	ENSG00000110844	PRPF40B	CHOL,GBM,KIRP,OV,UVM	CHOL
ENSG00000271971	ENSG00000111665	CDCA3	CHOL,GBM,HNSC,LIHC,THYM	CHOL
ENSG00000271971	ENSG00000115419	GLS	CHOL,COAD,LAML,LIHC,READ,STAD,UVM	CHOL
ENSG00000271971	ENSG00000116580	GON4L	CHOL,COAD,GBM,KIRC,LAML,LIHC,READ,UVM	CHOL
ENSG00000271971	ENSG00000117632	STMN1	CHOL,HNSC,LIHC,PAAD,THYM,UCS	CHOL
ENSG00000271971	ENSG00000119772	DNMT3A	CHOL,COAD,DLBC,GBM,HNSC,KIRC,KIRP,LIHC,PAAD,SARC,SKCM,UVM	CHOL
ENSG00000271971	ENSG00000120370	GORAB	CHOL,COAD,ESCA,HNSC,LAML,LIHC,SKCM,STAD,TGCT,UVM	CHOL
ENSG00000271971	ENSG00000121289	CEP89	CHOL,HNSC,KIRC,KIRP,LAML,LIHC,PAAD	CHOL
ENSG00000271971	ENSG00000122970	IFT81	CHOL,COAD,ESCA,GBM,HNSC,KIRC,KIRP,LAML,PAAD,READ,STAD,UVM	CHOL
ENSG00000271971	ENSG00000123136	DDX39A	CHOL,HNSC,KICH,KIRC,KIRP,LGG,LIHC,THYM	CHOL
ENSG00000271971	ENSG00000123485	HJURP	CHOL,GBM,HNSC,LIHC,THYM	CHOL
ENSG00000271971	ENSG00000124181	PLCG1	CHOL,COAD,GBM,KIRC,KIRP,READ	READ
ENSG00000271971	ENSG00000125459	MSTO1	CHOL,DLBC,GBM,HNSC,KICH,KIRC,KIRP,LAML,LIHC	CHOL
ENSG00000271971	ENSG00000125633	CCDC93	CHOL,COAD,GBM,LIHC,READ,UVM	CHOL
ENSG00000271971	ENSG00000125733	TRIP10	CHOL,KIRC,KIRP,LIHC,THCA	CHOL
ENSG00000271971	ENSG00000126001	CEP250	CHOL,GBM,LAML,LIHC,PAAD,READ	CHOL,READ
ENSG00000271971	ENSG00000130702	LAMA5	CHOL,KIRC,LIHC,PAAD,UVM	CHOL
ENSG00000271971	ENSG00000131437	KIF3A	CHOL,COAD,ESCA,LAML,OV,PAAD,READ,SARC,STAD,UVM	CHOL
ENSG00000271971	ENSG00000131470	PSMC3IP	CHOL,GBM,HNSC,KIRC,KIRP,PAAD,UVM	CHOL
ENSG00000271971	ENSG00000133059	DSTYK	CHOL,COAD,LIHC,OV,READ,UVM	CHOL
ENSG00000271971	ENSG00000135723	FHOD1	CHOL,KIRC,KIRP,LIHC,THCA	CHOL
ENSG00000271971	ENSG00000135823	STX6	CHOL,COAD,LIHC,READ,UVM	CHOL
ENSG00000271971	ENSG00000135845	PIGC	CHOL,DLBC,HNSC,LAML,LIHC,TGCT,THCA,THYM,UVM	CHOL
ENSG00000271971	ENSG00000138036	DYNC2LI1	CHOL,COAD,ESCA,HNSC,KIRP,LAML,LIHC,PAAD,READ,SARC,SKCM,STAD,UCEC,UVM	CHOL
ENSG00000271971	ENSG00000138587	MNS1	CHOL,ESCA,LAML,TGCT,THYM	CHOL
ENSG00000271971	ENSG00000139266	MARCHF9	CHOL,HNSC,KICH,KIRP,LIHC,PAAD,THCA,THYM,UCS	CHOL
ENSG00000271971	ENSG00000141858	SAMD1	CHOL,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,PAAD,THCA,THYM	CHOL
ENSG00000271971	ENSG00000142632	ARHGEF19	CHOL,HNSC,TGCT,THCA,UCS	CHOL
ENSG00000271971	ENSG00000143156	NME7	CHOL,COAD,LAML,LIHC,UVM	CHOL
