 lncRNA targets the enhancer region and positively regulates the gene expression. |
| lncRNA targets the promoter region and positively regulates the gene expression. |
| lncRNA targets the promoter region and negatively regulates the gene expression. |
| lncRNA targets the 3'UTR region and negatively regulates the mRNA. |
| Only predicted by lncTar | | ISG20,CEBPB,SLIRP,PUSL1,RNH1,KLF16,NR1H2,BATF,SPI1,LSM7 | | Exist in public source | | NA |
| lncRNA targets the skipped exon region. | | -lncRNA and exonskipping events are positively correlated. |
 |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | ORF mutation | | ENSG00000267002 | ENST00000590740 | exon_skip_328226 | chr2:101860824-101860986 | -15.62 | -0.1070 | MAP4K4 | ENST00000347699 | In-frame | | ENSG00000267002 | ENST00000590740 | exon_skip_426982 | chr4:163515312-163515461 | -17.32 | -0.1408 | TMA16 | ENST00000358572 | Frame-shift | | ENSG00000267002 | ENST00000590740 | exon_skip_62840 | chr11:70421469-70421580 | -15.39 | -0.1924 | CTTN | ENST00000301843 | In-frame | | ENSG00000267002 | ENST00000590740 | exon_skip_59439 | chr11:57737912-57738026 | -11.65 | -0.1404 | TMX2 | ENST00000278422 | In-frame | | ENSG00000267002 | ENST00000590740 | exon_skip_326009 | chr2:64581189-64581273 | -11.00 | -0.1392 | AFTPH | ENST00000238855,ENST00000409933 | In-frame | | ENSG00000267002 | ENST00000590740 | exon_skip_334374 | chr2:227347225-227347384 | -15.48 | -0.1182 | MFF | ENST00000353339 | In-frame | | ENSG00000267002 | ENST00000590740 | exon_skip_44998 | chr10:110132304-110132400 | -9.41 | -0.1543 | ADD3 | ENST00000356080 | In-frame | | ENSG00000267002 | ENST00000590740 | exon_skip_517627 | chrX:154357250-154357274 | -10.06 | -0.8383 | FLNA | ENST00000369850 | In-frame |
| -lncRNA and exonskipping events are negatively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | LOF | | ENSG00000267002 | ENST00000590740 | exon_skip_111863 | chr14:23565815-23565892 | -11.69 | -0.1745 | AP1G2 | ENST00000308724,ENST00000397120 | Frame-shift | | ENSG00000267002 | ENST00000590740 | exon_skip_114365 | chr14:74290026-74290118 | -10.43 | -0.2370 | ABCD4 | ENST00000356924 | Frame-shift | | ENSG00000267002 | ENST00000590740 | exon_skip_132563 | chr16:2527560-2527615 | -12.40 | -0.4429 | AMDHD2 | ENST00000293971 | Frame-shift | | ENSG00000267002 | ENST00000590740 | exon_skip_382458 | chr3:38131595-38131638 | -7.26 | -0.1729 | ACAA1 | ENST00000333167 | Frame-shift | | ENSG00000267002 | ENST00000590740 | exon_skip_41841 | chr10:68756272-68756483 | -20.36 | -0.1157 | CCAR1 | ENST00000265872 | Frame-shift | | ENSG00000267002 | ENST00000590740 | exon_skip_139422 | chr16:89114338-89114487 | -20.80 | -0.1691 | ACSF3 | ENST00000317447,ENST00000406948 | Frame-shift | | ENSG00000267002 | ENST00000590740 | exon_skip_106783 | chr14:55673171-55673255 | -9.15 | -0.1578 | KTN1 | ENST00000395314 | In-frame |
| lncRNA targets by miRNA. |
 |
| LncRNA Ensembl ID | miRNA ID | LncRNA ENST ID | Binding site in lncRNA | Score | Energy | Align Len | Public source | | ENSG00000267002 | hsa-mir-22 | ENST00000590740 | chr17:43164243-43164324 | 208.00 | -65.71 | 85 | NA | | ENSG00000267002 | hsa-mir-22 | ENST00000590740 | chr17:43164311-43164393 | 181.00 | -72.74 | 78 | NA | | ENSG00000267002 | hsa-mir-22 | ENST00000590740 | chr17:43164397-43164480 | 174.00 | -79.90 | 81 | NA | | ENSG00000267002 | hsa-mir-22 | ENST00000590740 | chr17:43164613-43164701 | 161.00 | -81.90 | 83 | NA | | ENSG00000267002 | hsa-mir-22 | ENST00000590740 | chr17:43164787-43164874 | 153.00 | -75.93 | 87 | NA | | ENSG00000267002 | hsa-mir-22 | ENST00000590740 | chr17:43164513-43164595 | 144.00 | -81.63 | 88 | NA | | ENSG00000267002 | hsa-mir-155 | ENST00000590740 | chr17:43164303-43164371 | 149.00 | -53.19 | 65 | NA | | ENSG00000267002 | hsa-mir-155 | ENST00000590740 | chr17:43165128-43165192 | 140.00 | -51.95 | 27 | NA | | ENSG00000267002 | hsa-mir-511 | ENST00000590740 | chr17:43164184-43164269 | 172.00 | -68.03 | 84 | NA | | ENSG00000267002 | hsa-mir-511 | ENST00000590740 | chr17:43164906-43164996 | 172.00 | -53.04 | 89 | NA | | ENSG00000267002 | hsa-mir-511 | ENST00000590740 | chr17:43164439-43164528 | 169.00 | -76.69 | 87 | NA | | ENSG00000267002 | hsa-mir-511 | ENST00000590740 | chr17:43164823-43164897 | 154.00 | -61.06 | 82 | NA | | ENSG00000267002 | hsa-mir-511 | ENST00000590740 | chr17:43165153-43165255 | 154.00 | -66.69 | 96 | NA | | ENSG00000267002 | hsa-mir-511 | ENST00000590740 | chr17:43164648-43164732 | 149.00 | -68.67 | 83 | NA | | ENSG00000267002 | hsa-mir-6892 | ENST00000590740 | chr17:43164208-43164318 | 195.00 | -111.83 | 115 | NA | | ENSG00000267002 | hsa-mir-6892 | ENST00000590740 | chr17:43164378-43164495 | 191.00 | -103.64 | 96 | NA | | ENSG00000267002 | hsa-mir-6892 | ENST00000590740 | chr17:43164873-43164987 | 186.00 | -81.05 | 115 | NA | | ENSG00000267002 | hsa-mir-6892 | ENST00000590740 | chr17:43164500-43164624 | 167.00 | -103.79 | 128 | NA | | ENSG00000267002 | hsa-mir-6892 | ENST00000590740 | chr17:43165087-43165207 | 164.00 | -88.26 | 103 | NA | | ENSG00000267002 | hsa-mir-6892 | ENST00000590740 | chr17:43164988-43165097 | 157.00 | -66.02 | 73 | NA | | ENSG00000267002 | hsa-mir-6892 | ENST00000590740 | chr17:43165190-43165309 | 154.00 | -94.78 | 101 | NA | | ENSG00000267002 | hsa-mir-501 | ENST00000590740 | chr17:43164628-43164716 | 181.00 | -83.99 | 85 | NA | | ENSG00000267002 | hsa-mir-501 | ENST00000590740 | chr17:43165233-43165320 | 181.00 | -75.47 | 84 | NA | | ENSG00000267002 | hsa-mir-501 | ENST00000590740 | chr17:43164295-43164382 | 173.00 | -75.44 | 84 | NA | | ENSG00000267002 | hsa-mir-501 | ENST00000590740 | chr17:43165131-43165219 | 158.00 | -77.57 | 89 | NA | | ENSG00000267002 | hsa-mir-501 | ENST00000590740 | chr17:43164442-43164523 | 152.00 | -83.68 | 78 | NA | | ENSG00000267002 | hsa-mir-501 | ENST00000590740 | chr17:43164732-43164807 | 150.00 | -63.06 | 76 | NA | | ENSG00000267002 | hsa-mir-501 | ENST00000590740 | chr17:43164863-43164955 | 146.00 | -67.59 | 89 | NA |
| RNA A-to-I editing events in lncRNA. |
| LncRNAediting ID | LncRNA Ensembl ID | Chromosome | Editing Position | Strand | Gene Type | Gene Name | Transcript ID | Transcript Type | Transcript Name | | LncEditing_324208 | ENSG00000267002.1 | chr17 | 43167730 | - | lincRNA | RP11-242D8.1 | ENST00000590740.1 | lincRNA | RP11-242D8.1-001 | | LncEditing_324210 | ENSG00000267002.1 | chr17 | 43167747 | - | lincRNA | RP11-242D8.1 | ENST00000590740.1 | lincRNA | RP11-242D8.1-001 | | LncEditing_324213 | ENSG00000267002.1 | chr17 | 43167773 | - | lincRNA | RP11-242D8.1 | ENST00000590740.1 | lincRNA | RP11-242D8.1-001 | | LncEditing_324215 | ENSG00000267002.1 | chr17 | 43167780 | - | lincRNA | RP11-242D8.1 | ENST00000590740.1 | lincRNA | RP11-242D8.1-001 |
| Edited-associated DElncRNAs in cancer. |
 |
