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lncRNA: ENSG00000260911 |
Summary for RP11-196G11.2 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000260911 | Gene symbol | RP11-196G11.2 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for RP11-196G11.2 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000260911 | 2.444867e+01 | -1.363620e+00 | 4.125656e-01 | -3.305221e+00 | 9.490170e-04 | 3.603272e-03 | DOWN | GBM |
| ENSG00000260911 | 3.392859e+01 | 3.168315e+00 | 1.859552e-01 | 1.703806e+01 | 4.290000e-65 | 1.770000e-63 | UP | KIRC |
| ENSG00000260911 | 2.407526e+01 | 1.898126e+00 | 2.590369e-01 | 7.327629e+00 | 2.340000e-13 | 2.630000e-12 | UP | KIRP |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000260911 | 4.379280e-01 | 2.624501e-03 | CHOL | 3.798977e-03 |
| ENSG00000260911 | 3.610479e-01 | 3.705631e-20 | KIRC | 3.031232e-19 |
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lncRNA-Protein interaction for RP11-196G11.2 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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