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lncRNA: ENSG00000271614 |
Summary for ATP2B1-AS1 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000271614 | Gene symbol | ATP2B1-AS1 |
| Gene name | ATP2B1 antisense RNA 1 | |
| HGNC | 27883 | |
| Entrez ID | 338758 | |
| Gene type | lincRNA | |
| Synonyms | ATP2B1-AS1|LINC00936|12q21.33 | |
| UniProtAcc |
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Structure and expression level for ATP2B1-AS1 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000271614 | 1.915465e+02 | -2.495190e+00 | 3.286149e-01 | -7.593053e+00 | 3.120000e-14 | 1.160000e-12 | DOWN | GBM |
| ENSG00000271614 | 3.723153e+02 | 1.834929e+00 | 4.284591e-01 | 4.282623e+00 | 1.850000e-05 | 4.422290e-04 | UP | PCPG |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000271614 | -4.149976e-01 | 5.262118e-05 | KICH | 9.467114e-05 |
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lncRNA-Protein interaction for ATP2B1-AS1 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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