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Center for Computational Systems Medicine
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lncRNA summary

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lncRNA structure and expression level

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lncRNA-Protein interaction

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lncRNA-DNA interaction

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lncRNA-RNA interaction

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Variants in lncRNA

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lncRNAs regulate the target genes through functioning as enhancers

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lncRNAs regulate the target genes through recruiting transcript factors

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lncRNAs regulate the alternative splicing events through interacting with splicing factor

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lncRNAs regulate mRNA through targeting the 3'-UTR region

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lncRNAs regulate mRNA by competing with miRNA

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lncRNA coding potential

lncRNA: ENSG00000267106

Summary for ZNF561-AS1

check button Gene summary

Gene informationEnsembl ID

ENSG00000267106

Gene symbol

ZNF561-AS1

Gene nameZNF561 antisense RNA 1 (head to head)
HGNC

27613

Entrez ID
Gene typeprocessed_transcript
SynonymsZNF561-AS1|19p13.2
UniProtAcc

K7EIQ3


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Structure and expression level for ZNF561-AS1

check buttonAS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure.
UCSC result

check buttonDifferentially expressed gene analysis between cancer and normal samples.
DEG result
Ensembl IDBase meanlog2FC(AD/control)lfcSEStatP-valueAdjc.p-valueDEG direction Cancer type
ENSG000002671064.950144e+021.238721e+002.668781e-014.641522e+003.460000e-062.490000e-05UPGBM
ENSG000002671063.158463e+021.160832e+002.806321e-014.136489e+003.530000e-057.582400e-04UPPCPG

check buttonCorrelation between lncRNAs and cancer stages.
LncRNA Ensembl IDCorrelationP-valueCancer TypeAdjc.p-value
ENSG00000267106-3.281926e-019.816087e-17KIRC5.168993e-16

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lncRNA-Protein interaction for ZNF561-AS1

lncrna_protein
check buttonlncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).
Epi result
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source
ENSG00000267106ENST00000585797ZNF561-AS1ENSG00000149929HIRIP317.5894.1258Q9BW71EpiPredict
ENSG00000267106ENST00000586943ZNF561-AS1ENSG00000198919DZIP357.9893.2937Q86Y13RBP,EpiPredict
ENSG00000267106ENST00000591932ZNF561-AS1ENSG00000149929HIRIP34.0491.9679Q9BW71EpiPredict

check buttonlncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).
TF result
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source
ENSG00000267106ENST00000587536ZNF561-AS1ENSG00000169740ZNF3230.3491.4375P17041TFNA
ENSG00000267106ENST00000587536ZNF561-AS1ENSG00000169981ZNF3522.9491.6842P13682TFNA
ENSG00000267106ENST00000587536ZNF561-AS1ENSG00000114126TFDP26.7393.8371Q14188TFNA
ENSG00000267106ENST00000587536ZNF561-AS1ENSG00000085274MYNN3.5392.0418Q9NPC7TFNA
ENSG00000267106ENST00000591932ZNF561-AS1ENSG00000085274MYNN3.1692.9841Q9NPC7TFNA
ENSG00000267106ENST00000591932ZNF561-AS1ENSG00000114126TFDP22.6993.0279Q14188TFNA
ENSG00000267106ENST00000585797ZNF561-AS1ENSG00000169981ZNF3524.1291.146P13682TFNA
ENSG00000267106ENST00000585797ZNF561-AS1ENSG00000114126TFDP26.4692.5939Q14188TFNA
ENSG00000267106ENST00000585797ZNF561-AS1ENSG00000085274MYNN3.2790.8345Q9NPC7TFNA

check buttonlncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).
RBP result
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source
ENSG00000267106ENST00000585797ZNF561-AS1ENSG00000150316CWC1519.4591.5394Q9P013RBPNA
ENSG00000267106ENST00000585797ZNF561-AS1ENSG00000204356NELFE14.7592.8586P18615RBPNA
ENSG00000267106ENST00000586943ZNF561-AS1ENSG00000198919DZIP357.9893.6139Q86Y13RBP,EpiPredict
ENSG00000267106ENST00000587536ZNF561-AS1ENSG00000150316CWC1520.6792.7319Q9P013RBPNA
ENSG00000267106ENST00000587536ZNF561-AS1ENSG00000204356NELFE15.3893.6929P18615RBPNA
ENSG00000267106ENST00000591932ZNF561-AS1ENSG00000150316CWC156.891.4241Q9P013RBPNA
ENSG00000267106ENST00000591932ZNF561-AS1ENSG00000204356NELFE4.4792.528P18615RBPNA

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lncRNA-DNA interaction for ZNF561-AS1

