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lncRNA: ENSG00000261175 |
Summary for LINC02188 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000261175 | Gene symbol | LINC02188 |
| Gene name | long intergenic non-protein coding RNA 2188 | |
| HGNC | 53050 | |
| Entrez ID | 102724344 | |
| Gene type | lincRNA | |
| Synonyms | LINC02188|16q24.1|CTD-2015G9.2 | |
| UniProtAcc |
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Structure and expression level for LINC02188 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000261175 | 2.527117e+02 | 5.812548e+00 | 1.035549e+00 | 5.613010e+00 | 1.990000e-08 | 1.780000e-07 | UP | CHOL |
| ENSG00000261175 | 8.144533e+02 | 3.792401e+00 | 1.563603e-01 | 2.425424e+01 | 5.970000e-130 | 2.240000e-127 | UP | KIRC |
| ENSG00000261175 | 2.606573e+02 | 2.658445e+00 | 2.974965e-01 | 8.936054e+00 | 4.030000e-19 | 8.810000e-18 | UP | KIRP |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000261175 | 3.878585e-01 | 8.474473e-03 | CHOL | 1.015247e-02 |
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lncRNA-Protein interaction for LINC02188 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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