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lncRNA: ENSG00000267280 |
Summary for TBX2-AS1 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000267280 | Gene symbol | TBX2-AS1 |
| Gene name | TBX2 antisense RNA 1 | |
| HGNC | 50355 | |
| Entrez ID | 103689912 | |
| Gene type | antisense | |
| Synonyms | 17q23.2|TBX2-AS1 | |
| UniProtAcc |
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Structure and expression level for TBX2-AS1 |
| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000267280 | 1.578479e+02 | 3.074814e+00 | 4.313823e-01 | 7.127815e+00 | 1.020000e-12 | 2.930000e-11 | UP | GBM |
| ENSG00000267280 | 5.145659e+02 | 1.567834e+00 | 4.667043e-01 | 3.359373e+00 | 7.811940e-04 | 3.105619e-03 | UP | BLCA |
| ENSG00000267280 | 1.126421e+02 | -1.237477e+00 | 3.174983e-01 | -3.897585e+00 | 9.720000e-05 | 2.995820e-04 | DOWN | KIRP |
| ENSG00000267280 | 3.878336e+01 | -2.110275e+00 | 2.780180e-01 | -7.590426e+00 | 3.190000e-14 | 3.110000e-13 | DOWN | UCEC |
| ENSG00000267280 | 3.333844e+02 | 3.153819e+00 | 7.286844e-01 | 4.328099e+00 | 1.500000e-05 | 3.705410e-04 | UP | PCPG |
| ENSG00000267280 | 1.770696e+02 | -1.119364e+00 | 1.856684e-01 | -6.028835e+00 | 1.650000e-09 | 1.060000e-08 | DOWN | PRAD |
| ENSG00000267280 | 8.470864e+01 | -1.635426e+00 | 1.963079e-01 | -8.330922e+00 | 8.020000e-17 | 4.350000e-16 | DOWN | LUSC |
| ENSG00000267280 | 6.305339e+01 | -2.035248e+00 | 1.539757e-01 | -1.321799e+01 | 6.910000e-40 | 2.330000e-38 | DOWN | LUAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000267280 | -4.328463e-01 | 2.270759e-05 | KICH | 4.519090e-05 |
| ENSG00000267280 | -3.258043e-01 | 5.875657e-16 | LUAD | 1.018548e-14 |
| ENSG00000267280 | -3.294245e-01 | 2.524150e-16 | UCEC | 3.487916e-15 |
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lncRNA-Protein interaction for TBX2-AS1 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000267280 | ENST00000590421 | TBX2-AS1 | ENSG00000141570 | CBX8 | 54.82 | 90.7048 | Q9HC52 | Epi | ChIP-seq |
| ENSG00000267280 | ENST00000590421 | TBX2-AS1 | ENSG00000154832 | CXXC1 | 18.87 | 92.0779 | Q9P0U4 | TF,Epi | Predict |
| ENSG00000267280 | ENST00000591313 | TBX2-AS1 | ENSG00000154832 | CXXC1 | 29.16 | 90.7308 | Q9P0U4 | TF,Epi | Predict |
| ENSG00000267280 | ENST00000590421 | TBX2-AS1 | ENSG00000204227 | RING1 | 27.13 | 91.2167 | Q06587 | Epi | ChIP-seq |
| ENSG00000267280 | ENST00000591313 | TBX2-AS1 | ENSG00000065717 | TLE2 | 29.99 | 90.5933 | Q04725 | Epi | Predict |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000267280 | ENST00000590421 | TBX2-AS1 | ENSG00000121068 | TBX2 | 21.09 | 92.124 | Q13207 | TF | NA |
| ENSG00000267280 | ENST00000590421 | TBX2-AS1 | ENSG00000154832 | CXXC1 | 18.87 | 92.0435 | Q9P0U4 | TF,Epi | Predict |
| ENSG00000267280 | ENST00000591313 | TBX2-AS1 | ENSG00000154832 | CXXC1 | 29.16 | 90.5176 | Q9P0U4 | TF,Epi | Predict |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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