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lncRNA: ENSG00000264247

Summary for ZNF407-AS1

Gene summary

Gene information	Ensembl ID	ENSG00000264247
	Gene symbol	ZNF407-AS1
	Gene name	ZNF407 antisense RNA 1
	HGNC	44331
	Entrez ID	400657
	Gene type	lincRNA
	Synonyms	ZNF407-AS1\|LINC00909\|18q22.3
	UniProtAcc

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Structure and expression level for ZNF407-AS1

AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure.

Differentially expressed gene analysis between cancer and normal samples.

Ensembl ID

Base mean

log2FC(AD/control)

lfcSE

Stat

P-value

Adjc.p-value

DEG direction

Cancer type

Correlation between lncRNAs and cancer stages.

LncRNA Ensembl ID	Correlation	P-value	Cancer Type	Adjc.p-value
ENSG00000264247	4.720666e-01	1.060755e-03	CHOL	1.791355e-03
ENSG00000264247	-4.626524e-01	5.000672e-06	KICH	1.164896e-05
ENSG00000264247	3.160078e-01	1.000805e-10	LIHC	3.753018e-10

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lncRNA-Protein interaction for ZNF407-AS1

lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID

LncRNA ENST ID

LncRNA Name

Protein Ensembl ID

Protein Name

CatRAPID Score

Lncpro Score

UniPortID

Gene Subtype

Public source

lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000264247	ENST00000577806	LINC00909	ENSG00000084093	REST	79.52	90.4237	Q13127	TF,Epi	ChIP-seq
ENSG00000264247	ENST00000577806	LINC00909	ENSG00000117000	RLF	71.36	91.1696	Q13129	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000168152	THAP9	94.34	94.6556	Q9H5L6	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000135164	DMTF1	74.79	96.103	Q9Y222	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000115816	CEBPZ	70.03	95.8657	Q03701	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000181827	RFX7	67.27	93.0301	Q2KHR2	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000101126	ADNP	65.38	96.128	Q9H2P0	TF,Epi	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000159140	SON	56.79	95.0156	P18583	TF,RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000186416	NKRF	55.85	91.6663	O15226	TF	ENCODE
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000070476	ZXDC	53.67	94.1061	Q2QGD7	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000182568	SATB1	49.82	94.2069	Q01826	TF,Epi	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000025156	HSF2	41.64	95.4338	Q03933	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000188786	MTF1	40.82	94.5657	Q14872	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000164296	TIGD6	40.62	93.5542	Q17RP2	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000198040	ZNF84	39.44	94.9026	P51523	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000181007	ZFP82	37.18	93.713	Q8N141	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000010803	SCMH1	36.0	94.2594	Q96GD3	TF,Epi	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000105856	HBP1	34.46	93.7259	O60381	TF	ChIP-seq
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000185252	ZNF74	34.0	93.5956	Q16587	TF,RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000166432	ZMAT1	31.56	92.1106	Q5H9K5	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000143157	POGK	31.52	95.1388	Q9P215	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000186272	ZNF17	31.15	93.1717	P17021	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000123411	IKZF4	29.62	92.5861	Q9H2S9	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000172273	HINFP	27.7	94.7462	Q9BQA5	TF,Epi	ChIP-seq
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000221944	TIGD1	21.05	91.9362	Q96MW7	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000119138	KLF9	20.75	90.0621	Q13886	TF	ChIP-seq
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000135457	TFCP2	18.89	94.3467	Q12800	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000256223	ZNF10	17.18	95.0071	P21506	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000141646	SMAD4	16.8	94.0089	Q13485	TF	ChIP-seq
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000095574	IKZF5	16.17	93.3222	Q9H5V7	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000204304	PBX2	15.25	93.1305	P40425	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000113658	SMAD5	14.39	90.7365	Q99717	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000178177	LCORL	4.97	94.1714	Q8N3X6	TF	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000119403	PHF19	4.91	91.8368	Q5T6S3	TF,Epi	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000096401	CDC5L	66.76	91.8893	Q99459	TF,RBP	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000118058	KMT2A	60.65	97.7539	Q03164	TF,Epi	ChIP-seq
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000164916	FOXK1	58.74	91.4366	P85037	TF	ChIP-seq
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000166454	ATMIN	55.31	93.2638	O43313	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000080298	RFX3	54.49	92.5471	P48380	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000110851	PRDM4	54.29	92.8782	Q9UKN5	TF,Epi	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000067066	SP100	54.28	95.1978	P23497	TF,Epi	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000198205	ZXDA	53.38	91.6135	P98168	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000181827	RFX7	52.53	90.2531	Q2KHR2	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000116731	PRDM2	50.88	90.6331	Q13029	TF,Epi	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000196867	ZFP28	50.78	93.9114	Q8NHY6	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000105127	AKAP8	50.68	91.3356	O43823	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000116539	ASH1L	50.49	94.938	Q9NR48	TF,Epi	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000100426	ZBED4	50.04	90.1605	O75132	TF	ChIP-seq
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000099326	MZF1	48.68	90.9856	P28698	TF	ChIP-seq