lncrna_DNA
check buttonlncRNA targets the enhancer region and positively regulates the gene expression.
Only predicted by TDF
FKBP8,KRCC1,ARL16,UXT,SLIRP,TCEA2,NDUFS3,CTF1,DBI,IFT22,C12orf57,IFT52,CENPX,PET100,DYNC2LI1,MCEE,WDR83OS,C1orf56,DYNC2I2,CACFD1,TMEM106C,TRUB2,HINT2,MRPL46,TIMM17B,MIEF2,PNKD,FAM120AOS,NDUFA11,PIGX,STK16,WDR5B,SMUG1,DTYMK,APTX,TRAPPC2L,FAM200A,HIRIP3,CCNQ,COMMD2,COMMD7,COA3,EIF3G,NDUFA3,RRP36,COG4,SVBP,MICOS13,FAM104B,NDUFB2,UQCR11,RNF167,GTF2H5,USE1,CYB5D2,SDF2,TMEM208,ERAL1,UQCC2,ERI3,VKORC1,LYRM4,MPLKIP,LYPLAL1,PSENEN,SSU72,ANAPC10,UROD,SNHG32,CBY1,ABHD14B,WDR83,TIMMDC1,ITGB3BP,DHPS,WASHC3,MRPS11,BABAM1,DERL2,YIPF2,COMT,C3orf62,YJU2,TMEM101,GCDH,C17orf97,NDUFA2,PARL,FDX2,C22orf39,FUZ,UBE2E1,MTLN,BTF3L4,GCAT,FAM229B,MRPL57,KIF9,C2orf76,PFDN5,LRTOMT,CCDC159,CCDC167,CZIB,ACOT8,MLF2,MPG,SPCS1,PDRG1,ELOF1,RPA3,COA6,SDHAF2,ANAPC11,CCDC24,SKP1,MRPS25,GABARAP,CCDC12,EIF3K,PTRHD1,FDXR,THOC7,COX7A2,RCHY1,MCRIP1,ABHD8,ISCA2,MRPL52,MMAB,SLC27A5,IFT57,NDUFB3,MRPL55,HMGCL,MED7,NDUFB8,COX6B1,SNRNP25,NDUFS8,FAM98C,NFU1,PNPLA4,NICN1,NEK11,IP6K2,CRYL1,SWI5,YWHAE,YIF1A,FAHD2B,C19orf53,PIGH,MRPL20,COX16,C20orf96,TCAIM,HSCB,ADPRM,MIX23,HPF1,ACYP2,LSM3,SURF1,NUBP2,DNAJC8,LCMT1,NUTF2,FIS1,GMDS,MRPL24,STYXL1,NECAB3,RPA2,UBL7,TMEM116,CHCHD2,NAA38,POLR3K,JTB,ANAPC13,TBCA,TCTA,TMEM251,CWC15,PPA2,IFT80,NELFE,METTL23,GLT8D1,C17orf75,P4HTM,STX8,TUSC2,MVB12A,ELP5,YIPF1,TMEM182,DZIP3,GATB,DNAJC19,CCDC125,MRPS23,PEX11G,TOMM22,SGF29,CETN3,PEX11A,COMMD1,MYNN,MRPL36,PSPN,SERP2,HEMK1,SMIM12,TMEM218,IFT20,TMEM199,PTOV1,DMAC1,PYURF,NDUFAF5,HIBCH,MFF,SLC41A3,HMBS,FRG1,KHDC1,TRIAP1,POP5,ORAI3,NTHL1,SOD1,CUEDC2,NSL1,SCAND1,COX14,DECR1,NDUFA6,DHRS1,HAGH,CCDC71,B9D1,PPCDC,PLXNB1,CERS5,TFDP2,ATPAF2,AKR7A2,AMT,CCDC51,AMZ2,TMEM187,SPAG7,TCEAL8,ATP5IF1,SPRYD4,C11orf1,MORN2,PYM1,ATP5F1E,PEF1,NUDC,TMEM17,MRPL34,WDR25,PSMA2,STMP1,CDPF1,MRPL47,MYL12B,MTIF3,NME5,PIGC,NPRL2,MRPL2,PCBD1,SNX17,VAMP8,HDAC11,TIMM9,HHLA3,LSM5,ALG5,UQCRH,COPS9,ZMAT5,ECI1,LRRC23,CREB3,NDUFB5,PPP1R7,ENDOV,DPY30,PPIE,SF3B6,FAM162A,ELP6,COX7B,SH3BGR,ALKBH7,GEMIN7,GEMIN6,CETN2,TMEM128,HEXIM2,SCRN2,ATRAID,GON7,SMDT1,PIGQ,SUMO1,LAMTOR1,RNF25,COX4I1,TMEM60,YAE1,COX7A2L,CENPS,GEMIN2,METTL6,CIAO2B,MOCS2,AAMDC,TMEM68,MRPL27,TRAPPC3,MYL6B,UQCR10,C19orf25,C3orf38,ABHD10,PSMB1,LIPT1,NDUFA1,ABHD14A,PDE6D,NUDCD2,LSM2,COA5,MICOS10,ERCC8,COQ9,SSBP1,ATP5PF,DPH5,FUNDC2,MRPL43,PHOSPHO2,ECHS1,NDUFAF1,BDH2,EIF3I,HEBP2,SMIM19,NDUFAF8,IMMP1L,HSD17B10,SSR2,TPRA1,SDSL,ATP5PB,PRDX5,BOLA3,NUDT16L1,CFDP1,DNAJC30,TATDN3,TXN2,ACOT13,IMP3,NME7,FHIT,NDUFA13,CHCHD5,C7orf50,NDUFAB1,GADD45GIP1,COQ5,ZSWIM7,SNF8,EIF6,SLC25A11,HSBP1,MPDU1,RP11-523H20.5,ARV1,HSD17B8,OSCP1,NDUFA4,BANF1,BCL7C,TMEM9,PDZD11,CINP,GSTZ1,HAX1,IFT27,ZNHIT1,MED28,PMF1,HACL1,ZC3HC1,EMC3,SS18L2,SWSAP1,SENP3,PTPMT1,RFXANK,ARL3,UBE2D4,MED31,OSGEPL1,G6PC3,IAH1,LSM4,IQCD,C1orf50,DTWD1,TMEM99,APOM,BEND5,ORC4,COX17,ATP5MJ,ATP6V1F,RABAC1,DCXR,GET3,PRIMPOL,UBL5,TXNDC17,GAMT,TTLL1,OCIAD2,GGPS1,NDUFB7,ING4,MRPS33,RHOC,THYN1,IFT46,TMEM107,LRRC29,FAM228B,WDR61,RWDD2B,FUNDC1,PEMT,COA8,PCBP4,THAP3,MTFR1L,CRYZL1,LYRM1,COMMD6,TMEM230,SPATA33,GSS,CBR4,TIMM29,EIF2D,TMA7,LMAN2,YBEY,TPRKB,SPATA24,RPS27L,NEDD8,SPAG16,BOLA1,TSR3,SMIM4,BCDIN3D,TMEM11,CRBN,NSMCE1,PIN1,COPS8,NDUFV3,DGCR6L,PIGU,REX1BD,CRIPT,MRPS14,TSPAN6,ECH1,EMC8,MRPL54,SNRPB2
Exist in public source
NA

