 lncRNA targets the enhancer region and positively regulates the gene expression. |
| Only predicted by TDF | | POLR1D,RPAP2,DLGAP5,COPS7B,SKA3,ARL16,UXT,TCEA2,SLIRP,CEP76,PRPSAP2,TXNL1,NUP43,KRT10,CENPK,WDR89,FASTKD3,CIRBP,PSMB7,PET100,DYNC2LI1,MZF1,CMC2,WDR83OS,CNOT9,SRP19,RHNO1,PPP2R3B,DCLRE1C,TDP2,CACYBP,RPS27A,PHF10,UTP18,ING1,MAK16,SENP1,LMBR1L,TIMM17B,ZNF24,ISCU,BCCIP,WDCP,PIGX,BCL7A,METTL5,ENY2,ZFP14,STK16,CENATAC,SNRPA,WDR54,SAFB2,KCTD13,SNAPC1,DTYMK,MSANTD2,TIMELESS,CCDC14,FAM200A,PPIL3,LZTFL1,STRBP,POLR2K,COMMD2,COMMD7,COA3,ZUP1,STRADB,UBE2T,KPNB1,FAM133B,SURF2,DEK,UBE2N,ZBED5,GNPAT,PPIH,ACTR6,UBA2,RECQL4,KLHL42,KNTC1,KNSTRN,SVBP,SUDS3,SMIM15,GKAP1,SPRN,SUGP1,GINS2,DNTTIP2,NABP2,C19orf44,FAM104B,DAXX,SIAH1,GTF2H5,USE1,SMAD2,RAMAC,DNAJC2,RCCD1,CCNB1IP1,SDF2,CBX3,ERAL1,CLK2,WDR70,CARNMT1,PPIL4,TARBP2,ILKAP,FIG4,LYRM4,MPLKIP,POLG2,FBXO5,GLO1,FANCD2,PRCC,RING1,SMC2,ENSA,PSENEN,PSIP1,TMEM242,IFT81,METTL17,RIC8B,UBE3A,ANAPC10,RPAP3,MBD2,GTF2F1,SNHG32,CBY1,WDR83,OSGEP,BLM,WDR5,GABPB1,NASP,H3-3A,ANKRD39,PRC1,WASHC3,RPAIN,OFD1,BTF3,ACYP1,RBBP4,TOMM40,ARHGAP11A,PIH1D1,MSH6,HELLS,CDKN2AIPNL,COPS3,CFAP298,GAR1,MIS12,DERL2,CBX1,SKP2,CCT8,RSRC2,MRPS35,TTC21B,TTF1,C19orf48,CAMKMT,PFDN6,LMAN2L,FANCF,ZWINT,C4orf46,C3orf62,CSNK2B,NAA25,ILF2,YJU2,NEMP1,CDC25C,MIS18BP1,ALKBH2,MEA1,CENPA,RPL35,ANAPC5,NARS1,ORMDL1,PARL,RPP38,C18orf21,RAB5A,C22orf39,SRPK1,C12orf73,DONSON,AGER,BRIX1,FUZ,ESS2,ORC2,PRPF38A,MCM3,SPOUT1,GUF1,UBE2E1,GPN3,SBNO1,SRSF2,C1orf52,PPP6C,BTF3L4,TFCP2,MRPL32,TSEN54,LRRC37B,UBE2C,CENPM,SUPT20H,MRPL57,PAFAH1B3,DCUN1D2,UBXN2A,TRIP13,KIF23,C2orf76,PFDN5,BUB3,PPP4R2,RIOK1,HROB,DUS3L,SMARCAD1,HMGN3,EBPL,ZNF14,RMI1,NOP2,PPT2,CHEK1,CENPH,AATF,SSX2IP,CCAR2,XPO1,CZIB,CDC123,PBK,METTL4,CIR1,NFYB,MBTD1,HDDC2,C9orf40,ELOF1,SEPSECS,DCUN1D5,HEXD,COA6,SDHAF2,KLHL23,HDAC8,VCPKMT,DENR,CEP192,NSFL1C,LYSMD1,SEPHS1,CCDC12,KAT14,ORC6,PTRHD1,SVIP,ZNF69,EAPP,ABCE1,CCDC34,PGGT1B,THOC7,RALBP1,COX7A2,ERCC5,ZFP3,SLF1,SWT1,CDCA3,RSL24D1,RNFT2,TRIR,ZNF30,SKA2,RARS2,OARD1,DPM1,RAB28,RTRAF,FLVCR1,TEDC2,FANCL,ILF3,BRAP,EMG1,LCORL,RANBP3,STK11,PRR3,NFU1,WBP4,CEP57,MIB1,PPOX,IP6K2,THOC3,WDR53,PIF1,YWHAE,PPWD1,DBF4,RELCH,TRMT6,PRPF40A,SASS6,RBM27,ATG12,RPL23,AHI1,C19orf53,INO80C,FASTKD1,INO80D,SPATA5L1,ICE2,TMEM18,COX16,EIF2B4,TIMM44,DDX55,HSCB,RPL22L1,UCHL3,MIX23,PFDN2,GLMN,SMARCB1,METTL21A,FAM136A,GCFC2,RPL37A,LSM3,CCDC59,ASF1A,PCLAF,ACBD6,RPA1,KIAA1143,EZH2,HMGN2,UNG,TAMM41,IFT74,IMP4,SNRNP48,PCBP2,MZT1,ZNF44,NECAB3,ARL6IP1,TRIM13,UFL1,MRM3,CCDC138,TAF8,VAPA,KANSL2,POLR3K,TBCA,TMEM251,TPT1,CWC15,ZCCHC9,MED6,CCDC137,GGCT,IFT80,LAS1L,CEP83,DDX20