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000036549	ZZZ3	48.13	90.3078	Q8IYH5	TF,Epi	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000084676	NCOA1	47.86	95.1579	Q15788	TF,Epi	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000177045	SIX5	47.29	90.3591	Q8N196	TF	ChIP-seq
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000076108	BAZ2A	46.91	91.8529	Q9UIF9	TF,RBP,Epi	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000125482	TTF1	46.48	94.4174	Q15361	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000198455	ZXDB	45.75	91.9046	P98169	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000147124	ZNF41	45.66	94.2853	P51814	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000168769	TET2	44.69	97.0773	Q6N021	TF,Epi	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000171634	BPTF	43.14	97.3798	Q12830	TF,Epi	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000182568	SATB1	42.51	91.2947	Q01826	TF,Epi	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000005889	ZFX	42.42	94.1573	P17010	TF	ChIP-seq
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000084093	REST	41.63	93.8656	Q13127	TF,Epi	ChIP-seq
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000156273	BACH1	40.47	93.0384	O14867	TF	ChIP-seq
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000134852	CLOCK	40.35	93.4009	O15516	TF,Epi	ChIP-seq
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000167232	ZNF91	40.06	94.3497	Q05481	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000117000	RLF	36.9	96.8409	Q13129	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000154832	CXXC1	35.01	93.2043	Q9P0U4	TF,Epi	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000196670	ZFP62	34.67	94.1668	Q8NB50	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000102974	CTCF	33.76	94.9258	P49711	TF,Epi	ChIP-seq
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000126804	ZBTB1	32.61	94.7291	Q9Y2K1	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000272333	KMT2B	32.01	90.0322	Q9UMN6	TF,Epi	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000124151	NCOA3	30.85	91.1522	Q9Y6Q9	TF,Epi	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000147789	ZNF7	30.54	92.3604	P17097	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000198040	ZNF84	29.91	92.0888	P51523	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000125812	GZF1	29.44	93.7096	Q9H116	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000146587	RBAK	28.97	93.2542	Q9NYW8	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000124459	ZNF45	28.95	93.6149	Q02386	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000065029	ZNF76	25.88	93.0917	P36508	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000215271	HOMEZ	24.57	94.6983	Q8IX15	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000168795	ZBTB5	23.8	94.7161	O15062	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000166526	ZNF3	22.35	92.162	P17036	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000164631	ZNF12	21.02	92.1851	P17014	TF	ChIP-seq
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000141644	MBD1	20.92	91.9969	Q9UIS9	TF,Epi	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000198815	FOXJ3	20.36	91.4392	Q9UPW0	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000169981	ZNF35	20.1	91.8923	P13682	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000186272	ZNF17	19.6	92.0244	P17021	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000120784	ZFP30	18.0	93.2937	Q9Y2G7	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000062194	GPBP1	17.44	91.4652	Q86WP2	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000187792	ZNF70	16.65	92.2169	Q9UC06	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000142065	ZFP14	16.19	93.1207	Q9HCL3	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000198429	ZNF69	14.44	91.1811	Q9UC07	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000181007	ZFP82	14.28	90.4884	Q8N141	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000134046	MBD2	12.82	91.9781	Q9UBB5	TF,Epi	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000141646	SMAD4	12.51	91.453	Q13485	TF	ChIP-seq
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000197951	ZNF71	12.28	93.3475	Q9NQZ8	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000196378	ZNF34	10.33	92.7218	Q8IZ26	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000105750	ZNF85	10.19	93.173	Q03923	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000186130	ZBTB6	9.85	91.3751	Q15916	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000144161	ZC3H8	9.78	90.1176	Q8N5P1	TF,RBP	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000168661	ZNF30	9.03	92.3159	P17039	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000278129	ZNF8	8.69	90.5688	P17098	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000184939	ZFP90	8.63	93.2896	Q8TF47	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000146757	ZNF92	7.36	92.8799	Q03936	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000197857	ZNF44	7.26	90.2319	P15621	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000186660	ZFP91	6.75	95.8945	Q96JP5	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000198176	TFDP1	6.68	93.4761	Q14186	TF,Epi	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000169635	HIC2	6.43	91.1035	Q96JB3	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000114126	TFDP2	6.36	93.4004	Q14188	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000167766	ZNF83	5.55	92.7926	P51522	TF	ChIP-seq
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000196233	LCOR	4.88	92.3699	Q96JN0	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000175395	ZNF25	3.99	94.0988	P17030	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000196152	ZNF79	3.15	92.273	Q15937	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000112511	PHF1	2.13	92.8497	O43189	TF,Epi	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000275111	ZNF2	2.08	93.0649	Q9BSG1	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000085274	MYNN	1.91	92.1019	Q9NPC7	TF	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000198939	ZFP2	1.14	90.5951	Q6ZN57	TF	NA

lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000056097	ZFR	75.3	93.0949	Q96KR1	RBP	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000096401	CDC5L	66.76	91.9112	Q99459	TF,RBP	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000075856	SART3	56.7	92.536	Q15020	RBP	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000004534	RBM6	55.73	93.2149	P78332	RBP	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000198000	NOL8	52.38	95.5829	Q76FK4	RBP	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000138376	BARD1	48.73	94.6841	Q99728	RBP,Epi	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000137776	SLTM	48.63	91.5748	Q9NWH9	RBP	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000076108	BAZ2A	46.91	91.7867	Q9UIF9	TF,RBP,Epi	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000162775	RBM15	44.07	93.2834	Q96T37	RBP	eCLIP,iCLIP
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000084072	PPIE	43.12	91.2089	Q9UNP9	RBP	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000100650	SRSF5	39.99	90.0653	Q13243	RBP	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000135870	RC3H1	35.08	94.0054	Q5TC82	RBP	GSE47078
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000127993	RBM48	27.51	91.2343	Q5RL73	RBP	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000099622	CIRBP	27.07	90.2568	Q14011	RBP	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000083544	TDRD3	19.47	93.2026	Q9H7E2	RBP,Epi	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000167978	SRRM2	16.36	97.8147	Q9UQ35	RBP	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000155858	LSM11	15.82	92.1465	P83369	RBP	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000139168	ZCRB1	11.12	91.1834	Q8TBF4	RBP	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000144161	ZC3H8	9.78	90.3417	Q8N5P1	TF,RBP	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000108349	CASC3	8.76	95.1911	O15234	RBP	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000121390	PSPC1	6.08	94.3292	Q8WXF1	RBP	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000161547	SRSF2	4.62	90.7304	Q01130	RBP	NA
ENSG00000264247	ENST00000581192	LINC00909	ENSG00000107164	FUBP3	2.02	91.8055	Q96I24	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000068784	SRBD1	76.82	95.8416	Q8N5C6	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000159082	SYNJ1	76.79	95.1319	O43426	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000198231	DDX42	75.8	90.4265	Q86XP3	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000213079	SCAF8	72.19	95.4901	Q9UPN6	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000104517	UBR5	70.87	96.3993	O95071	RBP,Epi	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000134815	DHX34	68.87	91.0471	Q14147	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000129566	TEP1	68.34	96.7468	Q99973	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000134698	AGO4	67.44	93.4501	Q9HCK5	RBP	GSE67990
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000165934	CPSF2	66.99	93.4318	Q9P2I0	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000136937	NCBP1	66.87	95.0431	Q09161	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000136381	IREB2	65.66	95.4087	P48200	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000125676	THOC2	65.0	96.0312	Q8NI27	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000114127	XRN1	63.9	95.8125	Q8IZH2	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000126070	AGO3	62.83	91.7175	Q9H9G7	RBP	GSE67990
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000021776	AQR	57.21	96.1908	O60306	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000159140	SON	56.79	94.9777	P18583	TF,RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000129317	PUS7L	56.42	93.5946	Q9H0K6	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000079134	THOC1	55.79	94.6621	Q96FV9	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000078269	SYNJ2	55.5	96.114	O15056	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000067596	DHX8	51.55	95.3444	Q14562	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000085872	CHERP	50.52	96.5576	Q8IWX8	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000091127	PUS7	49.69	92.9845	Q96PZ0	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000165832	TRUB1	49.2	91.3801	Q8WWH5	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000100201	DDX17	49.11	94.9205	Q92841	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000135870	RC3H1	48.33	95.4213	Q5TC82	RBP	GSE47078
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000112531	QKI	45.66	93.1879	Q96PU8	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000156304	SCAF4	45.09	96.2361	O95104	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000173933	RBM4	42.01	91.257	Q9BWF3	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000176624	MEX3C	36.53	91.9679	Q5U5Q3	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000164548	TRA2A	35.88	91.8539	Q13595	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000185252	ZNF74	34.0	93.4088	Q16587	TF,RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000162231	NXF1	33.89	91.1096	Q9UBU9	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000110367	DDX6	28.62	93.0866	P26196	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000118197	DDX59	22.6	91.8758	Q5T1V6	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000179151	EDC3	18.85	93.2808	Q96F86	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000254726	MEX3A	17.9	92.9835	A1L020	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000172795	DCP2	12.55	92.2345	Q8IU60	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000113300	CNOT6	12.52	94.7118	Q9ULM6	RBP	NA
ENSG00000264247	ENST00000580048	LINC00909	ENSG00000072756	TRNT1	10.4	94.2056	Q96Q11	RBP	NA
ENSG00000264247	ENST00000577806	LINC00909	ENSG00000130254	SAFB2	108.97	90.4704	Q14151	TF,RBP	NA
ENSG00000264247	ENST00000577806	LINC00909	ENSG00000198000	NOL8	100.33	90.3131	Q76FK4	RBP	NA
ENSG00000264247	ENST00000577806	LINC00909	ENSG00000137776	SLTM	93.55	92.5305	Q9NWH9	RBP	NA
ENSG00000264247	ENST00000577806	LINC00909	ENSG00000167978	SRRM2	30.95	92.5533	Q9UQ35	RBP	NA