ENSG00000271971	ENSG00000145014	TMEM44	CHOL,DLBC,KIRC,KIRP,LIHC,TGCT,THCA,THYM	CHOL
ENSG00000271971	ENSG00000147400	CETN2	CHOL,KIRP,LIHC,PAAD,THCA	CHOL
ENSG00000271971	ENSG00000148814	LRRC27	CHOL,KIRC,KIRP,LAML,LGG,THCA	CHOL
ENSG00000271971	ENSG00000149636	DSN1	CHOL,HNSC,KIRP,LIHC,READ,UVM	CHOL,READ
ENSG00000271971	ENSG00000149639	SOGA1	CHOL,COAD,GBM,LIHC,READ	CHOL
ENSG00000271971	ENSG00000149716	LTO1	CHOL,COAD,DLBC,GBM,KICH,KIRC,KIRP,LAML,LGG,PAAD,THCA,THYM,UCEC,UVM	CHOL
ENSG00000271971	ENSG00000151725	CENPU	CHOL,HNSC,THYM,UCS,UVM	CHOL
ENSG00000271971	ENSG00000152457	DCLRE1C	CHOL,COAD,ESCA,KIRC,LAML,READ,STAD	CHOL
ENSG00000271971	ENSG00000153044	CENPH	CHOL,GBM,HNSC,LIHC,UVM	CHOL
ENSG00000271971	ENSG00000154930	ACSS1	CHOL,HNSC,LIHC,READ,TGCT	CHOL
ENSG00000271971	ENSG00000155111	CDK19	CHOL,COAD,LIHC,READ,TGCT	CHOL
ENSG00000271971	ENSG00000157992	KRTCAP3	CHOL,DLBC,KIRP,LAML,LIHC,THCA	CHOL
ENSG00000271971	ENSG00000159314	ARHGAP27	CHOL,KIRC,KIRP,LIHC,UCS	CHOL
ENSG00000271971	ENSG00000160051	IQCC	CHOL,ESCA,GBM,HNSC,KIRC,KIRP,LAML,LGG,PAAD,THCA,UVM	CHOL
ENSG00000271971	ENSG00000160191	PDE9A	CHOL,LGG,LIHC,PAAD,SARC,UCS	CHOL
ENSG00000271971	ENSG00000160360	GPSM1	CHOL,GBM,KICH,KIRP,LGG,TGCT	CHOL
ENSG00000271971	ENSG00000163159	VPS72	CHOL,HNSC,LGG,LIHC,PAAD,SARC,THCA	CHOL
ENSG00000271971	ENSG00000163257	DCAF16	CHOL,COAD,GBM,LAML,LIHC,PAAD,READ,UVM	CHOL
ENSG00000271971	ENSG00000163472	TMEM79	CHOL,GBM,KICH,KIRC,LGG,LIHC,SARC,UVM	CHOL
ENSG00000271971	ENSG00000164104	HMGB2	CHOL,GBM,HNSC,KIRC,KIRP,LIHC,READ,SKCM,THYM,UVM	CHOL
ENSG00000271971	ENSG00000164877	MICALL2	CHOL,HNSC,KIRC,KIRP,LIHC,PAAD,THCA,UVM	CHOL
ENSG00000271971	ENSG00000164934	DCAF13	CHOL,LAML,READ,SKCM,UVM	READ
ENSG00000271971	ENSG00000164983	TMEM65	CHOL,COAD,ESCA,LAML,LIHC,READ,SKCM,TGCT,UCEC,UVM	CHOL
ENSG00000271971	ENSG00000165138	ANKS6	CHOL,DLBC,GBM,LIHC,UCS	CHOL
ENSG00000271971	ENSG00000166012	TAF1D	CHOL,COAD,KIRC,KIRP,LAML,LGG,LIHC,READ,SKCM,STAD,THCA,UCEC,UVM	CHOL,READ
ENSG00000271971	ENSG00000166135	HIF1AN	CHOL,COAD,LAML,LIHC,PAAD	CHOL
ENSG00000271971	ENSG00000166839	ANKDD1A	CHOL,GBM,LGG,OV,SKCM,TGCT,UCS,UVM	CHOL
ENSG00000271971	ENSG00000166925	TSC22D4	CHOL,KICH,LIHC,PAAD,UCS	CHOL
ENSG00000271971	ENSG00000167523	SPATA33	CHOL,HNSC,KIRC,KIRP,PAAD,THCA,THYM	CHOL