check buttonlncRNA targets the promoter region and positively regulates the gene expression.
Only predicted by TDF
NDUFA2,NDUFA6,C22orf39,MRPL4,ITGB3BP,ALG5,LAMTOR2,APITD1,NSL1,ZNHIT3,PEMT,ATP6V1F,NUDC,G6PC3,PMF1,OSGEPL1,C20orf196,NDUFAF1,DHPS,PEX11G,KHDC1,PGPEP1,COX16,EMC4,CCDC125,C4orf27,CCDC167,NTPCR,METTL6,HHLA3,EIF2D,COMMD2,EID2B,UXT,OXLD1,FAM32A,MRPL52,METTL2A,COX7C,PARK7,SPATA24,CUEDC2,HEMK1,ANAPC10,ELOF1,EIF3G,TMEM9,C1orf56,LAMTOR1,WDR48,CCDC53,NICN1,PSMB6,PSMB1,RCHY1,ING4,THAP7,FAM185A,NSMCE1,C7orf50,MYNN,OCIAD1,FHIT,BEND5,CRYZL1,ATRAID,ECHS1,TATDN3,TPRA1,BDH2,MPLKIP,NFU1,ICT1,TIPRL,TOMM22,OSCP1,TIMM17B,THAP3,COX7B,MRPL27,TUSC2,RNF167,EMC8,LRTOMT,SSR2,TRIAP1,HINT2,LSM2,SCOC,COX14,C6orf203,C3orf62,RPS27L,BANF1,HSD17B8,NDUFB5,GAMT,C17orf75,RPSA,PRDX4,TIMM22,TACO1,NDUFA3,SSU72,C14orf2,NDUFAB1,APTX,HSCB,MANBAL,COX5B,AIG1,NENF,PSMA2,PPCDC,NT5M,ZSWIM7,CMC1,ATG10,ELAC1,SAT2,NDUFS5,C14orf142,C19orf25,MAGEF1,ECI1,CWC15,RPA2,PIGC,ATPIF1,FAM195B,COA6,GABARAP,RWDD2B,ABHD14B,OSTC,MRPS14,MRPS33,FUZ,UQCC2,PKIG,GTF2H5,HCFC1R1,GCDH,SYS1,DNAJC8,APOM,SLC25A35,PPA2,BABAM1,AMZ2,TIMM9,NIT2,SLC25A11,SLC25A38,DERL2,GADD45GIP1,SGF29,ARIH2OS,KRCC1,PIFO,C20orf96,MRPL47,NELFE,MED28,LHPP,UBL7,FKBP8,C11orf49,ZNHIT1
Exist in public source
NA

check buttonlncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for ZNF561-AS1

lncrna_RNA
check buttonlncRNA targets the 3'UTR region and negatively regulates the mRNA.
Only predicted by lncTar
WDR81,CYTH1,CIC,TDG,RIPOR1,SEC14L1,SON,BAZ2A,MNT,PPRC1,SLC36A1,ARID1A,M6PR,SH2B3,MYH9,ZEB2,GBF1,RELT,AKAP13,STRN,YPEL2,PRR12,SBNO2,MAP3K3,KHNYN,HECA,USP36,SMARCC2,UBR4,SBF1,ZZEF1,GNL3L,PI4KA,IQGAP1,EDC4,WNK1,PICALM,DHX38,CAMKK2,SSH1,CAD,DYRK2,RNF31,PIEZO1,MEF2D,PLEKHM2,SART3,NFKB1,STK40,STK17B,STK4,CEMIP2,WIPF1,GIT2,MAFK,SOAT1,TSPAN14,CELF1,PPP6R1,PPP1R9B,KMT2B,SRRM2,BCL9L,LUZP1,SRCAP,DDX3X,MTF1,KDM2A,TLN1,PHRF1,POLG,MARK2,KLF13,RAPGEF1
Exist in public source
NA

check buttonlncRNA targets the skipped exon region.
-lncRNA and exonskipping events are positively correlated.
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonORF mutation

-lncRNA and exonskipping events are negatively correlated.
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonLOF

check buttonlncRNA targets by miRNA.
LncRNA Ensembl IDmiRNA IDLncRNA ENST IDBinding site in lncRNAScoreEnergyAlign LenPublic source

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Variants for ZNF561-AS1

check buttonRNA A-to-I editing events in lncRNA.
LncRNAediting IDLncRNA Ensembl IDChromosomeEditing PositionStrandGene TypeGene NameTranscript IDTranscript TypeTranscript Name

check buttonEdited-associated DElncRNAs in cancer.
LncRNA Ensembl IDLncRNA IndexCancer TypeChr_Postion_StrandAVE1AVE2log2FCW-valueP-valueAdjc.p-valueChange

check buttonCorrelation between RNA A-to-I editing events's frequecy and lncRNA expression.
LncRNA Ensembl IDLncRNA IndexCorrelationP-valueAdjc.p-value