,HMGB1,RFC4,MED27,XRCC4,NELFE,OIP5,METTL23,RTF1,TSN,C17orf75,PARP2,SBK1,PATZ1,ZBTB2,RTTN,IWS1,SMCHD1,C11orf98,NT5DC2,ELP5,EHMT2,TBCB,MTA3,DYNLT2,ZC3H8,GNL2,NDC80,ENOSF1,THOC6,UBOX5,ANKRD49,PAXBP1,DNAJC19,LEMD2,PTTG1,PQBP1,LENG1,MEX3A,FNTA,MASTL,ZNF48,TADA2A,MRPS23,GOLT1B,ATF4,CCHCR1,TOMM22,REXO4,PTRH2,LRR1,SGF29,NAP1L1,TBCD,CETN3,NXT1,NKAP,CENPO,MBD3,TPGS2,NVL,PWWP2A,CIAO2A,VPS28,FIZ1,CHRAC1,AKIRIN2,TATDN2,MYNN,SUMO2,AK6,MRPS9,HDAC2,CNPY3,UPF3B,LINS1,TMPO,IFT20,TMEM199,PTOV1,SCAF11,CDC6,HAUS1,NDUFA12,C18orf32,NDUFAF5,FRS3,GPBP1,C2orf68,MRE11,CNOT7,SPC24,PSMG2,NDUFAF7,MFF,FRG1,TRMT13,TXNDC9,KRTCAP2,TRIM28,TRIAP1,NPM3,SREK1IP1,POP5,PPM1G,CCT7,SYF2,VPS54,SMAD4,SPC25,ACP1,CBX5,LTA4H,ANP32E,NSL1,RAD51,FKBP3,UBE2L3,NAP1L4,RBM8A,CCNA2,PHF5A,NAIF1,SSBP3,KHDC4,DCAF15,CERS5,PDCD2L,RSAD1,R3HDM4,USF2,NCAPH2,PCGF6,PNISR,GEN1,RP9,SFPQ,SNRNP40,GLOD4,PSMD12,NUCKS1,RFC2,TCEAL8,ZNF10,SRSF7,VPS72,SINHCAF,BLOC1S1,CENPU,ATAT1,TAF11,MORN2,DUT,STMN1,NUDT1,EIF3J,PYM1,ESCO1,ZBTB8OS,AFG3L2,CEP63,TMX3,MYPOP,CTBP1,MRPL34,ANGEL2,BICRA,GRSF1,PARPBP,MDM1,SEM1,ROCK1,TIGD5,STMP1,POC5,N4BP2,PHF19,AKAP8,CDPF1,FANCG,ARID2,MRPL47,UBTF,ASPM,DTD2,UBE2J2,TJAP1,C12orf29,NAT14,SMARCE1,RBBP8,TAF1D,WDR12,KATNBL1,MKS1,MYL12B,C1orf35,CCDC174,HES6,YEATS4,TIMM13,MTIF3,C7orf26,NDUFA7,FOXRED1,MARCHF9,DDX52,BUD23,PIGC,C14orf119,COX11,TBP,GABPA,PSMG1,MRPL2,COQ3,SUV39H2,SUGT1,KLHDC4,EFNA4,MIS18A,AFTPH,EIPR1,CDC45,DCAKD,POLE2,FBXO46,CCDC115,BARD1,RPS6KB1,CTDP1,OBI1,UQCRB,NUSAP1,CCDC77,TIMM9,CHTOP,TFAP4,MIEN1,TATDN1,LSM5,DHX57,CCSAP,MED25,DSCC1,SEC61B,TDP1,CDC25A,PTCD3,ZMAT5,ORC3,STX10,LLPH,CENPQ,C1QBP,KAT2A,NEK2,TXNDC12,RAD1,SNU13,TMEM223,CSTF3,RBM26,SNRPD3,PLA2G6,RNPS1,C5orf22,ZBTB3,SAP18,PDCD2,C1orf131,CEBPZOS,DPY30,SPRTN,MRPL50,TMTC4,SF3B6,PTS,AURKB,ELP6,LIN9,SEMA6C,PRPF39,ETNK1,TMEM258,MRPL22,DTL,PRR36,TMEM41B,DCAF17,GEMIN6,LTV1,TXN,ZNF22,PHF1,HIRA,TMEM69,APOO,TMEM128,CNOT11,TGIF2,CEP44,TDG,NEPRO,POLR2D,GMCL1,ANKRD54,C10orf88,MARCKSL1,SUMO1,VPS33A,RAD51C,ORC5,KRI1,RNF25,PPP4R1,BCL2L12,MEAF6,TMEM60,NUP88,PSPC1,KRR1,HSPBAP1,YAE1,RBL1,COX7A2L,DYRK4,R3HDM2,CENPS,PMS1,RPS6,POLR1C,MRPL39,NR2C2AP,APEX1,GEMIN2,HDHD5,TIA1,MED4,ZNF83,PPP4R3A,SAAL1,ZNF3,C5orf34,DNMT3A,HAUS6,PTPN2,MAD2L1,CDK2,SLBP,PELP1,MYL6B,NOL7,SAYSD1,C19orf25,SMARCD1,POLE,EIF5B,MYG1,ABHD10,DTX3,ZMYND19,THOP1,GIN1,MRPS10,TLE5,ZCCHC10,PPP2R5E,LIPT1,CPNE1,NDUFA5,PDE6D,SUV39H1,LUC7L,LSM2,NUDCD2,NKIRAS2,PCNA,ZNF43,PTBP3,PNN,CWF19L1,COA5,DSN1,DYNLL1,BRD8,NIF3L1,CCAR1,MAP2K7,CHAF1A,CENPJ,KATNA1,C14orf93,DPH7,XRCC1,SSBP1,CBX8,TRA2A,NSMCE4A,DPH5,ATP5PF,MAPKAPK5,RPS13,POLR3F,HINFP,RUVBL2,CYTH2,C8orf76,RCC2,WDR74,B9D