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lncRNA-DNA interaction for ZNF407-AS1

lncRNA targets the enhancer region and positively regulates the gene expression.

Only predicted by TDF

ZNF30,CEBPZ,DNMT1,PUM1,XRN1,KLF9,ZNF16,ILF3,PBX2,RBM39,EDC3,KLF12,ZBTB4,MYPOP,GLYR1,CIRBP,LCORL,MZF1,NRF1,CSDE1,PHF19,RBM23,RFX5,AKAP8,ZNF2,ARID2,ZXDC,SUGP2,RARB,DMTF1,TRUB2,ELF1,VEZF1,ZNF70,BAZ2A,ZNF77,ZNF24,ZNF74,ATF6B,TBP,GABPA,IKZF5,NFKB1,ZBED4,MEF2C,KMT2B,ZBTB5,ZFP14,ZXDA,RNPC3,ZFP69,BARD1,SAFB2,NOP9,ATMIN,THOC1,ZNF25,TRNT1,PNPT1,CNOT4,AKNA,SON,CHTOP,CWC22,DDX59,LSM5,ZBED5,ZZZ3,SCAF4,CENPT,TTC14,ZBED3,RBM4,SMAD9,MEX3C,CREB1,RC3H1,SP100,ZNF44,ZNF91,SRSF4,ZFP91,RBM4B,PUS3,TIGD6,RBM26,TCFL5,ZIK1,PURB,GZF1,ADNP,NCBP1,MYEF2,TERF2,MBD1,CWC15,IKZF4,PUS7L,ASH1L,CLOCK,DHX34,CASC3,FUBP1,RBM15,ARNT2,ZFP30,SP4,PPIE,RBM43,CPSF7,MBD2,PRDM4,LIN54,UBR5,THAP9,THOC2,DDX6,USF1,TSN,CXXC1,ZBTB6,ZNF34,ZNF71,THAP6,DDX17,E2F5,CSTF1,SRRM2,PUS7,RFX7,E2F6,BRF2,AQR,ZNF22,LCOR,MECP2,PHF1,FOXJ3,PURA,THYN1,ZNF41,ZC3H8,TGIF2,TTF1,RBM41,THAP1,SART3,DZIP3,SRBD1,ILF2,IRF2,ZFP82,MEX3A,ZFP62,ZNF48,SGSM2,PAIP1,ZNF28,CPSF2,ZNF45,CELF1,SCMH1,PSPC1,KRR1,ELK4,TIGD1,RBM45,NFXL1,BACH1,PRDM2,DDX51,MBD4,AGO3,RBM18,HOMEZ,UNC50,NFIB,APEX1,SRSF2,SALL2,MYNN,TFCP2,ZMAT1,ZNF83,QKI,ZFR,ZNF3,RFX3,NXF1,ZFX,ZNF8,NAF1,ZNF18,NKRF,NR2C2,EIF2D,SYNJ1,SIX5,GPBP1,C1D,RBM6,HMGN3,ZNF14,KHDC1,RBM48,LSM11,GMEB2,PUM2,XPO1,RBM5,ELF2,SMAD4,NFYB,ZNF43,PTBP3,ZFP28,MTF1,SP3,ZNF17,SRCAP,ZNF84,DDX42,BAZ2B,RXRB,LSM1,ZHX2,TRA2A,KMT2A,PDCD4,NAIF1,ZNF69,HINFP,XPA,NR2C1,THOC7,TFDP2,ZFP3,IKZF3,TEP1,ADAT1,MAX,SFPQ,XPO5,TET2,TDRKH,RBM33,NOL8,ATF2,ZNF10