ENSG00000271971	ENSG00000168393	DTYMK	CHOL,HNSC,KIRP,LIHC,UCS,UVM	CHOL
ENSG00000271971	ENSG00000171456	ASXL1	CHOL,COAD,GBM,KIRC,KIRP,LIHC,READ,TGCT	READ
ENSG00000271971	ENSG00000171960	PPIH	CHOL,HNSC,KIRP,LGG,LIHC,THCA	CHOL
ENSG00000271971	ENSG00000171962	DRC3	CHOL,KIRC,KIRP,LAML,OV,THCA	CHOL
ENSG00000271971	ENSG00000173457	PPP1R14B	CHOL,KICH,KIRP,LGG,LIHC	CHOL
ENSG00000271971	ENSG00000176454	LPCAT4	CHOL,KICH,KIRC,KIRP,LAML,LIHC,THCA,UVM	CHOL
ENSG00000271971	ENSG00000180891	CUEDC1	CHOL,GBM,HNSC,KIRP,LGG,LIHC,PAAD,TGCT	CHOL
ENSG00000271971	ENSG00000183742	MACC1	CHOL,COAD,LAML,READ,UCS	CHOL,READ
ENSG00000271971	ENSG00000184445	KNTC1	CHOL,COAD,GBM,HNSC,KIRC,KIRP,LIHC	CHOL
ENSG00000271971	ENSG00000184916	JAG2	CHOL,KIRP,LIHC,PAAD,UVM	CHOL
ENSG00000271971	ENSG00000185158	LRRC37B	CHOL,ESCA,GBM,KIRC,KIRP,LAML,LGG,PAAD,SKCM,STAD,THCA,THYM,UCEC	CHOL
ENSG00000271971	ENSG00000186111	PIP5K1C	CHOL,DLBC,KICH,LIHC,TGCT	CHOL
ENSG00000271971	ENSG00000188549	CCDC9B	CHOL,GBM,KIRP,LIHC,UVM	CHOL
ENSG00000271971	ENSG00000196465	MYL6B	CHOL,KIRP,LIHC,PAAD,THCA	CHOL
ENSG00000271971	ENSG00000197183	NOL4L	CHOL,GBM,LAML,LIHC,TGCT,UCS	CHOL
ENSG00000271971	ENSG00000197461	PDGFA	CHOL,KIRP,LIHC,READ,UVM	CHOL
ENSG00000271971	ENSG00000203965	EFCAB7	CHOL,ESCA,KIRC,KIRP,LAML,SKCM,TGCT,UCEC	CHOL
ENSG00000271971	ENSG00000204130	RUFY2	CHOL,COAD,KIRC,LAML,STAD,TGCT,UCEC	CHOL
ENSG00000271971	ENSG00000205078	SYCE1L	CHOL,HNSC,KIRC,KIRP,PAAD,TGCT,THCA,UCS	CHOL
ENSG00000271971	ENSG00000205268	PDE7A	CHOL,COAD,GBM,KIRC,LIHC,READ,SKCM,THYM,UVM	CHOL
ENSG00000271971	ENSG00000213923	CSNK1E	CHOL,GBM,KIRC,KIRP,LGG,LIHC,PAAD,UVM	CHOL
ENSG00000271971	ENSG00000214193	SH3D21	CHOL,KIRC,LAML,THCA,UVM	CHOL
ENSG00000271971	ENSG00000221838	AP4M1	CHOL,HNSC,KIRP,LGG,LIHC,PAAD,SARC,THCA	CHOL
ENSG00000271971	ENSG00000240771	ARHGEF25	CHOL,KIRP,LIHC,OV,TGCT,THCA,UVM	CHOL
ENSG00000271971	ENSG00000241343	RPL36A	CHOL,KICH,LGG,LIHC,READ,SKCM,THCA	CHOL
ENSG00000271971	ENSG00000243364	EFNA4	CHOL,HNSC,KIRP,LIHC,THCA	CHOL
ENSG00000271971	ENSG00000258839	MC1R	CHOL,ESCA,KIRP,LGG,PAAD,THCA,UVM	CHOL
ENSG00000271971	ENSG00000275023	MLLT6	CHOL,GBM,KIRC,KIRP,LIHC,PAAD,SARC,TGCT,UVM	CHOL
ENSG00000271971	ENSG00000278259	MYO19	CHOL,GBM,KIRP,LGG,LIHC,UVM	CHOL
ENSG00000271971	ENSG00000120256	LRP11	COAD,ESCA,LIHC,READ,UVM	READ