2,IRF2BP1,WBP1,RAD17,CISD2,NOL8,TRIT1,PDCL,IMMP1L,TIMM21,SRRT,RPS17,CHEK2,PSMD6,MPHOSPH10,CFDP1,RBM39,EDC3,C15orf61,TAF9B,TADA1,TATDN3,MRPS26,ACOT13,UBE2I,GPANK1,CCT3,ZCCHC8,IMP3,PYGO2,NRF1,TMEM44,ITFG2,GXYLT1,FAM210A,GADD45GIP1,ESF1,IQCB1,COQ5,KAT8,ZSWIM7,PDS5A,CCNC,EIF3F,POLE3,KCTD6,ERH,RP11-523H20.5,IGBP1,USP39,ARV1,DDX39A,PPP1CC,NDUFAF6,ZNF77,BRIP1,HAUS8,SAMD10,LMNB1,RPRD1A,GPATCH2,NOL10,BANF1,ZNF74,HJURP,TMEM9,EME1,FRA10AC1,CAAP1,PRKRA,CKAP2,LIN37,BCLAF1,ZFP69,PYCR2,NUP42,BIRC5,PHKG2,NARF,PMF1,SARS2,PTGES3,BUD31,LARP7,ZC3HC1,CWC22,SS18L2,COPS5,C2orf42,SENP3,DCAF16,ZC3H4,FAM89B,TTK,MED31,POLR2I,CDCA4,PA2G4,TM2D3,KEAP1,OSGEPL1,CRLS1,OLA1,SPPL3,URI1,FAM76B,ANAPC7,GTPBP3,CCDC43,LSM4,RBMX,RBM4B,SNRPB,VPS29,MRPS31,BEND5,C21orf58,UFD1,RBM14,WDSUB1,NCOA5,ORC4,TEFM,SURF6,ATP5MJ,SAMD1,AAAS,PAICS,RNASEH2B,PRIMPOL,UBL5,RPS8,RPS11,WDHD1,TMEM50A,ODC1,HMGB2,KIF14,DYRK1B,PSMA4,GGPS1,KIF20B,HAUS5,ELOC,MTRF1,RSBN1L,REC8,UBXN1,DNAJC7,THYN1,LIAS,CTDSPL2,PRAF2,TSFM,MCM8,SLC25A17,LIN52,CDAN1,SMC6,COIL,GTF2A2,FAM216A,TRAIP,HTRA2,AUP1,ATAD5,PHIP,C12orf76,SF3B4,FAM228B,USP21,GSK3A,TIGD1,DNA2,GPS2,RPL36A,COA8,NCBP3,NOL12,SUPT3H,TTC13,PSMA2,HMGN1,TTC32,HP1BP3,ABHD3,SS18,TMEM230,RPS24,RMND5A,CSNK2A1,CBR4,ZNF18,NKRF,TIMM29,TMA7,BAG6,TEX10,EMC9,PAM16,KIFC1,TGIF1,SOX12,SETD4,CNOT2,TOP2A,EIF3E,TPRKB,CPSF3,KLHDC3,BLMH,TSNAX,AARSD1,DUSP28,PUM2,ANP32A,CEP162,RNASEH2C,BCDIN3D,TOMM5,TMEM11,RAD18,ZCCHC7,TYMS,ZNF84,ZCRB1,THOC5,ATP5MC2,TUBD1,MED10,ISYNA1,PDCD6,WDR33,RNF5,C17orf80,NEDD1,TRA2B,PIAS2,CRIPT,TIPIN,NAE1,LRRC40,DXO,HSPB11,PDCD7,CCDC112,LIG1,NELFA,PRPF4B,LIN7C,CCDC57,TRAPPC2,SNRPB2,TRMT10A,MRFAP1L1 | | Exist in public source | | NA |
| lncRNA targets the promoter region and positively regulates the gene expression. |
| lncRNA targets the promoter region and negatively regulates the gene expression. |
| lncRNA targets the 3'UTR region and negatively regulates the mRNA. |
| Only predicted by lncTar | | UBC,PCYT1A,RNH1,CAPN1,HSPG2,GBA,MVP,BECN1,PIEZO1,DYNC1LI2,ETFDH,MAN2B2,PGAP6,TBC1D9B,ATP6V0D1,EHBP1L1,NOMO2,LRP10 | | Exist in public source | | NA |
| lncRNA targets the skipped exon region. | | -lncRNA and exonskipping events are positively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | ORF mutation | | ENSG00000267249 | ENST00000585877 | exon_skip_386274 | chr3:108049618-108049651 | -3.48 | -0.1513 | CD47 | ENST00000361309 | In-frame |
