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lncRNA: ENSG00000262370 |
Summary for RP11-473M20.9 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000262370 | Gene symbol | RP11-473M20.9 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for RP11-473M20.9 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000262370 | 8.492316e+01 | 1.318903e+00 | 1.377060e-01 | 9.577676e+00 | 9.930000e-22 | 6.580000e-21 | UP | KIRC |
| ENSG00000262370 | 5.949789e+01 | -1.386829e+00 | 1.526081e-01 | -9.087516e+00 | 1.010000e-19 | 1.000000e-18 | DOWN | LUAD |
| ENSG00000262370 | 9.195248e+01 | 2.386967e+00 | 2.695464e-01 | 8.855497e+00 | 8.330000e-19 | 1.020000e-17 | UP | COAD |
| ENSG00000262370 | 9.001943e+01 | 1.470771e+00 | 2.564304e-01 | 5.735557e+00 | 9.720000e-09 | 9.550000e-08 | UP | STAD |
| ENSG00000262370 | 1.147404e+02 | 2.999529e+00 | 4.481969e-01 | 6.692435e+00 | 2.190000e-11 | 8.130000e-10 | UP | READ |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000262370 | -3.639717e-01 | 8.531693e-20 | LUAD | 3.583311e-18 |
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lncRNA-Protein interaction for RP11-473M20.9 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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