check buttonCis-expression quantitative trait loci(cis-eQTL) of lncRNA.
LncRNA Ensembl IDLncRNA NameSNP infoNumber of Positive corelated CancerPositive corelated CancerNumber of Negative corelated CancerNegative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncrna_enhancer
check buttonlncRNA regulates differentially expressed genes by function as enhancer.
LncRNA Ensembl IDPC Gene IDPC Gene NamePositive correlated cancersCancer with PC gene up-regulationCancer with PC gene down-regulation
ENSG00000267106ENSG00000104325DECR1BLCA,DLBC,GBM,KIRC,THCAGBM
ENSG00000267106ENSG00000159239RP11-523H20.5BLCA,KICH,KIRP,MESO,PCPGPCPG
ENSG00000267106ENSG00000177352CCDC71BLCA,DLBC,GBM,KICH,KIRC,KIRP,LUAD,LUSCGBM
ENSG00000267106ENSG00000198258UBL5BLCA,BRCA,DLBC,GBM,KIRC,KIRP,LGG,LUAD,LUSC,MESO,OV,PCPG,PRAD,THCA,THYM,UCEC,UCSGBM
ENSG00000267106ENSG00000125611CHCHD5BRCA,DLBC,GBM,KICH,KIRC,LGG,LUAD,MESO,PCPG,PRAD,THCA,THYMGBM
ENSG00000267106ENSG00000127952STYXL1BRCA,DLBC,GBM,KIRP,LGG,THCA,THYMGBM
ENSG00000267106ENSG00000135211TMEM60BRCA,GBM,LGG,THCA,UCECGBM
ENSG00000267106ENSG00000138085ATRAIDBRCA,GBM,KICH,KIRC,KIRP,LGG,LUAD,LUSC,OV,PRAD,THCA,THYMGBM
ENSG00000267106ENSG00000175938ORAI3BRCA,DLBC,GBM,OV,PRAD,THCA,THYMGBM
ENSG00000267106ENSG00000064490RFXANKDLBC,GBM,LGG,MESO,THCA,THYMGBM
ENSG00000267106ENSG00000072506HSD17B10DLBC,GBM,KICH,KIRC,KIRP,LGG,MESO,PRAD,THCA,THYM,UCSGBM
ENSG00000267106ENSG00000099385BCL7CDLBC,GBM,KICH,KIRP,LUAD,MESO,THYMGBM
ENSG00000267106ENSG00000106028SSBP1DLBC,GBM,KIRP,LGG,THCAGBM
ENSG00000267106ENSG00000106399RPA3DLBC,GBM,KICH,KIRP,LGGGBM
ENSG00000267106ENSG00000106400ZNHIT1DLBC,GBM,KIRP,THCA,THYMGBM
ENSG00000267106ENSG00000106588PSMA2DLBC,GBM,KICH,LGG,THCA,THYMGBM
ENSG00000267106ENSG00000118640VAMP8DLBC,GBM,KICH,KIRP,LUAD,PRAD,THYMGBM
ENSG00000267106ENSG00000126756UXTDLBC,GBM,LUAD,LUSC,MESO,PRAD,THCAGBM
ENSG00000267106ENSG00000130005GAMTDLBC,GBM,KICH,LGG,LUAD,MESO,PCPG,PRAD,THCA,THYMPCPG
ENSG00000267106ENSG00000139410SDSLDLBC,GBM,KICH,KIRC,LGG,MESO,PRAD,THCAGBM
ENSG00000267106ENSG00000141971MVB12ADLBC,GBM,KICH,LGG,MESO,PRAD,THCA,THYM,UCSGBM
ENSG00000267106ENSG00000150433TMEM218DLBC,GBM,KICH,LUAD,LUSCGBM
ENSG00000267106ENSG00000155366RHOCDLBC,GBM,KICH,THCA,THYMGBM
ENSG00000267106ENSG00000155368DBIDLBC,GBM,KICH,LGG,PRADGBM
ENSG00000267106ENSG00000167272POP5DLBC,GBM,KICH,KIRP,LGG,PCPG,PRAD,THCAGBM
ENSG00000267106ENSG00000168393DTYMKDLBC,GBM,KICH,LUAD,PRAD,THCAGBM
ENSG00000267106ENSG00000170855TRIAP1DLBC,GBM,KICH,LGG,LUAD,LUSC,THCAGBM
ENSG00000267106ENSG00000171703TCEA2DLBC,KIRP,MESO,PCPG,THCA,THYMPCPG
ENSG00000267106ENSG00000174851YIF1ADLBC,GBM,KIRC,LGG,THCAGBM
ENSG00000267106ENSG00000175334BANF1DLBC,GBM,KIRC,KIRP,LGG,THCA,THYMGBM
ENSG00000267106ENSG00000185088RPS27LDLBC,GBM,KIRP,LGG,PRAD,THCA,THYMGBM
ENSG00000267106ENSG00000188243COMMD6DLBC,GBM,KICH,KIRP,LUAD,MESOGBM
ENSG00000267106ENSG00000196465MYL6BDLBC,GBM,KICH,KIRP,LUSC,MESO,OV,PCPG,THCAPCPG
ENSG00000267106ENSG00000198937CCDC167DLBC,GBM,KICH,THCA,UCSGBM
ENSG00000267106ENSG00000000003TSPAN6GBM,KICH,KIRC,LUAD,UCECGBM
ENSG00000267106ENSG00000051620HEBP2GBM,KICH,THCA,THYM,UCSGBM
ENSG00000267106ENSG00000084623EIF3IGBM,KICH,LUAD,THCA,THYMGBM
ENSG00000267106ENSG00000100209HSCBGBM,KICH,KIRP,LAML,LGG,LUAD,LUSC,PCPG,PRAD,THCA,THYMGBM
ENSG00000267106ENSG00000111678C12orf57GBM,KICH,LUAD,MESO,PRAD,THCAGBM
ENSG00000267106ENSG00000117543DPH5GBM,KICH,LAML,LUAD,LUSC,UCECGBM
ENSG00000267106ENSG00000120509PDZD11GBM,KIRC,LGG,LUAD,LUSC,PRAD,THCA,THYMGBM
ENSG00000267106ENSG00000120697ALG5GBM,KICH,KIRC,LGG,LUAD,LUSC,PRAD,THCAGBM
ENSG00000267106ENSG00000123349PFDN5GBM,KICH,LUAD,LUSC,THCA,THYMGBM
ENSG00000267106ENSG00000129235TXNDC17GBM,KICH,KIRC,KIRP,LUAD,PRADGBM
ENSG00000267106ENSG00000134291TMEM106CGBM,KIRC,LUAD,LUSC,THCAGBM
ENSG00000267106ENSG00000135845PIGCGBM,KICH,LUAD,LUSC,MESOGBM
ENSG00000267106ENSG00000142856ITGB3BPGBM,KICH,LAML,LUAD,UCECGBM
ENSG00000267106ENSG00000143156NME7GBM,KICH,LAML,OV,PCPGPCPG
ENSG00000267106ENSG00000144034TPRKBGBM,KICH,KIRP,LGG,LUAD,THCA,UCECGBM
ENSG00000267106ENSG00000144199FAHD2BGBM,KICH,KIRC,MESO,PCPG,SARCPCPG
ENSG00000267106ENSG00000145337PYURFGBM,KIRC,LGG,LUAD,LUSC,MESO,THCA,THYMGBM
ENSG00000267106ENSG00000147400CETN2GBM,KICH,KIRC,KIRP,MESO,THCAGBM
ENSG00000267106ENSG00000151778SERP2GBM,KICH,KIRP,OV,PCPG,THYMPCPG
ENSG00000267106ENSG00000153485TMEM251GBM,KICH,LGG,LUAD,PRADGBM
ENSG00000267106ENSG00000160124MIX23GBM,KIRP,LAML,LGG,THCAGBM
ENSG00000267106ENSG00000164306PRIMPOLGBM,KICH,LAML,LGG,LUAD,LUSC,SARCGBM
ENSG00000267106ENSG00000165775FUNDC2GBM,LGG,LUAD,LUSC,MESO,PRADGBM
ENSG00000267106ENSG00000167920TMEM99GBM,KICH,LGG,MESO,OV,PRAD,THCA,THYMGBM
ENSG00000267106ENSG00000168273SMIM4GBM,KICH,KIRC,KIRP,MESO,THCAGBM
ENSG00000267106ENSG00000169689CENPXGBM,KICH,LUAD,PRAD,THCAGBM
ENSG00000267106ENSG00000170142UBE2E1GBM,KICH,LAML,LUAD,LUSCGBM
ENSG00000267106ENSG00000170270GON7GBM,KICH,KIRC,LGG,LUAD,PRADGBM
ENSG00000267106ENSG00000171421MRPL36GBM,KICH,LGG,THCA,THYMGBM
ENSG00000267106ENSG00000172086KRCC1GBM,KICH,LAML,LUAD,LUSCGBM
ENSG00000267106ENSG00000179021C3orf38GBM,KICH,LGG,LUAD,LUSC,UCSGBM
ENSG00000267106ENSG00000183323CCDC125GBM,KICH,LAML,MESO,UCSGBM
ENSG00000267106ENSG00000204387SNHG32GBM,KICH,LAML,THCA,THYMGBM
ENSG00000267106ENSG00000204444APOMGBM,LGG,OV,THCA,THYMGBM
ENSG00000267106ENSG00000241127YAE1GBM,KICH,LAML,LGG,OV,THCA,UCECGBM
ENSG00000267106ENSG00000243317STMP1GBM,KICH,KIRC,KIRP,UCECGBM
ENSG00000267106ENSG00000256269HMBSGBM,KIRC,KIRP,LGG,PRAD,THCAGBM
ENSG00000267106ENSG00000145247OCIAD2KICH,KIRP,LAML,LUAD,PCPGPCPG
ENSG00000267106ENSG00000163517HDAC11KIRC,KIRP,PCPG,SARC,THCA,THYMPCPG