| -lncRNA and exonskipping events are negatively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | LOF | | ENSG00000267249 | ENST00000585877 | exon_skip_382458 | chr3:38131595-38131638 | -8.78 | -0.2311 | ACAA1 | ENST00000333167 | Frame-shift | | ENSG00000267249 | ENST00000585877 | exon_skip_153767 | chr17:48057031-48057121 | -10.13 | -0.1351 | NFE2L1 | ENST00000362042 | In-frame | | ENSG00000267249 | ENST00000585877 | exon_skip_326917 | chr2:74532618-74532714 | -11.24 | -0.1678 | HTRA2 | ENST00000258080 | In-frame | | ENSG00000267249 | ENST00000585877 | exon_skip_442657 | chr5:74730259-74730398 | -12.78 | -0.1141 | GFM2 | ENST00000296805,ENST00000509430 | Frame-shift | | ENSG00000267249 | ENST00000585877 | exon_skip_75223 | chr11:72012400-72012442 | -8.41 | -0.2900 | NUMA1 | ENST00000393695 | In-frame |
| lncRNA targets by miRNA. |
| LncRNA Ensembl ID | miRNA ID | LncRNA ENST ID | Binding site in lncRNA | Score | Energy | Align Len | Public source | | ENSG00000267249 | hsa-mir-22 | ENST00000585877 | chr18:12670622-12670699 | 172.00 | -73.39 | 78 | NA | | ENSG00000267249 | hsa-mir-22 | ENST00000585877 | chr18:12670970-12671061 | 172.00 | -64.92 | 83 | NA | | ENSG00000267249 | hsa-mir-22 | ENST00000585877 | chr18:12670760-12670858 | 160.00 | -94.47 | 98 | NA |
| RNA A-to-I editing events in lncRNA. |
| LncRNAediting ID | LncRNA Ensembl ID | Chromosome | Editing Position | Strand | Gene Type | Gene Name | Transcript ID | Transcript Type | Transcript Name |
| Edited-associated DElncRNAs in cancer. |
| LncRNA Ensembl ID | LncRNA Index | Cancer Type | Chr_Postion_Strand | AVE1 | AVE2 | log2FC | W-value | P-value | Adjc.p-value | Change |
| Correlation between RNA A-to-I editing events's frequecy and lncRNA expression. |
| LncRNA Ensembl ID | LncRNA Index | Correlation | P-value | Adjc.p-value |
| Cis-expression quantitative trait loci(cis-eQTL) of lncRNA. |
| LncRNA Ensembl ID | LncRNA Name | SNP info | Number of Positive corelated Cancer | Positive corelated Cancer | Number of Negative corelated Cancer | Negative corelated Cancer |
| lncRNA regulates differentially expressed genes by function as enhancer. |
| LncRNA Ensembl ID | PC Gene ID | PC Gene Name | Positive correlated cancers | Cancer with PC gene up-regulation | Cancer with PC gene down-regulation |
| LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region. |
| LncRNA Ensembl ID | LncRNA ENST ID | PC Gene Name | PC Gene ID | PC ENST ID | dG | nDG | Cancer with PC gene up-regulation | Cancer with PC gene Down-regulation |
| lncRNA regulates mRNA by competing the miRNA binding site with mRNA. |