Exist in public source

lncRNA targets the promoter region and positively regulates the gene expression.

lncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for ZNF407-AS1

lncRNA targets the 3'UTR region and negatively regulates the mRNA.

Only predicted by lncTar

FOSL2,CEBPB

Exist in public source

lncRNA targets the skipped exon region.

-lncRNA and exonskipping events are positively correlated.

lncRNA and exonskipping events positive correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	ORF mutation
ENSG00000264247	ENST00000581192	exon_skip_150854	chr17:32366664-32366757	-10.27	-0.1300	ZNF207	ENST00000321233	In-frame

-lncRNA and exonskipping events are negatively correlated.

lncRNA and exonskipping events negative correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	LOF
ENSG00000264247	ENST00000581192	exon_skip_111863	chr14:23565815-23565892	-17.34	-0.3770	AP1G2	ENST00000308724,ENST00000397120	Frame-shift
ENSG00000264247	ENST00000581192	exon_skip_290158	chr17:42953723-42953778	-6.29	-0.1310	AARSD1	ENST00000427569	Frame-shift
ENSG00000264247	ENST00000581192	exon_skip_382458	chr3:38131595-38131638	-8.30	-0.2767	ACAA1	ENST00000333167	Frame-shift
ENSG00000264247	ENST00000581192	exon_skip_139422	chr16:89114338-89114487	-24.01	-0.1740	ACSF3	ENST00000317447,ENST00000406948	Frame-shift
ENSG00000264247	ENST00000581192	exon_skip_324294	chr2:27774423-27774530	-11.09	-0.1680	MRPL33	ENST00000296102	Frame-shift
ENSG00000264247	ENST00000581192	exon_skip_361485	chr21:29008239-29008307	-9.74	-0.3896	RWDD2B	ENST00000493196	Frame-shift
ENSG00000264247	ENST00000581192	exon_skip_370518	chr22:50247691-50247776	-13.23	-0.1812	HDAC10	ENST00000216271	Frame-shift
ENSG00000264247	ENST00000581192	exon_skip_494079	chr8:144099080-144099205	-17.76	-0.1558	SHARPIN	ENST00000398712	Frame-shift
ENSG00000264247	ENST00000581192	exon_skip_287763	chr17:28884224-28884315	-15.70	-0.2343	FLOT2	ENST00000394908	Frame-shift
ENSG00000264247	ENST00000581192	exon_skip_106783	chr14:55673171-55673255	-7.79	-0.1367	KTN1	ENST00000395314	In-frame
ENSG00000264247	ENST00000581192	exon_skip_356643	chr20:35632162-35632234	-10.67	-0.1778	CPNE1	ENST00000352393,ENST00000397443	In-frame
ENSG00000264247	ENST00000581192	exon_skip_374375	chr3:49675182-49675309	-21.24	-0.1770	APEH	ENST00000296456	Frame-shift
ENSG00000264247	ENST00000581192	exon_skip_516641	chrX:129493039-129493075	-4.20	-0.6000	SMARCA1	ENST00000371122	In-frame
ENSG00000264247	ENST00000581192	exon_skip_488959	chr8:27748494-27748598	-13.97	-0.2054	CCDC25	ENST00000356537	Frame-shift

lncRNA targets by miRNA.