| LncRNA Ensembl ID | LncRNA Index | Cancer Type | Chr_Postion_Strand | AVE1 | AVE2 | log2FC | W-value | P-value | Adjc.p-value | Change | | ENSG00000267002 | LncEditing_324215 | KIRC | chr17_43167780_- | 4.618725e+00 | 2.113909e+00 | 8.868542e-01 | 1.110768e+01 | 1.151091e-28 | 5.215004e-28 | UP | | ENSG00000267002 | LncEditing_324208 | GBM | chr17_43167730_- | 4.556007e+00 | 2.501422e+00 | 1.156041e+00 | 5.904688e+00 | 3.533145e-09 | 1.074554e-08 | UP | | ENSG00000267002 | LncEditing_324208 | LGG | chr17_43167730_- | 4.796837e+00 | 3.339023e+00 | 1.913299e+00 | 8.244354e+00 | 1.660555e-16 | 3.843777e-16 | UP | | ENSG00000267002 | LncEditing_324213 | LGG | chr17_43167773_- | 4.748809e+00 | 3.431303e+00 | 2.133064e+00 | 6.754591e+00 | 1.432387e-11 | 2.314108e-11 | UP | | ENSG00000267002 | LncEditing_324215 | LGG | chr17_43167780_- | 4.788159e+00 | 3.246963e+00 | 1.784503e+00 | 1.032285e+01 | 5.554894e-25 | 2.190925e-24 | UP | | ENSG00000267002 | LncEditing_324208 | LAML | chr17_43167730_- | 1.175840e+01 | 8.020715e+00 | 1.811958e+00 | 4.317847e+00 | 1.575584e-05 | 2.865752e-05 | UP | | ENSG00000267002 | LncEditing_324215 | LAML | chr17_43167780_- | 1.284186e+01 | 8.402763e+00 | 1.634204e+00 | 4.292067e+00 | 1.770175e-05 | 3.186831e-05 | UP | | ENSG00000267002 | LncEditing_324215 | KIRP | chr17_43167780_- | 5.601534e+00 | 2.671613e+00 | 9.362325e-01 | 7.155513e+00 | 8.336078e-13 | 2.581310e-12 | UP | | ENSG00000267002 | LncEditing_324208 | OV | chr17_43167730_- | 4.164124e+00 | 2.131115e+00 | 1.034763e+00 | 9.219708e+00 | 2.979117e-20 | 1.394045e-19 | UP | | ENSG00000267002 | LncEditing_324215 | OV | chr17_43167780_- | 4.312541e+00 | 2.232454e+00 | 1.052734e+00 | 8.202040e+00 | 2.363418e-16 | 7.354190e-16 | UP | | ENSG00000267002 | LncEditing_324208 | STAD | chr17_43167730_- | 7.010582e+00 | 3.931170e+00 | 1.198214e+00 | 7.672339e+00 | 1.688874e-14 | 3.881969e-14 | UP | | ENSG00000267002 | LncEditing_324215 | STAD | chr17_43167780_- | 7.178501e+00 | 4.258865e+00 | 1.327645e+00 | 5.639192e+00 | 1.708501e-08 | 2.391567e-08 | UP | | ENSG00000267002 | LncEditing_324215 | PRAD | chr17_43167780_- | 4.537293e+00 | 2.555971e+00 | 1.207787e+00 | 7.353307e+00 | 1.933627e-13 | 4.607958e-13 | UP | | ENSG00000267002 | LncEditing_324208 | ESCA | chr17_43167730_- | 5.392423e+00 | 2.332514e+00 | 8.270969e-01 | 7.228141e+00 | 4.896485e-13 | 2.515449e-12 | UP | | ENSG00000267002 | LncEditing_324210 | ESCA | chr17_43167747_- | 4.639440e+00 | 3.227589e+00 | 1.910242e+00 | 4.042922e+00 | 5.278908e-05 | 6.834213e-05 | UP | | ENSG00000267002 | LncEditing_324213 | ESCA | chr17_43167773_- | 5.598144e+00 | 3.122388e+00 | 1.187227e+00 | 4.286963e+00 | 1.811324e-05 | 2.463683e-05 | UP | | ENSG00000267002 | LncEditing_324215 | ESCA | chr17_43167780_- | 5.247645e+00 | 2.661886e+00 | 1.021220e+00 | 6.510617e+00 | 7.484285e-11 | 2.490010e-10 | UP |
| Correlation between RNA A-to-I editing events's frequecy and lncRNA expression. |
| LncRNA Ensembl ID | LncRNA Index | Correlation | P-value | Adjc.p-value | | ENSG00000267002 | LncEditing_324208 | -3.354358e-01 | 1.005187e-02 | 2.009555e-02 | | ENSG00000267002 | LncEditing_324208 | -3.369322e-01 | 1.615436e-03 | 1.905852e-03 | | ENSG00000267002 | LncEditing_324208 | -5.016991e-01 | 1.331827e-03 | 8.200824e-03 | | ENSG00000267002 | LncEditing_324215 | -3.650072e-01 | 3.996377e-02 | 4.271989e-02 |
| Cis-expression quantitative trait loci(cis-eQTL) of lncRNA. |
| LncRNA Ensembl ID | LncRNA Name | SNP info | Number of Positive corelated Cancer | Positive corelated Cancer | Number of Negative corelated Cancer | Negative corelated Cancer |