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lncRNAs regulate the target genes through recruiting transcript factors

LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).

lncRNA ID	TF ID	TF Name	PCgene ID	PCgene Name	Number of Cancer	Canaer Types
ENSG00000271971	ENSG00000104885	DOT1L	ENSG00000100359	SGSM3	5	CHOL,GBM,KIRP,LGG,LIHC
ENSG00000271971	ENSG00000104885	DOT1L	ENSG00000148399	DPH7	5	CHOL,GBM,KIRP,LGG,LIHC
ENSG00000271971	ENSG00000104885	DOT1L	ENSG00000128191	DGCR8	5	CHOL,GBM,KIRP,LGG,LIHC
ENSG00000271971	ENSG00000104885	DOT1L	ENSG00000178971	CTC1	5	CHOL,GBM,KIRP,LGG,LIHC
ENSG00000271971	ENSG00000104885	DOT1L	ENSG00000124222	STX16	5	CHOL,GBM,KIRP,LGG,LIHC
ENSG00000271971	ENSG00000104885	DOT1L	ENSG00000100416	TRMU	5	CHOL,GBM,KIRP,LGG,LIHC
ENSG00000271971	ENSG00000104885	DOT1L	ENSG00000129484	PARP2	5	CHOL,GBM,KIRP,LGG,LIHC
ENSG00000271971	ENSG00000104885	DOT1L	ENSG00000099326	MZF1	5	CHOL,GBM,KIRP,LGG,LIHC
ENSG00000271971	ENSG00000104885	DOT1L	ENSG00000172613	RAD9A	5	CHOL,GBM,KIRP,LGG,LIHC
ENSG00000271971	ENSG00000104885	DOT1L	ENSG00000177051	FBXO46	5	CHOL,GBM,KIRP,LGG,LIHC
ENSG00000271971	ENSG00000104885	DOT1L	ENSG00000132680	KHDC4	5	CHOL,GBM,KIRP,LGG,LIHC
ENSG00000271971	ENSG00000104885	DOT1L	ENSG00000185917	SETD4	5	CHOL,GBM,KIRP,LGG,LIHC
ENSG00000271971	ENSG00000104885	DOT1L	ENSG00000100083	GGA1	5	CHOL,GBM,KIRP,LGG,LIHC
ENSG00000271971	ENSG00000104885	DOT1L	ENSG00000109046	WSB1	5	CHOL,GBM,KIRP,LGG,LIHC
ENSG00000271971	ENSG00000104885	DOT1L	ENSG00000105443	CYTH2	5	CHOL,GBM,KIRP,LGG,LIHC
ENSG00000271971	ENSG00000181827	RFX7	ENSG00000104517	UBR5	5	CHOL,COAD,GBM,LAML,LUAD
ENSG00000271971	ENSG00000104885	DOT1L	ENSG00000163660	CCNL1	5	CHOL,GBM,KIRP,LGG,LIHC
ENSG00000271971	ENSG00000104885	DOT1L	ENSG00000154370	TRIM11	5	CHOL,GBM,KIRP,LGG,LIHC
ENSG00000271971	ENSG00000104885	DOT1L	ENSG00000099622	CIRBP	5	CHOL,GBM,KIRP,LGG,LIHC

LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.

LncRNA Ensembl ID	LncRNA ENST ID	PC Gene Name	PC Gene ID	PC ENST ID	dG	nDG	Cancer with PC gene up-regulation	Cancer with PC gene Down-regulation
ENSG00000271971	ENST00000607706	ALAS1	ENSG00000023330	ENST00000493402	-0.1611	415	-	CHOL
ENSG00000271971	ENST00000607706	FAH	ENSG00000103876	ENST00000561353	-0.1264	114	-	CHOL
ENSG00000271971	ENST00000607706	CLPB	ENSG00000162129	ENST00000535990	-0.2203	5	-	CHOL
ENSG00000271971	ENST00000607706	CLPB	ENSG00000162129	ENST00000340729	-0.2203	5	-	CHOL
ENSG00000271971	ENST00000607706	CLPB	ENSG00000162129	ENST00000543042	-0.1450	224	-	CHOL
ENSG00000271971	ENST00000607706	ETHE1	ENSG00000105755	ENST00000600651	-0.1145	289	-	READ

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lncRNAs regulate mRNA by competing with miRNA

lncRNA regulates mRNA by competing the miRNA binding site with mRNA.

LncRNA Ensembl ID	lncRNA-miRNA-mRNA	Cancer Types
ENSG00000271971	CTD-2006H14.2,hsa-mir-1247,GTF3C5	LGG,PRAD,GBM,PAAD,KIRP
ENSG00000271971	CTD-2006H14.2,hsa-mir-1247,PRKRIP1	LGG,PRAD,GBM,PAAD,KIRP
ENSG00000271971	CTD-2006H14.2,hsa-mir-22,ATAT1	CESC,CHOL,LGG,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-22,TADA2A	CESC,CHOL,LGG,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-22,NRF1	CESC,CHOL,LGG,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-22,EHMT2	CESC,CHOL,LGG,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-22,VEZF1	CESC,CHOL,LGG,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-22,PAXBP1	CESC,CHOL,LGG,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-22,CEP131	CESC,CHOL,LGG,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-22,MBTD1	CESC,CHOL,LGG,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-22,RBMX	CESC,CHOL,LGG,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-22,CCDC174	CESC,CHOL,LGG,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-22,C14orf93	CESC,CHOL,LGG,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-22,POLL	CESC,CHOL,LGG,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-22,MKS1	CESC,CHOL,LGG,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-22,PCIF1	CESC,CHOL,LGG,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-22,ING4	CESC,CHOL,LGG,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-22,ZNF16	CESC,CHOL,LGG,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,DENND6B	TGCT,CHOL,UVM,PAAD,KIRP
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,MSI2	TGCT,CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,SMARCE1	TGCT,CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,SMAD2	CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,GGPS1	CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,DXO	TGCT,CHOL,ACC,PAAD,KIRP
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,TNRC18	TGCT,CHOL,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,RAI1	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,VMAC	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,FUT11	TGCT,CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,VEZF1	TGCT,CHOL,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,DERL2	TGCT,CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,ARID4B	TGCT,CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,BCLAF1	CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,SLC37A1	CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,SEPTIN8	TGCT,CHOL,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,SNAPIN	TGCT,CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,C12orf76	TGCT,CHOL,PAAD,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,MRPS14	TGCT,CHOL,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,C1orf43	TGCT,CHOL,UVM,ACC,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,MEX3C	CHOL,LGG,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,TMEM9	TGCT,CHOL,UVM,ACC,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,C22orf46	TGCT,CHOL,UVM,ACC,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,CERS5	CHOL,UVM,PAAD,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,TBL2	TGCT,CHOL,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,USP3	TGCT,CHOL,LGG,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,DLG4	TGCT,UVM,ACC,PAAD,KIRP