LncRNA Ensembl ID	miRNA ID	LncRNA ENST ID	Binding site in lncRNA	Score	Energy	Align Len	Public source
ENSG00000264247	hsa-mir-365a	ENST00000580048	chr18:74594033-74594121	192.00	-65.96	87	NA
ENSG00000264247	hsa-mir-365a	ENST00000580048	chr18:74595079-74595181	177.00	-65.67	98	NA
ENSG00000264247	hsa-mir-365a	ENST00000580048	chr18:74592054-74592137	175.00	-79.69	83	NA
ENSG00000264247	hsa-mir-365a	ENST00000580048	chr18:74594401-74594489	171.00	-59.54	87	NA
ENSG00000264247	hsa-mir-365a	ENST00000580048	chr18:74594678-74594769	168.00	-73.08	90	NA
ENSG00000264247	hsa-mir-365a	ENST00000580048	chr18:74592576-74592665	161.00	-66.76	83	NA
ENSG00000264247	hsa-mir-365a	ENST00000580048	chr18:74594599-74594687	161.00	-62.97	90	NA
ENSG00000264247	hsa-mir-365a	ENST00000580048	chr18:74591848-74591941	159.00	-67.39	89	NA
ENSG00000264247	hsa-mir-365a	ENST00000580048	chr18:74593760-74593855	159.00	-64.02	85	NA
ENSG00000264247	hsa-mir-365a	ENST00000580048	chr18:74592726-74592801	156.00	-66.53	81	NA
ENSG00000264247	hsa-mir-365a	ENST00000580048	chr18:74592798-74592901	153.00	-70.92	100	NA
ENSG00000264247	hsa-mir-365a	ENST00000580048	chr18:74594261-74594338	151.00	-52.75	84	NA
ENSG00000264247	hsa-mir-365a	ENST00000580048	chr18:74594948-74595027	148.00	-68.96	84	NA
ENSG00000264247	hsa-mir-365a	ENST00000580048	chr18:74592384-74592475	144.00	-76.54	85	NA
ENSG00000264247	hsa-mir-365a	ENST00000580048	chr18:74592934-74593025	144.00	-69.23	87	NA
ENSG00000264247	hsa-mir-365a	ENST00000580048	chr18:74593369-74593452	144.00	-63.61	87	NA
ENSG00000264247	hsa-mir-365a	ENST00000580048	chr18:74593844-74593934	144.00	-60.21	84	NA
ENSG00000264247	hsa-mir-365a	ENST00000585279	chr18:74593803-74593898	159.00	-64.02	85	NA
ENSG00000264247	hsa-mir-365a	ENST00000585279	chr18:74593412-74593495	144.00	-63.61	87	NA
ENSG00000264247	hsa-mir-365a	ENST00000577806	chr18:74593226-74593309	175.00	-79.69	83	NA
ENSG00000264247	hsa-mir-365a	ENST00000577806	chr18:74593711-74593794	144.00	-63.61	87	NA
ENSG00000264247	hsa-mir-365a	ENST00000581192	chr18:74593887-74593967	159.00	-91.53	84	NA
ENSG00000264247	hsa-mir-365a	ENST00000581192	chr18:74593764-74593847	142.00	-81.90	85	NA
ENSG00000264247	hsa-mir-22	ENST00000580048	chr18:74594364-74594441	185.00	-62.89	73	NA
ENSG00000264247	hsa-mir-22	ENST00000580048	chr18:74592497-74592585	181.00	-80.96	83	NA
ENSG00000264247	hsa-mir-22	ENST00000580048	chr18:74592736-74592830	180.00	-81.24	92	NA
ENSG00000264247	hsa-mir-22	ENST00000580048	chr18:74593265-74593353	180.00	-72.25	86	NA
ENSG00000264247	hsa-mir-22	ENST00000580048	chr18:74592976-74593066	176.00	-76.75	86	NA
ENSG00000264247	hsa-mir-22	ENST00000580048	chr18:74593822-74593909	176.00	-70.87	84	NA
ENSG00000264247	hsa-mir-22	ENST00000580048	chr18:74592407-74592481	166.00	-84.65	81	NA
ENSG00000264247	hsa-mir-22	ENST00000580048	chr18:74592222-74592313	164.00	-86.67	91	NA
ENSG00000264247	hsa-mir-22	ENST00000580048	chr18:74592828-74592913	164.00	-81.51	84	NA
ENSG00000264247	hsa-mir-22	ENST00000580048	chr18:74592604-74592692	162.00	-76.91	85	NA
ENSG00000264247	hsa-mir-22	ENST00000580048	chr18:74594015-74594101	161.00	-74.35	86	NA
ENSG00000264247	hsa-mir-22	ENST00000580048	chr18:74594611-74594692	160.00	-64.51	77	NA
ENSG00000264247	hsa-mir-22	ENST00000580048	chr18:74593361-74593451	156.00	-74.88	90	NA
ENSG00000264247	hsa-mir-22	ENST00000580048	chr18:74595057-74595138	156.00	-61.52	75	NA
ENSG00000264247	hsa-mir-22	ENST00000580048	chr18:74593903-74594006	153.00	-75.18	101	NA
ENSG00000264247	hsa-mir-22	ENST00000580048	chr18:74594742-74594820	152.00	-61.95	81	NA
ENSG00000264247	hsa-mir-22	ENST00000580048	chr18:74593586-74593672	147.00	-60.94	85	NA
ENSG00000264247	hsa-mir-22	ENST00000580048	chr18:74591775-74591855	142.00	-78.39	78	NA
ENSG00000264247	hsa-mir-22	ENST00000580048	chr18:74593083-74593163	141.00	-85.98	83	NA
ENSG00000264247	hsa-mir-22	ENST00000580048	chr18:74591982-74592066	140.00	-85.49	84	NA
ENSG00000264247	hsa-mir-22	ENST00000585279	chr18:74593308-74593396	180.00	-72.25	86	NA
ENSG00000264247	hsa-mir-22	ENST00000585279	chr18:74593404-74593494	156.00	-74.88	90	NA
ENSG00000264247	hsa-mir-22	ENST00000585279	chr18:74593629-74593715	147.00	-60.94	85	NA
ENSG00000264247	hsa-mir-22	ENST00000585279	chr18:74593804-74593879	146.00	-67.04	73	NA
ENSG00000264247	hsa-mir-22	ENST00000577806	chr18:74593607-74593695	180.00	-72.25	86	NA
ENSG00000264247	hsa-mir-22	ENST00000577806	chr18:74593394-74593485	164.00	-86.67	91	NA
ENSG00000264247	hsa-mir-22	ENST00000577806	chr18:74593703-74593793	156.00	-74.88	90	NA
ENSG00000264247	hsa-mir-22	ENST00000577806	chr18:74593928-74594014	147.00	-60.94	85	NA
ENSG00000264247	hsa-mir-22	ENST00000577806	chr18:74593483-74593566	145.00	-62.90	81	NA
ENSG00000264247	hsa-mir-22	ENST00000581192	chr18:74593702-74593787	176.00	-79.74	84	NA
ENSG00000264247	hsa-mir-22	ENST00000581192	chr18:74593824-74593921	152.00	-92.99	94	NA