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lncRNAs regulate the target genes through recruiting transcript factors

lncrna_TF
check buttonLncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types
ENSG00000267106ENSG00000169740ZNF32ENSG00000131495NDUFA25GBM,KIRC,LGG,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000116586LAMTOR26GBM,KICH,LUAD,MESO,PRAD,THCA
ENSG00000267106ENSG00000169740ZNF32ENSG00000175279CENPS5GBM,KICH,MESO,PRAD,THCA
ENSG00000267106ENSG00000169740ZNF32ENSG00000117697NSL15GBM,KICH,LUAD,LUSC,OV
ENSG00000267106ENSG00000169740ZNF32ENSG00000160783PMF15GBM,KICH,LGG,MESO,THCA
ENSG00000267106ENSG00000169740ZNF32ENSG00000171984SHLD18GBM,KICH,KIRC,LGG,LUAD,OV,PRAD,THCA
ENSG00000267106ENSG00000169740ZNF32ENSG00000104883PEX11G5KICH,KIRC,MESO,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000056050HPF16GBM,KICH,LGG,LUAD,LUSC,MESO
ENSG00000267106ENSG00000169740ZNF32ENSG00000126756UXT6GBM,LUAD,LUSC,MESO,PRAD,THCA
ENSG00000267106ENSG00000169740ZNF32ENSG00000204237OXLD16GBM,KICH,LGG,MESO,PRAD,THCA
ENSG00000267106ENSG00000169740ZNF32ENSG00000105058FAM32A5GBM,KICH,LGG,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000172590MRPL525GBM,KICH,LUAD,PRAD,THCA
ENSG00000267106ENSG00000169740ZNF32ENSG00000116288PARK76GBM,KICH,LUAD,PRAD,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000116857TMEM95GBM,KICH,LUAD,LUSC,MESO
ENSG00000267106ENSG00000169740ZNF32ENSG00000142507PSMB65GBM,KICH,PRAD,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000111653ING45GBM,KICH,LUSC,MESO,OV
ENSG00000267106ENSG00000169740ZNF32ENSG00000138085ATRAID10BRCA,GBM,KICH,KIRC,LUAD,LUSC,OV,PRAD,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000203705TATDN35GBM,KICH,KIRC,LUAD,LUSC
ENSG00000267106ENSG00000169740ZNF32ENSG00000169599NFU16GBM,KICH,LGG,LUAD,LUSC,THCA
ENSG00000267106ENSG00000169740ZNF32ENSG00000167862MRPL586GBM,KICH,KIRC,LGG,LUAD,THCA
ENSG00000267106ENSG00000169740ZNF32ENSG00000100216TOMM225GBM,KIRC,LUSC,PRAD,THCA
ENSG00000267106ENSG00000169740ZNF32ENSG00000041988THAP36GBM,KICH,LUAD,MESO,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000131174COX7B5GBM,LUAD,MESO,PRAD,THCA
ENSG00000267106ENSG00000169740ZNF32ENSG00000108826MRPL277GBM,KICH,LGG,LUAD,PRAD,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000114383TUSC25GBM,KIRC,LUAD,PRAD,THCA
ENSG00000267106ENSG00000169740ZNF32ENSG00000163479SSR25KICH,LGG,LUAD,LUSC,MESO
ENSG00000267106ENSG00000169740ZNF32ENSG00000204392LSM26GBM,KICH,LUAD,LUSC,OV,THCA
ENSG00000267106ENSG00000169740ZNF32ENSG00000178449COX145GBM,KIRC,LUAD,PRAD,THCA
ENSG00000267106ENSG00000169740ZNF32ENSG00000175334BANF15GBM,KIRC,LGG,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000108666C17orf755GBM,KICH,LUAD,LUSC,OV
ENSG00000267106ENSG00000169740ZNF32ENSG00000100209HSCB8GBM,KICH,LGG,LUAD,LUSC,PRAD,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000101363MANBAL8GBM,KIRC,LGG,LUAD,LUSC,MESO,PRAD,THCA
ENSG00000267106ENSG00000169740ZNF32ENSG00000135940COX5B5GBM,KIRC,LUAD,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000117691NENF5GBM,KICH,LUAD,MESO,THCA
ENSG00000267106ENSG00000169740ZNF32ENSG00000106588PSMA25GBM,KICH,LGG,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000138621PPCDC5GBM,MESO,PRAD,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000214941ZSWIM75GBM,KICH,LGG,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000141642ELAC17GBM,KICH,LGG,LUAD,LUSC,MESO,UCEC
ENSG00000267106ENSG00000169740ZNF32ENSG00000141504SAT27GBM,KICH,LGG,MESO,PRAD,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000119559C19orf255GBM,KIRC,LGG,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000167969ECI15GBM,KIRC,MESO,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000150316CWC155GBM,LGG,LUAD,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000135845PIGC5GBM,KICH,LUAD,LUSC,MESO
ENSG00000267106ENSG00000169740ZNF32ENSG00000130770ATP5IF16GBM,KICH,KIRC,PRAD,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000168275COA65GBM,KICH,KIRC,PRAD,THCA
ENSG00000267106ENSG00000169740ZNF32ENSG00000114779ABHD14B5KICH,MESO,PRAD,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000120333MRPS145GBM,KICH,LUAD,LUSC,MESO
ENSG00000267106ENSG00000169740ZNF32ENSG00000137288UQCC27GBM,KICH,KIRC,LGG,OV,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000100575TIMM95GBM,LUAD,LUSC,THCA,THYM
ENSG00000267106ENSG00000169740ZNF32ENSG00000221883ARIH2OS5GBM,KICH,LGG,PRAD,THCA
ENSG00000267106ENSG00000169740ZNF32ENSG00000204356NELFE5GBM,KICH,LUAD,OV,THCA

check buttonLncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

lncrna_AS
check buttonLncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type

check buttonLncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncrna_mRNA
check buttonlncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.
LncRNA Ensembl IDLncRNA ENST IDPC Gene NamePC Gene IDPC ENST IDdGnDGCancer with PC gene up-regulationCancer with PC gene Down-regulation
ENSG00000267106ENST00000591932MARK2ENSG00000072518ENST00000509502-0.1423350-GBM
ENSG00000267106ENST00000591932MARK2ENSG00000072518ENST00000408948-0.9586439-GBM
ENSG00000267106ENST00000588765MARK2ENSG00000072518ENST00000508192-0.1211100-GBM
ENSG00000267106ENST00000588765MARK2ENSG00000072518ENST00000361128-0.10841-GBM
ENSG00000267106ENST00000588765MARK2ENSG00000072518ENST00000350490-0.11191-GBM
ENSG00000267106ENST00000588765MARK2ENSG00000072518ENST00000502399-0.111913-GBM
ENSG00000267106ENST00000588765MARK2ENSG00000072518ENST00000509502-0.32811-GBM
ENSG00000267106ENST00000588765MARK2ENSG00000072518ENST00000513765-0.10021-GBM
ENSG00000267106ENST00000588765MARK2ENSG00000072518ENST00000408948-0.913370-GBM
ENSG00000267106ENST00000586614MARK2ENSG00000072518ENST00000402010-0.10381-GBM
ENSG00000267106ENST00000586614MARK2ENSG00000072518ENST00000377810-0.10381-GBM
ENSG00000267106ENST00000586614MARK2ENSG00000072518ENST00000508192-0.12891-GBM
ENSG00000267106ENST00000586614MARK2ENSG00000072518ENST00000509502-0.27411-GBM
ENSG00000267106ENST00000586614MARK2ENSG00000072518ENST00000408948-0.913368-GBM
ENSG00000267106ENST00000586614SBF1ENSG00000100241ENST00000380817-0.10401-GBM
ENSG00000267106ENST00000585797MARK2ENSG00000072518ENST00000508192-0.12866-GBM
ENSG00000267106ENST00000585797MARK2ENSG00000072518ENST00000509502-0.27411-GBM
ENSG00000267106ENST00000585797MARK2ENSG00000072518ENST00000408948-1.67401385-GBM
ENSG00000267106ENST00000587536MARK2ENSG00000072518ENST00000508192-0.129471-GBM
ENSG00000267106ENST00000587536MARK2ENSG00000072518ENST00000361128-0.10231-GBM
ENSG00000267106ENST00000587536MARK2ENSG00000072518ENST00000350490-0.10231-GBM
ENSG00000267106ENST00000587536MARK2ENSG00000072518ENST00000502399-0.10231-GBM
ENSG00000267106ENST00000587536MARK2ENSG00000072518ENST00000509502-0.32811-GBM
ENSG00000267106ENST00000587536MARK2ENSG00000072518ENST00000513765-0.10231-GBM
ENSG00000267106ENST00000587536MARK2ENSG00000072518ENST00000408948-1.67401450-GBM
ENSG00000267106ENST00000591056MARK2ENSG00000072518ENST00000508192-0.12861-GBM
ENSG00000267106ENST00000591056MARK2ENSG00000072518ENST00000361128-0.109269-GBM
ENSG00000267106ENST00000591056MARK2ENSG00000072518ENST00000502399-0.116769-GBM
ENSG00000267106ENST00000591056MARK2ENSG00000072518ENST00000509502-0.32811-GBM
ENSG00000267106ENST00000591056MARK2ENSG00000072518ENST00000408948-0.913354-GBM
ENSG00000267106ENST00000592851MARK2ENSG00000072518ENST00000508192-0.129441-GBM
ENSG00000267106ENST00000592851MARK2ENSG00000072518ENST00000361128-0.100441-GBM
ENSG00000267106ENST00000592851MARK2ENSG00000072518ENST00000502399-0.100441-GBM
ENSG00000267106ENST00000592851MARK2ENSG00000072518ENST00000509502-0.16241-GBM
ENSG00000267106ENST00000592851MARK2ENSG00000072518ENST00000408948-0.5264622-GBM
ENSG00000267106ENST00000616951MARK2ENSG00000072518ENST00000402010-0.11261-GBM
ENSG00000267106ENST00000616951MARK2ENSG00000072518ENST00000377810-0.11261-GBM
ENSG00000267106ENST00000616951MARK2ENSG00000072518ENST00000508192-0.129435-GBM
ENSG00000267106ENST00000616951MARK2ENSG00000072518ENST00000361128-0.126235-GBM
ENSG00000267106ENST00000616951MARK2ENSG00000072518ENST00000350490-0.126235-GBM
ENSG00000267106ENST00000616951MARK2ENSG00000072518ENST00000502399-0.126235-GBM
ENSG00000267106ENST00000616951MARK2ENSG00000072518ENST00000509502-0.15391-GBM
ENSG00000267106ENST00000616951MARK2ENSG00000072518ENST00000513765-0.126235-GBM
ENSG00000267106ENST00000616951MARK2ENSG00000072518ENST00000408948-0.913320-GBM
ENSG00000267106ENST00000616951SBF1ENSG00000100241ENST00000380817-0.11611-GBM
ENSG00000267106ENST00000586943MARK2ENSG00000072518ENST00000508192-0.12271761-GBM
ENSG00000267106ENST00000586943MARK2ENSG00000072518ENST00000509502-0.1617474-GBM
ENSG00000267106ENST00000586943MARK2ENSG00000072518ENST00000408948-0.9273647-GBM
ENSG00000267106ENST00000591932STRNENSG00000115808ENST00000379213-0.1492349-GBM
ENSG00000267106ENST00000588765SBF1ENSG00000100241ENST00000348911-0.10165-GBM