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,NLK	CHOL,UVM,ACC,PAAD,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,TM9SF3	TGCT,CHOL,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,MPZL1	TGCT,CHOL,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,RBM8A	CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,SOCS5	TGCT,CHOL,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,ATP9A	TGCT,CHOL,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,BRSK1	TGCT,CHOL,ACC,PAAD,KIRP
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,MLH3	TGCT,CHOL,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,CAPN2	TGCT,CHOL,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,DEDD	TGCT,CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,ABCA2	TGCT,CHOL,UVM,PAAD,KIRP
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,CAMSAP2	TGCT,CHOL,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,RGL2	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,TTC3	TGCT,CHOL,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,SERPINB1	CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,PIP5K1A	CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,C1orf35	CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,TIA1	TGCT,CHOL,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,CTPS2	TGCT,CHOL,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,GORASP2	TGCT,CHOL,UVM,ACC,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,SDF2	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,PIP4K2B	TGCT,CHOL,ACC,PAAD,KIRP
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,CHST14	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,HOOK3	TGCT,CHOL,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,KCTD3	TGCT,CHOL,UVM,ACC,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,BTBD2	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,UNC119B	CHOL,ACC,PAAD,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,OBSL1	TGCT,ACC,PAAD,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,CNP	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,USP21	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,COIL	CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,PEA15	TGCT,CHOL,LGG,UVM,ACC,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,RIT1	TGCT,CHOL,UVM,ACC,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,DSTYK	CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,PLXNA3	TGCT,CHOL,UVM,PAAD,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,ETV6	TGCT,CHOL,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,FIZ1	TGCT,CHOL,PAAD,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,SETD4	CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,FANCF	TGCT,CHOL,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,YWHAE	CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,EPC1	TGCT,CHOL,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,TMCO1	TGCT,CHOL,UVM,ACC,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,PIK3C3	TGCT,CHOL,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,PTTG1IP	TGCT,CHOL,LGG,UVM,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,MSL1	TGCT,CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,COA5	TGCT,CHOL,LGG,UVM,ACC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,EXT1	TGCT,CHOL,UVM,ACC,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,DTX3	TGCT,CHOL,ACC,PAAD,KIRP
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,SRR	TGCT,CHOL,LGG,UVM,KIRP
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,AMMECR1L	CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,ARV1	TGCT,CHOL,UVM,ACC,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,PLXNB1	TGCT,CHOL,LGG,PAAD,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,PIGM	TGCT,CHOL,UVM,ACC,KIRP,LIHC
ENSG00000271971	CTD-2006H14.2,hsa-mir-378a,POFUT2	TGCT,CHOL,UVM,ACC,PAAD,KIRP

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lncRNA coding potential

ORFfinder result for the gencode.v22.lncRNA.transcript.fa.

lncRNA Ensembl ID	lncRNA ENST ID	length(AA)	start at transcript	end at transcript
ENSG00000271971.1	ENST00000607706.1	42	67	195

	lncRNA summary
	lncRNA structure and expression level
	lncRNA-Protein interaction
	lncRNA-DNA interaction
	lncRNA-RNA interaction
	Variants in lncRNA
	lncRNAs regulate the target genes through functioning as enhancers
	lncRNAs regulate the target genes through recruiting transcript factors
	lncRNAs regulate the alternative splicing events through interacting with splicing factor
	lncRNAs regulate mRNA through targeting the 3'-UTR region
	lncRNAs regulate mRNA by competing with miRNA
	lncRNA coding potential