| lncRNA regulates differentially expressed genes by function as enhancer. |
| LncRNA Ensembl ID | PC Gene ID | PC Gene Name | Positive correlated cancers | Cancer with PC gene up-regulation | Cancer with PC gene down-regulation |
| LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type | | ENSG00000267002 | ENSG00000004534 | RBM6 | exon_skip_382458 | ENSG00000060971:chr3:38131595-38131638 | ACAA1 | ENST00000333167 | Frame-shift | SARC,SKCM,READ,OV,PAAD |
| lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region. |
| LncRNA Ensembl ID | LncRNA ENST ID | PC Gene Name | PC Gene ID | PC ENST ID | dG | nDG | Cancer with PC gene up-regulation | Cancer with PC gene Down-regulation |
| lncRNA regulates mRNA by competing the miRNA binding site with mRNA. |
| LncRNA Ensembl ID | lncRNA-miRNA-mRNA | Cancer Types | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,NR2C2 | PCPG,CHOL,UCS,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,OSGEPL1 | CHOL,MESO,UCS,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,DMTF1 | PCPG,CHOL,UCS,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,N4BP2L2 | PCPG,CHOL,UCS,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,KLHDC10 | PCPG,CHOL,THCA,MESO,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,SPIN3 | PCPG,CHOL,UCS,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,PSME3IP1 | PCPG,CHOL,THCA,MESO,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,BEX2 | PCPG,CHOL,THCA,MESO,SARC | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,MORN4 | PCPG,CHOL,THCA,MESO,UCS,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,C20orf96 | PCPG,CHOL,THCA,UCS,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,IQCE | CHOL,THCA,MESO,UCS,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,GGT7 | PCPG,CHOL,THCA,UCS,SARC | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,UBN2 | PCPG,CHOL,MESO,UCS,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,CCDC24 | CHOL,THCA,MESO,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,PNMA8A | CHOL,THCA,MESO,UCS,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,C19orf44 | CHOL,THCA,MESO,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,ZBED3 | PCPG,THCA,UVM,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,TRIM46 | PCPG,CHOL,MESO,UCS,SARC | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,LRTOMT | CHOL,THCA,MESO,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,GKAP1 | PCPG,THCA,MESO,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,DUS4L | PCPG,CHOL,THCA,MESO,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,ZC3H8 | PCPG,CHOL,THCA,UCS,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,SH2B1 | PCPG,CHOL,THCA,MESO,UCS,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,HDAC11 | CHOL,THCA,UVM,MESO,SARC | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,MYEF2 | PCPG,CHOL,UCS,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,MKS1 | CHOL,THCA,MESO,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,RAD9A | CHOL,THCA,MESO,UCS,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,OGA | PCPG,CHOL,UCS,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,COA5 | CHOL,THCA,MESO,UCS,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,TSC2 | PCPG,CHOL,THCA,UCS,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,SLC25A23 | CHOL,THCA,MESO,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,TCTN1 | CHOL,THCA,UVM,MESO,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,C14orf93 | CHOL,THCA,UCS,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,GAS8 | PCPG,CHOL,THCA,MESO,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,ZFP41 | CHOL,THCA,MESO,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,EIF2D | CHOL,THCA,UVM,MESO,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-511,IFT172 | PCPG,CHOL,THCA,MESO,UCS,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-155,IFT140 | CESC,TGCT,THCA,UCS,PAAD | | ENSG00000267002 | RP11-242D8.1,hsa-mir-155,KBTBD7 | PCPG,CESC,THCA,UCS,PAAD | | ENSG00000267002 | RP11-242D8.1,hsa-mir-155,IFT172 | PCPG,CESC,THCA,UVM,UCS | | ENSG00000267002 | RP11-242D8.1,hsa-mir-155,SALL2 | PCPG,TGCT,THCA,UCS,PAAD | | ENSG00000267002 | RP11-242D8.1,hsa-mir-155,BEX4 | PCPG,TGCT,THCA,UVM,PAAD | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,WDR33 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,RXRB | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,DDX42 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,YTHDC1 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,PM20D2 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,ZNF7 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,NAA16 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,FAM117B | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,DNMT3A | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,EIF2D | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,PAXBP1 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,RBM39 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,LUC7L3 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,ING5 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,CLK2 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,SYNGAP1 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,KHDC4 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,CEP95 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,TIA1 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,RBBP6 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,POLG2 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,RBMX | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,ARGLU1 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,FBXO46 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,RBM5 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,RCOR3 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,REV1 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,MDM4 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,POGZ | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,KANSL1L | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,THOC2 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,CTDSPL2 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,ELF2 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,N4BP2L2 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,H3-3A | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,PRPF39 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,GPALPP1 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,SREK1 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,ZBTB5 | SKCM,KICH,CHOL,SARC,KIRP | | ENSG00000267002 | RP11-242D8.1,hsa-mir-22,SMAD4 | SKCM,KICH,CHOL,SARC,KIRP |
| ORFfinder result for the gencode.v22.lncRNA.transcript.fa. |
| lncRNA Ensembl ID | lncRNA ENST ID | length(AA) | start at transcript | end at transcript | | ENSG00000267002.1 | ENST00000590740.1 | 97 | 1523 | 1230 |
|
