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lncRNA: ENSG00000267344 |
Summary for CTB-39G8.3 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000267344 | Gene symbol | CTB-39G8.3 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | antisense | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for CTB-39G8.3 |
| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000267344 | 3.418032e+01 | 2.151028e+00 | 4.274278e-01 | 5.032494e+00 | 4.840000e-07 | 3.380000e-06 | UP | CHOL |
| ENSG00000267344 | 3.190742e+01 | 2.216503e+00 | 1.557162e-01 | 1.423425e+01 | 5.620000e-46 | 1.150000e-44 | UP | KIRC |
| ENSG00000267344 | 4.818741e+01 | 3.066315e+00 | 7.659400e-01 | 4.003335e+00 | 6.250000e-05 | 8.306070e-04 | UP | CESC |
| ENSG00000267344 | 5.512505e+01 | 2.230154e+00 | 2.279817e-01 | 9.782160e+00 | 1.340000e-22 | 4.210000e-21 | UP | KIRP |
| ENSG00000267344 | 1.702307e+01 | 1.269015e+00 | 2.131114e-01 | 5.954701e+00 | 2.610000e-09 | 1.520000e-08 | UP | UCEC |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000267344 | 6.024706e-01 | 1.192826e-05 | CHOL | 7.776488e-05 |
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lncRNA-Protein interaction for CTB-39G8.3 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000267344 | ENST00000592389 | CTB-39G8.3 | ENSG00000147854 | UHRF2 | 49.15 | 90.8825 | Q96PU4 | Epi | NA |
| ENSG00000267344 | ENST00000592389 | CTB-39G8.3 | ENSG00000115524 | SF3B1 | 32.39 | 93.7723 | O75533 | Epi | NA |
| ENSG00000267344 | ENST00000592389 | CTB-39G8.3 | ENSG00000139613 | SMARCC2 | 34.49 | 91.5018 | Q8TAQ2 | Epi | NA |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000267344 | ENST00000592389 | CTB-39G8.3 | ENSG00000170581 | STAT2 | 41.22 | 90.9711 | P52630 | TF | NA |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000267344 | ENST00000592389 | CTB-39G8.3 | ENSG00000122965 | RBM19 | 43.0 | 91.5864 | Q9Y4C8 | RBP | NA |
| ENSG00000267344 | ENST00000592389 | CTB-39G8.3 | ENSG00000129566 | TEP1 | 40.83 | 91.2744 | Q99973 | RBP | NA |
| ENSG00000267344 | ENST00000592389 | CTB-39G8.3 | ENSG00000139746 | RBM26 | 35.64 | 91.9165 | Q5T8P6 | RBP | NA |
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