ENSG00000267106ENST00000588765SBF1ENSG00000100241ENST00000418590-0.10165-GBM
ENSG00000267106ENST00000588765GBF1ENSG00000107862ENST00000369983-0.11631-GBM
ENSG00000267106ENST00000588765STRNENSG00000115808ENST00000379213-0.165111-GBM
ENSG00000267106ENST00000586614SBF1ENSG00000100241ENST00000348911-0.11881-GBM
ENSG00000267106ENST00000586614SBF1ENSG00000100241ENST00000418590-0.11881-GBM
ENSG00000267106ENST00000586614GBF1ENSG00000107862ENST00000369983-0.12411-GBM
ENSG00000267106ENST00000586614STRNENSG00000115808ENST00000379213-0.16519-GBM
ENSG00000267106ENST00000586614UBR4ENSG00000127481ENST00000375225-0.10151-GBM
ENSG00000267106ENST00000586614UBR4ENSG00000127481ENST00000375224-0.10151-GBM
ENSG00000267106ENST00000585797SBF1ENSG00000100241ENST00000348911-0.16611-GBM
ENSG00000267106ENST00000585797SBF1ENSG00000100241ENST00000418590-0.16611-GBM
ENSG00000267106ENST00000585797STRNENSG00000115808ENST00000379213-0.17071479-GBM
ENSG00000267106ENST00000585797UBR4ENSG00000127481ENST00000375254-0.11941-GBM
ENSG00000267106ENST00000585797UBR4ENSG00000127481ENST00000375225-0.11941-GBM
ENSG00000267106ENST00000585797UBR4ENSG00000127481ENST00000375224-0.11941-GBM
ENSG00000267106ENST00000587536SBF1ENSG00000100241ENST00000348911-0.10821-GBM
ENSG00000267106ENST00000587536SBF1ENSG00000100241ENST00000418590-0.10821-GBM
ENSG00000267106ENST00000587536STRNENSG00000115808ENST00000379213-0.17071544-GBM
ENSG00000267106ENST00000591056STRNENSG00000115808ENST00000379213-0.22641-GBM
ENSG00000267106ENST00000591056UBR4ENSG00000127481ENST00000375254-0.10181-GBM
ENSG00000267106ENST00000591056UBR4ENSG00000127481ENST00000375225-0.10181-GBM
ENSG00000267106ENST00000591056UBR4ENSG00000127481ENST00000375224-0.10181-GBM
ENSG00000267106ENST00000592851STRNENSG00000115808ENST00000379213-0.2075150-GBM
ENSG00000267106ENST00000592851UBR4ENSG00000127481ENST00000375218-0.2945360-GBM
ENSG00000267106ENST00000616951SBF1ENSG00000100241ENST00000348911-0.11101-GBM
ENSG00000267106ENST00000616951SBF1ENSG00000100241ENST00000418590-0.11101-GBM
ENSG00000267106ENST00000616951PPP1R9BENSG00000108819ENST00000612501-0.10301-GBM
ENSG00000267106ENST00000616951STRNENSG00000115808ENST00000379213-0.2075144-GBM
ENSG00000267106ENST00000616951UBR4ENSG00000127481ENST00000375218-0.12531-GBM
ENSG00000267106ENST00000586943STRNENSG00000115808ENST00000379213-0.23071119-GBM
ENSG00000267106ENST00000586943UBR4ENSG00000127481ENST00000375218-0.11521632-GBM
ENSG00000267106ENST00000591932CAMKK2ENSG00000110931ENST00000412367-0.111477-GBM
ENSG00000267106ENST00000591932CAMKK2ENSG00000110931ENST00000402834-0.1061140-GBM
ENSG00000267106ENST00000591932SEC14L1ENSG00000129657ENST00000589202-1.2820603-PCPG
ENSG00000267106ENST00000588765PI4KAENSG00000241973ENST00000399213-0.16281-GBM
ENSG00000267106ENST00000588765CAMKK2ENSG00000110931ENST00000412367-0.16841-GBM
ENSG00000267106ENST00000588765CAMKK2ENSG00000110931ENST00000404169-0.12331-GBM
ENSG00000267106ENST00000588765CAMKK2ENSG00000110931ENST00000402834-0.12331-GBM
ENSG00000267106ENST00000588765YPEL2ENSG00000175155ENST00000585166-0.15861-GBM
ENSG00000267106ENST00000588765SEC14L1ENSG00000129657ENST00000585618-0.28511-PCPG
ENSG00000267106ENST00000588765SEC14L1ENSG00000129657ENST00000591437-0.28511-PCPG
ENSG00000267106ENST00000588765SEC14L1ENSG00000129657ENST00000431431-0.28511-PCPG
ENSG00000267106ENST00000588765SEC14L1ENSG00000129657ENST00000589202-0.4940120-PCPG
ENSG00000267106ENST00000588765SEC14L1ENSG00000129657ENST00000588488-0.28511-PCPG
ENSG00000267106ENST00000586614PI4KAENSG00000241973ENST00000255882-0.10111-GBM
ENSG00000267106ENST00000586614PI4KAENSG00000241973ENST00000399213-0.10111-GBM
ENSG00000267106ENST00000586614CAMKK2ENSG00000110931ENST00000412367-0.18961-GBM
ENSG00000267106ENST00000586614CAMKK2ENSG00000110931ENST00000404169-0.14391-GBM
ENSG00000267106ENST00000586614CAMKK2ENSG00000110931ENST00000402834-0.14391-GBM
ENSG00000267106ENST00000586614YPEL2ENSG00000175155ENST00000585166-0.17291-GBM
ENSG00000267106ENST00000586614SEC14L1ENSG00000129657ENST00000585618-0.28511-PCPG
ENSG00000267106ENST00000586614SEC14L1ENSG00000129657ENST00000591437-0.28511-PCPG
ENSG00000267106ENST00000586614SEC14L1ENSG00000129657ENST00000431431-0.28511-PCPG
ENSG00000267106ENST00000586614SEC14L1ENSG00000129657ENST00000589202-0.4940118-PCPG
ENSG00000267106ENST00000586614SEC14L1ENSG00000129657ENST00000588488-0.28511-PCPG
ENSG00000267106ENST00000585797CAMKK2ENSG00000110931ENST00000412367-0.16481-GBM