| LncRNA Ensembl ID | lncRNA-miRNA-mRNA | Cancer Types | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,WDR33 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,COIL | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,SFPQ | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,SF3B4 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,NAA16 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,CPSF6 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,ERCC3 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,SRSF6 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,WDR75 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,NAB1 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,ING5 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,CLK2 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,CAD | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,KHDC4 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,MBTD1 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,TIA1 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,DPF2 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,EEF1AKMT2 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,WDCP | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,RBMX | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,PMS1 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,FBXO46 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,CELF1 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,TTF1 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,CPSF7 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,SUMO2 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,HNRNPUL2 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,RBM14 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,FNBP4 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,NUP160 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,SRSF1 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,VIRMA | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,BUD13 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,BRD9 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,GTF3C2 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,MTA1 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,ILF3 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,AMMECR1L | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,NKAPD1 | CHOL,LGG,ACC,DLBC,LIHC | | ENSG00000267249 | RP11-973H7.3,hsa-mir-22,FBXL12 | CHOL,LGG,ACC,DLBC,LIHC |
| ORFfinder result for the gencode.v22.lncRNA.transcript.fa. |
| lncRNA Ensembl ID | lncRNA ENST ID | length(AA) | start at transcript | end at transcript | | ENSG00000267249.1 | ENST00000585877.1 | 146 | 237 | 677 |
|