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Variants for ZNF407-AS1

RNA A-to-I editing events in lncRNA.

LncRNAediting ID

LncRNA Ensembl ID

Chromosome

Editing Position

Strand

Gene Type

Gene Name

Transcript ID

Transcript Type

Transcript Name

Edited-associated DElncRNAs in cancer.

LncRNA Ensembl ID

LncRNA Index

Cancer Type

Chr_Postion_Strand

AVE1

AVE2

log2FC

W-value

P-value

Adjc.p-value

Change

Correlation between RNA A-to-I editing events's frequecy and lncRNA expression.

LncRNA Ensembl ID

LncRNA Index

Correlation

P-value

Adjc.p-value

Cis-expression quantitative trait loci(cis-eQTL) of lncRNA.

LncRNA Ensembl ID

LncRNA Name

SNP info

Number of Positive corelated Cancer

Positive corelated Cancer

Number of Negative corelated Cancer

Negative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncRNA regulates differentially expressed genes by function as enhancer.

LncRNA Ensembl ID

PC Gene ID

PC Gene Name

Positive correlated cancers

Cancer with PC gene up-regulation

Cancer with PC gene down-regulation

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lncRNAs regulate the target genes through recruiting transcript factors

LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID	RBP ID	RBP Gene Name	Exon Skipping ID	Skipped Exon	EX Gene Name	EX Affected TransID	ORF_anno	Cancer Type
ENSG00000264247	ENSG00000162231	NXF1	exon_skip_382458	ENSG00000060971:chr3:38131595-38131638	ACAA1	ENST00000333167	Frame-shift	SARC,UVM,SKCM,MESO,PAAD

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.

LncRNA Ensembl ID

LncRNA ENST ID

PC Gene Name

PC Gene ID

PC ENST ID

nDG

Cancer with PC gene up-regulation

Cancer with PC gene Down-regulation

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lncRNAs regulate mRNA by competing with miRNA

lncRNA regulates mRNA by competing the miRNA binding site with mRNA.