ENSG00000267106ENST00000585797CAMKK2ENSG00000110931ENST00000404169-0.178067-GBM
ENSG00000267106ENST00000585797CAMKK2ENSG00000110931ENST00000402834-0.178067-GBM
ENSG00000267106ENST00000585797YPEL2ENSG00000175155ENST00000585166-0.18331-GBM
ENSG00000267106ENST00000585797SEC14L1ENSG00000129657ENST00000585618-0.28511-PCPG
ENSG00000267106ENST00000585797SEC14L1ENSG00000129657ENST00000431431-0.28511-PCPG
ENSG00000267106ENST00000585797SEC14L1ENSG00000129657ENST00000589202-1.2820684-PCPG
ENSG00000267106ENST00000587536CAMKK2ENSG00000110931ENST00000412367-0.24501-GBM
ENSG00000267106ENST00000587536CAMKK2ENSG00000110931ENST00000404169-0.15831-GBM
ENSG00000267106ENST00000587536CAMKK2ENSG00000110931ENST00000402834-0.15831-GBM
ENSG00000267106ENST00000587536YPEL2ENSG00000175155ENST00000585166-0.17291-GBM
ENSG00000267106ENST00000587536SEC14L1ENSG00000129657ENST00000431431-0.118220-PCPG
ENSG00000267106ENST00000587536SEC14L1ENSG00000129657ENST00000589202-1.2820749-PCPG
ENSG00000267106ENST00000591056CAMKK2ENSG00000110931ENST00000412367-0.19041-GBM
ENSG00000267106ENST00000591056CAMKK2ENSG00000110931ENST00000404169-0.178053-GBM
ENSG00000267106ENST00000591056CAMKK2ENSG00000110931ENST00000402834-0.178053-GBM
ENSG00000267106ENST00000591056YPEL2ENSG00000175155ENST00000585166-0.18331-GBM
ENSG00000267106ENST00000591056SEC14L1ENSG00000129657ENST00000585618-0.34231-PCPG
ENSG00000267106ENST00000591056SEC14L1ENSG00000129657ENST00000431431-0.34231-PCPG
ENSG00000267106ENST00000591056SEC14L1ENSG00000129657ENST00000589202-0.5350403-PCPG
ENSG00000267106ENST00000592851CAMKK2ENSG00000110931ENST00000412367-0.1176568-GBM
ENSG00000267106ENST00000592851CAMKK2ENSG00000110931ENST00000404169-0.1379334-GBM
ENSG00000267106ENST00000592851CAMKK2ENSG00000110931ENST00000402834-0.1379356-GBM
ENSG00000267106ENST00000592851YPEL2ENSG00000175155ENST00000585166-0.14781-GBM
ENSG00000267106ENST00000592851SEC14L1ENSG00000129657ENST00000431431-0.10921-PCPG
ENSG00000267106ENST00000592851SEC14L1ENSG00000129657ENST00000589202-0.3700678-PCPG
ENSG00000267106ENST00000616951CYTH1ENSG00000108669ENST00000585509-0.11341-GBM
ENSG00000267106ENST00000616951CYTH1ENSG00000108669ENST00000589297-0.11341-GBM
ENSG00000267106ENST00000616951CYTH1ENSG00000108669ENST00000591455-0.11341-GBM
ENSG00000267106ENST00000616951CYTH1ENSG00000108669ENST00000446868-0.11341-GBM
ENSG00000267106ENST00000616951CYTH1ENSG00000108669ENST00000589296-0.11341-GBM
ENSG00000267106ENST00000616951CYTH1ENSG00000108669ENST00000361101-0.11341-GBM
ENSG00000267106ENST00000616951CAMKK2ENSG00000110931ENST00000412367-0.12381-GBM
ENSG00000267106ENST00000616951CAMKK2ENSG00000110931ENST00000404169-0.19871-GBM
ENSG00000267106ENST00000616951CAMKK2ENSG00000110931ENST00000402834-0.19871-GBM
ENSG00000267106ENST00000616951PLEKHM2ENSG00000116786ENST00000375799-0.129839-GBM
ENSG00000267106ENST00000616951PLEKHM2ENSG00000116786ENST00000375793-0.129839-GBM
ENSG00000267106ENST00000616951LUZP1ENSG00000169641ENST00000314174-0.10191-GBM,PCPG
ENSG00000267106ENST00000616951YPEL2ENSG00000175155ENST00000585166-0.15641-GBM
ENSG00000267106ENST00000616951SEC14L1ENSG00000129657ENST00000591786-0.10511-PCPG
ENSG00000267106ENST00000616951SEC14L1ENSG00000129657ENST00000589202-0.494070-PCPG
ENSG00000267106ENST00000586943CAMKK2ENSG00000110931ENST00000404169-0.1391151-GBM
ENSG00000267106ENST00000586943CAMKK2ENSG00000110931ENST00000402834-0.1240350-GBM
ENSG00000267106ENST00000586943YPEL2ENSG00000175155ENST00000585166-0.10162167-GBM
ENSG00000267106ENST00000586943SEC14L1ENSG00000129657ENST00000589202-0.5771134-PCPG

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lncRNAs regulate mRNA by competing with miRNA

lncrna_miRNA
check buttonlncRNA regulates mRNA by competing the miRNA binding site with mRNA.
LncRNA Ensembl IDlncRNA-miRNA-mRNACancer Types

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lncRNA coding potential

check buttonORFfinder result for the gencode.v22.lncRNA.transcript.fa.
lncRNA Ensembl IDlncRNA ENST IDlength(AA)start at transcriptend at transcript
ENSG00000267106.4ENST00000591932.499192491
ENSG00000267106.4ENST00000588765.366675475
ENSG00000267106.4ENST00000586614.474123347
ENSG00000267106.4ENST00000585797.312448422
ENSG00000267106.4ENST00000587536.488822556
ENSG00000267106.4ENST00000591056.110436350
ENSG00000267106.4ENST00000592851.46834240
ENSG00000267106.4ENST00000616951.11046320
ENSG00000267106.4ENST00000586943.11040314