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lncRNA: ENSG00000266970 |
Summary for SOCS3-DT |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000266970 | Gene symbol | SOCS3-DT |
| Gene name | SOCS3 divergent transcript | |
| HGNC | 52799 | |
| Entrez ID | 101928674 | |
| Gene type | lincRNA | |
| Synonyms | SOCS3-DT|RP11-806H10.4|17q25.3 | |
| UniProtAcc |
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Structure and expression level for SOCS3-DT |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000266970 | 5.832330e+01 | 3.309598e+00 | 6.438345e-01 | 5.140448e+00 | 2.740000e-07 | 2.550000e-06 | UP | GBM |
| ENSG00000266970 | 6.578363e+01 | 1.357763e+00 | 1.708687e-01 | 7.946236e+00 | 1.920000e-15 | 1.400000e-14 | UP | LUAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for SOCS3-DT |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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