LncRNA Ensembl ID	lncRNA-miRNA-mRNA	Cancer Types
ENSG00000264247	ZNF407-AS1,hsa-mir-22,WDR33	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,NDE1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,C19orf44	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,GGPS1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,ZHX2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,C1orf35	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,PHF2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,DDX42	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,S100PBP	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,KAT7	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,SPOP	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,COIL	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,TRMT10B	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,RBM6	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,USP21	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,YTHDC1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,CBX1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,INTS3	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,PRR14	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,C2orf68	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,PM20D2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,RPRD2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,RBBP4	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,KANSL1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,ZNF7	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,NAA16	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,FAM117B	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,SENP7	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,C17orf80	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,ACYP1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,PARP2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,LRRCC1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,RSBN1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,JPT2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,KAT2A	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,STK36	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,TSEN2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,ERCC3	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,KMT2E	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,RBM4B	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,PPOX	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,UTP11	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,RAD52	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,LBR	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,KRBOX4	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,DNMT3A	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,C17orf75	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,C2orf49	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,PCF11	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,VEZF1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,EIF2D	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,NAB1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,PAXBP1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,DCAKD	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,RBM39	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,TUBD1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,TMEM80	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,LUC7L3	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,PAGR1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,ZMYM1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,ING5	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,CLK2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,LUC7L2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,SENP6	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,HDAC1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,KHDC4	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,PHF10	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,CEP95	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,EIF4ENIF1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,FANCL	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,TIA1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,DPF2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,PTMA	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,RSBN1L	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,MSL1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,RC3H1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,ORC2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,RBBP6	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,CTPS2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,TAF7	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,SUDS3	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,POLG2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,MLLT6	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,NXF1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,NVL	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,AKAP8	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,MRPL38	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,RBMX	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,ETAA1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,HELZ	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,PMS1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,NSRP1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,ARGLU1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,FBXO46	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,PHF12	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,MSL2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,GNPAT	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,RBM45	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,RBM5	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,CXXC1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,COPS7B	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,RCOR3	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,DHRS13	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,ZMYM5	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,ANGEL2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,GPATCH8	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,MRE11	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,RABGAP1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,REV1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,EPN2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,PHIP	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,C14orf93	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,CLASP1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,RBM14	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,MDM4	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,HINFP	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,UIMC1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,MKS1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,SRRM1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,PCIF1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,PURB	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,SF3B1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,FNBP4	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,PIP4K2B	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,SRSF1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,DGCR8	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,SP1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,POGZ	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,BRD8	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,TBP	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,KANSL1L	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,THOC2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,RYK	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,CRYZL1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,CTDSPL2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,BUD13	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,IK	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,ELF2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,TMEM94	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,MUTYH	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,LYSMD1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,ZNF83	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,HMGB2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,SRRT	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,PLXNB1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,CASC3	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,GGNBP2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,ZMYM3	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,TTC13	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,H3-3A	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,PRPF39	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,PGAP2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,WBP1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,SREK1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,CAMSAP1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,EHBP1L1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,DMTF1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,ANP32E	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,EZH1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,NFRKB	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,HEXIM1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,ZBTB5	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,WDR90	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,SMAD4	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,SZT2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,CCDC14	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,CEP164	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,SKA2	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,CCHCR1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,PAXIP1	KICH,CHOL,SARC,KIRP,LIHC
ENSG00000264247	ZNF407-AS1,hsa-mir-22,KATNBL1	KICH,CHOL,SARC,KIRP,LIHC

Top

lncRNA coding potential

ORFfinder result for the gencode.v22.lncRNA.transcript.fa.

lncRNA Ensembl ID	lncRNA ENST ID	length(AA)	start at transcript	end at transcript
ENSG00000264247.1	ENST00000580048.1	76	102	329
ENSG00000264247.1	ENST00000585279.1	134	645	241
ENSG00000264247.1	ENST00000577806.1	74	306	530
ENSG00000264247.1	ENST00000581192.1	112	40	378

	lncRNA summary
	lncRNA structure and expression level
	lncRNA-Protein interaction
	lncRNA-DNA interaction
	lncRNA-RNA interaction
	Variants in lncRNA
	lncRNAs regulate the target genes through functioning as enhancers
	lncRNAs regulate the target genes through recruiting transcript factors
	lncRNAs regulate the alternative splicing events through interacting with splicing factor
	lncRNAs regulate mRNA through targeting the 3'-UTR region
	lncRNAs regulate mRNA by competing with miRNA
	lncRNA coding potential